Query 042426
Match_columns 270
No_of_seqs 132 out of 1943
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 06:04:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042426.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042426hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0604 Qor NADPH:quinone redu 100.0 2.3E-44 4.9E-49 297.1 25.1 254 4-267 63-326 (326)
2 COG1064 AdhP Zn-dependent alco 100.0 2.5E-44 5.5E-49 290.2 23.4 247 1-268 57-338 (339)
3 KOG1197 Predicted quinone oxid 100.0 5.9E-44 1.3E-48 270.1 20.7 258 2-270 68-333 (336)
4 PLN03154 putative allyl alcoho 100.0 6.9E-42 1.5E-46 287.2 26.8 264 5-270 81-348 (348)
5 COG2130 Putative NADP-dependen 100.0 3.2E-41 7E-46 262.0 25.5 264 4-269 75-340 (340)
6 cd08295 double_bond_reductase_ 100.0 3.4E-39 7.4E-44 270.5 27.4 262 5-267 76-338 (338)
7 KOG0023 Alcohol dehydrogenase, 100.0 8.2E-39 1.8E-43 250.4 21.0 250 1-269 65-356 (360)
8 KOG0024 Sorbitol dehydrogenase 100.0 6.4E-38 1.4E-42 246.0 21.0 246 5-268 68-353 (354)
9 cd08294 leukotriene_B4_DH_like 100.0 4.7E-37 1E-41 256.8 27.0 262 2-267 60-329 (329)
10 KOG1196 Predicted NAD-dependen 100.0 2.2E-37 4.8E-42 239.9 22.8 268 3-270 74-343 (343)
11 cd08293 PTGR2 Prostaglandin re 100.0 5E-37 1.1E-41 258.3 26.9 261 4-267 74-345 (345)
12 TIGR02825 B4_12hDH leukotriene 100.0 1.6E-36 3.4E-41 253.2 26.2 261 2-266 58-325 (325)
13 cd08281 liver_ADH_like1 Zinc-d 100.0 1.7E-36 3.8E-41 257.0 25.9 248 5-265 68-371 (371)
14 COG1062 AdhC Zn-dependent alco 100.0 5.5E-37 1.2E-41 242.8 20.1 249 5-266 62-365 (366)
15 cd08239 THR_DH_like L-threonin 100.0 6.3E-36 1.4E-40 251.0 26.0 242 5-267 61-339 (339)
16 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.2E-35 2.6E-40 250.8 25.7 248 5-266 61-357 (358)
17 cd08291 ETR_like_1 2-enoyl thi 100.0 8.2E-36 1.8E-40 248.7 24.4 249 5-266 67-324 (324)
18 PRK09880 L-idonate 5-dehydroge 100.0 2E-35 4.3E-40 248.1 24.2 239 5-267 66-343 (343)
19 PLN02827 Alcohol dehydrogenase 100.0 4.3E-35 9.3E-40 248.6 26.5 250 5-268 70-377 (378)
20 PLN02586 probable cinnamyl alc 100.0 5.5E-35 1.2E-39 246.5 24.9 242 5-268 73-354 (360)
21 PRK10309 galactitol-1-phosphat 100.0 5.3E-35 1.1E-39 246.0 24.5 251 5-267 60-346 (347)
22 KOG1198 Zinc-binding oxidoredu 100.0 2.2E-35 4.7E-40 243.8 21.5 257 4-268 71-346 (347)
23 PLN02178 cinnamyl-alcohol dehy 100.0 1.5E-34 3.3E-39 244.5 25.8 241 5-268 67-349 (375)
24 PLN02740 Alcohol dehydrogenase 100.0 1.8E-34 3.9E-39 245.4 25.7 249 5-267 72-381 (381)
25 KOG0025 Zn2+-binding dehydroge 100.0 7.4E-35 1.6E-39 224.6 20.3 253 5-267 84-352 (354)
26 TIGR02818 adh_III_F_hyde S-(hy 100.0 3.8E-34 8.3E-39 242.3 26.2 249 5-267 62-368 (368)
27 cd08292 ETR_like_2 2-enoyl thi 100.0 4E-34 8.6E-39 238.7 24.4 250 5-266 65-324 (324)
28 TIGR02822 adh_fam_2 zinc-bindi 100.0 5.6E-34 1.2E-38 237.6 25.0 234 4-265 62-328 (329)
29 cd08301 alcohol_DH_plants Plan 100.0 1.2E-33 2.6E-38 239.6 26.6 248 4-265 62-368 (369)
30 cd08300 alcohol_DH_class_III c 100.0 1.1E-33 2.4E-38 239.6 25.9 248 5-266 63-368 (368)
31 cd08233 butanediol_DH_like (2R 100.0 1.2E-33 2.5E-38 238.3 25.5 242 5-265 71-350 (351)
32 PLN02514 cinnamyl-alcohol dehy 100.0 2.2E-33 4.8E-38 236.7 25.3 243 5-269 70-352 (357)
33 TIGR03201 dearomat_had 6-hydro 100.0 2.3E-33 4.9E-38 236.2 25.1 243 5-267 60-349 (349)
34 cd08277 liver_alcohol_DH_like 100.0 4.7E-33 1E-37 235.5 26.0 246 5-265 62-364 (365)
35 KOG0022 Alcohol dehydrogenase, 100.0 2.7E-33 5.8E-38 218.6 21.3 249 5-266 68-374 (375)
36 cd08246 crotonyl_coA_red croto 100.0 1.8E-32 3.8E-37 234.4 26.4 247 5-266 88-392 (393)
37 cd08244 MDR_enoyl_red Possible 100.0 2.1E-32 4.6E-37 228.2 25.9 251 5-267 66-324 (324)
38 cd08238 sorbose_phosphate_red 100.0 1.7E-32 3.7E-37 235.2 25.6 250 5-268 69-369 (410)
39 cd08231 MDR_TM0436_like Hypoth 100.0 2E-32 4.4E-37 231.6 25.3 245 5-266 61-360 (361)
40 cd08274 MDR9 Medium chain dehy 100.0 3E-32 6.4E-37 229.7 24.9 243 5-267 84-350 (350)
41 TIGR01751 crot-CoA-red crotony 100.0 8.8E-32 1.9E-36 230.2 27.2 250 5-269 84-389 (398)
42 cd05282 ETR_like 2-enoyl thioe 100.0 3.7E-32 8.1E-37 226.6 24.0 251 5-266 63-323 (323)
43 cd08230 glucose_DH Glucose deh 100.0 3.6E-32 7.7E-37 229.5 23.8 240 4-267 63-355 (355)
44 PTZ00354 alcohol dehydrogenase 100.0 7.1E-32 1.5E-36 225.9 25.2 255 5-269 65-330 (334)
45 cd08296 CAD_like Cinnamyl alco 100.0 8.3E-32 1.8E-36 225.4 25.4 240 5-266 61-333 (333)
46 cd08290 ETR 2-enoyl thioester 100.0 5.2E-32 1.1E-36 227.5 23.7 254 4-267 69-341 (341)
47 TIGR02819 fdhA_non_GSH formald 100.0 1.4E-31 3.1E-36 227.5 26.0 251 5-268 68-391 (393)
48 cd05288 PGDH Prostaglandin deh 100.0 9.4E-32 2E-36 224.8 24.6 257 4-265 70-329 (329)
49 TIGR02817 adh_fam_1 zinc-bindi 100.0 2E-31 4.3E-36 223.5 25.0 247 4-266 64-334 (336)
50 cd05284 arabinose_DH_like D-ar 100.0 3.4E-31 7.3E-36 222.4 25.2 242 5-267 64-340 (340)
51 cd08297 CAD3 Cinnamyl alcohol 100.0 9.3E-31 2E-35 219.9 27.0 245 5-267 63-341 (341)
52 COG1063 Tdh Threonine dehydrog 100.0 6E-31 1.3E-35 220.1 25.2 248 5-267 62-350 (350)
53 cd08250 Mgc45594_like Mgc45594 100.0 6.7E-31 1.5E-35 219.7 25.5 254 5-266 67-329 (329)
54 cd08263 Zn_ADH10 Alcohol dehyd 100.0 7.4E-31 1.6E-35 222.5 26.0 248 4-266 59-367 (367)
55 cd08237 ribitol-5-phosphate_DH 100.0 2.4E-31 5.1E-36 223.0 22.5 236 2-268 59-340 (341)
56 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.3E-31 2.9E-36 221.4 20.2 228 5-266 65-308 (308)
57 cd08270 MDR4 Medium chain dehy 100.0 6.9E-31 1.5E-35 217.3 24.3 243 4-267 57-305 (305)
58 TIGR03366 HpnZ_proposed putati 100.0 3.1E-31 6.8E-36 216.5 21.9 224 5-247 5-280 (280)
59 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.3E-30 2.9E-35 219.6 25.8 244 5-266 73-349 (350)
60 PRK10754 quinone oxidoreductas 100.0 1.3E-30 2.7E-35 217.8 24.9 252 4-266 63-326 (327)
61 cd08278 benzyl_alcohol_DH Benz 100.0 1.5E-30 3.2E-35 220.3 25.6 248 5-266 62-365 (365)
62 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.3E-30 5E-35 217.8 26.6 248 4-266 60-344 (345)
63 cd08285 NADP_ADH NADP(H)-depen 100.0 1.3E-30 2.9E-35 219.7 24.8 247 5-267 60-351 (351)
64 cd05286 QOR2 Quinone oxidoredu 100.0 4.2E-30 9.2E-35 213.5 25.5 252 4-266 60-319 (320)
65 cd05278 FDH_like Formaldehyde 100.0 2.6E-30 5.7E-35 217.6 24.1 244 5-266 61-346 (347)
66 cd08243 quinone_oxidoreductase 100.0 3.4E-30 7.4E-35 214.4 24.5 247 5-265 63-319 (320)
67 KOG1202 Animal-type fatty acid 100.0 1.6E-31 3.4E-36 237.2 16.7 241 20-270 1492-1744(2376)
68 cd08283 FDH_like_1 Glutathione 100.0 6.6E-30 1.4E-34 217.7 26.1 246 4-266 60-385 (386)
69 cd08261 Zn_ADH7 Alcohol dehydr 100.0 9.5E-30 2.1E-34 213.4 26.3 243 4-267 59-337 (337)
70 cd08251 polyketide_synthase po 100.0 3.2E-30 7E-35 212.8 23.1 249 5-265 44-303 (303)
71 cd08262 Zn_ADH8 Alcohol dehydr 100.0 5.9E-30 1.3E-34 215.0 24.5 244 4-266 69-341 (341)
72 PRK09422 ethanol-active dehydr 100.0 1E-29 2.2E-34 213.3 25.9 243 5-268 60-337 (338)
73 cd08279 Zn_ADH_class_III Class 100.0 9.8E-30 2.1E-34 215.2 25.9 248 4-264 59-362 (363)
74 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 6.2E-30 1.3E-34 213.5 24.3 248 5-267 64-325 (325)
75 cd08289 MDR_yhfp_like Yhfp put 100.0 4.3E-30 9.3E-35 214.5 23.3 249 5-267 64-326 (326)
76 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.3E-29 2.8E-34 212.6 26.1 243 5-267 63-338 (338)
77 cd08236 sugar_DH NAD(P)-depend 100.0 8.9E-30 1.9E-34 214.1 24.7 249 4-265 58-343 (343)
78 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.6E-29 3.5E-34 209.8 25.8 246 5-265 58-311 (312)
79 PRK10083 putative oxidoreducta 100.0 9.6E-30 2.1E-34 213.6 24.6 243 5-269 60-339 (339)
80 cd05285 sorbitol_DH Sorbitol d 100.0 9.6E-30 2.1E-34 213.8 24.5 241 4-265 60-341 (343)
81 cd08249 enoyl_reductase_like e 100.0 6.2E-30 1.3E-34 214.6 23.0 244 5-267 61-339 (339)
82 cd08286 FDH_like_ADH2 formalde 100.0 2.4E-29 5.2E-34 211.6 26.5 244 5-267 61-345 (345)
83 cd08284 FDH_like_2 Glutathione 100.0 2.1E-29 4.5E-34 212.0 25.6 243 4-266 59-343 (344)
84 TIGR02823 oxido_YhdH putative 100.0 2.1E-29 4.6E-34 210.1 25.2 247 5-267 63-323 (323)
85 cd05279 Zn_ADH1 Liver alcohol 100.0 2.4E-29 5.2E-34 212.9 25.5 247 5-265 60-364 (365)
86 cd08253 zeta_crystallin Zeta-c 100.0 3.1E-29 6.7E-34 208.8 25.3 251 5-267 64-325 (325)
87 PRK13771 putative alcohol dehy 100.0 2.6E-29 5.7E-34 210.5 24.8 242 5-267 61-333 (334)
88 cd08276 MDR7 Medium chain dehy 100.0 3.8E-29 8.2E-34 209.6 25.8 246 5-267 64-336 (336)
89 smart00829 PKS_ER Enoylreducta 100.0 2.2E-29 4.7E-34 206.2 23.3 251 4-265 29-288 (288)
90 cd05283 CAD1 Cinnamyl alcohol 100.0 2.8E-29 6E-34 210.5 24.1 238 5-266 60-337 (337)
91 cd05276 p53_inducible_oxidored 100.0 3.2E-29 6.9E-34 208.5 24.3 250 5-265 64-323 (323)
92 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.6E-29 7.7E-34 213.2 25.0 246 5-265 94-383 (384)
93 cd08259 Zn_ADH5 Alcohol dehydr 100.0 5.4E-29 1.2E-33 208.3 25.5 242 4-266 60-332 (332)
94 cd08256 Zn_ADH2 Alcohol dehydr 100.0 3.7E-29 8E-34 210.9 24.6 242 4-265 68-350 (350)
95 cd08235 iditol_2_DH_like L-idi 100.0 4.7E-29 1E-33 209.7 25.0 244 5-266 60-343 (343)
96 cd08266 Zn_ADH_like1 Alcohol d 100.0 7.7E-29 1.7E-33 208.0 26.2 247 5-267 64-342 (342)
97 cd05195 enoyl_red enoyl reduct 100.0 2.9E-29 6.2E-34 205.8 22.9 250 5-265 34-293 (293)
98 TIGR02824 quinone_pig3 putativ 100.0 8.1E-29 1.8E-33 206.4 24.9 252 5-267 64-325 (325)
99 cd08268 MDR2 Medium chain dehy 100.0 1E-28 2.3E-33 206.0 25.4 252 4-266 63-327 (328)
100 cd08282 PFDH_like Pseudomonas 100.0 1.4E-28 3E-33 209.0 26.3 251 4-267 59-375 (375)
101 cd08299 alcohol_DH_class_I_II_ 100.0 1.3E-28 2.9E-33 208.7 26.0 250 4-267 66-373 (373)
102 cd08232 idonate-5-DH L-idonate 100.0 8.8E-29 1.9E-33 207.7 24.4 241 5-267 60-339 (339)
103 TIGR00692 tdh L-threonine 3-de 100.0 1.2E-28 2.7E-33 206.8 25.2 245 4-267 61-340 (340)
104 cd08252 AL_MDR Arginate lyase 100.0 1.4E-28 3E-33 206.3 25.3 247 5-266 66-336 (336)
105 PRK05396 tdh L-threonine 3-deh 100.0 9.1E-29 2E-33 207.8 24.2 244 5-268 64-341 (341)
106 cd08247 AST1_like AST1 is a cy 100.0 1.5E-28 3.3E-33 207.3 23.8 256 5-267 65-352 (352)
107 cd05281 TDH Threonine dehydrog 100.0 2.1E-28 4.6E-33 205.5 24.2 242 5-266 64-340 (341)
108 cd08287 FDH_like_ADH3 formalde 100.0 3.9E-28 8.5E-33 204.3 25.7 245 4-266 59-344 (345)
109 PLN02702 L-idonate 5-dehydroge 100.0 5.5E-28 1.2E-32 204.7 25.1 243 4-266 79-363 (364)
110 cd08234 threonine_DH_like L-th 100.0 6.2E-28 1.3E-32 202.2 24.9 240 5-265 59-333 (334)
111 cd08273 MDR8 Medium chain dehy 100.0 3.2E-28 6.9E-33 203.7 22.6 249 5-265 64-330 (331)
112 cd08288 MDR_yhdh Yhdh putative 100.0 7.6E-28 1.7E-32 200.8 24.8 246 6-267 65-324 (324)
113 cd08272 MDR6 Medium chain dehy 100.0 8.6E-28 1.9E-32 200.4 24.7 246 5-267 64-326 (326)
114 cd08241 QOR1 Quinone oxidoredu 100.0 7.4E-28 1.6E-32 200.3 24.3 251 5-266 64-323 (323)
115 cd08264 Zn_ADH_like2 Alcohol d 100.0 7.1E-28 1.5E-32 201.1 24.1 233 5-263 61-324 (325)
116 cd08248 RTN4I1 Human Reticulon 100.0 3.8E-28 8.3E-33 204.7 21.7 253 5-266 80-350 (350)
117 cd08255 2-desacetyl-2-hydroxye 100.0 7.4E-28 1.6E-32 196.6 21.5 240 4-265 26-277 (277)
118 cd08271 MDR5 Medium chain dehy 100.0 3.7E-27 8E-32 196.6 25.9 247 5-267 63-325 (325)
119 cd08245 CAD Cinnamyl alcohol d 100.0 4.4E-27 9.6E-32 196.7 24.3 238 5-265 60-330 (330)
120 cd08275 MDR3 Medium chain dehy 100.0 7E-27 1.5E-31 195.9 24.9 256 5-267 63-337 (337)
121 cd08298 CAD2 Cinnamyl alcohol 100.0 1.2E-26 2.6E-31 194.0 24.2 232 5-265 65-329 (329)
122 cd08242 MDR_like Medium chain 100.0 7.3E-27 1.6E-31 194.5 22.6 229 4-266 56-318 (319)
123 cd08267 MDR1 Medium chain dehy 100.0 1.4E-26 3E-31 192.6 23.4 243 5-265 65-319 (319)
124 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2E-26 4.4E-31 190.6 22.9 210 5-232 62-306 (306)
125 cd05289 MDR_like_2 alcohol deh 100.0 2.3E-26 5E-31 190.3 22.9 237 5-265 66-309 (309)
126 cd05188 MDR Medium chain reduc 99.9 1.8E-25 3.8E-30 181.6 22.3 207 4-228 35-270 (271)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 2.4E-19 5.3E-24 129.6 14.1 127 92-230 1-129 (130)
128 PF13602 ADH_zinc_N_2: Zinc-bi 99.7 1E-16 2.2E-21 115.3 6.5 122 125-265 1-127 (127)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 3E-12 6.5E-17 108.2 15.2 175 68-268 188-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 5.8E-12 1.3E-16 109.0 15.2 149 78-236 162-334 (509)
131 PF11017 DUF2855: Protein of u 98.8 5.4E-07 1.2E-11 73.2 16.9 236 3-259 32-312 (314)
132 TIGR00561 pntA NAD(P) transhyd 98.7 2.3E-07 5.1E-12 80.6 11.5 103 80-184 163-288 (511)
133 COG4221 Short-chain alcohol de 98.6 4.8E-07 1.1E-11 70.2 9.2 80 81-160 6-91 (246)
134 PRK11873 arsM arsenite S-adeno 98.5 1.4E-06 3E-11 70.9 11.8 171 75-265 72-259 (272)
135 TIGR00518 alaDH alanine dehydr 98.5 5.1E-06 1.1E-10 70.4 13.5 99 81-185 167-272 (370)
136 PRK05476 S-adenosyl-L-homocyst 98.4 4.1E-06 8.9E-11 71.5 12.4 103 67-183 197-302 (425)
137 PF08240 ADH_N: Alcohol dehydr 98.4 2.6E-07 5.7E-12 64.2 3.9 42 5-47 38-109 (109)
138 COG3967 DltE Short-chain dehyd 98.4 2.8E-06 6.1E-11 64.0 8.7 78 81-159 5-87 (245)
139 TIGR00936 ahcY adenosylhomocys 98.4 9.6E-06 2.1E-10 68.9 12.6 92 78-183 192-285 (406)
140 COG0300 DltE Short-chain dehyd 98.4 3.9E-06 8.4E-11 66.9 9.6 82 79-160 4-94 (265)
141 PLN02494 adenosylhomocysteinas 98.4 8.5E-06 1.8E-10 69.9 12.0 100 69-182 241-343 (477)
142 PRK08306 dipicolinate synthase 98.3 2.4E-05 5.1E-10 64.3 13.7 93 80-183 151-244 (296)
143 PRK05786 fabG 3-ketoacyl-(acyl 98.2 1.9E-05 4E-10 62.9 11.4 104 80-183 4-138 (238)
144 PRK00517 prmA ribosomal protei 98.2 2.4E-05 5.3E-10 62.8 12.0 143 17-181 64-214 (250)
145 PRK05993 short chain dehydroge 98.2 5.3E-05 1.2E-09 61.8 12.9 79 80-159 3-85 (277)
146 PF01488 Shikimate_DH: Shikima 98.2 1.8E-05 3.9E-10 57.2 8.9 93 80-181 11-110 (135)
147 PRK12742 oxidoreductase; Provi 98.2 4.9E-05 1.1E-09 60.4 12.2 101 81-183 6-134 (237)
148 PRK08324 short chain dehydroge 98.2 2.4E-05 5.2E-10 72.0 11.5 105 80-184 421-561 (681)
149 PRK06182 short chain dehydroge 98.1 4.6E-05 9.9E-10 62.0 11.8 79 81-160 3-84 (273)
150 PRK05693 short chain dehydroge 98.1 4.8E-05 1E-09 62.0 11.8 77 82-159 2-81 (274)
151 PRK08265 short chain dehydroge 98.1 5.9E-05 1.3E-09 61.0 12.0 81 80-160 5-90 (261)
152 cd05213 NAD_bind_Glutamyl_tRNA 98.1 3.8E-05 8.3E-10 63.7 10.6 107 44-163 141-251 (311)
153 KOG1205 Predicted dehydrogenas 98.0 0.00029 6.2E-09 56.9 14.0 106 80-185 11-154 (282)
154 PF12847 Methyltransf_18: Meth 98.0 4.6E-05 9.9E-10 53.0 8.0 94 80-178 1-109 (112)
155 PRK05872 short chain dehydroge 98.0 6.1E-05 1.3E-09 62.1 10.0 81 80-160 8-95 (296)
156 PRK08339 short chain dehydroge 98.0 0.00017 3.8E-09 58.3 12.4 81 80-160 7-95 (263)
157 PRK07109 short chain dehydroge 98.0 0.00014 3.1E-09 61.0 12.2 81 80-160 7-95 (334)
158 PTZ00075 Adenosylhomocysteinas 98.0 0.00013 2.9E-09 62.9 11.4 92 78-183 251-344 (476)
159 PRK06200 2,3-dihydroxy-2,3-dih 97.9 0.0001 2.2E-09 59.7 9.8 80 80-159 5-89 (263)
160 PRK06057 short chain dehydroge 97.9 0.0001 2.3E-09 59.3 9.9 81 80-160 6-89 (255)
161 PF02826 2-Hacid_dh_C: D-isome 97.9 0.00052 1.1E-08 52.1 12.9 89 79-181 34-128 (178)
162 PRK07825 short chain dehydroge 97.9 0.00011 2.3E-09 59.9 9.6 80 81-160 5-88 (273)
163 PRK06139 short chain dehydroge 97.9 0.00012 2.7E-09 61.2 10.0 80 80-159 6-93 (330)
164 PF13460 NAD_binding_10: NADH( 97.9 0.00011 2.4E-09 55.9 9.0 92 84-183 1-100 (183)
165 PRK07060 short chain dehydroge 97.9 0.00018 4E-09 57.4 10.5 79 80-160 8-87 (245)
166 PRK06484 short chain dehydroge 97.9 0.00027 5.9E-09 63.1 12.4 105 80-184 268-404 (520)
167 PRK06198 short chain dehydroge 97.9 0.0011 2.4E-08 53.4 15.0 81 80-160 5-94 (260)
168 TIGR03325 BphB_TodD cis-2,3-di 97.9 0.00013 2.9E-09 58.9 9.5 80 80-159 4-88 (262)
169 PRK12829 short chain dehydroge 97.9 0.00013 2.9E-09 58.9 9.5 83 78-160 8-96 (264)
170 PLN03209 translocon at the inn 97.8 0.00028 6.1E-09 62.4 11.8 105 75-184 74-211 (576)
171 PRK12939 short chain dehydroge 97.8 0.00036 7.7E-09 55.9 11.7 81 80-160 6-94 (250)
172 PRK08261 fabG 3-ketoacyl-(acyl 97.8 0.00034 7.4E-09 61.3 12.5 80 80-159 209-293 (450)
173 PRK00045 hemA glutamyl-tRNA re 97.8 0.00011 2.5E-09 63.5 8.9 88 64-161 162-253 (423)
174 TIGR02853 spore_dpaA dipicolin 97.8 0.00052 1.1E-08 56.1 12.3 92 80-182 150-242 (287)
175 KOG1014 17 beta-hydroxysteroid 97.8 0.00017 3.6E-09 58.2 9.0 81 80-160 48-136 (312)
176 PLN02780 ketoreductase/ oxidor 97.8 0.00021 4.5E-09 59.6 10.1 80 80-159 52-141 (320)
177 PRK07806 short chain dehydroge 97.8 0.0005 1.1E-08 55.0 11.8 102 81-182 6-136 (248)
178 PRK11705 cyclopropane fatty ac 97.8 0.0003 6.6E-09 60.0 10.7 112 60-180 147-267 (383)
179 PF02353 CMAS: Mycolic acid cy 97.8 8.8E-05 1.9E-09 60.1 7.0 100 71-178 53-164 (273)
180 PRK07576 short chain dehydroge 97.8 0.00018 3.9E-09 58.3 8.9 80 80-159 8-95 (264)
181 COG2518 Pcm Protein-L-isoaspar 97.8 0.00026 5.7E-09 54.2 9.0 108 62-179 56-168 (209)
182 COG2230 Cfa Cyclopropane fatty 97.8 0.00022 4.7E-09 57.4 9.0 111 64-182 56-178 (283)
183 PRK06500 short chain dehydroge 97.7 0.00027 5.9E-09 56.5 9.6 80 80-160 5-90 (249)
184 PRK07062 short chain dehydroge 97.7 0.00023 4.9E-09 57.6 9.2 81 80-160 7-97 (265)
185 PRK07814 short chain dehydroge 97.7 0.0003 6.5E-09 56.9 9.7 80 80-159 9-96 (263)
186 PRK05867 short chain dehydroge 97.7 0.00024 5.3E-09 57.1 9.0 80 80-159 8-95 (253)
187 PRK06180 short chain dehydroge 97.7 0.00028 6E-09 57.6 9.5 80 81-160 4-88 (277)
188 PRK08017 oxidoreductase; Provi 97.7 0.00043 9.3E-09 55.6 10.3 77 82-159 3-83 (256)
189 KOG1209 1-Acyl dihydroxyaceton 97.7 0.00058 1.3E-08 52.1 10.0 104 81-184 7-142 (289)
190 PRK05854 short chain dehydroge 97.7 0.00039 8.5E-09 57.8 10.2 79 81-159 14-102 (313)
191 PRK07063 short chain dehydroge 97.7 0.00025 5.3E-09 57.3 8.8 80 80-159 6-95 (260)
192 PRK06196 oxidoreductase; Provi 97.7 0.00036 7.8E-09 58.1 10.0 80 80-159 25-108 (315)
193 PRK05884 short chain dehydroge 97.7 0.00039 8.4E-09 54.9 9.7 76 83-159 2-78 (223)
194 PRK06949 short chain dehydroge 97.7 0.00032 7E-09 56.4 9.4 81 80-160 8-96 (258)
195 PRK05866 short chain dehydroge 97.7 0.00024 5.2E-09 58.5 8.8 80 81-160 40-127 (293)
196 PRK07478 short chain dehydroge 97.7 0.00039 8.5E-09 55.9 9.7 80 81-160 6-93 (254)
197 PRK07890 short chain dehydroge 97.7 0.00028 6.1E-09 56.8 8.6 81 80-160 4-92 (258)
198 cd01078 NAD_bind_H4MPT_DH NADP 97.7 0.0022 4.8E-08 49.4 13.2 78 80-162 27-109 (194)
199 PRK12771 putative glutamate sy 97.7 7.6E-05 1.7E-09 67.2 5.7 97 77-180 133-253 (564)
200 PRK10538 malonic semialdehyde 97.7 0.00046 9.9E-09 55.3 9.6 78 83-160 2-84 (248)
201 PRK07231 fabG 3-ketoacyl-(acyl 97.7 0.00036 7.7E-09 55.9 9.0 80 81-160 5-91 (251)
202 PRK07831 short chain dehydroge 97.7 0.00049 1.1E-08 55.6 9.8 83 78-160 14-107 (262)
203 PRK08177 short chain dehydroge 97.6 0.00042 9E-09 54.7 9.0 78 82-160 2-81 (225)
204 PRK05717 oxidoreductase; Valid 97.6 0.0005 1.1E-08 55.3 9.4 80 81-160 10-94 (255)
205 TIGR00406 prmA ribosomal prote 97.6 0.00057 1.2E-08 56.1 9.8 96 78-181 157-260 (288)
206 PRK05876 short chain dehydroge 97.6 0.00043 9.4E-09 56.5 9.1 80 80-159 5-92 (275)
207 PRK08340 glucose-1-dehydrogena 97.6 0.00045 9.7E-09 55.8 9.1 78 83-160 2-86 (259)
208 PRK07523 gluconate 5-dehydroge 97.6 0.00049 1.1E-08 55.3 9.2 81 80-160 9-97 (255)
209 PRK07832 short chain dehydroge 97.6 0.0011 2.4E-08 53.9 11.4 78 83-160 2-88 (272)
210 PRK07024 short chain dehydroge 97.6 0.00064 1.4E-08 54.8 9.9 79 81-159 2-87 (257)
211 PRK09186 flagellin modificatio 97.6 0.00046 9.9E-09 55.5 9.0 80 80-159 3-92 (256)
212 PRK08217 fabG 3-ketoacyl-(acyl 97.6 0.00063 1.4E-08 54.5 9.8 80 80-159 4-91 (253)
213 PRK06841 short chain dehydroge 97.6 0.00057 1.2E-08 54.9 9.5 80 80-160 14-99 (255)
214 PRK07326 short chain dehydroge 97.6 0.00044 9.5E-09 54.9 8.7 80 81-160 6-92 (237)
215 PRK06128 oxidoreductase; Provi 97.6 0.0013 2.8E-08 54.3 11.7 105 80-184 54-195 (300)
216 PRK06484 short chain dehydroge 97.6 0.00047 1E-08 61.6 9.7 81 80-160 4-89 (520)
217 PRK06194 hypothetical protein; 97.6 0.00049 1.1E-08 56.4 9.1 80 81-160 6-93 (287)
218 PRK07453 protochlorophyllide o 97.6 0.00067 1.4E-08 56.7 10.0 80 80-159 5-92 (322)
219 PRK08261 fabG 3-ketoacyl-(acyl 97.6 0.00011 2.3E-09 64.4 5.4 95 74-183 27-126 (450)
220 COG2242 CobL Precorrin-6B meth 97.6 0.0015 3.3E-08 49.0 10.5 98 76-179 30-134 (187)
221 PRK00377 cbiT cobalt-precorrin 97.6 0.0029 6.3E-08 48.9 12.7 100 74-178 34-143 (198)
222 PRK07677 short chain dehydroge 97.6 0.00048 1E-08 55.3 8.6 79 81-159 1-87 (252)
223 PLN02253 xanthoxin dehydrogena 97.6 0.00074 1.6E-08 55.1 9.9 80 81-160 18-104 (280)
224 PRK12828 short chain dehydroge 97.6 0.00059 1.3E-08 54.1 9.1 80 81-160 7-92 (239)
225 PRK07904 short chain dehydroge 97.6 0.0007 1.5E-08 54.5 9.5 83 78-160 5-97 (253)
226 PRK08267 short chain dehydroge 97.6 0.00077 1.7E-08 54.4 9.7 79 82-160 2-87 (260)
227 PRK06197 short chain dehydroge 97.6 0.00077 1.7E-08 55.9 9.9 80 80-159 15-104 (306)
228 PRK06482 short chain dehydroge 97.5 0.00074 1.6E-08 55.0 9.5 79 82-160 3-86 (276)
229 PRK06953 short chain dehydroge 97.5 0.00096 2.1E-08 52.5 9.7 78 82-160 2-80 (222)
230 PRK07067 sorbitol dehydrogenas 97.5 0.00083 1.8E-08 54.1 9.5 79 81-159 6-89 (257)
231 COG1748 LYS9 Saccharopine dehy 97.5 0.00067 1.5E-08 57.3 9.1 93 82-181 2-100 (389)
232 PRK09242 tropinone reductase; 97.5 0.00068 1.5E-08 54.6 9.0 81 80-160 8-98 (257)
233 PRK08643 acetoin reductase; Va 97.5 0.00064 1.4E-08 54.7 8.8 80 81-160 2-89 (256)
234 PRK06720 hypothetical protein; 97.5 0.0013 2.8E-08 49.5 9.8 80 80-159 15-102 (169)
235 PRK08862 short chain dehydroge 97.5 0.00088 1.9E-08 53.0 9.4 80 80-159 4-92 (227)
236 PRK09072 short chain dehydroge 97.5 0.0011 2.4E-08 53.6 10.2 81 80-160 4-90 (263)
237 PRK06483 dihydromonapterin red 97.5 0.00082 1.8E-08 53.4 9.2 79 81-160 2-84 (236)
238 PRK08085 gluconate 5-dehydroge 97.5 0.00083 1.8E-08 54.0 9.3 81 80-160 8-96 (254)
239 PRK07774 short chain dehydroge 97.5 0.00077 1.7E-08 53.9 9.1 80 80-159 5-92 (250)
240 PRK08589 short chain dehydroge 97.5 0.00071 1.5E-08 55.1 8.9 80 80-160 5-92 (272)
241 TIGR01832 kduD 2-deoxy-D-gluco 97.5 0.00085 1.9E-08 53.6 9.3 80 80-160 4-90 (248)
242 PRK06914 short chain dehydroge 97.5 0.00077 1.7E-08 55.0 9.1 79 81-160 3-91 (280)
243 PRK06181 short chain dehydroge 97.5 0.0008 1.7E-08 54.4 9.1 79 82-160 2-88 (263)
244 PRK08251 short chain dehydroge 97.5 0.00084 1.8E-08 53.7 9.1 79 81-159 2-90 (248)
245 PRK08263 short chain dehydroge 97.5 0.0011 2.3E-08 54.0 9.7 80 81-160 3-87 (275)
246 PRK08213 gluconate 5-dehydroge 97.5 0.00091 2E-08 53.9 9.2 81 80-160 11-99 (259)
247 PRK08703 short chain dehydroge 97.5 0.0013 2.9E-08 52.3 10.0 80 81-160 6-97 (239)
248 PRK06138 short chain dehydroge 97.5 0.001 2.3E-08 53.2 9.4 80 81-160 5-91 (252)
249 PRK08415 enoyl-(acyl carrier p 97.5 0.00092 2E-08 54.5 9.1 104 80-183 4-146 (274)
250 PRK08594 enoyl-(acyl carrier p 97.5 0.0026 5.5E-08 51.4 11.6 105 80-184 6-151 (257)
251 PRK09291 short chain dehydroge 97.5 0.0013 2.7E-08 52.9 9.8 75 81-159 2-82 (257)
252 PRK06179 short chain dehydroge 97.5 0.00057 1.2E-08 55.5 7.8 77 81-160 4-83 (270)
253 PRK06125 short chain dehydroge 97.5 0.0018 4E-08 52.2 10.7 79 80-160 6-91 (259)
254 PRK06505 enoyl-(acyl carrier p 97.5 0.0011 2.4E-08 54.0 9.3 80 80-159 6-94 (271)
255 PRK06172 short chain dehydroge 97.4 0.0009 1.9E-08 53.7 8.7 81 80-160 6-94 (253)
256 PRK08277 D-mannonate oxidoredu 97.4 0.0012 2.7E-08 53.8 9.6 80 80-159 9-96 (278)
257 PRK07454 short chain dehydroge 97.4 0.0012 2.6E-08 52.6 9.3 81 80-160 5-93 (241)
258 PRK07035 short chain dehydroge 97.4 0.001 2.2E-08 53.3 8.9 79 81-159 8-94 (252)
259 PRK12429 3-hydroxybutyrate deh 97.4 0.0014 3E-08 52.7 9.7 79 81-159 4-90 (258)
260 PRK12936 3-ketoacyl-(acyl-carr 97.4 0.0015 3.2E-08 52.0 9.6 80 81-160 6-90 (245)
261 PRK07666 fabG 3-ketoacyl-(acyl 97.4 0.0011 2.3E-08 52.8 8.7 80 81-160 7-94 (239)
262 PRK07074 short chain dehydroge 97.4 0.0016 3.4E-08 52.4 9.8 80 81-160 2-87 (257)
263 PRK08309 short chain dehydroge 97.4 0.017 3.7E-07 43.7 14.7 91 83-174 2-99 (177)
264 PRK12937 short chain dehydroge 97.4 0.0029 6.3E-08 50.4 11.2 104 80-183 4-142 (245)
265 PRK07985 oxidoreductase; Provi 97.4 0.0021 4.5E-08 53.0 10.5 105 80-184 48-189 (294)
266 COG0686 Ald Alanine dehydrogen 97.4 0.0016 3.4E-08 52.7 9.2 97 82-184 169-272 (371)
267 PRK05875 short chain dehydroge 97.4 0.0015 3.2E-08 53.2 9.6 79 81-159 7-95 (276)
268 PRK12481 2-deoxy-D-gluconate 3 97.4 0.0013 2.9E-08 52.8 9.2 79 80-159 7-92 (251)
269 PRK08628 short chain dehydroge 97.4 0.0013 2.9E-08 52.9 9.1 78 81-159 7-92 (258)
270 TIGR01289 LPOR light-dependent 97.4 0.0019 4.2E-08 53.7 10.1 80 81-160 3-91 (314)
271 PRK13940 glutamyl-tRNA reducta 97.4 0.0022 4.7E-08 55.3 10.5 74 79-161 179-253 (414)
272 PRK07889 enoyl-(acyl carrier p 97.4 0.0013 2.8E-08 53.0 8.8 81 80-160 6-95 (256)
273 PRK06079 enoyl-(acyl carrier p 97.4 0.0013 2.9E-08 52.8 8.8 79 80-159 6-92 (252)
274 COG4122 Predicted O-methyltran 97.4 0.0042 9.1E-08 48.3 11.0 103 74-179 53-165 (219)
275 PRK12367 short chain dehydroge 97.4 0.00099 2.1E-08 53.4 7.9 73 81-160 14-89 (245)
276 PRK13394 3-hydroxybutyrate deh 97.4 0.0014 3E-08 52.8 8.9 80 81-160 7-94 (262)
277 PRK06124 gluconate 5-dehydroge 97.4 0.0021 4.5E-08 51.7 9.9 81 80-160 10-98 (256)
278 PRK12823 benD 1,6-dihydroxycyc 97.4 0.0019 4.1E-08 52.0 9.6 78 81-159 8-93 (260)
279 CHL00194 ycf39 Ycf39; Provisio 97.4 0.0023 5.1E-08 53.3 10.3 94 83-182 2-111 (317)
280 KOG1201 Hydroxysteroid 17-beta 97.3 0.0012 2.5E-08 53.2 7.9 79 80-159 37-123 (300)
281 TIGR01035 hemA glutamyl-tRNA r 97.3 0.0026 5.6E-08 55.1 10.7 75 77-161 176-251 (417)
282 PRK08159 enoyl-(acyl carrier p 97.3 0.0015 3.3E-08 53.2 8.8 82 78-159 7-97 (272)
283 PRK05653 fabG 3-ketoacyl-(acyl 97.3 0.0016 3.4E-08 51.9 8.8 80 81-160 5-92 (246)
284 PRK06935 2-deoxy-D-gluconate 3 97.3 0.0018 4E-08 52.1 9.2 80 80-160 14-101 (258)
285 PRK07791 short chain dehydroge 97.3 0.0018 3.9E-08 53.1 9.3 81 80-160 5-102 (286)
286 PRK06603 enoyl-(acyl carrier p 97.3 0.0019 4.2E-08 52.2 9.3 80 80-159 7-95 (260)
287 PRK08416 7-alpha-hydroxysteroi 97.3 0.0022 4.7E-08 51.8 9.5 80 80-159 7-96 (260)
288 PRK12826 3-ketoacyl-(acyl-carr 97.3 0.0016 3.5E-08 52.0 8.7 81 80-160 5-93 (251)
289 KOG0725 Reductases with broad 97.3 0.0015 3.2E-08 53.0 8.4 81 80-160 7-99 (270)
290 PF00106 adh_short: short chai 97.3 0.0013 2.8E-08 49.1 7.6 78 83-160 2-90 (167)
291 PRK13943 protein-L-isoaspartat 97.3 0.0045 9.7E-08 51.5 11.3 99 74-178 74-178 (322)
292 PRK07097 gluconate 5-dehydroge 97.3 0.0026 5.6E-08 51.5 9.9 81 80-160 9-97 (265)
293 PRK07533 enoyl-(acyl carrier p 97.3 0.0022 4.8E-08 51.8 9.3 104 80-183 9-151 (258)
294 PRK06114 short chain dehydroge 97.3 0.002 4.3E-08 51.8 8.9 80 81-160 8-96 (254)
295 PRK12747 short chain dehydroge 97.3 0.0049 1.1E-07 49.4 11.2 105 80-184 3-148 (252)
296 PRK07856 short chain dehydroge 97.3 0.0017 3.7E-08 52.1 8.5 75 80-159 5-84 (252)
297 PRK06101 short chain dehydroge 97.3 0.0038 8.2E-08 49.7 10.4 77 82-159 2-80 (240)
298 PRK06113 7-alpha-hydroxysteroi 97.3 0.0018 3.9E-08 52.1 8.5 80 81-160 11-98 (255)
299 PF00670 AdoHcyase_NAD: S-aden 97.3 0.005 1.1E-07 45.4 9.8 92 77-182 19-112 (162)
300 PRK06701 short chain dehydroge 97.3 0.005 1.1E-07 50.7 11.1 105 80-184 45-185 (290)
301 PF01262 AlaDh_PNT_C: Alanine 97.3 0.0025 5.4E-08 47.9 8.5 99 82-183 21-142 (168)
302 PF13561 adh_short_C2: Enoyl-( 97.2 0.0081 1.8E-07 47.9 11.9 97 88-184 1-137 (241)
303 PRK05650 short chain dehydroge 97.2 0.0023 4.9E-08 52.0 8.7 78 83-160 2-87 (270)
304 PRK07424 bifunctional sterol d 97.2 0.0032 6.9E-08 54.1 9.8 75 80-159 177-254 (406)
305 PRK06463 fabG 3-ketoacyl-(acyl 97.2 0.003 6.4E-08 50.8 9.2 79 81-160 7-89 (255)
306 PRK06077 fabG 3-ketoacyl-(acyl 97.2 0.0081 1.8E-07 48.0 11.7 103 81-184 6-144 (252)
307 PLN02476 O-methyltransferase 97.2 0.0066 1.4E-07 49.2 10.9 105 72-179 110-227 (278)
308 PRK07984 enoyl-(acyl carrier p 97.2 0.0032 7E-08 51.0 9.3 80 80-159 5-93 (262)
309 PRK08226 short chain dehydroge 97.2 0.0033 7.1E-08 50.8 9.4 80 80-159 5-91 (263)
310 PRK12384 sorbitol-6-phosphate 97.2 0.0027 5.9E-08 51.1 8.9 79 81-159 2-90 (259)
311 TIGR03206 benzo_BadH 2-hydroxy 97.2 0.0028 6E-08 50.7 8.9 79 81-159 3-89 (250)
312 PRK08690 enoyl-(acyl carrier p 97.2 0.0025 5.3E-08 51.6 8.5 81 80-160 5-94 (261)
313 KOG1210 Predicted 3-ketosphing 97.2 0.0035 7.7E-08 50.8 9.0 82 79-160 31-122 (331)
314 PRK06398 aldose dehydrogenase; 97.2 0.00088 1.9E-08 54.1 5.8 74 81-159 6-81 (258)
315 PRK05599 hypothetical protein; 97.2 0.0024 5.2E-08 51.1 8.3 77 83-160 2-87 (246)
316 PRK07069 short chain dehydroge 97.2 0.0024 5.1E-08 51.1 8.2 76 84-159 2-88 (251)
317 PRK12743 oxidoreductase; Provi 97.2 0.0033 7.1E-08 50.6 9.0 80 81-160 2-90 (256)
318 PRK13942 protein-L-isoaspartat 97.2 0.0031 6.6E-08 49.3 8.5 100 74-179 70-175 (212)
319 PRK06997 enoyl-(acyl carrier p 97.2 0.0026 5.7E-08 51.4 8.4 81 80-160 5-94 (260)
320 PRK09135 pteridine reductase; 97.1 0.0035 7.6E-08 50.0 8.9 80 80-159 5-94 (249)
321 PF01135 PCMT: Protein-L-isoas 97.1 0.0028 6.1E-08 49.3 8.0 111 60-179 54-171 (209)
322 PRK06940 short chain dehydroge 97.1 0.012 2.5E-07 48.0 12.1 100 82-183 3-128 (275)
323 PRK08993 2-deoxy-D-gluconate 3 97.1 0.0035 7.7E-08 50.3 9.0 79 81-160 10-95 (253)
324 PRK08642 fabG 3-ketoacyl-(acyl 97.1 0.0041 8.8E-08 49.8 9.3 79 81-159 5-90 (253)
325 TIGR02632 RhaD_aldol-ADH rhamn 97.1 0.0027 5.9E-08 58.5 9.0 80 81-160 414-503 (676)
326 PRK08303 short chain dehydroge 97.1 0.0041 8.9E-08 51.5 9.4 80 80-159 7-105 (305)
327 PRK08220 2,3-dihydroxybenzoate 97.1 0.0083 1.8E-07 48.0 10.9 74 81-160 8-86 (252)
328 PRK00258 aroE shikimate 5-dehy 97.1 0.0054 1.2E-07 50.1 9.8 93 80-180 122-221 (278)
329 PRK00107 gidB 16S rRNA methylt 97.1 0.008 1.7E-07 45.9 10.1 96 77-179 42-144 (187)
330 PRK07775 short chain dehydroge 97.1 0.0055 1.2E-07 49.9 9.9 80 81-160 10-97 (274)
331 PRK08945 putative oxoacyl-(acy 97.1 0.0045 9.8E-08 49.5 9.2 83 78-160 9-102 (247)
332 PRK07577 short chain dehydroge 97.1 0.0024 5.2E-08 50.5 7.4 74 81-160 3-78 (234)
333 PRK08278 short chain dehydroge 97.1 0.004 8.7E-08 50.7 8.8 81 80-160 5-100 (273)
334 TIGR01963 PHB_DH 3-hydroxybuty 97.1 0.005 1.1E-07 49.3 9.3 79 82-160 2-88 (255)
335 PRK05855 short chain dehydroge 97.1 0.0029 6.3E-08 57.2 8.7 80 81-160 315-402 (582)
336 PRK08063 enoyl-(acyl carrier p 97.1 0.0051 1.1E-07 49.2 9.2 81 80-160 3-92 (250)
337 PLN02730 enoyl-[acyl-carrier-p 97.1 0.0072 1.6E-07 50.0 10.2 38 80-118 8-47 (303)
338 PRK08264 short chain dehydroge 97.1 0.004 8.6E-08 49.4 8.5 75 80-160 5-83 (238)
339 PRK13944 protein-L-isoaspartat 97.1 0.007 1.5E-07 47.1 9.6 101 74-179 66-172 (205)
340 PRK05565 fabG 3-ketoacyl-(acyl 97.1 0.004 8.7E-08 49.6 8.5 80 81-160 5-93 (247)
341 PLN00015 protochlorophyllide r 97.1 0.0044 9.6E-08 51.4 8.9 75 85-159 1-84 (308)
342 PRK07370 enoyl-(acyl carrier p 97.0 0.0037 7.9E-08 50.5 8.2 104 80-183 5-150 (258)
343 PLN02781 Probable caffeoyl-CoA 97.0 0.011 2.4E-07 46.9 10.7 104 73-179 61-177 (234)
344 KOG1208 Dehydrogenases with di 97.0 0.0056 1.2E-07 50.7 9.3 102 80-182 34-172 (314)
345 cd01080 NAD_bind_m-THF_DH_Cycl 97.0 0.012 2.7E-07 44.0 10.3 96 59-182 22-118 (168)
346 PRK07201 short chain dehydroge 97.0 0.0051 1.1E-07 56.6 10.0 80 81-160 371-458 (657)
347 PRK06523 short chain dehydroge 97.0 0.002 4.2E-08 52.0 6.5 76 80-159 8-86 (260)
348 PRK09134 short chain dehydroge 97.0 0.0071 1.5E-07 48.7 9.7 80 80-159 8-96 (258)
349 TIGR01829 AcAcCoA_reduct aceto 97.0 0.0047 1E-07 49.1 8.5 78 83-160 2-88 (242)
350 PRK07102 short chain dehydroge 97.0 0.0056 1.2E-07 48.8 8.9 78 82-160 2-86 (243)
351 PF01596 Methyltransf_3: O-met 97.0 0.0031 6.7E-08 48.9 7.0 104 74-180 39-155 (205)
352 PLN02589 caffeoyl-CoA O-methyl 97.0 0.015 3.3E-07 46.4 11.0 102 74-178 73-188 (247)
353 PF03807 F420_oxidored: NADP o 97.0 0.023 5.1E-07 38.1 10.6 86 83-179 1-93 (96)
354 TIGR02415 23BDH acetoin reduct 97.0 0.0052 1.1E-07 49.2 8.6 78 83-160 2-87 (254)
355 PRK05557 fabG 3-ketoacyl-(acyl 97.0 0.0071 1.5E-07 48.1 9.2 80 81-160 5-93 (248)
356 PLN00141 Tic62-NAD(P)-related 97.0 0.0063 1.4E-07 48.9 8.9 100 81-183 17-134 (251)
357 KOG1200 Mitochondrial/plastidi 97.0 0.0083 1.8E-07 45.3 8.5 79 82-160 15-100 (256)
358 PRK08936 glucose-1-dehydrogena 96.9 0.0069 1.5E-07 48.9 9.0 81 80-160 6-95 (261)
359 cd01065 NAD_bind_Shikimate_DH 96.9 0.012 2.7E-07 43.3 9.7 94 79-181 17-117 (155)
360 PRK12746 short chain dehydroge 96.9 0.01 2.2E-07 47.6 9.8 80 81-160 6-100 (254)
361 TIGR00438 rrmJ cell division p 96.9 0.013 2.9E-07 44.8 10.0 98 75-180 27-146 (188)
362 TIGR01809 Shik-DH-AROM shikima 96.9 0.0058 1.3E-07 50.0 8.3 75 80-160 124-200 (282)
363 COG2910 Putative NADH-flavin r 96.9 0.012 2.5E-07 44.1 8.8 93 83-184 2-108 (211)
364 PLN02366 spermidine synthase 96.9 0.014 3E-07 48.3 10.2 98 79-179 90-205 (308)
365 TIGR00507 aroE shikimate 5-deh 96.9 0.035 7.6E-07 45.2 12.5 95 79-181 115-215 (270)
366 PRK00811 spermidine synthase; 96.9 0.012 2.6E-07 48.2 9.8 97 79-179 75-190 (283)
367 COG2519 GCD14 tRNA(1-methylade 96.9 0.018 3.9E-07 45.4 10.1 101 74-180 88-195 (256)
368 PRK06171 sorbitol-6-phosphate 96.9 0.0024 5.2E-08 51.7 5.6 76 81-160 9-87 (266)
369 PRK11207 tellurite resistance 96.9 0.009 1.9E-07 46.1 8.5 97 77-181 27-135 (197)
370 PRK12938 acetyacetyl-CoA reduc 96.9 0.0059 1.3E-07 48.7 7.8 80 81-160 3-91 (246)
371 COG2226 UbiE Methylase involve 96.9 0.023 5E-07 44.9 10.8 111 66-183 36-159 (238)
372 PTZ00098 phosphoethanolamine N 96.8 0.014 3E-07 47.3 9.9 102 74-181 46-157 (263)
373 COG0169 AroE Shikimate 5-dehyd 96.8 0.0085 1.8E-07 48.7 8.5 71 80-160 125-200 (283)
374 PRK12548 shikimate 5-dehydroge 96.8 0.011 2.4E-07 48.6 9.4 45 80-125 125-173 (289)
375 COG2227 UbiG 2-polyprenyl-3-me 96.8 0.018 3.9E-07 45.1 9.8 93 80-180 59-161 (243)
376 COG2264 PrmA Ribosomal protein 96.8 0.021 4.6E-07 46.5 10.7 149 20-183 109-266 (300)
377 PRK12935 acetoacetyl-CoA reduc 96.8 0.01 2.3E-07 47.3 9.0 80 81-160 6-94 (247)
378 PLN02657 3,8-divinyl protochlo 96.8 0.012 2.5E-07 50.7 9.6 105 78-183 57-184 (390)
379 PRK12745 3-ketoacyl-(acyl-carr 96.8 0.01 2.2E-07 47.6 8.9 79 82-160 3-90 (256)
380 PRK07041 short chain dehydroge 96.8 0.012 2.5E-07 46.5 9.0 74 85-160 1-79 (230)
381 PRK12549 shikimate 5-dehydroge 96.8 0.018 3.9E-07 47.1 10.2 71 80-159 126-201 (284)
382 TIGR00080 pimt protein-L-isoas 96.8 0.011 2.3E-07 46.4 8.6 100 74-179 71-176 (215)
383 PF02670 DXP_reductoisom: 1-de 96.8 0.047 1E-06 38.8 10.8 95 84-178 1-119 (129)
384 PRK14027 quinate/shikimate deh 96.8 0.025 5.4E-07 46.2 10.8 45 80-125 126-171 (283)
385 PF05368 NmrA: NmrA-like famil 96.7 0.013 2.9E-07 46.3 9.1 70 84-159 1-73 (233)
386 COG1052 LdhA Lactate dehydroge 96.7 0.05 1.1E-06 45.3 12.5 88 80-182 145-238 (324)
387 COG0373 HemA Glutamyl-tRNA red 96.7 0.062 1.4E-06 46.0 13.2 94 80-183 177-277 (414)
388 PRK06718 precorrin-2 dehydroge 96.7 0.0048 1E-07 47.8 6.2 89 80-179 9-99 (202)
389 PF03435 Saccharop_dh: Sacchar 96.7 0.011 2.4E-07 50.7 9.0 91 84-180 1-98 (386)
390 TIGR03589 PseB UDP-N-acetylglu 96.7 0.017 3.6E-07 48.4 9.8 75 81-160 4-84 (324)
391 PRK04148 hypothetical protein; 96.7 0.023 5E-07 40.6 9.0 47 79-128 15-61 (134)
392 PRK13243 glyoxylate reductase; 96.7 0.043 9.4E-07 46.0 12.1 88 80-182 149-242 (333)
393 PRK12550 shikimate 5-dehydroge 96.7 0.024 5.1E-07 46.1 10.2 68 78-159 119-187 (272)
394 PRK12825 fabG 3-ketoacyl-(acyl 96.7 0.013 2.9E-07 46.5 8.8 79 81-159 6-93 (249)
395 TIGR02469 CbiT precorrin-6Y C5 96.7 0.043 9.3E-07 38.5 10.6 101 74-179 13-121 (124)
396 PRK14175 bifunctional 5,10-met 96.7 0.033 7.1E-07 45.3 10.8 95 60-182 137-232 (286)
397 TIGR03840 TMPT_Se_Te thiopurin 96.7 0.028 6.1E-07 43.9 10.1 98 79-181 33-153 (213)
398 TIGR02685 pter_reduc_Leis pter 96.7 0.013 2.9E-07 47.4 8.7 79 82-160 2-94 (267)
399 TIGR02622 CDP_4_6_dhtase CDP-g 96.7 0.013 2.9E-07 49.5 8.9 77 80-159 3-84 (349)
400 PRK06719 precorrin-2 dehydroge 96.7 0.013 2.9E-07 43.4 7.8 87 80-178 12-98 (157)
401 TIGR01500 sepiapter_red sepiap 96.7 0.014 3.1E-07 46.9 8.8 43 83-125 2-48 (256)
402 PRK12744 short chain dehydroge 96.7 0.019 4.1E-07 46.2 9.4 80 81-160 8-99 (257)
403 PRK06947 glucose-1-dehydrogena 96.7 0.014 3.1E-07 46.5 8.7 78 82-159 3-89 (248)
404 PRK03369 murD UDP-N-acetylmura 96.7 0.011 2.3E-07 52.5 8.6 73 78-161 9-81 (488)
405 PLN03139 formate dehydrogenase 96.7 0.052 1.1E-06 46.3 12.3 89 80-181 198-292 (386)
406 PRK09730 putative NAD(P)-bindi 96.6 0.015 3.3E-07 46.2 8.8 78 83-160 3-89 (247)
407 PF06325 PrmA: Ribosomal prote 96.6 0.0026 5.5E-08 52.1 4.2 146 20-183 108-262 (295)
408 PRK06123 short chain dehydroge 96.6 0.022 4.9E-07 45.4 9.7 80 81-160 2-90 (248)
409 PRK07792 fabG 3-ketoacyl-(acyl 96.6 0.015 3.2E-07 48.3 8.8 81 80-160 11-99 (306)
410 PRK08618 ornithine cyclodeamin 96.6 0.028 6.1E-07 47.0 10.3 93 80-183 126-224 (325)
411 PRK12827 short chain dehydroge 96.6 0.019 4.2E-07 45.7 9.1 80 81-160 6-97 (249)
412 PLN02989 cinnamyl-alcohol dehy 96.6 0.012 2.7E-07 49.1 8.2 75 80-159 4-86 (325)
413 cd01075 NAD_bind_Leu_Phe_Val_D 96.6 0.093 2E-06 40.6 12.4 80 80-171 27-107 (200)
414 PLN02244 tocopherol O-methyltr 96.6 0.021 4.6E-07 48.1 9.5 98 79-181 117-224 (340)
415 PRK05447 1-deoxy-D-xylulose 5- 96.6 0.049 1.1E-06 46.1 11.4 98 82-179 2-121 (385)
416 TIGR01470 cysG_Nterm siroheme 96.6 0.048 1E-06 42.4 10.7 89 81-179 9-99 (205)
417 PRK07023 short chain dehydroge 96.6 0.016 3.5E-07 46.1 8.4 75 83-159 3-86 (243)
418 PLN00203 glutamyl-tRNA reducta 96.6 0.068 1.5E-06 47.5 12.7 74 81-161 266-340 (519)
419 PRK07502 cyclohexadienyl dehyd 96.5 0.036 7.9E-07 46.0 10.6 89 82-181 7-101 (307)
420 PRK07402 precorrin-6B methylas 96.5 0.14 3.1E-06 39.4 13.1 102 74-180 34-142 (196)
421 PRK12824 acetoacetyl-CoA reduc 96.5 0.019 4.2E-07 45.6 8.6 79 82-160 3-90 (245)
422 PRK07578 short chain dehydroge 96.5 0.035 7.6E-07 42.7 9.8 63 83-159 2-64 (199)
423 PRK15469 ghrA bifunctional gly 96.5 0.046 9.9E-07 45.4 10.9 88 80-182 135-228 (312)
424 PLN02928 oxidoreductase family 96.5 0.087 1.9E-06 44.5 12.6 93 80-181 158-263 (347)
425 PF02719 Polysacc_synt_2: Poly 96.5 0.017 3.7E-07 47.0 8.0 73 84-160 1-87 (293)
426 KOG1610 Corticosteroid 11-beta 96.5 0.11 2.3E-06 42.5 12.3 106 80-185 28-169 (322)
427 PRK14982 acyl-ACP reductase; P 96.5 0.03 6.5E-07 46.8 9.6 94 79-183 153-249 (340)
428 PLN02986 cinnamyl-alcohol dehy 96.5 0.017 3.8E-07 48.1 8.5 75 80-159 4-86 (322)
429 PRK08219 short chain dehydroge 96.5 0.033 7.2E-07 43.7 9.7 76 82-160 4-81 (227)
430 TIGR03649 ergot_EASG ergot alk 96.5 0.016 3.4E-07 47.5 8.0 95 83-181 1-105 (285)
431 PF08704 GCD14: tRNA methyltra 96.5 0.022 4.8E-07 45.4 8.4 106 72-180 32-146 (247)
432 PRK08655 prephenate dehydrogen 96.5 0.039 8.5E-07 48.1 10.7 45 83-127 2-46 (437)
433 PRK06924 short chain dehydroge 96.5 0.024 5.2E-07 45.3 8.9 41 82-122 2-43 (251)
434 PRK04457 spermidine synthase; 96.5 0.066 1.4E-06 43.3 11.3 96 79-178 65-175 (262)
435 PRK01581 speE spermidine synth 96.4 0.08 1.7E-06 44.6 11.8 97 79-180 149-268 (374)
436 PRK12748 3-ketoacyl-(acyl-carr 96.4 0.027 5.8E-07 45.3 9.0 34 81-114 5-40 (256)
437 PRK13255 thiopurine S-methyltr 96.4 0.017 3.6E-07 45.4 7.4 98 77-179 34-154 (218)
438 PLN02896 cinnamyl-alcohol dehy 96.4 0.025 5.4E-07 47.9 9.0 76 79-159 8-88 (353)
439 cd05311 NAD_bind_2_malic_enz N 96.4 0.069 1.5E-06 42.2 10.7 91 79-181 23-129 (226)
440 PRK08300 acetaldehyde dehydrog 96.4 0.3 6.6E-06 40.1 14.6 91 82-179 5-100 (302)
441 PF01370 Epimerase: NAD depend 96.4 0.022 4.8E-07 44.9 8.1 74 84-160 1-75 (236)
442 TIGR01830 3oxo_ACP_reduc 3-oxo 96.4 0.023 5E-07 44.9 8.2 77 84-160 1-86 (239)
443 PRK14189 bifunctional 5,10-met 96.3 0.055 1.2E-06 44.0 10.0 96 60-182 137-232 (285)
444 PLN02686 cinnamoyl-CoA reducta 96.3 0.031 6.8E-07 47.6 9.2 44 79-122 51-94 (367)
445 PRK11036 putative S-adenosyl-L 96.3 0.06 1.3E-06 43.4 10.4 96 79-179 43-148 (255)
446 PRK07574 formate dehydrogenase 96.3 0.037 8E-07 47.2 9.4 89 80-181 191-285 (385)
447 PRK12749 quinate/shikimate deh 96.3 0.049 1.1E-06 44.7 9.7 77 80-159 123-205 (288)
448 PLN00016 RNA-binding protein; 96.3 0.038 8.3E-07 47.3 9.5 96 81-182 52-166 (378)
449 PF13241 NAD_binding_7: Putati 96.3 0.0079 1.7E-07 41.1 4.2 86 80-181 6-92 (103)
450 TIGR01831 fabG_rel 3-oxoacyl-( 96.3 0.033 7.2E-07 44.1 8.5 76 84-159 1-85 (239)
451 PRK13656 trans-2-enoyl-CoA red 96.3 0.038 8.2E-07 46.9 9.0 80 79-161 39-142 (398)
452 PRK12859 3-ketoacyl-(acyl-carr 96.2 0.036 7.7E-07 44.6 8.7 80 80-159 5-105 (256)
453 PRK14191 bifunctional 5,10-met 96.2 0.087 1.9E-06 42.9 10.7 94 60-181 136-230 (285)
454 PRK00312 pcm protein-L-isoaspa 96.2 0.046 1E-06 42.7 9.0 99 74-179 72-174 (212)
455 PLN03075 nicotianamine synthas 96.2 0.061 1.3E-06 44.0 9.7 97 80-180 123-233 (296)
456 TIGR03466 HpnA hopanoid-associ 96.2 0.012 2.5E-07 49.1 5.9 71 83-159 2-73 (328)
457 COG1028 FabG Dehydrogenases wi 96.2 0.041 9E-07 43.9 8.8 81 80-160 4-96 (251)
458 PRK07340 ornithine cyclodeamin 96.2 0.13 2.9E-06 42.5 11.8 93 80-183 124-220 (304)
459 PF13659 Methyltransf_26: Meth 96.2 0.041 8.9E-07 38.3 7.7 96 81-179 1-114 (117)
460 PF02737 3HCDH_N: 3-hydroxyacy 96.2 0.11 2.5E-06 39.4 10.5 96 83-179 1-113 (180)
461 PF01210 NAD_Gly3P_dh_N: NAD-d 96.2 0.07 1.5E-06 39.5 9.2 81 83-172 1-91 (157)
462 PRK08287 cobalt-precorrin-6Y C 96.1 0.24 5.2E-06 37.8 12.5 98 74-179 25-130 (187)
463 PRK14618 NAD(P)H-dependent gly 96.1 0.08 1.7E-06 44.4 10.6 90 83-181 6-105 (328)
464 PRK08317 hypothetical protein; 96.1 0.046 9.9E-07 43.3 8.7 102 74-180 13-124 (241)
465 KOG1502 Flavonol reductase/cin 96.1 0.04 8.8E-07 45.5 8.3 74 80-159 5-87 (327)
466 TIGR00477 tehB tellurite resis 96.1 0.033 7.2E-07 42.9 7.4 96 77-181 27-134 (195)
467 KOG1207 Diacetyl reductase/L-x 96.1 0.041 8.9E-07 40.9 7.3 43 80-122 6-48 (245)
468 PF08659 KR: KR domain; Inter 96.1 0.061 1.3E-06 40.9 8.8 76 83-159 2-90 (181)
469 PRK15409 bifunctional glyoxyla 96.0 0.21 4.5E-06 41.8 12.3 88 80-182 144-238 (323)
470 PRK08410 2-hydroxyacid dehydro 96.0 0.16 3.5E-06 42.2 11.5 85 80-182 144-234 (311)
471 TIGR02992 ectoine_eutC ectoine 96.0 0.13 2.8E-06 43.1 11.0 90 80-181 128-225 (326)
472 PRK01683 trans-aconitate 2-met 96.0 0.13 2.9E-06 41.4 10.8 96 75-179 26-129 (258)
473 PLN02662 cinnamyl-alcohol dehy 96.0 0.038 8.2E-07 46.0 7.8 37 81-117 4-40 (322)
474 PF02254 TrkA_N: TrkA-N domain 95.9 0.18 3.9E-06 35.0 10.2 91 84-179 1-95 (116)
475 PLN02650 dihydroflavonol-4-red 95.9 0.053 1.2E-06 45.8 8.8 41 81-121 5-45 (351)
476 PF03446 NAD_binding_2: NAD bi 95.9 0.12 2.5E-06 38.6 9.6 86 83-181 3-95 (163)
477 COG1179 Dinucleotide-utilizing 95.9 0.11 2.4E-06 40.8 9.4 100 81-182 30-155 (263)
478 PRK10792 bifunctional 5,10-met 95.9 0.15 3.2E-06 41.5 10.6 94 60-181 138-232 (285)
479 COG0111 SerA Phosphoglycerate 95.9 0.18 4E-06 42.1 11.5 86 81-181 142-234 (324)
480 PRK14967 putative methyltransf 95.9 0.14 3.1E-06 40.3 10.4 95 76-179 32-158 (223)
481 PRK10258 biotin biosynthesis p 95.9 0.7 1.5E-05 37.0 14.6 95 78-181 40-141 (251)
482 PRK07066 3-hydroxybutyryl-CoA 95.9 0.85 1.8E-05 38.1 15.1 85 82-174 8-113 (321)
483 PLN02653 GDP-mannose 4,6-dehyd 95.8 0.027 5.8E-07 47.4 6.5 36 80-115 5-40 (340)
484 PRK06300 enoyl-(acyl carrier p 95.8 0.19 4.2E-06 41.5 11.3 34 80-113 7-42 (299)
485 PRK00536 speE spermidine synth 95.8 0.046 1E-06 44.0 7.3 96 80-179 72-170 (262)
486 PRK15181 Vi polysaccharide bio 95.8 0.057 1.2E-06 45.6 8.3 48 67-115 2-49 (348)
487 PF07991 IlvN: Acetohydroxy ac 95.8 0.2 4.4E-06 36.9 9.8 87 80-180 3-95 (165)
488 PF13847 Methyltransf_31: Meth 95.8 0.051 1.1E-06 39.9 7.0 98 79-181 2-111 (152)
489 PLN02214 cinnamoyl-CoA reducta 95.8 0.082 1.8E-06 44.6 9.1 75 80-160 9-91 (342)
490 PLN02233 ubiquinone biosynthes 95.8 0.068 1.5E-06 43.2 8.2 101 75-181 68-183 (261)
491 PF08241 Methyltransf_11: Meth 95.8 0.018 3.9E-07 38.2 4.2 82 91-178 5-95 (95)
492 PF01113 DapB_N: Dihydrodipico 95.7 0.13 2.9E-06 36.4 8.8 91 83-182 2-99 (124)
493 PRK14968 putative methyltransf 95.7 0.069 1.5E-06 40.6 7.9 44 78-124 21-64 (188)
494 TIGR00138 gidB 16S rRNA methyl 95.7 0.11 2.5E-06 39.4 8.9 92 81-179 43-141 (181)
495 PF10727 Rossmann-like: Rossma 95.7 0.033 7.2E-07 39.6 5.6 80 82-173 11-91 (127)
496 KOG1199 Short-chain alcohol de 95.7 0.06 1.3E-06 39.9 6.9 81 79-160 7-93 (260)
497 PF01209 Ubie_methyltran: ubiE 95.7 0.031 6.7E-07 44.3 5.9 101 74-182 41-155 (233)
498 PRK05562 precorrin-2 dehydroge 95.7 0.07 1.5E-06 41.8 7.7 90 80-179 24-115 (223)
499 KOG4022 Dihydropteridine reduc 95.7 0.12 2.7E-06 37.9 8.3 96 82-183 4-132 (236)
500 PRK13403 ketol-acid reductoiso 95.7 0.18 3.9E-06 41.8 10.3 86 80-179 15-105 (335)
No 1
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=2.3e-44 Score=297.06 Aligned_cols=254 Identities=29% Similarity=0.431 Sum_probs=222.0
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhc
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELC 76 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~ 76 (270)
.+++|+|+++|++|++|++||+|+++ |+|+||+.++++. ++++ |++ +++ ++|++++.++|||++++...
T Consensus 63 ~d~aG~V~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~-~~~~-P~~--ls~~eAAal~~~~~TA~~~l~~~~ 138 (326)
T COG0604 63 SEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADW-LVPL-PDG--LSFEEAAALPLAGLTAWLALFDRA 138 (326)
T ss_pred ceeEEEEEEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHH-ceeC-CCC--CCHHHHHHHHHHHHHHHHHHHHhc
Confidence 56678888899999999999999886 7999999999999 9999 999 666 59999999999999999999
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEE
Q 042426 77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYF 155 (270)
Q Consensus 77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~ 155 (270)
++++|++|||+||+|++|++++|+|+.+|+.+++++.++++.+.++ ++|++++++|++. ++.+++++.+++ ++|+|+
T Consensus 139 ~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~ 216 (326)
T COG0604 139 GLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVL 216 (326)
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEE
Confidence 9999999999999999999999999999988777777888888887 9999999999998 899999999998 999999
Q ss_pred eCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCce
Q 042426 156 ENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGKL 234 (270)
Q Consensus 156 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ 234 (270)
|++|+..+..++++|+++|+++.+|..+. ......+...++.+.+...+...... ++...+.++++.+++++|.+
T Consensus 217 D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l 292 (326)
T COG0604 217 DTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKL 292 (326)
T ss_pred ECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999763 12233446667777887777776532 24556788999999999999
Q ss_pred eeeeeeecCcccHHHHHHHHhc-CCccceEEEEe
Q 042426 235 VYVEDIAEGLEKAPSALVGIFT-GQNVGKQLVAV 267 (270)
Q Consensus 235 ~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vv~~ 267 (270)
++.++.+||+++..++..+... ++..||+|+++
T Consensus 293 ~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 293 KPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred cceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 9999999999996666555444 48999999974
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=2.5e-44 Score=290.18 Aligned_cols=247 Identities=24% Similarity=0.327 Sum_probs=221.6
Q ss_pred CCCcccceEEE---EeecCCCCCCCCCEEEe----------------------------c---ccceeeEeecCCcccee
Q 042426 1 MQPLSGYGVSK---VLDSTHPNYKKDDLVWG----------------------------L---TSWEEFSLIQSPQLLIK 46 (270)
Q Consensus 1 ~~~i~g~g~v~---~vG~~v~~~~~Gd~V~~----------------------------~---g~~~~~~~v~~~~~~~~ 46 (270)
+|.|+|+++|+ ++|++|++|++||||-. + |+|+||+++++++ +++
T Consensus 57 ~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~-~~~ 135 (339)
T COG1064 57 LPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARY-VVK 135 (339)
T ss_pred CCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHH-eEE
Confidence 47788887665 58999999999999932 1 8999999999999 999
Q ss_pred ccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 042426 47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125 (270)
Q Consensus 47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~ 125 (270)
+ |++ ++. ++|.+.|++.|.|++|. ..+++||++|+|+|+ |++|++++|+|+.+|++|+++++++++.+.++ ++
T Consensus 136 i-P~~--~d~~~aApllCaGiT~y~alk-~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~l 209 (339)
T COG1064 136 I-PEG--LDLAEAAPLLCAGITTYRALK-KANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KL 209 (339)
T ss_pred C-CCC--CChhhhhhhhcCeeeEeeehh-hcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-Hh
Confidence 9 999 555 59999999999999995 599999999999998 79999999999999999999999999999999 99
Q ss_pred CCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcce
Q 042426 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRIC 205 (270)
Q Consensus 126 g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (270)
|++++++.++. +..+.+++. +|+++|+++...++.++++|+++|+++.+|.+.. .+....+...+..++++
T Consensus 210 GAd~~i~~~~~-~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~ 280 (339)
T COG1064 210 GADHVINSSDS-DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEIS 280 (339)
T ss_pred CCcEEEEcCCc-hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeE
Confidence 99999998865 777777764 9999999997799999999999999999999641 23344667888999999
Q ss_pred eeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426 206 MEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA 268 (270)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 268 (270)
+.|+..++ +.++++++++..+|+++|.+.+.++++++++|+++|.+++..|++|+++.
T Consensus 281 i~GS~~g~-----~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 281 IVGSLVGT-----RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred EEEEecCC-----HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 99999987 68899999999999999999889999999999999999999999999875
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=5.9e-44 Score=270.12 Aligned_cols=258 Identities=24% Similarity=0.289 Sum_probs=226.7
Q ss_pred CCcccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426 2 QPLSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS 77 (270)
Q Consensus 2 ~~i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~ 77 (270)
|=+|++|+|+.||++|++|++||||+.. |.|+|+..+|... ++++ |+. +++ ++|++...++|||..+++..+
T Consensus 68 pGmEaaGvVvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~k-v~~v-pe~--i~~k~aaa~llq~lTAy~ll~e~y~ 143 (336)
T KOG1197|consen 68 PGMEAAGVVVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVK-VFKV-PEA--ITLKEAAALLLQGLTAYMLLFEAYN 143 (336)
T ss_pred CCcccceEEEEecCCccccccccEEEEeccchhhheecccccee-eccC-Ccc--cCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3378899999999999999999999876 8999999999999 9999 998 555 588888999999999999999
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEe
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFE 156 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d 156 (270)
+++|++||+|.|+||+|+++.|+++..|+.++.++++.++++.++ +.|++|.|+++.+ |+.+++.+.++| |+|+++|
T Consensus 144 vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyD 221 (336)
T KOG1197|consen 144 VKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYD 221 (336)
T ss_pred CCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeeec
Confidence 999999999999999999999999999999999999999999999 9999999999998 999999999988 9999999
Q ss_pred CCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc---ccchHHHHHHHHHHHHCCc
Q 042426 157 NVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF---YHQYPKFLELVMLAIKEGK 233 (270)
Q Consensus 157 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~ 233 (270)
.+|.+.+..++.+|++.|.+|.+|+.+. ..+++++..+--+++.+..-.+-.+ +........+++.++.+|.
T Consensus 222 svG~dt~~~sl~~Lk~~G~mVSfG~asg-----l~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~ 296 (336)
T KOG1197|consen 222 SVGKDTFAKSLAALKPMGKMVSFGNASG-----LIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGH 296 (336)
T ss_pred cccchhhHHHHHHhccCceEEEeccccC-----CCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCc
Confidence 9999999999999999999999999764 3344545555555555543333222 2233345678889999999
Q ss_pred eeeeeeeecCcccHHHHHHHHhcCCccceEEEEecCC
Q 042426 234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270 (270)
Q Consensus 234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~ 270 (270)
+++.++++||++++.+|+++++++.+.||+++...+|
T Consensus 297 lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~ 333 (336)
T KOG1197|consen 297 LKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE 333 (336)
T ss_pred cceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence 9999999999999999999999999999999987664
No 4
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6.9e-42 Score=287.16 Aligned_cols=264 Identities=64% Similarity=1.107 Sum_probs=220.7
Q ss_pred ccceEEEEeecCCCCCCCCCEEEecccceeeEeecCC--ccce--eccCCCCCccccccccCchhhhHHHHhhhhcCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSP--QLLI--KILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~--~~~~--~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
+|+|+|..+|+++++|++||+|+++|+|+||.+++++ . ++ ++ |++++.+.++|+++++++|||+++...+++++
T Consensus 81 ~~~G~v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~-~~~~~~-P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~ 158 (348)
T PLN03154 81 EGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQ-LRKIQL-QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKK 158 (348)
T ss_pred EeeEEEEEEecCCCCCCCCCEEEecCCcEEEEEEeccccc-eEEccC-cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCC
Confidence 5688999999999999999999999999999999874 3 43 44 77744332478999999999999988889999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 160 (270)
|++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++++|+++++++++..++.+.+.+.+++++|++|||+|+
T Consensus 159 g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~ 238 (348)
T PLN03154 159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGG 238 (348)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCH
Confidence 99999999999999999999999999999999999999988757999999998752267777877766689999999999
Q ss_pred chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeee
Q 042426 161 KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240 (270)
Q Consensus 161 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 240 (270)
..+..++++++++|+++.+|.........+....+...++.+++++.|+....+.....+.++++.+++++|++++.+..
T Consensus 239 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~ 318 (348)
T PLN03154 239 DMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDM 318 (348)
T ss_pred HHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceec
Confidence 89999999999999999999754321111111234566778889998887654433345678899999999999998888
Q ss_pred ecCcccHHHHHHHHhcCCccceEEEEecCC
Q 042426 241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270 (270)
Q Consensus 241 ~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~ 270 (270)
+|+++++++|++.+.+++..||+|+++++|
T Consensus 319 ~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~ 348 (348)
T PLN03154 319 SEGLESAPAALVGLFSGKNVGKQVIRVAKE 348 (348)
T ss_pred ccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence 999999999999999999999999999775
No 5
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=3.2e-41 Score=262.03 Aligned_cols=264 Identities=46% Similarity=0.812 Sum_probs=239.2
Q ss_pred cccceEEEEeecCCCCCCCCCEEEecccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcE
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEY 83 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~ 83 (270)
|.|..+...+-|+.+.|++||.|.+..+|+||.+++.+. +.|++|...+++.....|..++.|||.+|.+.++.++|++
T Consensus 75 ~~gg~V~~Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~~~-l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~Get 153 (340)
T COG2130 75 MVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISDGEG-LRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGET 153 (340)
T ss_pred eECCeeEEEEecCCCCCCCCCEEEecccceEEEeechhh-ceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCE
Confidence 445444445678899999999999999999999999999 9999767767776689999999999999999999999999
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcchH
Q 042426 84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKML 163 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~ 163 (270)
++|.+|+|++|..+.|+||..|++|+.++.++++.+++++++|.|.++||+++ ++.+.+.+.+++|+|+.||++|++.+
T Consensus 154 vvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~ 232 (340)
T COG2130 154 VVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVL 232 (340)
T ss_pred EEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHH
Confidence 99999999999999999999999999999999999999977999999999998 99999999999999999999999999
Q ss_pred HHHHHccccCCEEEEEccccccccc-CCCCccchHHHHhhcceeeeccc-cCcccchHHHHHHHHHHHHCCceeeeeeee
Q 042426 164 DAVLLNMRICGHIAVCGMISQYNIE-KPEGVHNLMQVVGKRICMEGFLA-GDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241 (270)
Q Consensus 164 ~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (270)
+..+.+|+..+|+..||..+.|+-. .+..+..+..++.+++++.|+-. .++..++.+..+++..++++|+++...+.+
T Consensus 233 DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~ 312 (340)
T COG2130 233 DAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIV 312 (340)
T ss_pred HHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeeh
Confidence 9999999999999999998887654 44456667778888999999998 455666779999999999999999998777
Q ss_pred cCcccHHHHHHHHhcCCccceEEEEecC
Q 042426 242 EGLEKAPSALVGIFTGQNVGKQLVAVAR 269 (270)
Q Consensus 242 ~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 269 (270)
-+++++++||.-+.+++..||.|+++.+
T Consensus 313 dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 313 DGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhhhccHHHHHHHhcCCccceEEEEecC
Confidence 7999999999999999999999999864
No 6
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=3.4e-39 Score=270.55 Aligned_cols=262 Identities=70% Similarity=1.179 Sum_probs=216.5
Q ss_pred ccceEEEEeecCCCCCCCCCEEEecccceeeEeecC-CccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcE
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEY 83 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~ 83 (270)
+|.|+++.+|+++++|++||+|+++|+|+||+++++ .. ++++||++++.+.++++++++++|||+++.+.+++++|++
T Consensus 76 ~g~~~~~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~-~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~ 154 (338)
T cd08295 76 TGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQD-LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGET 154 (338)
T ss_pred eccEEEEEEecCCCCCCCCCEEEecCCceeEEEecchhc-eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCE
Confidence 346788889999999999999999999999999999 78 9999446644443588999999999999988889999999
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcchH
Q 042426 84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKML 163 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~ 163 (270)
|+|+|++|++|++++|+|+.+|++|+++++++++.+.+++++|+++++++.+..++.+.+.+.+++++|++||++|+..+
T Consensus 155 VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~ 234 (338)
T cd08295 155 VFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKML 234 (338)
T ss_pred EEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHH
Confidence 99999999999999999999999999999999999999833999999987642267777877765689999999999899
Q ss_pred HHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecC
Q 042426 164 DAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEG 243 (270)
Q Consensus 164 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 243 (270)
..++++++++|+++.+|..............+...+..+++++.++..........+.++++.+++.+|++++.+...|+
T Consensus 235 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~ 314 (338)
T cd08295 235 DAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADG 314 (338)
T ss_pred HHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccC
Confidence 99999999999999998754321100001123455666777887765544333345678899999999999988777899
Q ss_pred cccHHHHHHHHhcCCccceEEEEe
Q 042426 244 LEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 244 ~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
++++++|++.+++++..||+|+++
T Consensus 315 l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 315 LESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHHhcCCCCceEEEEC
Confidence 999999999999999999999874
No 7
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.2e-39 Score=250.45 Aligned_cols=250 Identities=20% Similarity=0.257 Sum_probs=216.1
Q ss_pred CCCcccce---EEEEeecCCCCCCCCCEEE------------------------------ec--------ccceeeEeec
Q 042426 1 MQPLSGYG---VSKVLDSTHPNYKKDDLVW------------------------------GL--------TSWEEFSLIQ 39 (270)
Q Consensus 1 ~~~i~g~g---~v~~vG~~v~~~~~Gd~V~------------------------------~~--------g~~~~~~~v~ 39 (270)
.|.|+|++ +|++||++|++|++||+|= ++ |+|++|++++
T Consensus 65 ~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~ 144 (360)
T KOG0023|consen 65 YPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVD 144 (360)
T ss_pred CCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEe
Confidence 36777665 5566899999999999991 00 6699999999
Q ss_pred CCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 042426 40 SPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119 (270)
Q Consensus 40 ~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~ 119 (270)
+.+ ++++ |+++|+. ++|.|.|++.|.|.+| ...++.||+++.|.|+ |++|.+++|+|+++|.+|++++++..+.+
T Consensus 145 ~~~-a~kI-P~~~pl~-~aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kke 219 (360)
T KOG0023|consen 145 EVF-AIKI-PENLPLA-SAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKE 219 (360)
T ss_pred eee-EEEC-CCCCChh-hccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHH
Confidence 999 9999 9996666 6999999999999999 5678999999999998 66999999999999999999999985555
Q ss_pred HHHHHhCCCceeecC-CchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHH
Q 042426 120 LLKHKFGFDDAFNYK-EEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQ 198 (270)
Q Consensus 120 ~~~~~~g~~~vi~~~-~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 198 (270)
.+-+.+|++..++.. ++ ++.+.+.+.+++++|-+.+. ....++.++.+++++|++|.+|.+.. ...++...
T Consensus 220 ea~~~LGAd~fv~~~~d~-d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~ 291 (360)
T KOG0023|consen 220 EAIKSLGADVFVDSTEDP-DIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFP 291 (360)
T ss_pred HHHHhcCcceeEEecCCH-HHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchh
Confidence 555489999888888 55 89999999887777777766 44688999999999999999999652 44566778
Q ss_pred HHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426 199 VVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR 269 (270)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 269 (270)
+..+.+++.|+..++ +...++++++..++.+++.+ +..+++++++|+++|.+++..+|.||+++.
T Consensus 292 lil~~~~I~GS~vG~-----~ket~E~Ldf~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 292 LILGRKSIKGSIVGS-----RKETQEALDFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred hhcccEEEEeecccc-----HHHHHHHHHHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 888999999999988 67889999999999999988 678999999999999999999999999864
No 8
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.4e-38 Score=246.02 Aligned_cols=246 Identities=20% Similarity=0.226 Sum_probs=211.0
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe------------------------c-------ccceeeEeecCCccceeccCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------L-------TSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------~-------g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
|.+|+|.|+|++|+++|+||||.. + |++++|++++++. |+|+ |++
T Consensus 68 EssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~df-c~KL-Pd~-- 143 (354)
T KOG0024|consen 68 ESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADF-CYKL-PDN-- 143 (354)
T ss_pred ccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHh-eeeC-CCC--
Confidence 456889999999999999999931 1 8999999999999 9999 999
Q ss_pred ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceee
Q 042426 54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
.+++.++|..+++++|++. +++++++|+++||+|| |++|+.+...|+.+|+ +|+++.-.+.+++.++ ++|++.+.+
T Consensus 144 vs~eeGAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~ 220 (354)
T KOG0024|consen 144 VSFEEGALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDP 220 (354)
T ss_pred Cchhhcccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEee
Confidence 7777889999999999999 6799999999999998 9999999999999999 9999999999999999 799987765
Q ss_pred cCCc---hhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceee
Q 042426 133 YKEE---PDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICME 207 (270)
Q Consensus 133 ~~~~---~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (270)
.... +++.+.+.+..++ .+|+.|||+|.. .++.++..++.+|+++..|+.. +...++......+++.+.
T Consensus 221 ~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~------~~~~fpi~~v~~kE~~~~ 294 (354)
T KOG0024|consen 221 SSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA------EEIQFPIIDVALKEVDLR 294 (354)
T ss_pred ccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC------CccccChhhhhhheeeee
Confidence 5553 1444555555554 799999999974 8899999999999999998854 445577788889999998
Q ss_pred eccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCc-cceEEEEec
Q 042426 208 GFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQN-VGKQLVAVA 268 (270)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~~ 268 (270)
|+.... ...++.+++++.+|++. +.++..|++++..+||+.+++++. .-|+++..+
T Consensus 295 g~fry~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 295 GSFRYC-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred eeeeec-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 887644 45799999999999874 578899999999999999998874 458888764
No 9
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=4.7e-37 Score=256.80 Aligned_cols=262 Identities=43% Similarity=0.757 Sum_probs=217.2
Q ss_pred CCcccceEEEEeecCCCCCCCCCEEEecccceeeEeecCC---ccceeccCCCCCc--c--ccccccCchhhhHHHHhhh
Q 042426 2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSP---QLLIKILDTSVPL--P--YYTGILGMPGLTAYGGLHE 74 (270)
Q Consensus 2 ~~i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~---~~~~~~~p~~~~~--~--~~~a~l~~~~~ta~~~l~~ 74 (270)
|.+.|+++++.|-+.+++|++||+|+++++|++|++++++ . ++++ |++++. . ...++++.+++|||+++.+
T Consensus 60 p~v~G~e~~G~V~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~ 137 (329)
T cd08294 60 DTMIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPD-LYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLE 137 (329)
T ss_pred CcEecceEEEEEecCCCCCCCCCEEEeeCCeeeEEEECCccccc-eEEC-CccccccCChHHHHHhcccHHHHHHHHHHH
Confidence 4567787777777778899999999999999999999999 8 9999 998441 1 1245789999999999988
Q ss_pred hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEE
Q 042426 75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIY 154 (270)
Q Consensus 75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v 154 (270)
.+++++|+++||+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++++. ++.+.+.+.+++++|++
T Consensus 138 ~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~v 215 (329)
T cd08294 138 ICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCY 215 (329)
T ss_pred hcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEE
Confidence 899999999999999999999999999999999999999999999998 7999999999887 88888887776689999
Q ss_pred EeCCCcchHHHHHHccccCCEEEEEcccccccccCCC-CccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCc
Q 042426 155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPE-GVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGK 233 (270)
Q Consensus 155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 233 (270)
||++|+..+..++++++++|+++.+|........... .......+..+++++.++..........+.++++.+++++|+
T Consensus 216 ld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~ 295 (329)
T cd08294 216 FDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGK 295 (329)
T ss_pred EECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999864321110000 122344566678888876554322334567889999999999
Q ss_pred eeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
+++.+..+++++++++|++.+.+++..||+|+++
T Consensus 296 i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 296 LKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred CcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 9987667899999999999999999999999864
No 10
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=100.00 E-value=2.2e-37 Score=239.85 Aligned_cols=268 Identities=72% Similarity=1.226 Sum_probs=243.2
Q ss_pred CcccceEEEEeecCCCCCCCCCEEEecccceeeEeecCCc-cceec-cCCCCCccccccccCchhhhHHHHhhhhcCCCC
Q 042426 3 PLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQ-LLIKI-LDTSVPLPYYTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 3 ~i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~~~~~-~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
||+|.|+...+.|..+++++||.|+++-+|.||.++++.. -.+++ -|...|++....++..+++|||..+++.+..++
T Consensus 74 pi~g~GV~kVi~S~~~~~~~GD~v~g~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~ 153 (343)
T KOG1196|consen 74 PIDGFGVAKVIDSGHPNYKKGDLVWGIVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKK 153 (343)
T ss_pred EecCCceEEEEecCCCCCCcCceEEEeccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCC
Confidence 6889899888999999999999999999999999998754 13443 024667776689999999999999999999999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 160 (270)
|++++|.||+|++|+.+.|+|+.+|++|+.++.|+++.+.++.++|.+..+||.++.+..+.+++..+.|+|+-||.+|+
T Consensus 154 geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG 233 (343)
T KOG1196|consen 154 GETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGG 233 (343)
T ss_pred CCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCc
Confidence 99999999999999999999999999999999999999999989999999999987688999999888899999999999
Q ss_pred chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeee
Q 042426 161 KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240 (270)
Q Consensus 161 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 240 (270)
..++..+..|+..||++.+|..++++.+.+....+......|++++.|+-..++.+.+.+.++.+..++++|+++-..+.
T Consensus 234 ~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi 313 (343)
T KOG1196|consen 234 KMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI 313 (343)
T ss_pred HHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH
Confidence 99999999999999999999999888777766677788888999999988888877788999999999999999988776
Q ss_pred ecCcccHHHHHHHHhcCCccceEEEEecCC
Q 042426 241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270 (270)
Q Consensus 241 ~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~ 270 (270)
.-+++..+.|+..|.+++..||.++++..|
T Consensus 314 ~~Glen~P~A~vglf~GkNvGKqiv~va~E 343 (343)
T KOG1196|consen 314 ADGLENGPSALVGLFHGKNVGKQLVKVARE 343 (343)
T ss_pred HHHHhccHHHHHHHhccCcccceEEEeecC
Confidence 779999999999999999999999999765
No 11
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=5e-37 Score=258.27 Aligned_cols=261 Identities=38% Similarity=0.647 Sum_probs=208.7
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec-ccceeeEeecCCccceeccCCCCCc---cccccccCchhhhHHHHhhhhcCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL-TSWEEFSLIQSPQLLIKILDTSVPL---PYYTGILGMPGLTAYGGLHELCSPK 79 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~~~~~~p~~~~~---~~~~a~l~~~~~ta~~~l~~~~~~~ 79 (270)
.+++|+|.++|++|++|++||+|+++ ++|+||++++++. ++++ |++++. ++.+++++.+++|||+++.+.++++
T Consensus 74 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~-~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~ 151 (345)
T cd08293 74 LDGGGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSS-LEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHIT 151 (345)
T ss_pred eEeeEEEEEeccCCCCCCCCCEEEecCCCceeEEEecHHH-eEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCC
Confidence 46778888899999999999999988 6899999999999 9999 887322 2235678889999999998888888
Q ss_pred CC--cEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426 80 KG--EYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE 156 (270)
Q Consensus 80 ~g--~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d 156 (270)
+| ++|||+|++|++|++++|+|+.+|+ +|+++++++++.+.+++++|+++++++++. ++.+.+++.+++++|++||
T Consensus 152 ~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid 230 (345)
T cd08293 152 PGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFD 230 (345)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEE
Confidence 77 9999999999999999999999999 899999999999999845999999998886 8888888877668999999
Q ss_pred CCCcchHHHHHHccccCCEEEEEcccccccccCCC-Cccc--hHHH-HhhcceeeeccccCcccchHHHHHHHHHHHHCC
Q 042426 157 NVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPE-GVHN--LMQV-VGKRICMEGFLAGDFYHQYPKFLELVMLAIKEG 232 (270)
Q Consensus 157 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 232 (270)
|+|+..+..++++++++|+++.+|........... .... .... ..+++++.++..........+.++++.+++.+|
T Consensus 231 ~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 310 (345)
T cd08293 231 NVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEG 310 (345)
T ss_pred CCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCC
Confidence 99998889999999999999999854321000000 0111 1111 234444444433222233456788899999999
Q ss_pred ceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 233 KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 233 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.+++.....++++++++|++.+.+++..||+|+++
T Consensus 311 ~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 311 KLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred CccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 99887666779999999999999999899999875
No 12
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.6e-36 Score=253.19 Aligned_cols=261 Identities=42% Similarity=0.695 Sum_probs=208.6
Q ss_pred CCcccceEEEEeecCCCCCCCCCEEEecccceeeEeecCCccceecc---CCCCCcccc-c-cccCchhhhHHHHhhhhc
Q 042426 2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKIL---DTSVPLPYY-T-GILGMPGLTAYGGLHELC 76 (270)
Q Consensus 2 ~~i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~---p~~~~~~~~-~-a~l~~~~~ta~~~l~~~~ 76 (270)
|.|+|.+.+++|-+..+.|++||+|+++++|++|++++.+. +.+++ |++ ++++ + ++++++++|||+++.+.+
T Consensus 58 ~~i~G~~~~g~v~~~~~~~~~GdrV~~~~~~~~~~~~~~~~-~~~l~~~~p~~--~~~~~aaa~l~~~~~TA~~~l~~~~ 134 (325)
T TIGR02825 58 DTMMGQQVARVVESKNVALPKGTIVLASPGWTSHSISDGKD-LEKLLTEWPDT--LPLSLALGTVGMPGLTAYFGLLEIC 134 (325)
T ss_pred CcEecceEEEEEEeCCCCCCCCCEEEEecCceeeEEechhh-eEEccccccCC--CCHHHHHHhcccHHHHHHHHHHHHh
Confidence 34667666666555556799999999998999999999888 76661 555 4543 4 679999999999998889
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426 77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE 156 (270)
Q Consensus 77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d 156 (270)
++++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++..++.+.+....++++|++||
T Consensus 135 ~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d 213 (325)
T TIGR02825 135 GVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFD 213 (325)
T ss_pred CCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEE
Confidence 9999999999999999999999999999999999999999999998 899999999876425666666665558999999
Q ss_pred CCCcchHHHHHHccccCCEEEEEcccccccccCCC-CccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCce
Q 042426 157 NVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPE-GVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGKL 234 (270)
Q Consensus 157 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ 234 (270)
|+|+..+..++++++++|+++.+|........... .......+..+++++.++....+ .....+.++++.+++.+|++
T Consensus 214 ~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l 293 (325)
T TIGR02825 214 NVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKI 293 (325)
T ss_pred CCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCc
Confidence 99998889999999999999999875421100011 11123445667777777665332 22234678899999999999
Q ss_pred eeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
++.+..+|+++++++|++.+.+++..||+|++
T Consensus 294 ~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 294 QYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred ccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 98877889999999999999999999999974
No 13
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.7e-36 Score=256.99 Aligned_cols=248 Identities=17% Similarity=0.237 Sum_probs=211.7
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE 33 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~ 33 (270)
+++|+|.++|+++++|++||+|++. |+|+
T Consensus 68 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~a 147 (371)
T cd08281 68 EAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFA 147 (371)
T ss_pred cceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccce
Confidence 4568888899999999999999751 5899
Q ss_pred eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426 34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS 111 (270)
Q Consensus 34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~ 111 (270)
||+.+++++ ++++ |++ +++ +++.++++++|||.++...+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++
T Consensus 148 ey~~v~~~~-~~~l-P~~--l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~ 222 (371)
T cd08281 148 EYAVVSRRS-VVKI-DKD--VPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAV 222 (371)
T ss_pred eeEEecccc-eEEC-CCC--CChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEE
Confidence 999999999 9999 999 555 478888899999999877889999999999986 9999999999999999 69999
Q ss_pred eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCC
Q 042426 112 ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKP 190 (270)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 190 (270)
++++++++.++ ++|+++++++.+. ++.+.+++.+++++|++|||+|. ..+..++++++++|+++.+|..... .
T Consensus 223 ~~~~~r~~~a~-~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~ 296 (371)
T cd08281 223 DLNEDKLALAR-ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----A 296 (371)
T ss_pred cCCHHHHHHHH-HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----c
Confidence 99999999998 9999999998876 88888888776689999999987 5889999999999999999875321 1
Q ss_pred CCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 191 EGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
...++...++.+++++.++....+. ..+.++++++++.+|++++ .++++|+++|+++|++.+.+++..+|+|+
T Consensus 297 ~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 297 RLSVPALSLVAEERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred eeeecHHHHhhcCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 2235566778899999998765432 2456888999999999975 57789999999999999999998888764
No 14
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=5.5e-37 Score=242.85 Aligned_cols=249 Identities=23% Similarity=0.280 Sum_probs=215.4
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe---------------------------------------------------cccce
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG---------------------------------------------------LTSWE 33 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------------------------------~g~~~ 33 (270)
||+|+|++||++|+++++||+|+. .++|+
T Consensus 62 EgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa 141 (366)
T COG1062 62 EGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFA 141 (366)
T ss_pred ccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccch
Confidence 688999999999999999999931 14899
Q ss_pred eeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEe
Q 042426 34 EFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSA 112 (270)
Q Consensus 34 ~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~ 112 (270)
||.++++.. ++|+ ++..|+. .+|.+.|...|.+.+..+.+++++|+++.|.|. |++|++++|-|+..|+ +|++++
T Consensus 142 ~y~vv~~~s-~vki-~~~~p~~-~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD 217 (366)
T COG1062 142 EYTVVHEIS-LVKI-DPDAPLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVD 217 (366)
T ss_pred hheeecccc-eEEC-CCCCCcc-ceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEe
Confidence 999999999 9999 6663444 589999999999999989999999999999997 9999999999999999 999999
Q ss_pred CCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCC
Q 042426 113 RSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPE 191 (270)
Q Consensus 113 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 191 (270)
..+++++.++ +||+++.+|.++..++.+.+++.+++|+|++|||+|+ ..+++++.++.++|+.+.+|..+. ...
T Consensus 218 ~~~~Kl~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~----~~~ 292 (366)
T COG1062 218 INPEKLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA----GQE 292 (366)
T ss_pred CCHHHHHHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC----Cce
Confidence 9999999999 9999999999876359999999999899999999998 589999999999999999998653 233
Q ss_pred CccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 192 GVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.+.+...++.. .+++|+..+.. ..+.++.+++++..+|++.. .++..++++|+++||++|.+++.. |-||+
T Consensus 293 i~~~~~~lv~g-r~~~Gs~~G~~--~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 293 ISTRPFQLVTG-RVWKGSAFGGA--RPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred eecChHHeecc-ceEEEEeecCC--ccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 33555555555 78888888765 23567999999999999865 677899999999999999999866 55554
No 15
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=6.3e-36 Score=250.98 Aligned_cols=242 Identities=21% Similarity=0.234 Sum_probs=205.7
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
+++|+|.++|++|+.|++||+|+. .|+|+||+.+++++ ++++ |++
T Consensus 61 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~-~~~~-P~~-- 136 (339)
T cd08239 61 EPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKT-LIPL-PDD-- 136 (339)
T ss_pred CceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHH-eEEC-CCC--
Confidence 467888899999999999999974 27899999999999 9999 998
Q ss_pred ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCcee
Q 042426 54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAF 131 (270)
Q Consensus 54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi 131 (270)
+++ ++++++++++|||+++. ..++++|++|+|+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|+++++
T Consensus 137 ~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i 213 (339)
T cd08239 137 LSFADGALLLCGIGTAYHALR-RVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVI 213 (339)
T ss_pred CCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEE
Confidence 555 48888999999999994 577899999999986 99999999999999997 999999999999998 99999999
Q ss_pred ecCCchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426 132 NYKEEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF 209 (270)
Q Consensus 132 ~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (270)
++++. + .+.+.+.+++ ++|++|||+|+. .+..++++++++|+++.+|..... + ......++.+++++.++
T Consensus 214 ~~~~~-~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~--~~~~~~~~~~~~~i~g~ 285 (339)
T cd08239 214 NSGQD-D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL----T--IEVSNDLIRKQRTLIGS 285 (339)
T ss_pred cCCcc-h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc----c--cCcHHHHHhCCCEEEEE
Confidence 98876 6 6777777766 899999999986 558899999999999999875421 1 11134567788999887
Q ss_pred cccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 210 LAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
+... .+.++++++++.+|++.+ .++++|+++++++|++.+.++. .||+|+++
T Consensus 286 ~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 286 WYFS-----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred ecCC-----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 7644 467899999999999864 6778999999999999998876 69999975
No 16
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.2e-35 Score=250.75 Aligned_cols=248 Identities=19% Similarity=0.270 Sum_probs=209.3
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe-------------------------------------------cccceeeEeecCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------------------LTSWEEFSLIQSP 41 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------------------~g~~~~~~~v~~~ 41 (270)
+++|+|.++|+++++|++||+|+. .|+|+||+.++++
T Consensus 61 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~ 140 (358)
T TIGR03451 61 EAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAG 140 (358)
T ss_pred ceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehh
Confidence 467888889999999999999974 2789999999999
Q ss_pred ccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 042426 42 QLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVD 119 (270)
Q Consensus 42 ~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~ 119 (270)
+ ++++ |++ ++. +++.++++++++|.++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++
T Consensus 141 ~-~~~i-p~~--~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~ 215 (358)
T TIGR03451 141 Q-CTKV-DPA--ADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLE 215 (358)
T ss_pred h-eEEC-CCC--CChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 9 9999 988 454 488888899999998877888999999999985 9999999999999999 5999999999999
Q ss_pred HHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchH
Q 042426 120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLM 197 (270)
Q Consensus 120 ~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 197 (270)
.++ ++|+++++++++. ++.+.+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.... .....++..
T Consensus 216 ~~~-~~Ga~~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~----~~~~~~~~~ 289 (358)
T TIGR03451 216 WAR-EFGATHTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTP----DMTLELPLL 289 (358)
T ss_pred HHH-HcCCceEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC----CceeeccHH
Confidence 998 9999999998876 788888888876 89999999997 588999999999999999997532 111234556
Q ss_pred HHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 198 QVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.++.+++++.+++.... ...+.++++++++++|++++ .++++|+++|+++|++.+++++.. |+++.
T Consensus 290 ~~~~~~~~i~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 290 DVFGRGGALKSSWYGDC--LPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHhhcCCEEEEeecCCC--CcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 77788888888765322 12567889999999999975 578899999999999999988765 77764
No 17
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=8.2e-36 Score=248.74 Aligned_cols=249 Identities=23% Similarity=0.286 Sum_probs=209.2
Q ss_pred ccceEEEEeecCCCC-CCCCCEEEec----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426 5 SGYGVSKVLDSTHPN-YKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP 78 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~-~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~ 78 (270)
+++|+|.++|+++++ |++||+|+++ |+|+||+++++++ ++++ |++ +++ ++++++..++|||.++ ...+.
T Consensus 67 e~~G~V~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~-~~~i-P~~--~~~~~aa~~~~~~~ta~~~~-~~~~~ 141 (324)
T cd08291 67 EGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQ-CLPL-PDG--VSFEQGASSFVNPLTALGML-ETARE 141 (324)
T ss_pred ceEEEEEEECCCccccCCCCCEEEecCCCCCcchheeeecHHH-eEEC-CCC--CCHHHHhhhcccHHHHHHHH-Hhhcc
Confidence 467888889999996 9999999986 8999999999999 9999 998 555 4777888889998655 45555
Q ss_pred CCCcEEEEe-cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEe
Q 042426 79 KKGEYVYVS-AASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFE 156 (270)
Q Consensus 79 ~~g~~vlI~-ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d 156 (270)
+++.++|+ +++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++++. ++.+.+.+.+++ ++|++||
T Consensus 142 -~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid 218 (324)
T cd08291 142 -EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFD 218 (324)
T ss_pred -CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEE
Confidence 45566665 78899999999999999999999999999999998 8999999998877 888888888776 8999999
Q ss_pred CCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCcee
Q 042426 157 NVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGKLV 235 (270)
Q Consensus 157 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~ 235 (270)
|+|+......+++++++|+++.+|..... .....+...++.+++++.+++...+ .....+.++++.+++. +.++
T Consensus 219 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 293 (324)
T cd08291 219 AVGGGLTGQILLAMPYGSTLYVYGYLSGK----LDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELK 293 (324)
T ss_pred CCCcHHHHHHHHhhCCCCEEEEEEecCCC----CcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccc
Confidence 99998888899999999999999875421 1112445566788999988887654 2223567888999988 9999
Q ss_pred eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 236 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 236 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+.++++|+++|+++|++.+.+++..||+++.
T Consensus 294 ~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 294 TTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred cceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 9999999999999999999999999999873
No 18
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2e-35 Score=248.09 Aligned_cols=239 Identities=18% Similarity=0.185 Sum_probs=198.4
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe-----------------------------------cccceeeEeecCCccceeccC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG-----------------------------------LTSWEEFSLIQSPQLLIKILD 49 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~~~p 49 (270)
+++|+|+++ ++++|++||+|+. .|+|+||++++++. ++++ |
T Consensus 66 E~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~-~~~~-P 141 (343)
T PRK09880 66 EVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQ-CIPY-P 141 (343)
T ss_pred ccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHH-eEEC-C
Confidence 455677777 7889999999973 28899999999999 9999 9
Q ss_pred CCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC
Q 042426 50 TSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD 128 (270)
Q Consensus 50 ~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~ 128 (270)
++ ++.+.+++..++++||+++.+ ....+|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|++
T Consensus 142 ~~--l~~~~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~ 216 (343)
T PRK09880 142 EK--ADEKVMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGAD 216 (343)
T ss_pred CC--CCHHHHHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCc
Confidence 99 665556677888999999955 45668999999986 9999999999999999 6999999999999998 89999
Q ss_pred ceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceee
Q 042426 129 DAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICME 207 (270)
Q Consensus 129 ~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (270)
+++|+++. ++.+... . .+++|++|||+|++ .+..++++++++|+++.+|.... ...++...++.+++++.
T Consensus 217 ~vi~~~~~-~~~~~~~-~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~ 287 (343)
T PRK09880 217 KLVNPQND-DLDHYKA-E-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLK 287 (343)
T ss_pred EEecCCcc-cHHHHhc-c-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEE
Confidence 99998876 6544332 1 23699999999984 78899999999999999987431 22355667778899998
Q ss_pred eccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 208 GFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
++... .+.++++.+++++|++.+ .++++|+++|+++|++.+.+++..||+++.+
T Consensus 288 g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 288 GSFRF------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred EEeec------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 87642 256889999999999975 5778999999999999999988889999864
No 19
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.3e-35 Score=248.56 Aligned_cols=250 Identities=19% Similarity=0.249 Sum_probs=207.9
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE 33 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~ 33 (270)
+++|+|.++|++|++|++||+|++. |+|+
T Consensus 70 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~a 149 (378)
T PLN02827 70 EASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFS 149 (378)
T ss_pred cceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccce
Confidence 5788888999999999999999752 6899
Q ss_pred eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426 34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS 111 (270)
Q Consensus 34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~ 111 (270)
||+.++++. ++++ |++ +++ +++.++++++++|.++.+.+++++|++|||+|+ |++|++++|+|+.+|+ .|+++
T Consensus 150 eyv~v~~~~-~~~i-P~~--l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~ 224 (378)
T PLN02827 150 EYTVVHSGC-AVKV-DPL--APLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGV 224 (378)
T ss_pred eeEEechhh-eEEC-CCC--CCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence 999999999 9999 999 554 477888888999988767788999999999986 9999999999999999 57888
Q ss_pred eCCHHHHHHHHHHhCCCceeecCCc-hhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccC-CEEEEEccccccccc
Q 042426 112 ARSKEKVDLLKHKFGFDDAFNYKEE-PDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRIC-GHIAVCGMISQYNIE 188 (270)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 188 (270)
++++++.+.++ ++|+++++++++. +++.+.+.+.+++++|++|||+|.. .+..+++.++++ |+++.+|....
T Consensus 225 ~~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~---- 299 (378)
T PLN02827 225 DINPEKAEKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA---- 299 (378)
T ss_pred CCCHHHHHHHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC----
Confidence 88999999998 9999988888652 2677778777766899999999985 789999999998 99999987542
Q ss_pred CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+........++.+++++.|+....+. ....+.++.+++++|++++ .++++|+++++++|++.+.+++. .|+||+
T Consensus 300 -~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~ 375 (378)
T PLN02827 300 -KPEVSAHYGLFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIH 375 (378)
T ss_pred -CccccccHHHHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEE
Confidence 11111123567789999988765431 2356888999999999998 78889999999999999998886 599998
Q ss_pred ec
Q 042426 267 VA 268 (270)
Q Consensus 267 ~~ 268 (270)
+.
T Consensus 376 ~~ 377 (378)
T PLN02827 376 MP 377 (378)
T ss_pred ec
Confidence 64
No 20
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.5e-35 Score=246.47 Aligned_cols=242 Identities=15% Similarity=0.180 Sum_probs=198.7
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe--------------------------------------cccceeeEeecCCcccee
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEFSLIQSPQLLIK 46 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~ 46 (270)
+++|+|+++|++|++|++||+|+. .|+|+||+++++++ +++
T Consensus 73 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~ 151 (360)
T PLN02586 73 EIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHF-VLR 151 (360)
T ss_pred ceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHH-eee
Confidence 457888889999999999999962 27899999999999 999
Q ss_pred ccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 042426 47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125 (270)
Q Consensus 47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~ 125 (270)
+ |++ +++ ++|++++.+.|+|+++.....+++|++|+|.|+ |++|++++|+|+.+|++|++++.++++...+.+++
T Consensus 152 l-P~~--ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~ 227 (360)
T PLN02586 152 F-PDN--LPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL 227 (360)
T ss_pred C-CCC--CCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC
Confidence 9 999 555 488899999999999876677789999999886 99999999999999999988887766654443389
Q ss_pred CCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcc
Q 042426 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI 204 (270)
Q Consensus 126 g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 204 (270)
|+++++++++. + .+.+..+ ++|++||++|.. .+..++++++++|+++.+|.... ...++...++.++.
T Consensus 228 Ga~~vi~~~~~-~---~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~ 296 (360)
T PLN02586 228 GADSFLVSTDP-E---KMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRK 296 (360)
T ss_pred CCcEEEcCCCH-H---HHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCe
Confidence 99988876653 2 3444433 699999999974 78899999999999999986431 12345566677777
Q ss_pred eeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426 205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA 268 (270)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 268 (270)
.+.++..++ .+.++++++++++|++++.+ ++|+++|+++|++.+.+++..||+|+++.
T Consensus 297 ~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 354 (360)
T PLN02586 297 LVGGSDIGG-----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDVA 354 (360)
T ss_pred EEEEcCcCC-----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 777776543 35689999999999999876 57999999999999999998899999863
No 21
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=5.3e-35 Score=246.05 Aligned_cols=251 Identities=18% Similarity=0.182 Sum_probs=202.0
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVPL 54 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~~ 54 (270)
+++|+|.++|+++++|++||+|++ .|+|+||+.++++. ++++ |++ +
T Consensus 60 e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~--~ 135 (347)
T PRK10309 60 EFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKN-LFAL-PTD--M 135 (347)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHH-eEEC-cCC--C
Confidence 467888889999999999999976 27899999999999 9999 998 6
Q ss_pred cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceeec
Q 042426 55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFNY 133 (270)
Q Consensus 55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~~ 133 (270)
+++.|++..+++++|+++ ....+++|++|+|+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|+++++++
T Consensus 136 s~~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~ 212 (347)
T PRK10309 136 PIEDGAFIEPITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNS 212 (347)
T ss_pred CHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecC
Confidence 654333333566778876 5678899999999975 99999999999999996 788888999999987 8999989988
Q ss_pred CCchhHHHHHHhHcCC-Ccc-EEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426 134 KEEPDLDAALNRCFPE-GID-IYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL 210 (270)
Q Consensus 134 ~~~~~~~~~i~~~~~~-~~d-~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (270)
++. + .+.+.+.+.+ ++| ++|||+|+. .+..++++++++|+++.+|..... .+....+...++.+++++.|+.
T Consensus 213 ~~~-~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~---~~~~~~~~~~~~~~~~~i~g~~ 287 (347)
T PRK10309 213 REM-S-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD---LHLTSATFGKILRKELTVIGSW 287 (347)
T ss_pred ccc-C-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC---cccChhhhhHHhhcCcEEEEEe
Confidence 765 5 4556666665 888 999999974 889999999999999999975421 1111112345677889999876
Q ss_pred ccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 211 AGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.........+.++++++++++|++. +.++++|+++|+++|++.+.+++..||+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 288 MNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred ccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 6432111246788999999999984 66888999999999999999988889999975
No 22
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.2e-35 Score=243.77 Aligned_cols=257 Identities=26% Similarity=0.358 Sum_probs=202.8
Q ss_pred cccceEEEEe---e-cCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhh
Q 042426 4 LSGYGVSKVL---D-STHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHEL 75 (270)
Q Consensus 4 i~g~g~v~~v---G-~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~ 75 (270)
-+|+|++..+ | ..+..+..||.+... |+|+||.++++.. ++++ |++ +++ ++|++|.++.|||.++.+.
T Consensus 71 ~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~-~~~~-P~~--l~~~~aa~~p~~~~tA~~al~~~ 146 (347)
T KOG1198|consen 71 RDGSGVVGAVESVGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKL-LVKI-PES--LSFEEAAALPLAALTALSALFQL 146 (347)
T ss_pred cccCCceeEEeccccccccceEeeeEEeeccCCCceeeEEEcchhh-ccCC-CCc--cChhhhhcCchHHHHHHHHHHhc
Confidence 4566664443 4 334456667777666 9999999999999 9999 999 665 5999999999999999999
Q ss_pred c------CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC
Q 042426 76 C------SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE 149 (270)
Q Consensus 76 ~------~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~ 149 (270)
+ ++++|++|||+||+|++|++++|+|++.|+..+++++++++.++++ ++|+++++||+++ ++.+.+.+.+.+
T Consensus 147 ~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~ 224 (347)
T KOG1198|consen 147 APGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGADEVVDYKDE-NVVELIKKYTGK 224 (347)
T ss_pred cccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCcEeecCCCH-HHHHHHHhhcCC
Confidence 9 8999999999999999999999999999965555555999999999 9999999999998 999999998844
Q ss_pred CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHH-HHh---hcceeeeccccCc-ccchHHHHHH
Q 042426 150 GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQ-VVG---KRICMEGFLAGDF-YHQYPKFLEL 224 (270)
Q Consensus 150 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~-~~~~~~~~~~ 224 (270)
+||+||||+|+.....+..++..+|+...++............ ..+. +.. ....+.+...... .....+.++.
T Consensus 225 ~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 302 (347)
T KOG1198|consen 225 GVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLD--DLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKA 302 (347)
T ss_pred CccEEEECCCCCccccchhhhccCCceEEEEeccccccccccc--cchhhhhhhhheeeeeeccceeeeeecCCHHHHHH
Confidence 9999999999988889999999888655555443321111111 1111 111 1112222222211 4455788999
Q ss_pred HHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426 225 VMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA 268 (270)
Q Consensus 225 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 268 (270)
+.+++++|+++|.+.+.||++++.+|++.+.++...||+++++.
T Consensus 303 l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 303 LVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred HHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 99999999999999999999999999999999999999999875
No 23
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.5e-34 Score=244.52 Aligned_cols=241 Identities=17% Similarity=0.205 Sum_probs=199.8
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe--------------------------------------cccceeeEeecCCcccee
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEFSLIQSPQLLIK 46 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~ 46 (270)
+++|+|.++|+++++|++||+|.. .|+|+||++++++. +++
T Consensus 67 E~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~ 145 (375)
T PLN02178 67 EIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRF-VLS 145 (375)
T ss_pred eeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHH-eEE
Confidence 457888889999999999999962 27899999999999 999
Q ss_pred ccCCCCCccc-cccccCchhhhHHHHhhhhcC-CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH
Q 042426 47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCS-PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-VDLLKH 123 (270)
Q Consensus 47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~-~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-~~~~~~ 123 (270)
+ |++ +++ +++++++++.|+|+++..... .++|++|+|.|+ |++|++++|+|+.+|++|+++++++++ .+.++
T Consensus 146 l-P~~--ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~- 220 (375)
T PLN02178 146 I-PDG--LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID- 220 (375)
T ss_pred C-CCC--CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-
Confidence 9 999 555 488899999999999865443 368999999986 999999999999999999999877554 66776
Q ss_pred HhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhh
Q 042426 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGK 202 (270)
Q Consensus 124 ~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (270)
++|+++++++++. +.+.+.++ ++|++|||+|.. .+..++++++++|+++.+|.... ...++...++.+
T Consensus 221 ~lGa~~~i~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~ 289 (375)
T PLN02178 221 RLGADSFLVTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLG 289 (375)
T ss_pred hCCCcEEEcCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhC
Confidence 8999988886642 23444443 699999999986 78999999999999999987431 123556677788
Q ss_pred cceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426 203 RICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA 268 (270)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 268 (270)
++++.|+.... .+.+.++++++.+|++++.+ .+||++|+++|++.+.+++..||+|+++.
T Consensus 290 ~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 349 (375)
T PLN02178 290 RKMVGGSQIGG-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDVA 349 (375)
T ss_pred CeEEEEeCccC-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence 99998877654 46788999999999999877 56999999999999999998899999873
No 24
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.8e-34 Score=245.37 Aligned_cols=249 Identities=20% Similarity=0.244 Sum_probs=204.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe------------------------------------------------------cc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------------------------------LT 30 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------------------------------~g 30 (270)
+++|+|.++|+++++|++||+|++ .|
T Consensus 72 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G 151 (381)
T PLN02740 72 EAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTS 151 (381)
T ss_pred cceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCc
Confidence 567888889999999999999974 26
Q ss_pred cceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EE
Q 042426 31 SWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YV 108 (270)
Q Consensus 31 ~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v 108 (270)
+|+||++++++. ++++ |++ ++. +++.+++++.|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|
T Consensus 152 ~~aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~V 226 (381)
T PLN02740 152 TFTEYTVLDSAC-VVKI-DPN--APLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKI 226 (381)
T ss_pred cceeEEEEehHH-eEEC-CCC--CCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcE
Confidence 899999999999 9999 998 554 478888899999998877789999999999996 9999999999999999 69
Q ss_pred EEEeCCHHHHHHHHHHhCCCceeecCCc-hhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEcccccc
Q 042426 109 VGSARSKEKVDLLKHKFGFDDAFNYKEE-PDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQY 185 (270)
Q Consensus 109 ~~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~ 185 (270)
+++++++++++.++ ++|+++++++++. .++.+.+.+.+++++|++||++|+ ..+..++++++++ |+++.+|.....
T Consensus 227 i~~~~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~ 305 (381)
T PLN02740 227 IGVDINPEKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP 305 (381)
T ss_pred EEEcCChHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC
Confidence 99999999999998 9999988887753 147777887766689999999997 5889999999996 999999975421
Q ss_pred cccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceE
Q 042426 186 NIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQ 263 (270)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~ 263 (270)
....+....+ .++.++.|+....+. ....+.++++++.+|++++ .++.+|+++|+++|++.+.+++. .|+
T Consensus 306 ----~~~~~~~~~~-~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~ 377 (381)
T PLN02740 306 ----KMLPLHPMEL-FDGRSITGSVFGDFK--GKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRC 377 (381)
T ss_pred ----ceecccHHHH-hcCCeEEEEecCCCC--cHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeE
Confidence 1112222223 367888887665432 1356889999999998864 57789999999999999988875 499
Q ss_pred EEEe
Q 042426 264 LVAV 267 (270)
Q Consensus 264 vv~~ 267 (270)
+|+.
T Consensus 378 ~~~~ 381 (381)
T PLN02740 378 LLHL 381 (381)
T ss_pred EEeC
Confidence 8863
No 25
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=7.4e-35 Score=224.63 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=209.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
||.|.|+.||++++.|++||+|+.. |+|++|.+.+++. ++++ ++.+++. +||++.+..+|||.+|.+.-++.+
T Consensus 84 EGv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~-Li~v-d~~~pl~-~AAT~~VNP~TAyrmL~dfv~L~~ 160 (354)
T KOG0025|consen 84 EGVGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESD-LIKV-DKDIPLA-SAATLSVNPCTAYRMLKDFVQLNK 160 (354)
T ss_pred cceEEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccc-eEEc-CCcCChh-hhheeccCchHHHHHHHHHHhcCC
Confidence 4566677789999999999999877 9999999999999 9999 8886655 699999999999999999999999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhH-cCC-CccEEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRC-FPE-GIDIYF 155 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~-~~~-~~d~v~ 155 (270)
||+|+..||++++|++.+|+|+++|++-+-++|+..+.+++++ .+|+++|+.-.+. ......+. ... ++.+.|
T Consensus 161 GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel--~~~~~~k~~~~~~~prLal 238 (354)
T KOG0025|consen 161 GDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL--RDRKMKKFKGDNPRPRLAL 238 (354)
T ss_pred CCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh--cchhhhhhhccCCCceEEE
Confidence 9999999999999999999999999999999998877776653 5799999854331 11112111 122 689999
Q ss_pred eCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc------ccchHHHHHHHHHHH
Q 042426 156 ENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF------YHQYPKFLELVMLAI 229 (270)
Q Consensus 156 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 229 (270)
||+|+.......+.|..||+++++|.++. .+...+...+..|+++++|+++..| ++...+.+.++.+++
T Consensus 239 NcVGGksa~~iar~L~~GgtmvTYGGMSk-----qPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~ 313 (354)
T KOG0025|consen 239 NCVGGKSATEIARYLERGGTMVTYGGMSK-----QPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLY 313 (354)
T ss_pred eccCchhHHHHHHHHhcCceEEEecCccC-----CCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHH
Confidence 99999988899999999999999999885 4445667788899999999999877 334457789999999
Q ss_pred HCCceeeeeeeecCcccHHHHHHHHhcCC-ccceEEEEe
Q 042426 230 KEGKLVYVEDIAEGLEKAPSALVGIFTGQ-NVGKQLVAV 267 (270)
Q Consensus 230 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~ 267 (270)
..|+++.+.....++++...|++...+.. ..||-++.+
T Consensus 314 ~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 314 RRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred HcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 99999999888899999999998766543 335555544
No 26
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=3.8e-34 Score=242.26 Aligned_cols=249 Identities=20% Similarity=0.248 Sum_probs=200.3
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE 33 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~ 33 (270)
+++|+|.++|++|++|++||+|+.. |+|+
T Consensus 62 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~a 141 (368)
T TIGR02818 62 EGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFS 141 (368)
T ss_pred ccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccce
Confidence 5677888899999999999999642 4899
Q ss_pred eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426 34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS 111 (270)
Q Consensus 34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~ 111 (270)
||+++++++ ++++ |++ +++ ++++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus 142 ey~~v~~~~-~~~l-P~~--l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~ 216 (368)
T TIGR02818 142 EYTVVPEIS-LAKI-NPA--APLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAI 216 (368)
T ss_pred eeEEechhh-eEEC-CCC--CCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence 999999999 9999 998 555 488889999999999877889999999999986 9999999999999999 89999
Q ss_pred eCCHHHHHHHHHHhCCCceeecCCc-hhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEccccccccc
Q 042426 112 ARSKEKVDLLKHKFGFDDAFNYKEE-PDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNIE 188 (270)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 188 (270)
++++++++.++ ++|+++++++++. .++.+.+.+.+++++|++|||+|+ ..+..++++++++ |+++.+|..+..
T Consensus 217 ~~~~~~~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~--- 292 (368)
T TIGR02818 217 DINPAKFELAK-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG--- 292 (368)
T ss_pred cCCHHHHHHHH-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC---
Confidence 99999999998 9999988887642 156677777776689999999997 4788999999886 999999875321
Q ss_pred CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.....+...++. +..+.++..... .....+.++++++.+|++. +.++++|+++|+++|++.+.+++. .|++|+
T Consensus 293 -~~~~~~~~~~~~-~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~ 367 (368)
T TIGR02818 293 -QEISTRPFQLVT-GRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIH 367 (368)
T ss_pred -CcccccHHHHhc-cceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEee
Confidence 111122333332 334555543321 1245688999999999885 457889999999999999988764 699987
Q ss_pred e
Q 042426 267 V 267 (270)
Q Consensus 267 ~ 267 (270)
+
T Consensus 368 ~ 368 (368)
T TIGR02818 368 Y 368 (368)
T ss_pred C
Confidence 4
No 27
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=4e-34 Score=238.66 Aligned_cols=250 Identities=19% Similarity=0.261 Sum_probs=214.2
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
+++|.|.++|++++.|++||+|++. |+|++|+.++++. ++++ |++ +++ +++.++..++++|+++ ..+++++
T Consensus 65 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~i-p~~--~~~~~aa~~~~~~~ta~~~~-~~~~~~~ 139 (324)
T cd08292 65 EAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADG-LVPL-PDG--ISDEVAAQLIAMPLSALMLL-DFLGVKP 139 (324)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEeccCCCcceeEEEEchHH-eEEC-CCC--CCHHHhhhccccHHHHHHHH-HhhCCCC
Confidence 5678888899999999999999985 8999999999999 9999 998 555 4788888889999988 4588999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG 159 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g 159 (270)
|++++|+|++|++|++++|+|+.+|++++++++++++.+.++ ++|+++++++++. ++.+.+.+.+++ ++|++|||+|
T Consensus 140 g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g 217 (324)
T cd08292 140 GQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVG 217 (324)
T ss_pred CCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCC
Confidence 999999999999999999999999999999999999999998 6899888888876 788888888887 9999999999
Q ss_pred cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHHHHHCCce
Q 042426 160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVMLAIKEGKL 234 (270)
Q Consensus 160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~ 234 (270)
+.....++++++++|+++.+|.... .....+....+.+++++.++....+ +....+.++++.+++.+|.+
T Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i 292 (324)
T cd08292 218 GKLAGELLSLLGEGGTLVSFGSMSG-----EPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQL 292 (324)
T ss_pred ChhHHHHHHhhcCCcEEEEEecCCC-----CCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCc
Confidence 9888999999999999999987431 1223445556678999988876543 12235678899999999999
Q ss_pred eeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.+.+...|+++++++|++.+.++...+|++++
T Consensus 293 ~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 293 LLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred cCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 86667789999999999999988888898863
No 28
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=5.6e-34 Score=237.61 Aligned_cols=234 Identities=15% Similarity=0.075 Sum_probs=196.3
Q ss_pred cccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSV 52 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~ 52 (270)
.+++|+|.++|+++++|++||+|+. .|+|+||+.+++++ ++++ |++
T Consensus 62 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~- 138 (329)
T TIGR02822 62 HEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAF-AYRL-PTG- 138 (329)
T ss_pred cceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEecccc-EEEC-CCC-
Confidence 3567888889999999999999963 27899999999999 9999 999
Q ss_pred Cccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee
Q 042426 53 PLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAF 131 (270)
Q Consensus 53 ~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi 131 (270)
+++ ++++++++++|||+++. .+++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+++++
T Consensus 139 -~~~~~aa~l~~~~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi 214 (329)
T TIGR02822 139 -YDDVELAPLLCAGIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAG 214 (329)
T ss_pred -CCHHHhHHHhccchHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceec
Confidence 554 47889999999999995 588999999999997 99999999999999999999999999999998 99999888
Q ss_pred ecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426 132 NYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL 210 (270)
Q Consensus 132 ~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (270)
++.+. . .+++|+++++.+. ..+..++++++++|+++.+|.... ....++...++.+++++.++.
T Consensus 215 ~~~~~-~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~ 279 (329)
T TIGR02822 215 GAYDT-P---------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLT-----DTPPLNYQRHLFYERQIRSVT 279 (329)
T ss_pred ccccc-C---------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCc-----cCCCCCHHHHhhCCcEEEEee
Confidence 75432 1 1258888888765 588899999999999999997432 112345566677888888776
Q ss_pred ccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 211 AGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
... ++.+.++.+++++|++++ ++++|+++|+++|++.+.+++..||+|+
T Consensus 280 ~~~-----~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 280 SNT-----RADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred cCC-----HHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 433 456788899999999975 4678999999999999999999999987
No 29
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.2e-33 Score=239.62 Aligned_cols=248 Identities=18% Similarity=0.237 Sum_probs=204.6
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec----------------------------------------------------cc
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL----------------------------------------------------TS 31 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~----------------------------------------------------g~ 31 (270)
.+++|+|.++|++|++|++||+|+.. |+
T Consensus 62 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~ 141 (369)
T cd08301 62 HEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTST 141 (369)
T ss_pred cccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeecccc
Confidence 35788899999999999999999852 57
Q ss_pred ceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEE
Q 042426 32 WEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVV 109 (270)
Q Consensus 32 ~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~ 109 (270)
|+||+++++.+ ++++ |++ +++ +++.+++++.|+|.++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+
T Consensus 142 ~aey~~v~~~~-~~~i-P~~--~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi 216 (369)
T cd08301 142 FSEYTVVHVGC-VAKI-NPE--APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRII 216 (369)
T ss_pred ceeEEEEeccc-EEEC-CCC--CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence 99999999999 9999 998 555 478888899999998878889999999999986 9999999999999999 899
Q ss_pred EEeCCHHHHHHHHHHhCCCceeecCCc-hhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccC-CEEEEEccccccc
Q 042426 110 GSARSKEKVDLLKHKFGFDDAFNYKEE-PDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRIC-GHIAVCGMISQYN 186 (270)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~ 186 (270)
++++++++.+.++ ++|++.++++.+. .++.+.+++.+++++|++|||+|.. .+..++++++++ |+++.+|.....
T Consensus 217 ~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~- 294 (369)
T cd08301 217 GVDLNPSKFEQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD- 294 (369)
T ss_pred EEcCCHHHHHHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC-
Confidence 9999999999998 8999888887652 1566777777666899999999875 688899999996 999999985421
Q ss_pred ccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEE
Q 042426 187 IEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQL 264 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~v 264 (270)
....++...+ .+++++.|+....+ ..+..++++++++.+|.++. .++++|+++|+++|++.+.+++.. |++
T Consensus 295 ---~~~~~~~~~~-~~~~~i~g~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~ 367 (369)
T cd08301 295 ---AVFSTHPMNL-LNGRTLKGTLFGGY--KPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCI 367 (369)
T ss_pred ---cccccCHHHH-hcCCeEEEEecCCC--ChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEE
Confidence 1112333333 36888988876543 22456889999999998765 467889999999999999998865 887
Q ss_pred E
Q 042426 265 V 265 (270)
Q Consensus 265 v 265 (270)
+
T Consensus 368 ~ 368 (369)
T cd08301 368 L 368 (369)
T ss_pred e
Confidence 6
No 30
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.1e-33 Score=239.58 Aligned_cols=248 Identities=23% Similarity=0.310 Sum_probs=201.1
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE 33 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~ 33 (270)
+++|+|.++|+++++|++||+|++. |+|+
T Consensus 63 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~a 142 (368)
T cd08300 63 EGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFS 142 (368)
T ss_pred ceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccce
Confidence 5678888899999999999999752 4799
Q ss_pred eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426 34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS 111 (270)
Q Consensus 34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~ 111 (270)
||+.++++. ++++ |++ +++ +++++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus 143 ey~~v~~~~-~~~i-P~~--l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~ 217 (368)
T cd08300 143 EYTVVAEIS-VAKI-NPE--APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGI 217 (368)
T ss_pred eEEEEchhc-eEeC-CCC--CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence 999999999 9999 998 555 488888899999999877788999999999985 9999999999999999 79999
Q ss_pred eCCHHHHHHHHHHhCCCceeecCCch-hHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEccccccccc
Q 042426 112 ARSKEKVDLLKHKFGFDDAFNYKEEP-DLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNIE 188 (270)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 188 (270)
++++++.+.++ ++|+++++++++.+ ++.+.+.+.+++++|++|||+|+ ..+..++++++++ |+++.+|.....
T Consensus 218 ~~~~~~~~~~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~--- 293 (368)
T cd08300 218 DINPDKFELAK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG--- 293 (368)
T ss_pred eCCHHHHHHHH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC---
Confidence 99999999998 99999999887641 47788888776689999999997 5889999999886 999999875311
Q ss_pred CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.....+...+. ++..+.++....+ ...+.+.++++++.+|++++ .++++|+++|+++|++.+.+++. .|++++
T Consensus 294 -~~~~~~~~~~~-~~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 294 -QEISTRPFQLV-TGRVWKGTAFGGW--KSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred -CccccCHHHHh-hcCeEEEEEeccc--CcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 11112222222 2345555544332 22467888999999999875 47789999999999999988765 588874
No 31
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.2e-33 Score=238.32 Aligned_cols=242 Identities=20% Similarity=0.215 Sum_probs=206.9
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
+++|+|.++|+++++|++||+|++ .|+|++|+.++++. ++++ |++
T Consensus 71 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~-~~~l-P~~-- 146 (351)
T cd08233 71 EFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYH-VHKL-PDN-- 146 (351)
T ss_pred cceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHH-eEEC-cCC--
Confidence 577889999999999999999985 38899999999999 9999 998
Q ss_pred ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceee
Q 042426 54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
++.+.+++..++.|||+++ ..+++++|++++|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.+++
T Consensus 147 ~~~~~aa~~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i~ 223 (351)
T cd08233 147 VPLEEAALVEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVLD 223 (351)
T ss_pred CCHHHhhhccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEC
Confidence 5654334447888999999 7788999999999985 9999999999999999 8999999999999998 899999999
Q ss_pred cCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426 133 YKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL 210 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (270)
+++. ++.+.+.+.+++ ++|+++||+|. ..+..++++++++|+++.+|.... ...++...++.+++++.+..
T Consensus 224 ~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~ 296 (351)
T cd08233 224 PTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLTGSI 296 (351)
T ss_pred CCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEEEEe
Confidence 8887 888888888776 79999999985 588999999999999999987541 12355667778899998876
Q ss_pred ccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccH-HHHHHHHhcCCcc-ceEEE
Q 042426 211 AGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKA-PSALVGIFTGQNV-GKQLV 265 (270)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~-~~a~~~~~~~~~~-gk~vv 265 (270)
... .+.++++.+++++|+++ +.+..+|+++|+ ++|++.+.+++.. +|+||
T Consensus 297 ~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 297 CYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred ccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 543 46789999999999995 456788999996 7999999998864 89987
No 32
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.2e-33 Score=236.65 Aligned_cols=243 Identities=18% Similarity=0.164 Sum_probs=202.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe--------------------------------------cccceeeEeecCCcccee
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEFSLIQSPQLLIK 46 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~ 46 (270)
+++|+|+++|+++++|++||+|+. .|+|+||++++++. +++
T Consensus 70 E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~ 148 (357)
T PLN02514 70 EVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKF-VVK 148 (357)
T ss_pred eeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHH-eEE
Confidence 567888889999999999999962 27899999999999 999
Q ss_pred ccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 042426 47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125 (270)
Q Consensus 47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~ 125 (270)
+ |++ ++. +++++++++.|||+++......++|++++|+|+ |++|++++|+|+.+|++|+++++++++.+.+.+++
T Consensus 149 i-P~~--~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~ 224 (357)
T PLN02514 149 I-PEG--MAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHL 224 (357)
T ss_pred C-CCC--CCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhc
Confidence 9 999 555 588899999999999977677789999999975 99999999999999999999998888777665479
Q ss_pred CCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcc
Q 042426 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI 204 (270)
Q Consensus 126 g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 204 (270)
|+++++++.+. ..+.+.+. ++|++|||+|. ..+..++++++++|+++.+|.... ...++...++.++.
T Consensus 225 Ga~~~i~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~ 293 (357)
T PLN02514 225 GADDYLVSSDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLGRK 293 (357)
T ss_pred CCcEEecCCCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhCCc
Confidence 99877765542 23333333 69999999996 588899999999999999997532 12355667778889
Q ss_pred eeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426 205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR 269 (270)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 269 (270)
++.|+.... ...++++++++++|++++.+ ++|+++|+++|++.+.+++..||++++++.
T Consensus 294 ~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 294 VITGSFIGS-----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred EEEEEecCC-----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 999887654 35788999999999998877 479999999999999999988999998754
No 33
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.3e-33 Score=236.16 Aligned_cols=243 Identities=19% Similarity=0.221 Sum_probs=202.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCC----
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDT---- 50 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~---- 50 (270)
+++|+|.++|++++.+ +||+|+. .|+|+||+.+++++ ++++ |+
T Consensus 60 E~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~-~~~i-p~~~~~ 136 (349)
T TIGR03201 60 EISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKG-LCVV-DEARLA 136 (349)
T ss_pred cceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHH-eEEC-Cccccc
Confidence 5778888899999987 9999975 28999999999999 9999 87
Q ss_pred --CCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 042426 51 --SVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF 127 (270)
Q Consensus 51 --~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~ 127 (270)
+ ++. ++++++.++.++|+++. ..++++|++|+|+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+
T Consensus 137 ~~~--~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga 211 (349)
T TIGR03201 137 AAG--LPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGA 211 (349)
T ss_pred ccC--CCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCC
Confidence 6 454 47888899999999985 478999999999998 99999999999999999999999999999998 8999
Q ss_pred CceeecCCc--hhHHHHHHhHcCC-Ccc----EEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHH
Q 042426 128 DDAFNYKEE--PDLDAALNRCFPE-GID----IYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQV 199 (270)
Q Consensus 128 ~~vi~~~~~--~~~~~~i~~~~~~-~~d----~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 199 (270)
++++++.+. .++.+.+.+.+++ ++| ++|||+|+. .++.++++++++|+++.+|.... ...++...+
T Consensus 212 ~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~ 285 (349)
T TIGR03201 212 DLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA------KTEYRLSNL 285 (349)
T ss_pred ceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC------CcccCHHHH
Confidence 988887653 1466777777776 776 899999985 67788999999999999997542 123445566
Q ss_pred HhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 200 VGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
+.++.++.+.+... .+.++++++++++|++.+ .+ +.|+++++++|++.+.+++..||+++++
T Consensus 286 ~~~~~~~~g~~~~~-----~~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 286 MAFHARALGNWGCP-----PDRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred hhcccEEEEEecCC-----HHHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence 66777887765432 467889999999999865 34 4789999999999999999899998853
No 34
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=4.7e-33 Score=235.53 Aligned_cols=246 Identities=20% Similarity=0.275 Sum_probs=201.2
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec--------------------------------------------------cccee
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL--------------------------------------------------TSWEE 34 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--------------------------------------------------g~~~~ 34 (270)
+++|+|.++|++++++++||+|++. |+|+|
T Consensus 62 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae 141 (365)
T cd08277 62 EGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQ 141 (365)
T ss_pred ceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCccccccccccccee
Confidence 5678888899999999999999762 68999
Q ss_pred eEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEe
Q 042426 35 FSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSA 112 (270)
Q Consensus 35 ~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~ 112 (270)
|++++++. ++++ |++ ++. ++++++++++|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|++++
T Consensus 142 ~~~v~~~~-~~~l-P~~--l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~ 216 (365)
T cd08277 142 YTVVDENY-VAKI-DPA--APLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVD 216 (365)
T ss_pred eEEEchhh-eEEC-CCC--CCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Confidence 99999999 9999 999 555 488889999999998877889999999999975 9999999999999999 799999
Q ss_pred CCHHHHHHHHHHhCCCceeecCCc-hhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEcccccccccC
Q 042426 113 RSKEKVDLLKHKFGFDDAFNYKEE-PDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNIEK 189 (270)
Q Consensus 113 ~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 189 (270)
+++++++.++ ++|++++++.++. .++.+.+.+.+++++|++|||+|+ ..+..++++++++ |+++.+|.....
T Consensus 217 ~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---- 291 (365)
T cd08277 217 INEDKFEKAK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA---- 291 (365)
T ss_pred CCHHHHHHHH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc----
Confidence 9999999998 8999988887653 135667777666689999999996 5778999999885 999999875421
Q ss_pred CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 190 PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
...++...+.. +.++.++....+ .....++++++++.++.+. +.++++|+++|+++|++.+.+++ ..|+++
T Consensus 292 -~~~~~~~~~~~-~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i 364 (365)
T cd08277 292 -ELSIRPFQLIL-GRTWKGSFFGGF--KSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI 364 (365)
T ss_pred -ccccCHhHHhh-CCEEEeeecCCC--ChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence 11233334443 778887766543 2235678999999999765 56788999999999999998887 458876
No 35
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.7e-33 Score=218.64 Aligned_cols=249 Identities=21% Similarity=0.269 Sum_probs=211.9
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe----------------------------------------------------cccc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG----------------------------------------------------LTSW 32 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~----------------------------------------------------~g~~ 32 (270)
|++|+|+.+|++|++|++||+|+. ..+|
T Consensus 68 EaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StF 147 (375)
T KOG0022|consen 68 EAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTF 147 (375)
T ss_pred cceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccc
Confidence 566888889999999999999942 1379
Q ss_pred eeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426 33 EEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS 111 (270)
Q Consensus 33 ~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~ 111 (270)
+||.+++... +.++ ++..|++ .+|.|.+...|+|.+..+.+++++|+++.|.|- |++|+++++-|+..|+ +++.+
T Consensus 148 sEYTVv~~~~-v~kI-d~~aPl~-kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgv 223 (375)
T KOG0022|consen 148 SEYTVVDDIS-VAKI-DPSAPLE-KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGV 223 (375)
T ss_pred eeEEEeecce-eEec-CCCCChh-heeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEE
Confidence 9999999999 9999 6665566 699999999999999989999999999999997 9999999999999999 99999
Q ss_pred eCCHHHHHHHHHHhCCCceeecCCch-hHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEccccccccc
Q 042426 112 ARSKEKVDLLKHKFGFDDAFNYKEEP-DLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNIE 188 (270)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 188 (270)
+-++++.+.++ ++|+++.+|..+.. .+.+.+.+++++|+|+-|||+|+ ..+++++.+...+ |+-+.+|....
T Consensus 224 DiN~~Kf~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~---- 298 (375)
T KOG0022|consen 224 DINPDKFEKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA---- 298 (375)
T ss_pred ecCHHHHHHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC----
Confidence 99999999999 99999899887432 48889999999999999999998 5889999999998 99999998654
Q ss_pred CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.......+..++. +.++.|+..+.+ ..+..+..+.+...++++. ..++..+||+++++||+.|.+++.. |.|+.
T Consensus 299 ~~~i~~~p~~l~~-GR~~~Gs~FGG~--K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 299 GQEISTRPFQLVT-GRTWKGSAFGGF--KSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred Ccccccchhhhcc-ccEEEEEecccc--cchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 2333444444444 667777776665 3467889999999999775 4688899999999999999999877 76665
No 36
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.8e-32 Score=234.39 Aligned_cols=247 Identities=20% Similarity=0.257 Sum_probs=207.1
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
+++|+|.++|++++.|++||+|++. |+|++|+++++.. ++++ |++
T Consensus 88 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~-l~~i-P~~-- 163 (393)
T cd08246 88 DASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQ-LMPK-PKH-- 163 (393)
T ss_pred ceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHH-eEEC-CCC--
Confidence 4678888899999999999999764 7899999999999 9999 999
Q ss_pred ccc-cccccCchhhhHHHHhhhh--cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce
Q 042426 54 LPY-YTGILGMPGLTAYGGLHEL--CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA 130 (270)
Q Consensus 54 ~~~-~~a~l~~~~~ta~~~l~~~--~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v 130 (270)
++. +++.++++++|||+++... ++++++++++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++++
T Consensus 164 l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G~~~~ 242 (393)
T cd08246 164 LSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALGAEGV 242 (393)
T ss_pred CCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCCEE
Confidence 555 4788999999999998655 68899999999999999999999999999999999999999999998 7999888
Q ss_pred eecCCch---------------------hHHHHHHhHcCC--CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccc
Q 042426 131 FNYKEEP---------------------DLDAALNRCFPE--GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNI 187 (270)
Q Consensus 131 i~~~~~~---------------------~~~~~i~~~~~~--~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 187 (270)
+++++.+ .+.+.+.+.+++ ++|+++||+|+..+..++++++++|+++.+|.....
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-- 320 (393)
T cd08246 243 INRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY-- 320 (393)
T ss_pred EcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC--
Confidence 8764320 245667776665 799999999988889999999999999999875421
Q ss_pred cCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcC-CccceEEEE
Q 042426 188 EKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTG-QNVGKQLVA 266 (270)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~ 266 (270)
....+...+..++.++.+.+... .+.+.++.++++++.+.+.+.++|++++++++++.+.++ +..||+++-
T Consensus 321 ---~~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 321 ---NHTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred ---CCCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 12244555667777787776543 356788999999999988777889999999999999998 788999874
No 37
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2.1e-32 Score=228.19 Aligned_cols=251 Identities=23% Similarity=0.263 Sum_probs=213.8
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec-----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL-----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP 78 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~ 78 (270)
+++|+|.++|++++.+++||+|++. |+|++|+.+++++ ++++ |++ ++. ++++++..++||| ++...+++
T Consensus 66 e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~--~~~~~a~~~~~~~~ta~-~~~~~~~~ 140 (324)
T cd08244 66 EVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDS-LHPV-PDG--LDLEAAVAVVHDGRTAL-GLLDLATL 140 (324)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHH-eEeC-CCC--CCHHHHhhhcchHHHHH-HHHHhcCC
Confidence 4678888899999999999999984 7999999999999 9999 998 554 4888999999996 45577889
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeC
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFEN 157 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~ 157 (270)
+++++++|+|++|++|++++++|+.+|++|+++++++++.+.++ ++|+++++++++. ++.+.+.+..++ ++|+++||
T Consensus 141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~ 218 (324)
T cd08244 141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDG 218 (324)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEEC
Confidence 99999999999999999999999999999999999999999997 8999888888876 788888877776 89999999
Q ss_pred CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCceee
Q 042426 158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGKLVY 236 (270)
Q Consensus 158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 236 (270)
+|+.....++++++++|+++.+|..+.. . ...+....+.+++++.+...... +....+.+.++.+++.++.+.+
T Consensus 219 ~g~~~~~~~~~~l~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 293 (324)
T cd08244 219 VGGAIGRAALALLAPGGRFLTYGWASGE----W-TALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVP 293 (324)
T ss_pred CChHhHHHHHHHhccCcEEEEEecCCCC----C-CccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccC
Confidence 9998889999999999999999875421 1 13444556788888888776543 2334567888999999999987
Q ss_pred eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 237 VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 237 ~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.+...++++++++|++.+.+++..||+++++
T Consensus 294 ~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 294 VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 7778899999999999999999999999864
No 38
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=1.7e-32 Score=235.20 Aligned_cols=250 Identities=16% Similarity=0.120 Sum_probs=196.3
Q ss_pred ccceEEEEeecCCC-CCCCCCEEEec-------------------ccceeeEeecCC----ccceeccCCCCCccccccc
Q 042426 5 SGYGVSKVLDSTHP-NYKKDDLVWGL-------------------TSWEEFSLIQSP----QLLIKILDTSVPLPYYTGI 60 (270)
Q Consensus 5 ~g~g~v~~vG~~v~-~~~~Gd~V~~~-------------------g~~~~~~~v~~~----~~~~~~~p~~~~~~~~~a~ 60 (270)
+++|+|.++|++|+ +|++||+|+.. |+|+||++++++ . ++++ |++ ++++.|+
T Consensus 69 E~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~-~~~l-P~~--l~~~~aa 144 (410)
T cd08238 69 EFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQD-CLLI-YEG--DGYAEAS 144 (410)
T ss_pred ccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCC-eEEC-CCC--CCHHHHh
Confidence 46788888999998 69999999762 899999999987 6 8999 998 6654333
Q ss_pred cCchhh---hHHHHh--------hhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHh-
Q 042426 61 LGMPGL---TAYGGL--------HELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC---YVVGSARSKEKVDLLKHKF- 125 (270)
Q Consensus 61 l~~~~~---ta~~~l--------~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~---~v~~~~~~~~~~~~~~~~~- 125 (270)
+..++. +++.++ ...+++++|++|+|+|++|++|++++|+|+.+|+ +|+++++++++++.++ ++
T Consensus 145 l~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~ 223 (410)
T cd08238 145 LVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLF 223 (410)
T ss_pred hcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-Hhc
Confidence 332322 233332 2457889999999999889999999999999864 8999999999999998 65
Q ss_pred -------CCC-ceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccc
Q 042426 126 -------GFD-DAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHN 195 (270)
Q Consensus 126 -------g~~-~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 195 (270)
|++ .++++++..++.+.+++.+++ ++|++||++|. ..+..++++++++|+++.++..... .....++
T Consensus 224 ~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~---~~~~~~~ 300 (410)
T cd08238 224 PPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDK---NFSAPLN 300 (410)
T ss_pred cccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCC---Ccccccc
Confidence 665 467765422688888888777 89999999985 6889999999999988776432110 1112355
Q ss_pred hHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426 196 LMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA 268 (270)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 268 (270)
...++.+++++.|+.... .+.++++++++.+|++++ .++.+|+++++++|++.+. ++..||+|+.++
T Consensus 301 ~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 301 FYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred HHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 667888999999876543 467889999999999987 6788999999999999999 778899999864
No 39
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2e-32 Score=231.61 Aligned_cols=245 Identities=20% Similarity=0.202 Sum_probs=199.8
Q ss_pred ccceEEEEeecCCCC------CCCCCEEEec-------------------------------------ccceeeEeecCC
Q 042426 5 SGYGVSKVLDSTHPN------YKKDDLVWGL-------------------------------------TSWEEFSLIQSP 41 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~------~~~Gd~V~~~-------------------------------------g~~~~~~~v~~~ 41 (270)
+++|+|.++|+++++ |++||+|+++ |+|++|++++++
T Consensus 61 e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 140 (361)
T cd08231 61 EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPG 140 (361)
T ss_pred CCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCC
Confidence 567889999999986 9999999764 789999999986
Q ss_pred -ccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 042426 42 -QLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKV 118 (270)
Q Consensus 42 -~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~ 118 (270)
+ ++++ |++ ++. ++++++++++|||+++.+...+++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.
T Consensus 141 ~~-~~~l-P~~--~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~ 215 (361)
T cd08231 141 TA-IVRV-PDN--VPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERL 215 (361)
T ss_pred Cc-eEEC-CCC--CCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 7 9999 988 554 477777999999999987777779999999974 9999999999999999 999999999999
Q ss_pred HHHHHHhCCCceeecCCchhH---HHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCc
Q 042426 119 DLLKHKFGFDDAFNYKEEPDL---DAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGV 193 (270)
Q Consensus 119 ~~~~~~~g~~~vi~~~~~~~~---~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 193 (270)
+.++ ++|++.++++++. ++ ...+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.... .....
T Consensus 216 ~~~~-~~g~~~vi~~~~~-~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~ 289 (361)
T cd08231 216 ELAR-EFGADATIDIDEL-PDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAP----AGTVP 289 (361)
T ss_pred HHHH-HcCCCeEEcCccc-ccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCC----CCccc
Confidence 9988 8999888877654 33 3567777776 89999999986 578899999999999999987542 11122
Q ss_pred cchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCC----ceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 194 HNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEG----KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
++...++.+++++.++...+ .+.++++++++.++ .+.+.+.++|+++++++|++.+.+++. +|+||+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 360 (361)
T cd08231 290 LDPERIVRKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVID 360 (361)
T ss_pred cCHHHHhhcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeC
Confidence 44445678889988887543 34567777777776 344567788999999999999988774 799985
No 40
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3e-32 Score=229.74 Aligned_cols=243 Identities=20% Similarity=0.230 Sum_probs=204.0
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec----------------------ccceeeEeecCCccceeccCCCCCccc-ccccc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL----------------------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGIL 61 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~----------------------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l 61 (270)
+++|+|.++|+++++|++||+|++. |++++|+.++++. ++++ |++ ++. +++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~~a~l 159 (350)
T cd08274 84 DIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAEN-AYPV-NSP--LSDVELATF 159 (350)
T ss_pred cceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHH-ceeC-CCC--CCHHHHHhc
Confidence 4678888899999999999999872 7899999999999 9999 998 554 58899
Q ss_pred CchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHH
Q 042426 62 GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDA 141 (270)
Q Consensus 62 ~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 141 (270)
++++.|||+++ ..+++++|++++|+|++|++|++++++|+.+|++++++++++ +.+.++ ++|++.+++.... .+.+
T Consensus 160 ~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~ 235 (350)
T cd08274 160 PCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTVILRDAP-LLAD 235 (350)
T ss_pred ccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEEEeCCCc-cHHH
Confidence 99999999998 678899999999999999999999999999999999998665 788887 8998766555443 3433
Q ss_pred HHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHH
Q 042426 142 ALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPK 220 (270)
Q Consensus 142 ~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (270)
.+.+.+ ++|++|||+|+..+..++++++++|+++.+|.... .....+...++.+++++.+..... .+
T Consensus 236 --~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 303 (350)
T cd08274 236 --AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTLFGSTLGT-----RE 303 (350)
T ss_pred --HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEEEEeecCC-----HH
Confidence 344444 89999999999889999999999999999986421 112345566677888888877643 56
Q ss_pred HHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 221 FLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 221 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.+.++.+++.++++.+.+...+++++++++++.+..++..+|+++++
T Consensus 304 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 304 VFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 78999999999999887778899999999999999888889999863
No 41
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=8.8e-32 Score=230.23 Aligned_cols=250 Identities=20% Similarity=0.236 Sum_probs=208.3
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
+++|+|.++|++++.|++||+|++. |+|+||+++++++ ++++ |++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~-~~~v-P~~-- 159 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQ-LMPK-PKH-- 159 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHH-eEEC-CCC--
Confidence 4678888899999999999999762 7899999999999 9999 998
Q ss_pred ccc-cccccCchhhhHHHHhhh--hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce
Q 042426 54 LPY-YTGILGMPGLTAYGGLHE--LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA 130 (270)
Q Consensus 54 ~~~-~~a~l~~~~~ta~~~l~~--~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v 130 (270)
++. +++.++..+++||+++.. .+++.+|++++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++.+
T Consensus 160 l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g~~~~ 238 (398)
T TIGR01751 160 LTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELGAEAV 238 (398)
T ss_pred CCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCCEE
Confidence 555 478888899999999865 477899999999999999999999999999999999988999999998 7999888
Q ss_pred eecCCc---------------------hhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEccccccccc
Q 042426 131 FNYKEE---------------------PDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIE 188 (270)
Q Consensus 131 i~~~~~---------------------~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 188 (270)
+|+++. ..+.+.+.+.+++ ++|++|||+|...+..++++++++|+++.+|.....
T Consensus 239 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~--- 315 (398)
T TIGR01751 239 IDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGY--- 315 (398)
T ss_pred ecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCC---
Confidence 886532 0244566667765 899999999988889999999999999999885432
Q ss_pred CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426 189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA 268 (270)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 268 (270)
....+...+..++.++.+..... .+.++++.++++++.+.+.+..++++++++++++.+.+++..||+|+++.
T Consensus 316 --~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 316 --NHDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred --CCCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 12234455556677777665443 24467899999999999887789999999999999999999999999875
Q ss_pred C
Q 042426 269 R 269 (270)
Q Consensus 269 ~ 269 (270)
.
T Consensus 389 ~ 389 (398)
T TIGR01751 389 A 389 (398)
T ss_pred C
Confidence 3
No 42
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=3.7e-32 Score=226.63 Aligned_cols=251 Identities=24% Similarity=0.305 Sum_probs=214.8
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
+++|.|.++|++++.+++||+|++. |+|++|+.++.+. ++++ |++ ++. +++.++..+++||+++...+++.+
T Consensus 63 e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~l-p~~--~~~~~~a~~~~~~~ta~~~~~~~~~~~~ 138 (323)
T cd05282 63 EGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADD-LIPV-PDS--ISDEQAAMLYINPLTAWLMLTEYLKLPP 138 (323)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEeCCCCcceeEEecCHHH-eEEC-CCC--CCHHHHHHHhccHHHHHHHHHHhccCCC
Confidence 5778888899999999999999986 7999999999999 9999 988 554 478888999999999988888999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG 159 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g 159 (270)
|++++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|+++++++++. ++...+.+.+++ ++|+++||+|
T Consensus 139 ~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g 216 (323)
T cd05282 139 GDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVG 216 (323)
T ss_pred CCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCC
Confidence 999999999999999999999999999999999999999997 8999988888776 777888888776 8999999999
Q ss_pred cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHHHHHCCce
Q 042426 160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVMLAIKEGKL 234 (270)
Q Consensus 160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~ 234 (270)
+......+++++++|+++.+|..... ....+...+..+++++.+.....+ +....+.+.++.+++.++.+
T Consensus 217 ~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 291 (323)
T cd05282 217 GESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVL 291 (323)
T ss_pred CHHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCc
Confidence 98888999999999999999875421 123344444448888888776543 23345678889999999999
Q ss_pred eeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.+.+...+++++++++++.+.+++..+|++++
T Consensus 292 ~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 292 TTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred ccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 88777889999999999999998888999874
No 43
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=3.6e-32 Score=229.47 Aligned_cols=240 Identities=18% Similarity=0.180 Sum_probs=187.4
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec---------------------------------ccceeeEeecCCccceeccCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------TSWEEFSLIQSPQLLIKILDT 50 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~~~~~~~~~p~ 50 (270)
-+++|+|+++|++ +.|++||+|+.. |+|+||++++++. ++++ |+
T Consensus 63 ~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~-~~~~-P~ 139 (355)
T cd08230 63 HEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEY-LVKV-PP 139 (355)
T ss_pred cccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEecccc-EEEC-CC
Confidence 3577888889999 999999999741 7799999999999 9999 99
Q ss_pred CCCccccccccCchhhhHHHHhhhh------cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHH
Q 042426 51 SVPLPYYTGILGMPGLTAYGGLHEL------CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR---SKEKVDLL 121 (270)
Q Consensus 51 ~~~~~~~~a~l~~~~~ta~~~l~~~------~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~---~~~~~~~~ 121 (270)
+ ++ +++++..++.+++.++... .+.++|++|+|+|+ |++|++++|+|+.+|++|+++++ ++++++.+
T Consensus 140 ~--~~-~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~ 215 (355)
T cd08230 140 S--LA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIV 215 (355)
T ss_pred C--CC-cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence 9 55 5666667777666554322 23568999999986 99999999999999999999987 67889988
Q ss_pred HHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccc----h
Q 042426 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHN----L 196 (270)
Q Consensus 122 ~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~ 196 (270)
+ ++|++. +++.+. ++.+ . + ..+++|++|||+|.+ .+..++++++++|+++.+|..... ....++ .
T Consensus 216 ~-~~Ga~~-v~~~~~-~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~ 285 (355)
T cd08230 216 E-ELGATY-VNSSKT-PVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFEVDGGELN 285 (355)
T ss_pred H-HcCCEE-ecCCcc-chhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----CccccChhhhh
Confidence 8 999986 566654 5544 2 1 223799999999974 789999999999999999975531 111122 3
Q ss_pred HHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCc------eeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 197 MQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGK------LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
..++.+++++.|+...+ .+.++++++++.++. +++.++++|+++|+++|++.+.++. +|+||++
T Consensus 286 ~~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 286 RDLVLGNKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred hhHhhcCcEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 45677899998876543 355777888888766 5667888999999999999987654 5999875
No 44
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=7.1e-32 Score=225.94 Aligned_cols=255 Identities=22% Similarity=0.287 Sum_probs=213.3
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
+++|.|.++|++++++++||+|+++ |+|++|++++.++ ++++ |++ ++. ++++++.++.+||+++...+.+++
T Consensus 65 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~a~~~~~~~~ta~~~l~~~~~~~~ 140 (334)
T PTZ00354 65 EVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGH-VMHI-PQG--YTFEEAAAIPEAFLTAWQLLKKHGDVKK 140 (334)
T ss_pred eeEEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEEecHHH-cEeC-CCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 5678888899999999999999997 8999999999999 9999 998 555 478899999999999988789999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchh-HHHHHHhHcCC-CccEEEeCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD-LDAALNRCFPE-GIDIYFENV 158 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~i~~~~~~-~~d~v~d~~ 158 (270)
|++++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++++++.... + +.+.+.+.+++ ++|++|||+
T Consensus 141 ~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~ 218 (334)
T PTZ00354 141 GQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCV 218 (334)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECC
Confidence 999999999999999999999999999888998999999997 8999888887765 4 77888887766 899999999
Q ss_pred CcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHHHHHCCc
Q 042426 159 GGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVMLAIKEGK 233 (270)
Q Consensus 159 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~ 233 (270)
++..+..++++++++|+++.++..... ....++...+..++.++.+...... +....+.++++.+++.++.
T Consensus 219 ~~~~~~~~~~~l~~~g~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (334)
T PTZ00354 219 GGSYLSETAEVLAVDGKWIVYGFMGGA----KVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGE 294 (334)
T ss_pred chHHHHHHHHHhccCCeEEEEecCCCC----cccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCC
Confidence 988999999999999999998864321 1111445555666667777655432 1122345678889999999
Q ss_pred eeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426 234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR 269 (270)
Q Consensus 234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 269 (270)
+.+.+...+++++++++++.+.+++..+|+|+++.+
T Consensus 295 l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~ 330 (334)
T PTZ00354 295 IKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE 330 (334)
T ss_pred ccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 988777889999999999999988888999998865
No 45
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=8.3e-32 Score=225.42 Aligned_cols=240 Identities=20% Similarity=0.256 Sum_probs=205.4
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
+++|+|.++|+++++|++||+|++ .|++++|+.++++. ++++ |++
T Consensus 61 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~-~~~l-p~~-- 136 (333)
T cd08296 61 EVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEA-LARI-PDD-- 136 (333)
T ss_pred ceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhh-eEeC-CCC--
Confidence 567888889999999999999975 27899999999999 9999 998
Q ss_pred ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426 54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
++. +++.+++++++||+++.. .+++++++|+|+| +|++|++++++|+.+|++|+++++++++.+.++ ++|++++++
T Consensus 137 ~~~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~ 213 (333)
T cd08296 137 LDAAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYID 213 (333)
T ss_pred CCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEec
Confidence 555 478899999999999865 4899999999999 699999999999999999999999999999997 899998998
Q ss_pred cCCchhHHHHHHhHcCCCccEEEeCCC-cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426 133 YKEEPDLDAALNRCFPEGIDIYFENVG-GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA 211 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (270)
+.+. ++.+.+.+. +++|+++|+.| ...+..++++++++|+++.+|.... ...++...++.+++++.+...
T Consensus 214 ~~~~-~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~ 284 (333)
T cd08296 214 TSKE-DVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPS 284 (333)
T ss_pred CCCc-cHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCc
Confidence 8876 677777665 36999999986 4688899999999999999987541 123455667789999998875
Q ss_pred cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.. .+.+..+.+++.++.+++.+ ..++++++++|++.+.+++..||+|++
T Consensus 285 ~~-----~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 285 GT-----ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred CC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 43 46678888899999988775 579999999999999999999999874
No 46
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=5.2e-32 Score=227.47 Aligned_cols=254 Identities=24% Similarity=0.284 Sum_probs=211.3
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP 78 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~ 78 (270)
.+++|+|.++|++++.|++||+|++. |+|++|+.++++. ++++ |++ ++. +++++++.++|||+++.....+
T Consensus 69 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~-~~~l-p~~--~~~~~aa~~~~~~~ta~~~l~~~~~~ 144 (341)
T cd08290 69 NEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADD-LIKV-PND--VDPEQAATLSVNPCTAYRLLEDFVKL 144 (341)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHH-eEeC-CCC--CCHHHHHHhhccHHHHHHHHHhhccc
Confidence 36788899999999999999999986 8999999999999 9999 998 555 5888899999999999877889
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHhCCCceeecCCc--hhHHHHHHhHcCCCcc
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK----EKVDLLKHKFGFDDAFNYKEE--PDLDAALNRCFPEGID 152 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~----~~~~~~~~~~g~~~vi~~~~~--~~~~~~i~~~~~~~~d 152 (270)
++|++|+|+|++|++|++++|+|+..|++++++++++ ++.+.++ ++|+++++++++. .++...+.+..++++|
T Consensus 145 ~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d 223 (341)
T cd08290 145 QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELRSLLATELLKSAPGGRPK 223 (341)
T ss_pred CCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccccccHHHHHHHHcCCCce
Confidence 9999999999999999999999999999999999776 6688887 8999988877652 1456666666555799
Q ss_pred EEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHH
Q 042426 153 IYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVML 227 (270)
Q Consensus 153 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 227 (270)
++|||+|+..+...+++++++|+++.+|..... ....+....+.+++++.+...... +....+.+.++.+
T Consensus 224 ~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (341)
T cd08290 224 LALNCVGGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAE 298 (341)
T ss_pred EEEECcCcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHH
Confidence 999999998888899999999999999864321 122444456788899888776432 2233457888999
Q ss_pred HHHCCceeeeeeeec---CcccHHHHHHHHhcCCccceEEEEe
Q 042426 228 AIKEGKLVYVEDIAE---GLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 228 ~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
++.+|.+.+....++ ++++++++++.+.+++..+|+|+++
T Consensus 299 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 299 LIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 999999988766677 9999999999999999999999874
No 47
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.4e-31 Score=227.52 Aligned_cols=251 Identities=17% Similarity=0.174 Sum_probs=190.7
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe---------------------------------------c-ccceeeEeecCC--c
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG---------------------------------------L-TSWEEFSLIQSP--Q 42 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------------------~-g~~~~~~~v~~~--~ 42 (270)
|++|+|+++|++|++|++||||.. + |+|+||+++++. +
T Consensus 68 E~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~ 147 (393)
T TIGR02819 68 EITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFN 147 (393)
T ss_pred eeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCc
Confidence 457778889999999999999943 1 789999999964 6
Q ss_pred cceeccCCCCCcc---ccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEE-EEEeCCHHHH
Q 042426 43 LLIKILDTSVPLP---YYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYV-VGSARSKEKV 118 (270)
Q Consensus 43 ~~~~~~p~~~~~~---~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v-~~~~~~~~~~ 118 (270)
++++ |++++.. ..++++..+++++|+++. .+++++|++|+|.|+ |++|++++|+|+.+|+++ ++++++++++
T Consensus 148 -l~~v-P~~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 148 -LLKF-PDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred -eEEC-CCcccccccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 9999 8874321 136788889999999984 578999999999765 999999999999999964 4455678899
Q ss_pred HHHHHHhCCCceeecC-CchhHHHHHHhHcCC-CccEEEeCCCcc---------------hHHHHHHccccCCEEEEEcc
Q 042426 119 DLLKHKFGFDDAFNYK-EEPDLDAALNRCFPE-GIDIYFENVGGK---------------MLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 119 ~~~~~~~g~~~vi~~~-~~~~~~~~i~~~~~~-~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~ 181 (270)
+.++ ++|++. +++. +. ++.+.+.+.+.+ ++|++|||+|.+ .++.++++++++|+++.+|.
T Consensus 224 ~~a~-~~Ga~~-v~~~~~~-~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~ 300 (393)
T TIGR02819 224 AQAR-SFGCET-VDLSKDA-TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGL 300 (393)
T ss_pred HHHH-HcCCeE-EecCCcc-cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeee
Confidence 9998 899974 5554 33 677778877776 899999999974 79999999999999999998
Q ss_pred cccccccC-------CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eee-eecCcccHHHHH
Q 042426 182 ISQYNIEK-------PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VED-IAEGLEKAPSAL 251 (270)
Q Consensus 182 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~-~~~~~~~~~~a~ 251 (270)
........ ....+.....+.++.++.+... ...+++.++++++.+|++.+ .++ ++|+++++++|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~-----~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~ 375 (393)
T TIGR02819 301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT-----PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGY 375 (393)
T ss_pred cCCcccccccccccccccccchHHhhccCceEEeccC-----ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHH
Confidence 53111000 0111223344455556655221 11244578999999999875 345 689999999999
Q ss_pred HHHhcCCccceEEEEec
Q 042426 252 VGIFTGQNVGKQLVAVA 268 (270)
Q Consensus 252 ~~~~~~~~~gk~vv~~~ 268 (270)
+.+.+++ .+|++++++
T Consensus 376 ~~~~~~~-~~Kvvi~~~ 391 (393)
T TIGR02819 376 AEFDAGA-AKKFVIDPH 391 (393)
T ss_pred HHHhhCC-ceEEEEeCC
Confidence 9998875 489999875
No 48
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=9.4e-32 Score=224.82 Aligned_cols=257 Identities=48% Similarity=0.802 Sum_probs=210.3
Q ss_pred cccceEEEEeecCCCCCCCCCEEEecccceeeEeecC-CccceeccCCCCCccc-cc-cccCchhhhHHHHhhhhcCCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPY-YT-GILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~~~p~~~~~~~-~~-a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
.+++|+|.++|++ .|++||+|+++++|++|+.+++ +. ++++ |++++.++ ++ +++++++.|||+++...+++.+
T Consensus 70 ~e~~G~V~~~G~~--~~~~Gd~V~~~~~~~~~~~v~~~~~-~~~l-P~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~ 145 (329)
T cd05288 70 GGGVGEVVESRSP--DFKVGDLVSGFLGWQEYAVVDGASG-LRKL-DPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKP 145 (329)
T ss_pred CceEEEEEecCCC--CCCCCCEEecccceEEEEEecchhh-cEEC-CcccCCCHHHHHHhcccHHHHHHHHHHhccCCCC
Confidence 3678888888964 7999999999999999999999 99 9999 98843122 34 4499999999999988888999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 160 (270)
+++++|+|++|++|++++|+++..|++|+++++++++.+.+++.+|+++++++++. ++.+.+.+.+++++|+++||+|+
T Consensus 146 ~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~ 224 (329)
T cd05288 146 GETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGG 224 (329)
T ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchH
Confidence 99999999999999999999999999999999999999999833999888888876 78778877765589999999999
Q ss_pred chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeee
Q 042426 161 KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240 (270)
Q Consensus 161 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 240 (270)
..+..++++++++|+++.+|..............+....+.+++++.+...........+.+.++.+++.+|.+.+....
T Consensus 225 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~ 304 (329)
T cd05288 225 EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDV 304 (329)
T ss_pred HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccc
Confidence 89999999999999999998654321100000233455667888888876654332334678889999999999877667
Q ss_pred ecCcccHHHHHHHHhcCCccceEEE
Q 042426 241 AEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 241 ~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
.+++++++++++.+.+++..||+++
T Consensus 305 ~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 305 VEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred cccHHHHHHHHHHHhcCCCccceeC
Confidence 7899999999999998888888874
No 49
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=2e-31 Score=223.51 Aligned_cols=247 Identities=18% Similarity=0.203 Sum_probs=200.9
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhc
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELC 76 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~ 76 (270)
.+++|.|.++|++++.|++||+|+++ |+|++|++++++. ++++ |++ +++ +++++++++.|||+++....
T Consensus 64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~aa~~~~~~~ta~~~l~~~~ 139 (336)
T TIGR02817 64 WDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERI-VGHK-PKS--LSFAEAAALPLTSITAWELLFDRL 139 (336)
T ss_pred eeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHH-cccC-CCC--CCHHHHhhhhHHHHHHHHHHHHhc
Confidence 35778888999999999999999985 7899999999999 9999 998 555 58899999999999998888
Q ss_pred CCCC-----CcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCC
Q 042426 77 SPKK-----GEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEG 150 (270)
Q Consensus 77 ~~~~-----g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~ 150 (270)
++++ |++|||+|++|++|++++|+|+.+ |++|+++++++++.+.++ ++|+++++++.. ++.+.+.+...++
T Consensus 140 ~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~ 216 (336)
T TIGR02817 140 GINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEA 216 (336)
T ss_pred CCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--CHHHHHHHhcCCC
Confidence 8887 999999999999999999999998 999999999999999997 899998888654 6777777754448
Q ss_pred ccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC---c--ccch--HHHH
Q 042426 151 IDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD---F--YHQY--PKFL 222 (270)
Q Consensus 151 ~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~--~~~~ 222 (270)
+|+++|++++ .....++++++++|+++.++... ..+...+..+++++.+..... . +... ...+
T Consensus 217 vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T TIGR02817 217 VSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLL 287 (336)
T ss_pred CCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccccchhhhhhhHHHH
Confidence 9999999854 68889999999999999874311 123333444556665533321 1 1111 2568
Q ss_pred HHHHHHHHCCceeeeeeeec---CcccHHHHHHHHhcCCccceEEEE
Q 042426 223 ELVMLAIKEGKLVYVEDIAE---GLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 223 ~~~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+++.+++.+|.+++.+...+ +++++++|++.+.+++..||++++
T Consensus 288 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 288 NRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 88999999999988765555 468999999999999989999875
No 50
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=3.4e-31 Score=222.45 Aligned_cols=242 Identities=23% Similarity=0.272 Sum_probs=204.1
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL 54 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~ 54 (270)
+++|+|.++|+++..|++||+|+++ |+|++|+.+++++ ++++ |++ +
T Consensus 64 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-P~~--l 139 (340)
T cd05284 64 ENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRR-LVKL-PRG--L 139 (340)
T ss_pred ceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHH-eEEC-CCC--C
Confidence 4678888899999999999999863 6899999999999 9999 998 5
Q ss_pred cc-cccccCchhhhHHHHhhhh-cCCCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCcee
Q 042426 55 PY-YTGILGMPGLTAYGGLHEL-CSPKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDDAF 131 (270)
Q Consensus 55 ~~-~~a~l~~~~~ta~~~l~~~-~~~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~vi 131 (270)
+. ++++++..+.|||+++... ..+.++++|+|+|+ +++|++++++|+.+| ++|+++++++++.+.++ ++|+++++
T Consensus 140 s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~ 217 (340)
T cd05284 140 DPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVL 217 (340)
T ss_pred CHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEE
Confidence 55 4899999999999999776 56888999999995 779999999999999 79999999999999997 99998888
Q ss_pred ecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426 132 NYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF 209 (270)
Q Consensus 132 ~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (270)
++++ .+...+.+..++ ++|+++||+|+ .....++++++++|+++.+|..+. ...+....+.+++++.+.
T Consensus 218 ~~~~--~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~ 288 (340)
T cd05284 218 NASD--DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGS 288 (340)
T ss_pred cCCc--cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEE
Confidence 8776 367778777766 89999999996 688999999999999999986431 123334445788888877
Q ss_pred cccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 210 LAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.... .+.+.++.+++.+|.+.+.+ ..++++++++|++.+.+++..||+++.+
T Consensus 289 ~~~~-----~~~~~~~~~~l~~g~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 289 LWGT-----RAELVEVVALAESGKVKVEI-TKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred eccc-----HHHHHHHHHHHHhCCCCcce-EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 6543 46788899999999988643 5789999999999999999999999763
No 51
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=9.3e-31 Score=219.89 Aligned_cols=245 Identities=22% Similarity=0.266 Sum_probs=208.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
+++|+|.++|++++.|++||+|++ .|++++|+.++++. ++++ |++
T Consensus 63 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~-~~~l-p~~-- 138 (341)
T cd08297 63 EGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARY-VTPI-PDG-- 138 (341)
T ss_pred ccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEecccc-EEEC-CCC--
Confidence 578899999999999999999975 37899999999999 9999 998
Q ss_pred ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426 54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
++. ++++++..++|||+++.. .+++++++++|+|+++++|++++++|+.+|++|+++++++++.+.++ ++|++++++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEc
Confidence 555 478899999999999865 58999999999999888999999999999999999999999999997 899998888
Q ss_pred cCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426 133 YKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL 210 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (270)
+++. ++.+.+.+..++ ++|+++|+.++ .....++++++++|+++.+|..+. .....+...+..+++++.+..
T Consensus 217 ~~~~-~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~ 290 (341)
T cd08297 217 FKKS-DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG-----GFIPLDPFDLVLRGITIVGSL 290 (341)
T ss_pred CCCc-cHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC-----CCCCCCHHHHHhcccEEEEec
Confidence 8876 788888887765 89999997664 688899999999999999987542 112344555667888887754
Q ss_pred ccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 211 AGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
... .+.++++.+++.++.+.+.+ ..+++++++++++.+..++..||+++++
T Consensus 291 ~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 291 VGT-----RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred cCC-----HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 432 47788999999999998755 5789999999999999999999999875
No 52
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=6e-31 Score=220.08 Aligned_cols=248 Identities=24% Similarity=0.233 Sum_probs=200.9
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe----------------------------------c-ccceeeEeecCCccceeccC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG----------------------------------L-TSWEEFSLIQSPQLLIKILD 49 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~----------------------------------~-g~~~~~~~v~~~~~~~~~~p 49 (270)
|++|+|.++| .++.+++||||.. + |+|+||+++|+++ ++++.|
T Consensus 62 E~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~-~~~~~p 139 (350)
T COG1063 62 EFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADF-NLAKLP 139 (350)
T ss_pred cceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEecccc-CeecCC
Confidence 5677888899 7788999999931 1 6899999999877 555427
Q ss_pred CCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC
Q 042426 50 TSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD 128 (270)
Q Consensus 50 ~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~ 128 (270)
++ ++.+.|+|..++++++++........++++++|+|+ |++|++++++++.+|+ +|++++.++++++.+++..|++
T Consensus 140 d~--~~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~ 216 (350)
T COG1063 140 DG--IDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGAD 216 (350)
T ss_pred CC--CChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCe
Confidence 77 455799999999999887545555666669999997 9999999999999998 8999999999999999347777
Q ss_pred ceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhccee
Q 042426 129 DAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICM 206 (270)
Q Consensus 129 ~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (270)
.+++..+. +....+.+.+.+ ++|++|||+|.. .+..++++++++|+++.+|..... ...++...++.+++++
T Consensus 217 ~~~~~~~~-~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~-----~~~~~~~~~~~kel~l 290 (350)
T COG1063 217 VVVNPSED-DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGE-----DIPLPAGLVVSKELTL 290 (350)
T ss_pred EeecCccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCc-----cCccCHHHHHhcccEE
Confidence 66666554 677778888888 999999999974 789999999999999999986532 1146678889999999
Q ss_pred eeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCc-cceEEEEe
Q 042426 207 EGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQN-VGKQLVAV 267 (270)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~ 267 (270)
.|+.... ....++.+++++.+|++.+ .++..++++++++|++.+.+++. ..|+++++
T Consensus 291 ~gs~~~~----~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 291 RGSLRPS----GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred EeccCCC----CcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9984311 1356899999999999976 45677899999999999998654 56888763
No 53
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=6.7e-31 Score=219.67 Aligned_cols=254 Identities=31% Similarity=0.526 Sum_probs=210.0
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec--ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGE 82 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~ 82 (270)
+++|+|..+|++++.|++||+|++. |+|++|+.++++. ++++ |++ .. ++++++.++.+||+++.+.+++++|+
T Consensus 67 e~~G~v~~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~-~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~ 141 (329)
T cd08250 67 EGVGEVVAVGEGVTDFKVGDAVATMSFGAFAEYQVVPARH-AVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGE 141 (329)
T ss_pred eeEEEEEEECCCCCCCCCCCEEEEecCcceeEEEEechHH-eEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCC
Confidence 4678888899999999999999987 8999999999999 9999 886 44 57889999999999998888999999
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcch
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKM 162 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 162 (270)
+++|+|++|++|++++++++..|++|+++++++++.+.++ ++|++.+++..+. ++.+.+.+..++++|++|||+|+..
T Consensus 142 ~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~ 219 (329)
T cd08250 142 TVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEM 219 (329)
T ss_pred EEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHH
Confidence 9999999999999999999999999999999999999997 8999888887765 6777776655458999999999988
Q ss_pred HHHHHHccccCCEEEEEcccccccccC-----CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeee
Q 042426 163 LDAVLLNMRICGHIAVCGMISQYNIEK-----PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV 237 (270)
Q Consensus 163 ~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 237 (270)
+..++++++++|+++.+|......... ..... ....+.+++++.+.....+.....+.+.++.+++.++.+.+.
T Consensus 220 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 298 (329)
T cd08250 220 FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATL-PPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCE 298 (329)
T ss_pred HHHHHHHhccCCeEEEEecccCCcccCcccccccccc-cHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeee
Confidence 999999999999999998754311000 00111 234567888888887654433345678889999999999874
Q ss_pred e--eeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 238 E--DIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 238 ~--~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+ ...++++++++|++.+.+++..+|++++
T Consensus 299 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 299 VDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 3 3458999999999999998888899874
No 54
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=7.4e-31 Score=222.47 Aligned_cols=248 Identities=24% Similarity=0.280 Sum_probs=209.1
Q ss_pred cccceEEEEeecCCCC---CCCCCEEEe--------------------------------------------------c-
Q 042426 4 LSGYGVSKVLDSTHPN---YKKDDLVWG--------------------------------------------------L- 29 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~---~~~Gd~V~~--------------------------------------------------~- 29 (270)
.+++|+|..+|+++++ |++||+|++ .
T Consensus 59 ~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (367)
T cd08263 59 HEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYS 138 (367)
T ss_pred cccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccccc
Confidence 3678999999999988 999999987 2
Q ss_pred -ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE
Q 042426 30 -TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY 107 (270)
Q Consensus 30 -g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~ 107 (270)
|++++|+.++++. ++++ |++ +++ ++++++.+++|||.++...+.+.++++++|+| +|++|++++++|+.+|++
T Consensus 139 ~g~~~~~~~~~~~~-~~~~-P~~--is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~ 213 (367)
T cd08263 139 MGGLAEYAVVPATA-LAPL-PES--LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGAS 213 (367)
T ss_pred CCcceeEEEechhh-EEEC-CCC--CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCC
Confidence 7899999999999 9999 999 555 58999999999999998888889999999996 699999999999999997
Q ss_pred -EEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEccccc
Q 042426 108 -VVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 108 -v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~ 184 (270)
+++++.++++.+.++ ++|++.++++++. ++...+.+..++ ++|+++|++++. ....++++++++|+++.++..+.
T Consensus 214 ~vi~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~ 291 (367)
T cd08263 214 PIIAVDVRDEKLAKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPG 291 (367)
T ss_pred eEEEEeCCHHHHHHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCC
Confidence 998988999999987 8999889988876 788888877665 899999999987 88999999999999999986442
Q ss_pred ccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCccce
Q 042426 185 YNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGK 262 (270)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk 262 (270)
. .....+...+..+++++.++.... ..+.++++.++++++.+.+. +...+++++++++++.+++++..||
T Consensus 292 ~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~ 363 (367)
T cd08263 292 G----ATAEIPITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGR 363 (367)
T ss_pred C----CccccCHHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccce
Confidence 1 122344455556788877743221 14678899999999998874 5578999999999999999998999
Q ss_pred EEEE
Q 042426 263 QLVA 266 (270)
Q Consensus 263 ~vv~ 266 (270)
+||+
T Consensus 364 ~~~~ 367 (367)
T cd08263 364 AIVE 367 (367)
T ss_pred eeeC
Confidence 9974
No 55
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.4e-31 Score=223.01 Aligned_cols=236 Identities=15% Similarity=0.122 Sum_probs=179.1
Q ss_pred CCcccceEEE---EeecCCCCCCCCCEEEec---------------------------ccceeeEeecCCccceeccCCC
Q 042426 2 QPLSGYGVSK---VLDSTHPNYKKDDLVWGL---------------------------TSWEEFSLIQSPQLLIKILDTS 51 (270)
Q Consensus 2 ~~i~g~g~v~---~vG~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~~~~~~p~~ 51 (270)
|.++|++.++ ++|. +.|++||+|+.. |+|+||+++++++ ++++ |++
T Consensus 59 P~i~GhE~~G~V~~~g~--~~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~v-P~~ 134 (341)
T cd08237 59 PMALIHEGIGVVVSDPT--GTYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDR-LVKL-PDN 134 (341)
T ss_pred CeeccceeEEEEEeeCC--CccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHH-eEEC-CCC
Confidence 4565555554 4444 479999999742 7899999999999 9999 999
Q ss_pred CCccccccccCchhhhHHHHhhhh--cCCCCCcEEEEecCCchHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHHHHHhCC
Q 042426 52 VPLPYYTGILGMPGLTAYGGLHEL--CSPKKGEYVYVSAASGAVGQLVGQFVKL-VG-CYVVGSARSKEKVDLLKHKFGF 127 (270)
Q Consensus 52 ~~~~~~~a~l~~~~~ta~~~l~~~--~~~~~g~~vlI~ga~g~vG~~ai~la~~-~g-~~v~~~~~~~~~~~~~~~~~g~ 127 (270)
++++.|+++.+++++|+++... ..+++|++|+|+|+ |++|++++|+++. .| .+|+++++++++++.++ +.+.
T Consensus 135 --l~~~~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~ 210 (341)
T cd08237 135 --VDPEVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADE 210 (341)
T ss_pred --CChHHhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCc
Confidence 6655566778999999988543 35688999999996 9999999999986 55 58999999999999988 6665
Q ss_pred CceeecCCchhHHHHHHhHcCCCccEEEeCCCc----chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhc
Q 042426 128 DDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG----KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR 203 (270)
Q Consensus 128 ~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 203 (270)
++.++ ++.+. .++|++||++|+ ..+..++++++++|+++.+|.... ...++...++.++
T Consensus 211 ~~~~~-----~~~~~------~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~ 273 (341)
T cd08237 211 TYLID-----DIPED------LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKG 273 (341)
T ss_pred eeehh-----hhhhc------cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCc
Confidence 43221 11111 159999999995 368899999999999999987431 1235566778899
Q ss_pred ceeeeccccCcccchHHHHHHHHHHHHCC-----ceeeeeeeecCcc---cHHHHHHHHhcCCccceEEEEec
Q 042426 204 ICMEGFLAGDFYHQYPKFLELVMLAIKEG-----KLVYVEDIAEGLE---KAPSALVGIFTGQNVGKQLVAVA 268 (270)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~---~~~~a~~~~~~~~~~gk~vv~~~ 268 (270)
+++.++.... .+.++++++++.++ .+++.++.+|+++ +++++++.+.++ ..||+||+++
T Consensus 274 ~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 274 LTLVGSSRST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred eEEEEecccC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 9999876533 45688899999998 5777888889986 455555555444 6899999875
No 56
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.3e-31 Score=221.44 Aligned_cols=228 Identities=14% Similarity=0.169 Sum_probs=176.7
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe------------cccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHh
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG------------LTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGL 72 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l 72 (270)
+++|+|+++|+++ +|++||+|+. .|+|+||++++++. ++++ |++ ++.+++.+ .++.|||+++
T Consensus 65 E~~G~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~-~~~i-p~~--~~~~~a~~-~~~~~a~~~~ 138 (308)
T TIGR01202 65 ESVGRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASR-VCRL-DPA--LGPQGALL-ALAATARHAV 138 (308)
T ss_pred eeEEEEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHH-ceeC-CCC--CCHHHHhh-hHHHHHHHHH
Confidence 3566677789998 5999999984 48999999999999 9999 988 55444444 4578999998
Q ss_pred hhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426 73 HELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI 151 (270)
Q Consensus 73 ~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~ 151 (270)
.+ . ..++++++|+|+ |++|++++|+|+.+|++ |+++..++++++.+. .+ .++|+.+ . .++++
T Consensus 139 ~~-~-~~~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~~---~~i~~~~--~--------~~~g~ 201 (308)
T TIGR01202 139 AG-A-EVKVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-GY---EVLDPEK--D--------PRRDY 201 (308)
T ss_pred Hh-c-ccCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-hc---cccChhh--c--------cCCCC
Confidence 54 3 346889999985 99999999999999996 555555666666554 32 3454422 1 12379
Q ss_pred cEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHH
Q 042426 152 DIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIK 230 (270)
Q Consensus 152 d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (270)
|++|||+|+. .++.++++++++|+++.+|.... ...++...++.+++++.++..+. .+.++++++++.
T Consensus 202 Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~ 270 (308)
T TIGR01202 202 RAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE------PVNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIE 270 (308)
T ss_pred CEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC------CcccccchhhhcceEEEEecccc-----hhHHHHHHHHHH
Confidence 9999999985 68999999999999999997432 12344556677888888765433 467899999999
Q ss_pred CCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 231 EGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 231 ~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+|++.+ .++.+|+++|+++|++.+.++...+|++++
T Consensus 271 ~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 271 SGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 999876 577899999999999998877777899874
No 57
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.9e-31 Score=217.34 Aligned_cols=243 Identities=21% Similarity=0.244 Sum_probs=201.4
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPK 79 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~ 79 (270)
.+++|+|.++|++++.|++||+|+++ |+|++|+.+++++ ++++ |++ ++. +++++++.+.|||+++......
T Consensus 57 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~a~~~~~~~~ta~~~~~~~~~~- 131 (305)
T cd08270 57 WDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGW-LAVL-PDG--VSFAQAATLPVAGVTALRALRRGGPL- 131 (305)
T ss_pred ceeEEEEEEeCCCCCCCCCCCEEEEecCCcceeeEEEEchHH-eEEC-CCC--CCHHHHHHhHhHHHHHHHHHHHhCCC-
Confidence 45778888999999999999999986 8999999999999 9999 998 555 5889999999999999776655
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
+|++++|+|++|++|++++++++.+|++|+.+++++++.+.++ ++|++..++... + ..++++|+++||+|
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g 201 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS--E-------LSGAPVDLVVDSVG 201 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc--c-------ccCCCceEEEECCC
Confidence 5999999999999999999999999999999999999999998 799875543221 1 12236999999999
Q ss_pred cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHh--hcceeeeccccCcccchHHHHHHHHHHHHCCceeee
Q 042426 160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVG--KRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV 237 (270)
Q Consensus 160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 237 (270)
+..+..++++++++|+++.+|.... .....+...+.. ++.++.++.... +....+.++.+.+++.++++.+.
T Consensus 202 ~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~ 275 (305)
T cd08270 202 GPQLARALELLAPGGTVVSVGSSSG-----EPAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPR 275 (305)
T ss_pred cHHHHHHHHHhcCCCEEEEEeccCC-----CcccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccce
Confidence 9888999999999999999987431 112233444443 578888777654 22345678899999999999987
Q ss_pred eeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 238 EDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 238 ~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
+..++++++++++++.+.+++..||+|+++
T Consensus 276 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 276 IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 778899999999999999999899999864
No 58
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=3.1e-31 Score=216.52 Aligned_cols=224 Identities=17% Similarity=0.202 Sum_probs=181.9
Q ss_pred ccceEEEEeecCCC------CCCCCCEEEe-------------------------------------cccceeeEeecCC
Q 042426 5 SGYGVSKVLDSTHP------NYKKDDLVWG-------------------------------------LTSWEEFSLIQSP 41 (270)
Q Consensus 5 ~g~g~v~~vG~~v~------~~~~Gd~V~~-------------------------------------~g~~~~~~~v~~~ 41 (270)
|++|+|+++|++|+ +|++||||.. .|+|+||++++++
T Consensus 5 E~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v~~~ 84 (280)
T TIGR03366 5 EIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHLPAG 84 (280)
T ss_pred ccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEEecCC
Confidence 67899999999999 8999999953 1789999999987
Q ss_pred -ccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHH
Q 042426 42 -QLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKV 118 (270)
Q Consensus 42 -~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~ 118 (270)
+ ++++ |++ +++ +++.+++.+.|+|+++.+ ....+|++|+|+|+ |++|++++|+|+.+|++ |++++++++++
T Consensus 85 ~~-~~~l-P~~--~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 85 TA-IVPV-PDD--LPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred Cc-EEEC-CCC--CCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 7 9999 999 555 478888899999999854 45669999999987 99999999999999995 88888899999
Q ss_pred HHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccch
Q 042426 119 DLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL 196 (270)
Q Consensus 119 ~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 196 (270)
+.++ ++|+++++++.+ ..+.+.+.+.+ ++|++||++|.. .++.++++++++|+++.+|.... .....++.
T Consensus 159 ~~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----~~~~~i~~ 230 (280)
T TIGR03366 159 ELAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFP----GGPVALDP 230 (280)
T ss_pred HHHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCC----CCceeeCH
Confidence 9998 999988887643 34455666665 899999999874 78899999999999999997431 11224567
Q ss_pred HHHHhhcceeeeccccCcccchHHHHHHHHHHHHCC--cee--eeeeeecCcccH
Q 042426 197 MQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEG--KLV--YVEDIAEGLEKA 247 (270)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~--~~~~~~~~~~~~ 247 (270)
..++.+++++.|+.... .+.++++++++.++ ++. +.++.+||++|+
T Consensus 231 ~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 231 EQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred HHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 77888999999886543 46788999999875 333 457778888763
No 59
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.3e-30 Score=219.64 Aligned_cols=244 Identities=18% Similarity=0.231 Sum_probs=205.0
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL 54 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~ 54 (270)
+++|.|.++|++++++++||+|+++ |++++|+.++.++ ++++ |++ +
T Consensus 73 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~ 148 (350)
T cd08240 73 EIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSR-YLVD-PGG--L 148 (350)
T ss_pred ceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHH-eeeC-CCC--C
Confidence 4678888899999999999999863 7899999999999 9999 998 5
Q ss_pred cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceee
Q 042426 55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
++ +++++++.++|||+++.....++++++|+|+| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.+++
T Consensus 149 s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~ 226 (350)
T cd08240 149 DPALAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADVVVN 226 (350)
T ss_pred CHHHeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcEEec
Confidence 55 58889999999999998877777899999996 59999999999999999 7999998999999997 899988888
Q ss_pred cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426 133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA 211 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (270)
.++. ++.+.+.+..++++|+++|++|. ..+..++++|+++|+++.+|..... ...+......+++++.+...
T Consensus 227 ~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~ 299 (350)
T cd08240 227 GSDP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSYV 299 (350)
T ss_pred CCCc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEccc
Confidence 7776 67677776655589999999985 6889999999999999999875421 11223334447788877766
Q ss_pred cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.. .+++.++.++++++.+.+.+...+++++++++++.+.+++..||++++
T Consensus 300 ~~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 300 GS-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred CC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 54 367888999999999987766789999999999999999889999975
No 60
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=1.3e-30 Score=217.83 Aligned_cols=252 Identities=20% Similarity=0.200 Sum_probs=203.7
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP 78 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~ 78 (270)
.+++|.|..+|++++.+++||+|++. |+|++|+.++++. ++++ |++ +++ +++.++..+++||.++...+++
T Consensus 63 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~-~~~l-p~~--~~~~~~~~~~~~~~ta~~~l~~~~~~ 138 (327)
T PRK10754 63 TEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADK-AAIL-PDA--ISFEQAAASFLKGLTVYYLLRKTYEI 138 (327)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHH-ceeC-CCC--CCHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 35678888999999999999999754 8999999999999 9999 988 555 4777888999999998888899
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeC
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFEN 157 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~ 157 (270)
++|++++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++++++.++. ++.+.+.+.+++ ++|+++||
T Consensus 139 ~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~ 216 (327)
T PRK10754 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDS 216 (327)
T ss_pred CCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEEC
Confidence 99999999999999999999999999999999999999999997 8999888888776 788888888876 89999999
Q ss_pred CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcce-eeeccccCc---ccchHHHHHHHHHHHHCCc
Q 042426 158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRIC-MEGFLAGDF---YHQYPKFLELVMLAIKEGK 233 (270)
Q Consensus 158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~g~ 233 (270)
+|+.....++++++++|+++.+|.... .....+...+..++.. ......... +....+.+.++.+++.+|.
T Consensus 217 ~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 291 (327)
T PRK10754 217 VGKDTWEASLDCLQRRGLMVSFGNASG-----PVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGV 291 (327)
T ss_pred CcHHHHHHHHHHhccCCEEEEEccCCC-----CCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCC
Confidence 998888999999999999999987542 1111222222222211 111111111 2233455677899999999
Q ss_pred eeee--eeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 234 LVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 234 ~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+++. ....|++++++++++.+.+++..+|+|+.
T Consensus 292 l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 292 IKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred eeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 9864 35789999999999999999999999985
No 61
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.5e-30 Score=220.27 Aligned_cols=248 Identities=22% Similarity=0.340 Sum_probs=205.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe----------------------------------------------------cccc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG----------------------------------------------------LTSW 32 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~----------------------------------------------------~g~~ 32 (270)
+++|+|.++|+++++|++||+|++ .|+|
T Consensus 62 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 141 (365)
T cd08278 62 EGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSF 141 (365)
T ss_pred ceeEEEEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccce
Confidence 577888999999999999999983 1789
Q ss_pred eeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEE
Q 042426 33 EEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVG 110 (270)
Q Consensus 33 ~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~ 110 (270)
++|+++++++ ++++ |++ ++. +++.++++++||+.++...+.++++++|+|+|+ |++|++++|+|+..|+ .+++
T Consensus 142 ~~y~~v~~~~-~~~i-P~~--~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~ 216 (365)
T cd08278 142 ATYAVVHERN-VVKV-DKD--VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIA 216 (365)
T ss_pred eeEEEecchh-EEEC-CCC--CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE
Confidence 9999999999 9999 999 555 488999999999999888889999999999975 9999999999999999 6888
Q ss_pred EeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccC
Q 042426 111 SARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEK 189 (270)
Q Consensus 111 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 189 (270)
+++++++.+.++ ++|++.++++++. ++.+.+.+.+++++|+++||+|+ ..+..++++++++|+++.+|..+. .
T Consensus 217 ~~~~~~k~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~ 290 (365)
T cd08278 217 VDIVDSRLELAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPP----G 290 (365)
T ss_pred EeCCHHHHHHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCC----C
Confidence 888999999887 8999988888776 77788887773389999999986 578999999999999999987531 1
Q ss_pred CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee-eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 190 PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY-VEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+....+...++.+++++.++..... ...+.++++.++++++.+.+ .+...++++++++|++.+.+++.. |++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 291 AEVTLDVNDLLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred CccccCHHHHhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 2223555666678888887765432 22467888999999999854 244679999999999999887654 77763
No 62
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.3e-30 Score=217.80 Aligned_cols=248 Identities=20% Similarity=0.243 Sum_probs=208.4
Q ss_pred cccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCC--ccceeccCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSP--QLLIKILDTS 51 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~--~~~~~~~p~~ 51 (270)
.+++|.|..+|++++.|++||+|++ .|+|++|+++++. + ++++ |++
T Consensus 60 ~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~i-P~~ 137 (345)
T cd08260 60 HEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVN-LVRL-PDD 137 (345)
T ss_pred cceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCc-eEEC-CCC
Confidence 3577888889999999999999986 2889999999974 7 9999 999
Q ss_pred CCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce
Q 042426 52 VPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA 130 (270)
Q Consensus 52 ~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v 130 (270)
++. ++++++.+++|||+++...+++.++++++|+| +|++|++++++|+.+|++|+++++++++.+.++ ++|++++
T Consensus 138 --~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~ 213 (345)
T cd08260 138 --VDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVAT 213 (345)
T ss_pred --CCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEE
Confidence 554 48888999999999987788899999999999 699999999999999999999999999999997 8999989
Q ss_pred eecCC-chhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeee
Q 042426 131 FNYKE-EPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEG 208 (270)
Q Consensus 131 i~~~~-~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (270)
+++++ . ++.+.+.+...+++|++|||+|+ ..+..++++++++|+++.+|...... .....+...+..+++++.+
T Consensus 214 i~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~ 289 (345)
T cd08260 214 VNASEVE-DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEE---AGVALPMDRVVARELEIVG 289 (345)
T ss_pred Eccccch-hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCC---CccccCHHHHhhcccEEEe
Confidence 98887 5 77777877765589999999985 67889999999999999998754321 1123445555577888887
Q ss_pred ccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 209 FLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
..... .+.++++.+++.++.+.+. +...+++++++++++.+++++..||+|++
T Consensus 290 ~~~~~-----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 290 SHGMP-----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred CCcCC-----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 66532 4678889999999998764 56788999999999999999999999874
No 63
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.3e-30 Score=219.70 Aligned_cols=247 Identities=19% Similarity=0.201 Sum_probs=197.7
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe---------------------------------cccceeeEeecCC--ccceeccC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG---------------------------------LTSWEEFSLIQSP--QLLIKILD 49 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~~~p 49 (270)
+++|+|.++|+++++|++||+|++ .|+|+||+.++.+ . ++++ |
T Consensus 60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~-~~~l-P 137 (351)
T cd08285 60 EAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADAN-LAPL-P 137 (351)
T ss_pred ceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCc-eEEC-C
Confidence 567888889999999999999986 2789999999974 7 9999 9
Q ss_pred CCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC
Q 042426 50 TSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF 127 (270)
Q Consensus 50 ~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~ 127 (270)
++ ++. +++.++.++.|||+++ ..+++++|++|||+| +|++|++++|+|+.+|+ .++++++++++.+.++ ++|+
T Consensus 138 ~~--~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~ 212 (351)
T cd08285 138 DG--LTDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGA 212 (351)
T ss_pred CC--CCHHHhhhhccchhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCC
Confidence 88 555 4788888999999996 678899999999997 59999999999999999 5888888888998888 8999
Q ss_pred CceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccch--HHHHhhc
Q 042426 128 DDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL--MQVVGKR 203 (270)
Q Consensus 128 ~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~ 203 (270)
++++++++. ++.+.+.+...+ ++|+++||+|+ ..+..++++++++|+++.+|..... .....+. .....+.
T Consensus 213 ~~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~ 287 (351)
T cd08285 213 TDIVDYKNG-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGED----DYLPIPREEWGVGMGH 287 (351)
T ss_pred ceEecCCCC-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC----ceeecChhhhhhhccc
Confidence 999988876 788888877766 89999999997 5789999999999999999875421 1111111 1112234
Q ss_pred ceeeeccccCcccchHHHHHHHHHHHHCCceee---eeeeecCcccHHHHHHHHhcCC-ccceEEEEe
Q 042426 204 ICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY---VEDIAEGLEKAPSALVGIFTGQ-NVGKQLVAV 267 (270)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~ 267 (270)
.++.+.... ...+.++++.+++++|++++ .+...++++++++|++.+++++ ...|++|++
T Consensus 288 ~~i~~~~~~----~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 288 KTINGGLCP----GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred cEEEEeecC----CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 444433221 12366888999999999988 3445689999999999999987 468999874
No 64
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.98 E-value=4.2e-30 Score=213.48 Aligned_cols=252 Identities=25% Similarity=0.346 Sum_probs=211.7
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPK 79 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~ 79 (270)
.+++|.|..+|+++++|++||+|+++ |++++|+.++++. ++++ |++ ++. ++++++..++++|+++...++++
T Consensus 60 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~l~~~~~~~ 135 (320)
T cd05286 60 VEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASR-LVKL-PDG--ISDETAAALLLQGLTAHYLLRETYPVK 135 (320)
T ss_pred cceeEEEEEECCCCCCCCCCCEEEEecCCCceeEEEEecHHH-ceeC-CCC--CCHHHHhhccchHHHHHHHHHHhcCCC
Confidence 35678888899999999999999985 7999999999999 9999 988 554 47888999999999998888999
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENV 158 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~ 158 (270)
+|++++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++++++..+. ++.+.+.+.+.+ ++|+++||+
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~ 213 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGV 213 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECC
Confidence 9999999999999999999999999999999999999999997 8999888887776 787888887766 899999999
Q ss_pred CcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc---ccchHHHHHHHHHHHHCCcee
Q 042426 159 GGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF---YHQYPKFLELVMLAIKEGKLV 235 (270)
Q Consensus 159 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~ 235 (270)
++.....++++++++|+++.+|.... .....+...+..+++++.+.....+ +....+.+.++.+++.++.+.
T Consensus 214 ~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 288 (320)
T cd05286 214 GKDTFEGSLDSLRPRGTLVSFGNASG-----PVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLK 288 (320)
T ss_pred CcHhHHHHHHhhccCcEEEEEecCCC-----CCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCc
Confidence 98888999999999999999987442 1122334444477888765544332 233446677889999999988
Q ss_pred eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 236 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 236 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+.....|++++++++++.+.+++..+|++++
T Consensus 289 ~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 289 VEIGKRYPLADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred CcccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 7766789999999999999998888999985
No 65
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.98 E-value=2.6e-30 Score=217.65 Aligned_cols=244 Identities=23% Similarity=0.191 Sum_probs=201.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe-------------------------------c--ccceeeEeecCC--ccceeccC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------L--TSWEEFSLIQSP--QLLIKILD 49 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~--g~~~~~~~v~~~--~~~~~~~p 49 (270)
+++|+|.++|+++++|++||+|++ . |+|++|++++++ + ++++ |
T Consensus 61 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P 138 (347)
T cd05278 61 EFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMN-LAKI-P 138 (347)
T ss_pred ceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCe-EEEC-C
Confidence 567888889999999999999986 2 789999999987 7 9999 9
Q ss_pred CCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC
Q 042426 50 TSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF 127 (270)
Q Consensus 50 ~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~ 127 (270)
++ ++. ++++++.+++|||+++ ...+++++++|+|.|+ |++|++++|+|+.+|+ +++++.+++++.+.++ ++|+
T Consensus 139 ~~--~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~ 213 (347)
T cd05278 139 DG--LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGA 213 (347)
T ss_pred CC--CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCC
Confidence 98 555 4888999999999998 6788999999999765 9999999999999997 8989888888888888 8999
Q ss_pred CceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcce
Q 042426 128 DDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRIC 205 (270)
Q Consensus 128 ~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (270)
+.++++++. ++.+.+.+.+++ ++|++||++++ ..+..++++++++|+++.+|..... .........+.++++
T Consensus 214 ~~vi~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~ 287 (347)
T cd05278 214 TDIINPKNG-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP-----DPLPLLGEWFGKNLT 287 (347)
T ss_pred cEEEcCCcc-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC-----cccCccchhhhceeE
Confidence 889988876 788888887765 89999999987 6889999999999999999854321 100112233467777
Q ss_pred eeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCc-cceEEEE
Q 042426 206 MEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQN-VGKQLVA 266 (270)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~ 266 (270)
+.+..... .+.++++.+++.++.+.+. +...+++++++++++.+.+++. .+|+|++
T Consensus 288 ~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 288 FKTGLVPV-----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred EEeeccCc-----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 77654322 5678899999999999864 4578899999999999988776 7899875
No 66
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.98 E-value=3.4e-30 Score=214.41 Aligned_cols=247 Identities=21% Similarity=0.267 Sum_probs=201.9
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE 74 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~ 74 (270)
+++|.|.++|+ ..+++||+|+++ |+|++|+.++++. ++++ |++ +++ ++++++.++++||.++.+
T Consensus 63 e~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~--~~~~~aa~~~~~~~ta~~~l~~ 136 (320)
T cd08243 63 EAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQ-VYAI-DSD--LSWAELAALPETYYTAWGSLFR 136 (320)
T ss_pred eeEEEEEEecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHH-cEeC-CCC--CCHHHHHhcchHHHHHHHHHHH
Confidence 57788888995 579999999986 7899999999999 9999 988 555 489999999999999988
Q ss_pred hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEE
Q 042426 75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIY 154 (270)
Q Consensus 75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v 154 (270)
..++++|++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++. .. ++.+.+.+. ++++|++
T Consensus 137 ~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~v 212 (320)
T cd08243 137 SLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAEQLRAA-PGGFDKV 212 (320)
T ss_pred hcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHHHHh-CCCceEE
Confidence 888999999999999999999999999999999999999999999997 8999877654 44 677777777 4489999
Q ss_pred EeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCce
Q 042426 155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL 234 (270)
Q Consensus 155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 234 (270)
+||+|+..+..++++++++|+++.+|.............. ....+.+++++.+...... ..+.++++.+++.++.+
T Consensus 213 l~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 288 (320)
T cd08243 213 LELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPM-DDIPSGVNLTLTGSSSGDV---PQTPLQELFDFVAAGHL 288 (320)
T ss_pred EECCChHHHHHHHHHhccCCEEEEEccCCCCcccCCcchh-hhhhhccceEEEecchhhh---hHHHHHHHHHHHHCCce
Confidence 9999998899999999999999999874321100010011 1111356677766654332 13568889999999999
Q ss_pred eeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
++.+...++++++++|++.+.+++..+|+++
T Consensus 289 ~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 289 DIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred ecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 8876688999999999999999888889886
No 67
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.98 E-value=1.6e-31 Score=237.19 Aligned_cols=241 Identities=20% Similarity=0.229 Sum_probs=211.4
Q ss_pred CCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHH
Q 042426 20 YKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQ 95 (270)
Q Consensus 20 ~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~ 95 (270)
-+-|.|||++ -++++.+.++.++ +|.+ |.. +.. +|++.|+.|.|+|++|..+++.++|++||||+++||+|+
T Consensus 1492 d~~GrRvM~mvpAksLATt~l~~rd~-lWev-P~~--WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQ 1567 (2376)
T KOG1202|consen 1492 DASGRRVMGMVPAKSLATTVLASRDF-LWEV-PSK--WTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQ 1567 (2376)
T ss_pred cCCCcEEEEeeehhhhhhhhhcchhh-hhhC-Ccc--cchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhH
Confidence 4678999998 6899999999999 9999 988 666 599999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---CceeecCCchhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccc
Q 042426 96 LVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---DDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMR 171 (270)
Q Consensus 96 ~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~ 171 (270)
++|.+|-..|++|+.++.|.++++++.++|.. .+.-|.++. +|..-+.+.+.| |+|+|++....+.++.+++||+
T Consensus 1568 AAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa 1646 (2376)
T KOG1202|consen 1568 AAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLA 1646 (2376)
T ss_pred HHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999977764 456677776 999999999999 9999999999999999999999
Q ss_pred cCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHH----HCCceeeeeeeecCcccH
Q 042426 172 ICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAI----KEGKLVYVEDIAEGLEKA 247 (270)
Q Consensus 172 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~ 247 (270)
.+||+..+|..+- ......--..+.+|.+++|.-+..+.+...+.+.++..++ ++|.++|+.+.+|+-+++
T Consensus 1647 ~~GRFLEIGKfDL-----SqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qv 1721 (2376)
T KOG1202|consen 1647 LHGRFLEIGKFDL-----SQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQV 1721 (2376)
T ss_pred hcCeeeeecceec-----ccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHH
Confidence 9999999997553 2222334467889999999999888666666676666655 556889999999999999
Q ss_pred HHHHHHHhcCCccceEEEEecCC
Q 042426 248 PSALVGIFTGQNVGKQLVAVARE 270 (270)
Q Consensus 248 ~~a~~~~~~~~~~gk~vv~~~~~ 270 (270)
++||+.|.+++.+||+|+++-+|
T Consensus 1722 E~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1722 EDAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred HHHHHHHhccCccceEEEEEccc
Confidence 99999999999999999998543
No 68
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.98 E-value=6.6e-30 Score=217.74 Aligned_cols=246 Identities=21% Similarity=0.212 Sum_probs=202.6
Q ss_pred cccceEEEEeecCCCCCCCCCEEEe--------------------------------------------------cccce
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------------------LTSWE 33 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------------------~g~~~ 33 (270)
.+++|+|.++|+++++|++||+|++ .|+|+
T Consensus 60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 139 (386)
T cd08283 60 HEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQA 139 (386)
T ss_pred ccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeE
Confidence 3678899999999999999999975 26889
Q ss_pred eeEeecCC--ccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEE
Q 042426 34 EFSLIQSP--QLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVV 109 (270)
Q Consensus 34 ~~~~v~~~--~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~ 109 (270)
+|++++++ . ++++ |++ ++. ++++++..++|||+++ ..+++++|++|+|+|+ |++|++++++|+.+|+ +|+
T Consensus 140 ~~~~v~~~~~~-~~~l-p~~--~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi 213 (386)
T cd08283 140 EYVRVPFADVG-PFKI-PDD--LSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVI 213 (386)
T ss_pred EEEEcccccCe-EEEC-CCC--CCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence 99999988 7 9999 998 665 4888899999999999 7889999999999974 9999999999999998 699
Q ss_pred EEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc----------------------hHHHH
Q 042426 110 GSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK----------------------MLDAV 166 (270)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~----------------------~~~~~ 166 (270)
++++++++.+.++ +++...++++.+.+++.+.+.+.+++ ++|++|||+|+. .+..+
T Consensus 214 ~~~~~~~~~~~~~-~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (386)
T cd08283 214 AIDRVPERLEMAR-SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREA 292 (386)
T ss_pred EEcCCHHHHHHHH-HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHH
Confidence 9999999999998 66333577776641377888887776 899999999753 57889
Q ss_pred HHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCc
Q 042426 167 LLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGL 244 (270)
Q Consensus 167 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~ 244 (270)
+++++++|+++.+|.... .....+....+.+++++.+.... ..+.++++.+++.++++.+. +...+++
T Consensus 293 ~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~~~~l 362 (386)
T cd08283 293 IQAVRKGGTVSIIGVYGG-----TVNKFPIGAAMNKGLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITHRLPL 362 (386)
T ss_pred HHHhccCCEEEEEcCCCC-----CcCccCHHHHHhCCcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEEEecH
Confidence 999999999999987542 12234455667888888886532 25678889999999999863 5578999
Q ss_pred ccHHHHHHHHhcCC-ccceEEEE
Q 042426 245 EKAPSALVGIFTGQ-NVGKQLVA 266 (270)
Q Consensus 245 ~~~~~a~~~~~~~~-~~gk~vv~ 266 (270)
+++++|++.+.++. ..+|++++
T Consensus 363 ~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 363 EDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred HHHHHHHHHHHhCCCCeEEEEec
Confidence 99999999998876 56899985
No 69
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.98 E-value=9.5e-30 Score=213.41 Aligned_cols=243 Identities=17% Similarity=0.177 Sum_probs=202.1
Q ss_pred cccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
.+++|+|..+|++++.|++||+|++ .|+|++|+.++++ ++++ |++
T Consensus 59 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~-p~~-- 133 (337)
T cd08261 59 HELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD--ALLV-PEG-- 133 (337)
T ss_pred cccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh--eEEC-CCC--
Confidence 3567899999999999999999986 3789999999987 8899 999
Q ss_pred cccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426 54 LPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 54 ~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
++++ ++++ ..++++++++ ...++.+|++|||+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++
T Consensus 134 ~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~ 209 (337)
T cd08261 134 LSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTIN 209 (337)
T ss_pred CCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEec
Confidence 5554 5555 5778888887 778999999999996 599999999999999999999998999999997 899999999
Q ss_pred cCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426 133 YKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL 210 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (270)
+++. ++.+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.+|.... ....+...+..+++++.+..
T Consensus 210 ~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------~~~~~~~~~~~~~~~~~~~~ 282 (337)
T cd08261 210 VGDE-DVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------PVTFPDPEFHKKELTILGSR 282 (337)
T ss_pred Cccc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------CCccCHHHHHhCCCEEEEec
Confidence 8887 788888887776 89999999976 578899999999999999886441 11233445555677776653
Q ss_pred ccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcC-CccceEEEEe
Q 042426 211 AGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTG-QNVGKQLVAV 267 (270)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~~ 267 (270)
. ...+.++++.+++.+|.+++ .+..++++++++++++.+.++ ...+|+|+++
T Consensus 283 ~-----~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 283 N-----ATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred c-----CChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 2 23567888999999999987 666889999999999999988 4789999874
No 70
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.98 E-value=3.2e-30 Score=212.84 Aligned_cols=249 Identities=19% Similarity=0.258 Sum_probs=205.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec-----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL-----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP 78 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~ 78 (270)
+++|.|.++|+++++|++||+|+++ |+|++|+.++++. ++++ |++ ++. ++++++..+++||+++ +..++
T Consensus 44 e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~aa~~~~~~~ta~~~l-~~~~~ 118 (303)
T cd08251 44 EASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPEDQ-VVRK-PAS--LSFEEACALPVVFLTVIDAF-ARAGL 118 (303)
T ss_pred eeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEEccHHH-eEEC-CCC--CCHHHHHHhHHHHHHHHHHH-HhcCC
Confidence 5678888899999999999999986 7999999999999 9999 998 555 4888999999999998 47899
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeC
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFEN 157 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~ 157 (270)
++|++++|+++++++|++++|+++.+|++|+++++++++.+.++ ++|++.+++.... ++.+.+.+.+++ ++|+++|+
T Consensus 119 ~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~ 196 (303)
T cd08251 119 AKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINT 196 (303)
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEEC
Confidence 99999999999999999999999999999999999999999997 8999888888776 788888888776 89999999
Q ss_pred CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc----ccchHHHHHHHHHHHHCCc
Q 042426 158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF----YHQYPKFLELVMLAIKEGK 233 (270)
Q Consensus 158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~ 233 (270)
+++.....++++++++|+++.+|..+.. ........ .+.+++.+....+... +....+.+.++.+++.+|.
T Consensus 197 ~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 271 (303)
T cd08251 197 LSGEAIQKGLNCLAPGGRYVEIAMTALK----SAPSVDLS-VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGE 271 (303)
T ss_pred CcHHHHHHHHHHhccCcEEEEEeccCCC----ccCccChh-HhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCC
Confidence 9888889999999999999998764321 11112222 2334444443333221 2234567888999999999
Q ss_pred eeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
+.+.....+++++++++++.+.+++..+|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 272 LRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred ccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 98877788999999999999999888888874
No 71
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=5.9e-30 Score=215.00 Aligned_cols=244 Identities=20% Similarity=0.184 Sum_probs=193.3
Q ss_pred cccceEEEEeecCCCC-CCCCCEEEec--------------------ccceeeEeecCCccceeccCCCCCccccccccC
Q 042426 4 LSGYGVSKVLDSTHPN-YKKDDLVWGL--------------------TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILG 62 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~-~~~Gd~V~~~--------------------g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~ 62 (270)
.+++|+|.++|+++++ |++||+|+++ |+|++|++++++. ++++ |++ ++.+.++++
T Consensus 69 ~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~--~s~~~a~~~ 144 (341)
T cd08262 69 HEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEAL-LLRV-PDG--LSMEDAALT 144 (341)
T ss_pred cceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHH-eEEC-CCC--CCHHHhhhh
Confidence 3468999999999997 9999999974 8999999999999 9999 998 555444477
Q ss_pred chhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceeecCCchhHHH
Q 042426 63 MPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDA 141 (270)
Q Consensus 63 ~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 141 (270)
.++++||+++ ..+++++|++|+|+|+ |++|++++|+|+.+|++ ++++++++++.+.++ ++|+++++++++. +..+
T Consensus 145 ~~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~ 220 (341)
T cd08262 145 EPLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SPFA 220 (341)
T ss_pred hhHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CHHH
Confidence 8889999986 7789999999999975 99999999999999996 666677888888887 8999888887654 3222
Q ss_pred ---HHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCccc
Q 042426 142 ---ALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYH 216 (270)
Q Consensus 142 ---~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (270)
.+.+...+ ++|+++|++|+ ..+..++++++++|+++.+|..... . .........+++++.+.....
T Consensus 221 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~----~--~~~~~~~~~~~~~~~~~~~~~--- 291 (341)
T cd08262 221 AWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES----D--NIEPALAIRKELTLQFSLGYT--- 291 (341)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----C--ccCHHHHhhcceEEEEEeccc---
Confidence 23344444 89999999998 4788899999999999999875321 1 122222244666666443222
Q ss_pred chHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 217 QYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 217 ~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.+.+.++.+++.+|.+.+ .+...+++++++++++.+.+++..+|+|++
T Consensus 292 --~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 292 --PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred --HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 457888999999999875 346789999999999999999999999974
No 72
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.97 E-value=1e-29 Score=213.28 Aligned_cols=243 Identities=20% Similarity=0.261 Sum_probs=201.0
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
+++|+|.++|++++.|++||+|++ .|++++|+.++.+. ++++ |++
T Consensus 60 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~-- 135 (338)
T PRK09422 60 EGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADY-AVKV-PEG-- 135 (338)
T ss_pred ccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHH-eEeC-CCC--
Confidence 578889899999999999999985 37899999999999 9999 999
Q ss_pred ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHhCCCcee
Q 042426 54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKL-VGCYVVGSARSKEKVDLLKHKFGFDDAF 131 (270)
Q Consensus 54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~-~g~~v~~~~~~~~~~~~~~~~~g~~~vi 131 (270)
+++ ++++++.+++|||+++ ..+++++|++++|+| +|++|++++++|+. .|++|+++++++++.+.++ ++|++.++
T Consensus 136 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~ 212 (338)
T PRK09422 136 LDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTI 212 (338)
T ss_pred CCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEe
Confidence 555 5889999999999998 678899999999999 59999999999998 4999999999999999997 89998888
Q ss_pred ecCC-chhHHHHHHhHcCCCcc-EEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426 132 NYKE-EPDLDAALNRCFPEGID-IYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF 209 (270)
Q Consensus 132 ~~~~-~~~~~~~i~~~~~~~~d-~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (270)
+++. . ++.+.+.+..+ ++| +++++.++..+..++++++++|+++.+|.... ....+......++..+.++
T Consensus 213 ~~~~~~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~ 284 (338)
T PRK09422 213 NSKRVE-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGS 284 (338)
T ss_pred cccccc-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEe
Confidence 8764 4 66777777665 688 55565666788999999999999999986431 1123444555567777665
Q ss_pred cccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426 210 LAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA 268 (270)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 268 (270)
.... .+.++++.+++++|.+.+.+. .+++++++++++.+.+++..||+++++.
T Consensus 285 ~~~~-----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 285 LVGT-----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred cCCC-----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 4322 467888999999999877654 5799999999999999999999998763
No 73
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.97 E-value=9.8e-30 Score=215.25 Aligned_cols=248 Identities=22% Similarity=0.304 Sum_probs=204.9
Q ss_pred cccceEEEEeecCCCCCCCCCEEEe--------------------------------------------------cccce
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------------------LTSWE 33 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------------------~g~~~ 33 (270)
.+++|+|..+|++++.|++||+|++ .|+|+
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 138 (363)
T cd08279 59 HEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFA 138 (363)
T ss_pred ccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccce
Confidence 3567889999999999999999987 27899
Q ss_pred eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEE
Q 042426 34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGS 111 (270)
Q Consensus 34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~ 111 (270)
+|++++++. ++++ |++ ++. +++.+++++++||.++...+++.++++|+|+| .|++|++++++|+.+|++ |+++
T Consensus 139 ~~~~~~~~~-~~~l-p~~--~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~ 213 (363)
T cd08279 139 EYTVVPEAS-VVKI-DDD--IPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAV 213 (363)
T ss_pred eeEEecccc-EEEC-CCC--CChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEE
Confidence 999999999 9999 998 554 58888999999999988889999999999996 499999999999999995 9999
Q ss_pred eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccC
Q 042426 112 ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEK 189 (270)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 189 (270)
++++++.+.++ ++|++++++++.. ++...+.+..++ ++|+++|++++ ..+..++++++++|+++.+|.... .
T Consensus 214 ~~~~~~~~~~~-~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----~ 287 (363)
T cd08279 214 DPVPEKLELAR-RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP----G 287 (363)
T ss_pred cCCHHHHHHHH-HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC----C
Confidence 98999999887 8999888888876 788888877755 89999999995 578999999999999999976442 1
Q ss_pred CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEE
Q 042426 190 PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQL 264 (270)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~v 264 (270)
....++...+..++.++.+...... ...+.++++.+++.++.+.+ .+.++++++++++|++.+.+++..+.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 288 ETVSLPALELFLSEKRLQGSLYGSA--NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cccccCHHHHhhcCcEEEEEEecCc--CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 1223445555556766666544321 23577899999999999876 3667899999999999999888765554
No 74
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.97 E-value=6.2e-30 Score=213.45 Aligned_cols=248 Identities=19% Similarity=0.295 Sum_probs=195.8
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE 74 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~ 74 (270)
+++|.|.++ +++.|++||+|++. |+|++|+.++++. ++++ |++ +++ +++.+++.+.+||.++..
T Consensus 64 e~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~-~~~l-p~~--~~~~~aa~~~~~~~ta~~~l~~ 137 (325)
T cd05280 64 DAAGTVVSS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADW-VVPL-PEG--LSLREAMILGTAGFTAALSVHR 137 (325)
T ss_pred ccEEEEEEe--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhh-EEEC-CCC--CCHHHHHhhHHHHHHHHHHHHH
Confidence 467777777 56789999999973 7999999999999 9999 998 555 588999999999999866
Q ss_pred hcCC--C-CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426 75 LCSP--K-KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI 151 (270)
Q Consensus 75 ~~~~--~-~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~ 151 (270)
..+. . .+++|+|+|++|++|++++++|+.+|++|+++++++++.+.++ ++|++++++.++. . ....+....+++
T Consensus 138 ~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~ 214 (325)
T cd05280 138 LEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL-L-DESKKPLLKARW 214 (325)
T ss_pred HhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH-H-HHHHHHhcCCCc
Confidence 5433 5 3579999999999999999999999999999999999999997 8999888876542 1 122223333479
Q ss_pred cEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc-cchHHHHHHHHHHHH
Q 042426 152 DIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY-HQYPKFLELVMLAIK 230 (270)
Q Consensus 152 d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 230 (270)
|+++||+|+..+..++++++++|+++.+|..... +. ..+...++.+++++.+....... ....+.++.+.+++.
T Consensus 215 d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (325)
T cd05280 215 AGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGP----EL-TTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWK 289 (325)
T ss_pred cEEEECCchHHHHHHHHhhcCCCEEEEEecCCCC----cc-ccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999875421 11 23344455688888887765432 223356666777777
Q ss_pred CCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 231 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.+ +.+.+..++++++++++++.+.+++..||+|+++
T Consensus 290 ~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 290 PD-LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred cC-CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 77 4445678899999999999999999999999864
No 75
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.97 E-value=4.3e-30 Score=214.53 Aligned_cols=249 Identities=22% Similarity=0.294 Sum_probs=191.8
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE 74 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~ 74 (270)
+++|.|.++ +++.|++||+|++. |+|++|+.+++++ ++++ |++ +++ +++.+++++.|||.++..
T Consensus 64 e~~G~V~~~--~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~--~~~~~a~~~~~~~~ta~~~l~~ 137 (326)
T cd08289 64 DLAGTVVES--NDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEW-VVPL-PKG--LTLKEAMILGTAGFTAALSIHR 137 (326)
T ss_pred ceeEEEEEc--CCCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHH-eEEC-CCC--CCHHHHhhhhhHHHHHHHHHHH
Confidence 455666664 46789999999874 8999999999999 9999 998 555 488889999999988854
Q ss_pred hcC---CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426 75 LCS---PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI 151 (270)
Q Consensus 75 ~~~---~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~ 151 (270)
..+ ..++++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++.++. ..+.+.+...+++
T Consensus 138 ~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~ 214 (326)
T cd08289 138 LEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL--QEESIKPLEKQRW 214 (326)
T ss_pred HHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhH--HHHHHHhhccCCc
Confidence 332 345789999999999999999999999999999999999999997 8999888877653 2445555543489
Q ss_pred cEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHH
Q 042426 152 DIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIK 230 (270)
Q Consensus 152 d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 230 (270)
|+++||+|+..+..++++++++|+++.+|.... .....+...++.+++++.+...... .....+.+..+.+.+.
T Consensus 215 d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (326)
T cd08289 215 AGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGG-----GEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLK 289 (326)
T ss_pred CEEEECCcHHHHHHHHHHhhcCCEEEEEeecCC-----CCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcC
Confidence 999999999889999999999999999987532 1112234556678888888754322 1112334444444443
Q ss_pred CCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 231 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.+.+.+.+..+++++++++|++.+.+++..||+|+++
T Consensus 290 ~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 290 PTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred ccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 3333344578899999999999999999999999864
No 76
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.97 E-value=1.3e-29 Score=212.60 Aligned_cols=243 Identities=22% Similarity=0.309 Sum_probs=205.1
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVPL 54 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~~ 54 (270)
+++|+|..+|+++++|++||+|++ .|+|++|+.++.+. ++++ |++ +
T Consensus 63 ~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~--~ 138 (338)
T cd08254 63 EIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARA-LVPV-PDG--V 138 (338)
T ss_pred cccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHH-eEEC-CCC--C
Confidence 577888889999999999999986 27899999999999 9999 998 5
Q ss_pred cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426 55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY 133 (270)
Q Consensus 55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~ 133 (270)
+. ++++++.+++|||+++....+++++++|||.| +|++|++++++|+.+|++|+++++++++.+.++ ++|.+++++.
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~ 216 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNS 216 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcC
Confidence 55 48889999999999998888899999999976 599999999999999999999999999999997 8999888877
Q ss_pred CCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426 134 KEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA 211 (270)
Q Consensus 134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (270)
.+. .....+ ....+ ++|+++||+|. ..+..++++|+++|+++.+|.... ....+...+..++.++.+...
T Consensus 217 ~~~-~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~ 288 (338)
T cd08254 217 LDD-SPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIARELRIIGSFG 288 (338)
T ss_pred CCc-CHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhhCccEEEEecc
Confidence 765 666666 44444 89999999985 588899999999999999986432 122445566777777777554
Q ss_pred cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.. .+.+..+.++++++.+.+. ...+++++++++++.+.+++..+|+|+++
T Consensus 289 ~~-----~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 289 GT-----PEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred CC-----HHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 32 5678889999999999876 56889999999999999999999999874
No 77
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.97 E-value=8.9e-30 Score=214.08 Aligned_cols=249 Identities=21% Similarity=0.265 Sum_probs=202.9
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
.+++|.|..+|++++.|++||+|+++ |+|++|++++++. ++++ |++
T Consensus 58 ~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-P~~-- 133 (343)
T cd08236 58 HEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARN-LIKI-PDH-- 133 (343)
T ss_pred cceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHH-eEEC-cCC--
Confidence 35778888899999999999999873 7999999999999 9999 998
Q ss_pred cccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCcee
Q 042426 54 LPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAF 131 (270)
Q Consensus 54 ~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi 131 (270)
++.+ +|++ ..+++||+++. ..+++++++|+|+| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++
T Consensus 134 ~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~ 209 (343)
T cd08236 134 VDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTI 209 (343)
T ss_pred CCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEe
Confidence 5553 5555 67889999985 78899999999997 599999999999999997 999999999999887 89998888
Q ss_pred ecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426 132 NYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF 209 (270)
Q Consensus 132 ~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (270)
++++. . .+.+.+..++ ++|+++||.|. ..+..++++|+++|+++.+|..... ..........++.+++++.++
T Consensus 210 ~~~~~-~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~ 284 (343)
T cd08236 210 NPKEE-D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGS 284 (343)
T ss_pred cCccc-c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEE
Confidence 88876 6 7777777766 79999999976 5788999999999999999864321 111122344556778888887
Q ss_pred cccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhc-CCccceEEE
Q 042426 210 LAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFT-GQNVGKQLV 265 (270)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vv 265 (270)
..........+.++++.++++++.+. +.+...+++++++++++.+++ +...+|+|+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 285 WNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred eeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 76443223456788899999999985 445678899999999999998 667788874
No 78
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=1.6e-29 Score=209.79 Aligned_cols=246 Identities=18% Similarity=0.167 Sum_probs=201.3
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec--ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGE 82 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~ 82 (270)
+++|+|.++|++++++++||+|+++ |+|++|+.++++. ++++ |++ +. .++.+..+++++++++. .+++++++
T Consensus 58 e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~-~~~l-P~~--~~-~~~~~~~~~~~a~~~~~-~~~~~~~~ 131 (312)
T cd08269 58 EGWGRVVALGPGVRGLAVGDRVAGLSGGAFAEYDLADADH-AVPL-PSL--LD-GQAFPGEPLGCALNVFR-RGWIRAGK 131 (312)
T ss_pred eeEEEEEEECCCCcCCCCCCEEEEecCCcceeeEEEchhh-eEEC-CCc--hh-hhHHhhhhHHHHHHHHH-hcCCCCCC
Confidence 5678888899999999999999986 8999999999999 9999 988 42 23322378889999985 78899999
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCc
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG 160 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~ 160 (270)
+++|+| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++++++.+.. ++.+.+.+.+++ ++|+++||.|+
T Consensus 132 ~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~ 208 (312)
T cd08269 132 TVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGH 208 (312)
T ss_pred EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCC
Confidence 999997 599999999999999998 999998988888877 8999888887666 788888887776 89999999986
Q ss_pred -chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--e
Q 042426 161 -KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--V 237 (270)
Q Consensus 161 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~ 237 (270)
.....++++++++|+++.+|.... ....++...+..++..+.++.... +....+.++++.++++++.+.+ .
T Consensus 209 ~~~~~~~~~~l~~~g~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 282 (312)
T cd08269 209 QWPLDLAGELVAERGRLVIFGYHQD-----GPRPVPFQTWNWKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSL 282 (312)
T ss_pred HHHHHHHHHHhccCCEEEEEccCCC-----CCcccCHHHHhhcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhh
Confidence 478899999999999999986541 122334445666777776654332 2234578899999999999987 3
Q ss_pred eeeecCcccHHHHHHHHhcCCc-cceEEE
Q 042426 238 EDIAEGLEKAPSALVGIFTGQN-VGKQLV 265 (270)
Q Consensus 238 ~~~~~~~~~~~~a~~~~~~~~~-~gk~vv 265 (270)
+.+.+++++++++++.+.+++. .+|+++
T Consensus 283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 283 LTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 5578999999999999999864 578876
No 79
>PRK10083 putative oxidoreductase; Provisional
Probab=99.97 E-value=9.6e-30 Score=213.55 Aligned_cols=243 Identities=16% Similarity=0.174 Sum_probs=194.8
Q ss_pred ccceEEEEeecCCCCCCCCCEEE---------------------------ec---ccceeeEeecCCccceeccCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVW---------------------------GL---TSWEEFSLIQSPQLLIKILDTSVPL 54 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~---------------------------~~---g~~~~~~~v~~~~~~~~~~p~~~~~ 54 (270)
+++|+|..+|++|+.|++||+|+ ++ |+|++|+.++.++ ++++ |++ +
T Consensus 60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~--~ 135 (339)
T PRK10083 60 EFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKN-AHRI-PDA--I 135 (339)
T ss_pred ceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHH-eEEC-cCC--C
Confidence 46788888999999999999998 33 7899999999999 9999 998 5
Q ss_pred cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHH-cCCE-EEEEeCCHHHHHHHHHHhCCCceee
Q 042426 55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKL-VGCY-VVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~-~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
+.+.+++..++.++|.++ ..+++++|++|+|+| +|++|++++|+|+. +|++ ++++++++++.+.++ ++|++++++
T Consensus 136 ~~~~a~~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~ 212 (339)
T PRK10083 136 ADQYAVMVEPFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVIN 212 (339)
T ss_pred CHHHHhhhchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEec
Confidence 554345677888888654 678899999999999 59999999999996 6995 777778888999888 899998998
Q ss_pred cCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426 133 YKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL 210 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (270)
+++. ++.+.+.. .+ ++|++||++|+ ..+..++++++++|+++.+|.... ....+...+..+++++.+..
T Consensus 213 ~~~~-~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~ 283 (339)
T PRK10083 213 NAQE-PLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE------PSEIVQQGITGKELSIFSSR 283 (339)
T ss_pred Cccc-cHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CceecHHHHhhcceEEEEEe
Confidence 8775 67666643 23 57899999995 578999999999999999987532 11223444445666666544
Q ss_pred ccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCC-ccceEEEEecC
Q 042426 211 AGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQ-NVGKQLVAVAR 269 (270)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~ 269 (270)
. ..+.++++.+++.+|.+.+ .+..+|+++++++|++.+.++. ..+|+++++.+
T Consensus 284 ~------~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 284 L------NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred c------ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 3 1466889999999999987 3678899999999999998654 56899998764
No 80
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=9.6e-30 Score=213.84 Aligned_cols=241 Identities=18% Similarity=0.184 Sum_probs=197.2
Q ss_pred cccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSV 52 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~ 52 (270)
.+++|+|.++|+++++|++||+|++ .|+|++|++++++. ++++ |++
T Consensus 60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~- 136 (343)
T cd05285 60 HESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADF-CHKL-PDN- 136 (343)
T ss_pred cceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHH-cEEC-cCC-
Confidence 3678889999999999999999985 37899999999999 9999 999
Q ss_pred Ccccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCce
Q 042426 53 PLPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDA 130 (270)
Q Consensus 53 ~~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v 130 (270)
++.+ ++.+ .++.+||+++ ..+++++|++++|+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|++++
T Consensus 137 -~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~v 211 (343)
T cd05285 137 -VSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHT 211 (343)
T ss_pred -CCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEE
Confidence 5553 5544 6788999987 7899999999999875 99999999999999997 899988899999997 8899989
Q ss_pred eecCCchhH---HHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcce
Q 042426 131 FNYKEEPDL---DAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRIC 205 (270)
Q Consensus 131 i~~~~~~~~---~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (270)
+++++. ++ .+.+.+.+++ ++|++|||.|+. .+..++++++++|+++.+|.... . ...+......+++.
T Consensus 212 i~~~~~-~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~ 284 (343)
T cd05285 212 VNVRTE-DTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP-----E-VTLPLSAASLREID 284 (343)
T ss_pred eccccc-cchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-----C-CccCHHHHhhCCcE
Confidence 888765 53 6777777766 899999999985 88999999999999999986432 1 12333455566666
Q ss_pred eeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCC-ccceEEE
Q 042426 206 MEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQ-NVGKQLV 265 (270)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv 265 (270)
+.+.... .+.++++.+++.++.+. +.+.+++++++++++++.+.+++ ..+|++|
T Consensus 285 ~~~~~~~------~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 285 IRGVFRY------ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EEEeccC------hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 6665432 25678899999999865 34567899999999999999875 5689988
No 81
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.97 E-value=6.2e-30 Score=214.59 Aligned_cols=244 Identities=20% Similarity=0.203 Sum_probs=199.9
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec-----------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHh
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL-----------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGL 72 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l 72 (270)
+++|.|..+|++++.|++||+|+++ |+|++|++++.+. ++++ |++ ++. +++.+++++.|||+++
T Consensus 61 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~~~~~~~~~~ta~~~l 136 (339)
T cd08249 61 DFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADL-TAKI-PDN--ISFEEAATLPVGLVTAALAL 136 (339)
T ss_pred eeeEEEEEeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhh-eEEC-CCC--CCHHHceecchHHHHHHHHH
Confidence 5678888899999999999999986 7999999999999 9999 988 555 4888899999999998
Q ss_pred hhhcCC----------CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHH
Q 042426 73 HELCSP----------KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAA 142 (270)
Q Consensus 73 ~~~~~~----------~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~ 142 (270)
.+..++ .++++++|+|++|++|++++++++.+|++|++++ ++++.+.++ ++|+++++++++. ++.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~~-~~~~~ 213 (339)
T cd08249 137 FQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHDP-DVVED 213 (339)
T ss_pred hccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCCc-hHHHH
Confidence 766655 7899999999999999999999999999999988 568888887 8999989988876 78888
Q ss_pred HHhHcCCCccEEEeCCCc-chHHHHHHcccc--CCEEEEEcccccccccCCCCccchHHHHhhcceeeecccc-------
Q 042426 143 LNRCFPEGIDIYFENVGG-KMLDAVLLNMRI--CGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG------- 212 (270)
Q Consensus 143 i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 212 (270)
+.+.+++++|+++|++|+ ..+..+++++++ +|+++.+|...... .+..+.++......
T Consensus 214 l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 281 (339)
T cd08249 214 IRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVLGYTVFGEIP 281 (339)
T ss_pred HHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEEeeeeccccc
Confidence 877766689999999998 789999999999 99999998754211 01112222221111
Q ss_pred CcccchHHHHHHHHHHHHCCceeeeeeeecC--cccHHHHHHHHhcCC-ccceEEEEe
Q 042426 213 DFYHQYPKFLELVMLAIKEGKLVYVEDIAEG--LEKAPSALVGIFTGQ-NVGKQLVAV 267 (270)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~a~~~~~~~~-~~gk~vv~~ 267 (270)
..+......++++.+++.++.+.+.....++ ++++++|++.+.+++ ..+|+|+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 282 EDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred ccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 1122334678889999999999987666777 999999999999998 899999874
No 82
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.97 E-value=2.4e-29 Score=211.63 Aligned_cols=244 Identities=20% Similarity=0.157 Sum_probs=202.3
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCC--ccceeccCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSP--QLLIKILDTS 51 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~--~~~~~~~p~~ 51 (270)
+++|+|.++|++++++++||+|++. |++++|+.++++ . ++++ |++
T Consensus 61 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-p~~ 138 (345)
T cd08286 61 EGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNS-LYKL-PEG 138 (345)
T ss_pred cceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCc-eEEC-CCC
Confidence 5778888899999999999999863 788999999987 7 9999 988
Q ss_pred CCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCc
Q 042426 52 VPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDD 129 (270)
Q Consensus 52 ~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~ 129 (270)
++. +++.++..+++||.++....++++|++++|+|+ |++|++++|+++.+| .+|+++.+++++.+.++ ++|++.
T Consensus 139 --~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~ 214 (345)
T cd08286 139 --VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATH 214 (345)
T ss_pred --CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCc
Confidence 554 488899999999998777788999999999875 999999999999999 69999888888888888 899998
Q ss_pred eeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceee
Q 042426 130 AFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICME 207 (270)
Q Consensus 130 vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (270)
++++++. ++.+.+.+..++ ++|++|||+|. ..+..+++.++++|+++.+|.... ....+...++.+++++.
T Consensus 215 ~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~ 287 (345)
T cd08286 215 TVNSAKG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITIT 287 (345)
T ss_pred eeccccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEEE
Confidence 9988876 777778777766 89999999986 477888899999999999986431 12345566677888887
Q ss_pred eccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCC--ccceEEEEe
Q 042426 208 GFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQ--NVGKQLVAV 267 (270)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~--~~gk~vv~~ 267 (270)
+.... .+.++++.++++++.+.+. +..++++++++++++.+.... ...|++|++
T Consensus 288 ~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 288 TGLVD------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred eecCc------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 65332 2467888899999998753 568899999999999998754 345999864
No 83
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.97 E-value=2.1e-29 Score=211.96 Aligned_cols=243 Identities=19% Similarity=0.191 Sum_probs=200.7
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec----------------------------------ccceeeEeecCC--ccceec
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL----------------------------------TSWEEFSLIQSP--QLLIKI 47 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~----------------------------------g~~~~~~~v~~~--~~~~~~ 47 (270)
.+++|+|.++|++++++++||+|++. |+|++|++++++ . ++++
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~~ 137 (344)
T cd08284 59 HEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGT-LLKL 137 (344)
T ss_pred cceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCc-eEEC
Confidence 35789999999999999999999872 789999999965 7 9999
Q ss_pred cCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh
Q 042426 48 LDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKF 125 (270)
Q Consensus 48 ~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~ 125 (270)
|++ +++ ++++++.+++|||+++. ..++.+|++|+|+| +|++|++++++|+.+|+ +|+++++++++.+.++ ++
T Consensus 138 -p~~--l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~ 211 (344)
T cd08284 138 -PDG--LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-AL 211 (344)
T ss_pred -CCC--CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hh
Confidence 998 555 48889999999999995 48899999999997 59999999999999997 8999988888888887 89
Q ss_pred CCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhc
Q 042426 126 GFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR 203 (270)
Q Consensus 126 g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 203 (270)
|+. .++.+.. ++...+.+.+++ ++|++|||+++ ..+..++++++++|+++.+|.... ..........+.++
T Consensus 212 g~~-~~~~~~~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~ 284 (344)
T cd08284 212 GAE-PINFEDA-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTA-----EEFPFPGLDAYNKN 284 (344)
T ss_pred CCe-EEecCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCC-----CCccccHHHHhhcC
Confidence 975 4666665 777888887776 89999999996 588899999999999999987542 11223345567778
Q ss_pred ceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 204 ICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+++.+... ...+.++++.+++.++.+.+ .+..++++++++++++.+.+++. +|+|++
T Consensus 285 ~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 285 LTLRFGRC-----PVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred cEEEEecC-----CcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 87764421 23577889999999999876 35678899999999999998877 999974
No 84
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.97 E-value=2.1e-29 Score=210.10 Aligned_cols=247 Identities=22% Similarity=0.305 Sum_probs=195.9
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE 74 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~ 74 (270)
+++|+|.. +++..|++||+|+++ |++++|+.++++. ++++ |++ ++. +++.++..+.+||.++..
T Consensus 63 e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-P~~--~~~~~aa~~~~~~~ta~~~~~~ 136 (323)
T TIGR02823 63 DAAGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADW-LVPL-PEG--LSLREAMALGTAGFTAALSVMA 136 (323)
T ss_pred eeEEEEEe--cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhh-eEEC-CCC--CCHHHhhhhhhhHHHHHHHHHH
Confidence 34555554 567789999999874 7999999999999 9999 998 555 488889999999988754
Q ss_pred h--cCCCCCc-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426 75 L--CSPKKGE-YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI 151 (270)
Q Consensus 75 ~--~~~~~g~-~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~ 151 (270)
. +.+.+++ +++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++++++.++. +. .+.....+++
T Consensus 137 ~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~ 212 (323)
T TIGR02823 137 LERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-SP--PGKPLEKERW 212 (323)
T ss_pred hhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-HH--HHHHhcCCCc
Confidence 4 3478898 9999999999999999999999999999998888889997 8999888876553 32 4444444469
Q ss_pred cEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc-cchHHHHHHHHHHHH
Q 042426 152 DIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY-HQYPKFLELVMLAIK 230 (270)
Q Consensus 152 d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 230 (270)
|+++||+|+..+..++++++++|+++.+|.... .....+...++.+++++.+......+ ....+.+..+.+++.
T Consensus 213 d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (323)
T TIGR02823 213 AGAVDTVGGHTLANVLAQLKYGGAVAACGLAGG-----PDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLK 287 (323)
T ss_pred eEEEECccHHHHHHHHHHhCCCCEEEEEcccCC-----CCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhh
Confidence 999999999888999999999999999987532 11223334555788888887654321 222345677777888
Q ss_pred CCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 231 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.+.+.+. ...++++++++|++.+.+++..+|+|+++
T Consensus 288 ~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 288 PRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 8888765 45899999999999999999999999864
No 85
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.97 E-value=2.4e-29 Score=212.91 Aligned_cols=247 Identities=19% Similarity=0.271 Sum_probs=199.4
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE 33 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~ 33 (270)
+++|+|.++|++++++++||+|++. |+|+
T Consensus 60 e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a 139 (365)
T cd05279 60 EGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFA 139 (365)
T ss_pred ceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCcccccccccccc
Confidence 5678888899999999999999753 5899
Q ss_pred eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEE
Q 042426 34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGS 111 (270)
Q Consensus 34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~ 111 (270)
+|+.++++. ++++ |++ +++ +++.+++++++||+++.+.+++++|+++||+| +|++|++++++|+.+|++ |+++
T Consensus 140 ~~~~v~~~~-~~~l-P~~--~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~ 214 (365)
T cd05279 140 EYTVVSEIS-LAKI-DPD--APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAV 214 (365)
T ss_pred ceEEecCCc-eEEC-CCC--CCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE
Confidence 999999999 9999 999 555 48888889999999988888999999999997 599999999999999995 7777
Q ss_pred eCCHHHHHHHHHHhCCCceeecCCch-hHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccc-cCCEEEEEccccccccc
Q 042426 112 ARSKEKVDLLKHKFGFDDAFNYKEEP-DLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMR-ICGHIAVCGMISQYNIE 188 (270)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~ 188 (270)
++++++.+.++ ++|++++++.++.+ ++.+.+.+.+++++|+++|++|. ..+..++++++ ++|+++.+|....
T Consensus 215 ~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~---- 289 (365)
T cd05279 215 DINKDKFEKAK-QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS---- 289 (365)
T ss_pred eCCHHHHHHHH-HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----
Confidence 77999999997 99998888776531 45666777665589999999986 68889999999 9999999876431
Q ss_pred CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
.....++...+ .++.++.|.+...+ ...+.+.++.+++.++.+.+ ...++++++++++|++.+.+++.. |+++
T Consensus 290 ~~~~~~~~~~~-~~~~~l~g~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 290 GTEATLDPNDL-LTGRTIKGTVFGGW--KSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred CCceeeCHHHH-hcCCeEEEEeccCC--chHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 11223444454 56677777655433 23567888999999999875 466789999999999999876654 6654
No 86
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.97 E-value=3.1e-29 Score=208.81 Aligned_cols=251 Identities=27% Similarity=0.381 Sum_probs=211.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec--------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhh
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL--------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHEL 75 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~ 75 (270)
+++|+|.++|+++++|++||+|+++ |++++|+.++++. ++++ |++ ++. +++++++++.+||+++...
T Consensus 64 e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~--~~~~~aa~~~~~~~~a~~~l~~~ 139 (325)
T cd08253 64 DGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQ-LVPL-PDG--VSFEQGAALGIPALTAYRALFHR 139 (325)
T ss_pred ceEEEEEeeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHH-cEeC-CCC--CCHHHHhhhhhHHHHHHHHHHHH
Confidence 5678888999999999999999874 7899999999999 9999 988 555 4889999999999999887
Q ss_pred cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEE
Q 042426 76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIY 154 (270)
Q Consensus 76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v 154 (270)
+++.+|++++|+|+++++|++++++++..|++|+++++++++.+.++ ++|++++++.... ++.+.+.+..++ ++|++
T Consensus 140 ~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~v 217 (325)
T cd08253 140 AGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLADRILAATAGQGVDVI 217 (325)
T ss_pred hCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEE
Confidence 89999999999999999999999999999999999999999999997 8999888888776 777778777665 89999
Q ss_pred EeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCc
Q 042426 155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGK 233 (270)
Q Consensus 155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~ 233 (270)
+||+++......+++++++|+++.++.... ........++.++.++.+...... +....+.++++.+++.++.
T Consensus 218 i~~~~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (325)
T cd08253 218 IEVLANVNLAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGA 291 (325)
T ss_pred EECCchHHHHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCC
Confidence 999998888889999999999999887431 112333445667777776654332 2334567788888999999
Q ss_pred eeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
+++.....+++++++++++.+.+++..||+++++
T Consensus 292 i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 292 LRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred ccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 8887778899999999999999988899999863
No 87
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.97 E-value=2.6e-29 Score=210.49 Aligned_cols=242 Identities=24% Similarity=0.304 Sum_probs=200.2
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL 54 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~ 54 (270)
+++|+|.++|++++.+++||+|++. |+|++|+.++.+. ++++ |++ +
T Consensus 61 e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~--~ 136 (334)
T PRK13771 61 EVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTS-LVKV-PPN--V 136 (334)
T ss_pred cceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhc-eEEC-CCC--C
Confidence 5778888999999999999999873 7899999999999 9999 988 4
Q ss_pred cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426 55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY 133 (270)
Q Consensus 55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~ 133 (270)
+. +++.+++.+.+||+++... +++++++++|+|++|++|++++++++.+|++++++++++++.+.++ ++ ++++++.
T Consensus 137 ~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~ 213 (334)
T PRK13771 137 SDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVG 213 (334)
T ss_pred CHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCc
Confidence 44 4888899999999999765 8999999999999999999999999999999999999999999987 77 6666655
Q ss_pred CCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC
Q 042426 134 KEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD 213 (270)
Q Consensus 134 ~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (270)
+ ++.+.+.+. +++|+++||+|+.....++++++++|+++.+|..... ..........+.+++++.+...
T Consensus 214 ~---~~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~-- 282 (334)
T PRK13771 214 S---KFSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHIS-- 282 (334)
T ss_pred h---hHHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecC--
Confidence 4 345555554 3699999999998889999999999999999874421 1101223344567788777632
Q ss_pred cccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 214 FYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
...+.++++.++++++.+++.+...++++++++|++.+.+++..+|++++.
T Consensus 283 ---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 283 ---ATKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred ---CCHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 225778899999999999887778899999999999999988889999864
No 88
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=3.8e-29 Score=209.57 Aligned_cols=246 Identities=25% Similarity=0.339 Sum_probs=211.7
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------------------------ccceeeEeecCCccceeccCCCCCccc-ccc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTG 59 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a 59 (270)
+++|.|.++|+++++|++||+|++. |+|++|+.++++. ++++ |++ ++. +++
T Consensus 64 e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~--~~~~~a~ 139 (336)
T cd08276 64 DGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEG-LVRA-PDH--LSFEEAA 139 (336)
T ss_pred ceeEEEEEeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHH-eEEC-CCC--CCHHHhh
Confidence 5678888899999999999999874 5799999999999 9999 988 555 578
Q ss_pred ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCC-chh
Q 042426 60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKE-EPD 138 (270)
Q Consensus 60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~ 138 (270)
.++.++++||+++...+++++|++++|+| +|++|++++++++..|++|+++++++++.+.++ ++|.+++++.+. . +
T Consensus 140 ~~~~~~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~ 216 (336)
T cd08276 140 TLPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-D 216 (336)
T ss_pred hhhHHHHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-C
Confidence 88999999999998888999999999995 699999999999999999999999999999998 689888888776 5 7
Q ss_pred HHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccc
Q 042426 139 LDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQ 217 (270)
Q Consensus 139 ~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (270)
+.+.+.+.+++ ++|+++|+++...+..++++++++|+++.+|..... ....+....+.+++++.+.....
T Consensus 217 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~---- 287 (336)
T cd08276 217 WGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS---- 287 (336)
T ss_pred HHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc----
Confidence 88888888776 899999999988889999999999999999875431 11244566678899998887654
Q ss_pred hHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 218 YPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 218 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.+.++++.+++.++.+.+.....+++++++++++.+.+++..+|+++++
T Consensus 288 -~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 -RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred -HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 4678889999999988877668899999999999999888889999863
No 89
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=2.2e-29 Score=206.19 Aligned_cols=251 Identities=22% Similarity=0.300 Sum_probs=205.9
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec--ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
.+++|.|.++|++++.|++||+|+++ |+|++|+.++.+. ++++ |++ ++. +++++++++.++|.++.+...+.+
T Consensus 29 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 104 (288)
T smart00829 29 GECAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARL-VVPI-PDG--LSFEEAATVPVVFLTAYYALVDLARLRP 104 (288)
T ss_pred ceeEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHH-eEEC-CCC--CCHHHHHhchHHHHHHHHHHHHHhCCCC
Confidence 35678888899999999999999997 8999999999999 9999 988 554 478889999999999877888999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeecCCchhHHHHHHhHcCC-CccEEEeC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--DDAFNYKEEPDLDAALNRCFPE-GIDIYFEN 157 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~ 157 (270)
|++++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|+ +.++++.+. ++.+.+.+..++ ++|+++|+
T Consensus 105 g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~ 182 (288)
T smart00829 105 GESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIPDDHIFSSRDL-SFADEILRATGGRGVDVVLNS 182 (288)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCChhheeeCCCc-cHHHHHHHHhCCCCcEEEEeC
Confidence 999999999999999999999999999999999999999997 8998 678888776 788888877766 89999999
Q ss_pred CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc---ccchHHHHHHHHHHHHCCce
Q 042426 158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF---YHQYPKFLELVMLAIKEGKL 234 (270)
Q Consensus 158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~ 234 (270)
+++.....++++++++|+++.+|..... .....+... +.+++++.+..+... +....+.+.++.+++.++.+
T Consensus 183 ~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (288)
T smart00829 183 LAGEFLDASLRCLAPGGRFVEIGKRDIR----DNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVL 257 (288)
T ss_pred CCHHHHHHHHHhccCCcEEEEEcCcCCc----cccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCc
Confidence 9988888999999999999999874321 111122222 455666666544321 11234567788899999998
Q ss_pred eeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
.+.....+++++++++++.+..++..+|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 258 RPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred cCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 8766677899999999999999887788764
No 90
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.97 E-value=2.8e-29 Score=210.51 Aligned_cols=238 Identities=20% Similarity=0.199 Sum_probs=199.5
Q ss_pred ccceEEEEeecCCCCCCCCCEEE-e-------------------------------------cccceeeEeecCCcccee
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVW-G-------------------------------------LTSWEEFSLIQSPQLLIK 46 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~-~-------------------------------------~g~~~~~~~v~~~~~~~~ 46 (270)
+++|.|.++|+++++|++||+|+ + .|+|++|++++++. +++
T Consensus 60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~ 138 (337)
T cd05283 60 EIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERF-VFK 138 (337)
T ss_pred ceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhh-eEE
Confidence 56788888999999999999996 2 27899999999999 999
Q ss_pred ccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 042426 47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125 (270)
Q Consensus 47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~ 125 (270)
+ |++ ++. +++.+++.+.+||.++... .+++|++++|.| .|++|++++++++.+|++|+++++++++.+.++ ++
T Consensus 139 l-p~~--~~~~~aa~l~~~~~ta~~~~~~~-~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~ 212 (337)
T cd05283 139 I-PEG--LDSAAAAPLLCAGITVYSPLKRN-GVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KL 212 (337)
T ss_pred C-CCC--CCHHHhhhhhhHHHHHHHHHHhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-Hc
Confidence 9 998 554 4788999999999998654 589999999977 599999999999999999999999999999997 89
Q ss_pred CCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcc
Q 042426 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI 204 (270)
Q Consensus 126 g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 204 (270)
|++++++.++. ++... ..+++|++|||+|.. .+..++++++++|+++.+|..... ...+...++.+++
T Consensus 213 g~~~vi~~~~~-~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~ 281 (337)
T cd05283 213 GADEFIATKDP-EAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRK 281 (337)
T ss_pred CCcEEecCcch-hhhhh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCce
Confidence 99888877654 33322 234799999999987 589999999999999999875421 1345566677899
Q ss_pred eeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
++.+..... .+.++.+.+++.++++.+.+ ..++++++++|++.+.+++..||+|++
T Consensus 282 ~i~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 282 SVAGSLIGG-----RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred EEEEecccC-----HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 998877654 46788899999999998765 678999999999999999999999874
No 91
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.97 E-value=3.2e-29 Score=208.47 Aligned_cols=250 Identities=24% Similarity=0.342 Sum_probs=210.3
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
+++|.|.++|++++.+++||+|+++ |+|++|+.++++. ++++ |++ ++. ++++++.++.++|+++.+.+.+.+
T Consensus 64 e~~G~v~~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~l~~~~~~a~~~~~~~~~~~~ 139 (323)
T cd05276 64 EVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQ-LLPV-PEG--LSLVEAAALPEVFFTAWQNLFQLGGLKA 139 (323)
T ss_pred eeEEEEEeeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHH-hccC-CCC--CCHHHHhhchhHHHHHHHHHHHhcCCCC
Confidence 5678888899999999999999987 8999999999999 9999 988 555 488899999999999888888999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG 159 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g 159 (270)
+++++|+|+++++|++++++++..|++|+++++++++.+.++ ++|.+.+++.... ++.+.+.+...+ ++|+++|+.|
T Consensus 140 ~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g 217 (323)
T cd05276 140 GETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVG 217 (323)
T ss_pred CCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCc
Confidence 999999999999999999999999999999999999999887 8898888887776 777777777665 8999999999
Q ss_pred cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHHHHHCCce
Q 042426 160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVMLAIKEGKL 234 (270)
Q Consensus 160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~ 234 (270)
+..+..++++++++|+++.+|...... ...+...++.+++++.+...... +....+.+.++.+++.++.+
T Consensus 218 ~~~~~~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (323)
T cd05276 218 GDYLARNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRI 292 (323)
T ss_pred hHHHHHHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCc
Confidence 888889999999999999998754321 12344455568888888776543 12233566778889999999
Q ss_pred eeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
.+.....|++++++++++.+.+++..+|+++
T Consensus 293 ~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 293 RPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred cCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 8777788999999999999998888888874
No 92
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.97 E-value=3.6e-29 Score=213.18 Aligned_cols=246 Identities=21% Similarity=0.207 Sum_probs=197.0
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCC-
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVP- 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~- 53 (270)
+++|+|.++|++++.|++||+|++ .|+|++|+.++++. ++++ |++++
T Consensus 94 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~-~~~l-P~~~~~ 171 (384)
T cd08265 94 EFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARY-AWEI-NELREI 171 (384)
T ss_pred ceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHH-eEEC-Cccccc
Confidence 577899999999999999999985 27899999999999 9999 87531
Q ss_pred ----ccccccccCchhhhHHHHhhhh-cCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC
Q 042426 54 ----LPYYTGILGMPGLTAYGGLHEL-CSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF 127 (270)
Q Consensus 54 ----~~~~~a~l~~~~~ta~~~l~~~-~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~ 127 (270)
++.++++++.++++||+++... +++++|++|+|+| +|++|++++++|+.+|+ +|+++++++++.+.++ ++|+
T Consensus 172 ~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~ 249 (384)
T cd08265 172 YSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGA 249 (384)
T ss_pred cccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCC
Confidence 3435778888999999998666 7899999999996 59999999999999999 7999998888888888 8999
Q ss_pred CceeecCCc--hhHHHHHHhHcCC-CccEEEeCCCcc--hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhh
Q 042426 128 DDAFNYKEE--PDLDAALNRCFPE-GIDIYFENVGGK--MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGK 202 (270)
Q Consensus 128 ~~vi~~~~~--~~~~~~i~~~~~~-~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (270)
++++++++. .++...+.+.+++ ++|+++||.|+. .+..++++++++|+++.+|.... ....+......+
T Consensus 250 ~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~ 323 (384)
T cd08265 250 DYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------TVPLHLEVLQVR 323 (384)
T ss_pred CEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------CCcccHHHHhhC
Confidence 888877631 1567778888777 899999999963 77899999999999999986432 112233444455
Q ss_pred cceeeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 203 RICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
..++.+..... ....+.++.+++.++.+.+. +...|+++++++|++.+.++ ..+|+|+
T Consensus 324 ~~~l~~~~~~~----~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 324 RAQIVGAQGHS----GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred ceEEEEeeccC----CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 66666654322 13468889999999999863 55789999999999997665 5788875
No 93
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.97 E-value=5.4e-29 Score=208.31 Aligned_cols=242 Identities=23% Similarity=0.292 Sum_probs=199.0
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
.+++|.|.++|++++.|++||+|+++ |+|++|++++.+. ++++ |++
T Consensus 60 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~-- 135 (332)
T cd08259 60 HEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERS-LVKL-PDN-- 135 (332)
T ss_pred ccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhh-eEEC-CCC--
Confidence 35778888999999999999999874 6899999999999 9999 998
Q ss_pred ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426 54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
++. +++.+++++.+||+++.. +++.++++++|+|++|++|++++++++..|++|+++++++++.+.++ +++.+++++
T Consensus 136 ~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~ 213 (332)
T cd08259 136 VSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVID 213 (332)
T ss_pred CCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEe
Confidence 554 488889999999999976 88999999999999999999999999999999999999988888887 888876665
Q ss_pred cCCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecccc
Q 042426 133 YKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG 212 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (270)
.. ++.+.+.+.. ++|+++||+|......++++++++|+++.++..... ....+......++..+.+...
T Consensus 214 ~~---~~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~- 282 (332)
T cd08259 214 GS---KFSEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPD-----PAPLRPGLLILKEIRIIGSIS- 282 (332)
T ss_pred cH---HHHHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCC-----CcCCCHHHHHhCCcEEEEecC-
Confidence 43 2445555443 599999999988889999999999999999875421 111222333345666665532
Q ss_pred CcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 213 DFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
...+.++++.+++.+|.+.+.+..++++++++++++.+.+++..||++++
T Consensus 283 ----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 283 ----ATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred ----CCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 23567888999999999988877889999999999999998888999874
No 94
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.97 E-value=3.7e-29 Score=210.85 Aligned_cols=242 Identities=19% Similarity=0.179 Sum_probs=195.9
Q ss_pred cccceEEEEeecCCC--CCCCCCEEEe---------------------------c-----ccceeeEeecCCccceeccC
Q 042426 4 LSGYGVSKVLDSTHP--NYKKDDLVWG---------------------------L-----TSWEEFSLIQSPQLLIKILD 49 (270)
Q Consensus 4 i~g~g~v~~vG~~v~--~~~~Gd~V~~---------------------------~-----g~~~~~~~v~~~~~~~~~~p 49 (270)
.+++|+|.++|++++ +|++||+|++ + |+|++|+.+++++.++++ |
T Consensus 68 ~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~l-P 146 (350)
T cd08256 68 HEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKV-P 146 (350)
T ss_pred cceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEEC-C
Confidence 357888999999999 9999999986 2 899999999988427899 9
Q ss_pred CCCCcccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCC
Q 042426 50 TSVPLPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGF 127 (270)
Q Consensus 50 ~~~~~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~ 127 (270)
++ ++.+ ++.+ .+++|+|+++ +.+++++|++|+|.| +|++|++++++|+.+|++ ++++++++++.+.++ ++|+
T Consensus 147 ~~--~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~ 220 (350)
T cd08256 147 DD--IPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGA 220 (350)
T ss_pred CC--CCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCC
Confidence 88 5554 5666 8899999998 778999999999954 599999999999999984 677777888888887 8999
Q ss_pred CceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHH-Hhhcc
Q 042426 128 DDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQV-VGKRI 204 (270)
Q Consensus 128 ~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~ 204 (270)
+++++++.. ++.+.+.+.+++ ++|++||++|+ ..+..++++++++|+++.+|.... . ...+...+ ..++.
T Consensus 221 ~~v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~ 293 (350)
T cd08256 221 DVVLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD-----P-VTVDWSIIGDRKEL 293 (350)
T ss_pred cEEecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC-----C-CccChhHhhccccc
Confidence 888888766 788888887776 89999999995 578889999999999999986431 1 11222222 24566
Q ss_pred eeeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
++.++.... ..+.++.+++.+|.+.+. +..+++++++++|++.+.+++..+|+++
T Consensus 294 ~i~~~~~~~------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 294 DVLGSHLGP------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEEEeccCc------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 666665432 357889999999999873 5688999999999999999888889874
No 95
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.97 E-value=4.7e-29 Score=209.73 Aligned_cols=244 Identities=19% Similarity=0.200 Sum_probs=198.7
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCc----cceeccCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQ----LLIKILDT 50 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~----~~~~~~p~ 50 (270)
+++|+|.++|++++.|++||+|+++ |+|++|+.++++. .++++ |+
T Consensus 60 ~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~l-P~ 138 (343)
T cd08235 60 EIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKL-PD 138 (343)
T ss_pred ceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEEC-CC
Confidence 5778899999999999999999973 8899999998642 27899 99
Q ss_pred CCCcccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCC
Q 042426 51 SVPLPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFD 128 (270)
Q Consensus 51 ~~~~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~ 128 (270)
+ ++.+ ++. ..++.+||+++.. .++++|++|+|+| +|++|++++|+|+..|++ |+++++++++.+.++ ++|.+
T Consensus 139 ~--~~~~~aa~-~~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~ 212 (343)
T cd08235 139 N--VSFEEAAL-VEPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGAD 212 (343)
T ss_pred C--CCHHHHHh-hhHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCc
Confidence 8 5654 444 4788999999954 5899999999997 599999999999999998 999998999999987 89998
Q ss_pred ceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhccee
Q 042426 129 DAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICM 206 (270)
Q Consensus 129 ~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (270)
+++++++. ++.+.+.+..++ ++|+++||+++. .+..++++++++|+++.++..... .....+......+++.+
T Consensus 213 ~~~~~~~~-~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~l 287 (343)
T cd08235 213 YTIDAAEE-DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKG----STVNIDPNLIHYREITI 287 (343)
T ss_pred EEecCCcc-CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCC----CCcccCHHHHhhCceEE
Confidence 88888887 888888887776 899999999964 888999999999999998764321 11223344555566766
Q ss_pred eeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 207 EGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.+..... .+.++++.+++.++.+.+ .+..++++++++++++.+.+++ .+|+|+.
T Consensus 288 ~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 288 TGSYAAS-----PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred EEEecCC-----hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 6554322 466888999999999863 4557889999999999999998 9999873
No 96
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.97 E-value=7.7e-29 Score=208.00 Aligned_cols=247 Identities=25% Similarity=0.348 Sum_probs=209.2
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL 54 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~ 54 (270)
+++|.|.++|++++.|++||+|++. |++++|+.++++. ++++ |++ +
T Consensus 64 e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~-~~~~-p~~--~ 139 (342)
T cd08266 64 DGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARN-LLPI-PDN--L 139 (342)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHH-ceeC-CCC--C
Confidence 5678888899999999999999874 6799999999999 9999 988 5
Q ss_pred cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426 55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY 133 (270)
Q Consensus 55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~ 133 (270)
+. +++.++.++.+||+++.+..++.++++++|+|+++++|++++++++..|++|+++++++++.+.++ .++.+.+++.
T Consensus 140 ~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~ 218 (342)
T cd08266 140 SFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDY 218 (342)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEec
Confidence 54 478888899999999888889999999999999999999999999999999999999999988887 7887777777
Q ss_pred CCchhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecccc
Q 042426 134 KEEPDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG 212 (270)
Q Consensus 134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (270)
.+. ++.+.+.+.+.+ ++|+++|++|...+...+++++++|+++.++..... ....+....+.+++++.+....
T Consensus 219 ~~~-~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
T cd08266 219 RKE-DFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMG 292 (342)
T ss_pred CCh-HHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecC
Confidence 665 677777776665 899999999998889999999999999999875431 1223444556778888777654
Q ss_pred CcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 213 DFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
. ...+.++.+++.++.+.+.+...|++++++++++.+.+++..+|++++.
T Consensus 293 ~-----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 293 T-----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred C-----HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 3 4578889999999999887778899999999999999888889999863
No 97
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=2.9e-29 Score=205.77 Aligned_cols=250 Identities=22% Similarity=0.315 Sum_probs=206.2
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec--ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKG 81 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g 81 (270)
+++|+|.++|+++++|++||+|+++ |+|++|+.++.+. ++++ |++ ++. +++.+++++.++|.++.+...+++|
T Consensus 34 e~~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~g 109 (293)
T cd05195 34 ECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARL-VVKI-PDS--LSFEEAATLPVAYLTAYYALVDLARLQKG 109 (293)
T ss_pred eeeEEEEeecCCccCCCCCCEEEEEecCcccceEEechhh-eEeC-CCC--CCHHHHhhchHHHHHHHHHHHHHhccCCC
Confidence 5678888899999999999999998 8999999999999 9999 988 554 4788889999999999888899999
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CCceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG--FDDAFNYKEEPDLDAALNRCFPE-GIDIYFENV 158 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g--~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~ 158 (270)
++++|+|++|++|++++++++.+|++++++++++++.+.++ +.+ ++.+++.... ++.+.+.+.+++ ++|+++||+
T Consensus 110 ~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~ 187 (293)
T cd05195 110 ESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELGGPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSL 187 (293)
T ss_pred CEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhCCCcceEeecCch-hHHHHHHHHhCCCCceEEEeCC
Confidence 99999999999999999999999999999999989999988 777 6777887766 788888888766 899999999
Q ss_pred CcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc----ccchHHHHHHHHHHHHCCce
Q 042426 159 GGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF----YHQYPKFLELVMLAIKEGKL 234 (270)
Q Consensus 159 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~ 234 (270)
|+..+..++++++++|+++.+|...... ..... ...+.+++++....+... +....+.+.++.+++.++.+
T Consensus 188 ~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (293)
T cd05195 188 SGELLRASWRCLAPFGRFVEIGKRDILS----NSKLG-MRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVL 262 (293)
T ss_pred CchHHHHHHHhcccCceEEEeecccccc----CCccc-hhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCc
Confidence 9989999999999999999988754211 01111 122445566655544332 22234578889999999999
Q ss_pred eeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
.+.....+++++++++++.+.+++..+|+++
T Consensus 263 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 263 KPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred ccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 8877778899999999999999888888874
No 98
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=8.1e-29 Score=206.38 Aligned_cols=252 Identities=23% Similarity=0.293 Sum_probs=212.4
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
+++|.|..+|+++.+|++||+|+++ |++++|+.++.+. ++++ |++ ++. ++++++.+++++|+++.+.+++++
T Consensus 64 e~~G~v~~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~--~~~~~~~~~~~~~~ta~~~~~~~~~~~~ 139 (325)
T TIGR02824 64 EVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQ-VLPV-PEG--LSLVEAAALPETFFTVWSNLFQRGGLKA 139 (325)
T ss_pred eeEEEEEEeCCCCCCCCCCCEEEEccCCCcceeEEEecHHH-cEeC-CCC--CCHHHHHhhhHHHHHHHHHHHHhcCCCC
Confidence 4678888899999999999999986 7999999999999 9999 988 554 478899999999999878899999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG 159 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g 159 (270)
+++++|+|+++++|++++++++..|++|+++++++++.+.++ ++|.+.+++.... ++...+.+..++ ++|+++||+|
T Consensus 140 ~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~ 217 (325)
T TIGR02824 140 GETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVG 217 (325)
T ss_pred CCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCc
Confidence 999999999999999999999999999999999999888886 8998777777665 777778877765 8999999999
Q ss_pred cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHHHHHCCce
Q 042426 160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVMLAIKEGKL 234 (270)
Q Consensus 160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~ 234 (270)
+.....++++++++|+++.+|..... .. ..+...++.+++++.+...... +......+.++.+++.++.+
T Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 292 (325)
T TIGR02824 218 GSYLNRNIKALALDGRIVQIGFQGGR----KA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRV 292 (325)
T ss_pred hHHHHHHHHhhccCcEEEEEecCCCC----cC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcc
Confidence 88888999999999999999875421 11 3445555588999988876542 11234566778889999998
Q ss_pred eeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.+.....+++++++++++.+.+++..+|+++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 293 RPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred cCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 877777899999999999999888889999864
No 99
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1e-28 Score=205.99 Aligned_cols=252 Identities=25% Similarity=0.364 Sum_probs=212.2
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec--------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL--------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE 74 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~ 74 (270)
.+++|+|..+|+++.+|++||+|+++ |++++|+.++++. ++++ |++ ++. ++++++.++.++|.++..
T Consensus 63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~~~~ 138 (328)
T cd08268 63 YEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAA-VVKL-PDG--LSFVEAAALWMQYLTAYGALVE 138 (328)
T ss_pred cceEEEEEeeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHh-cEeC-CCC--CCHHHHHHhhhHHHHHHHHHHH
Confidence 35778898999999999999999876 7899999999999 9999 988 555 478899999999999988
Q ss_pred hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccE
Q 042426 75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDI 153 (270)
Q Consensus 75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~ 153 (270)
...+.++++++|+|+++++|++++++++..|++++++++++++.+.++ ++|.+.+++.... ++.+.+.+...+ ++|+
T Consensus 139 ~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~ 216 (328)
T cd08268 139 LAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDV 216 (328)
T ss_pred hcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHhCCCCceE
Confidence 888999999999999999999999999999999999999999999997 8898888887766 777777777666 8999
Q ss_pred EEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc---ccchHHHHHHHHHHHH
Q 042426 154 YFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF---YHQYPKFLELVMLAIK 230 (270)
Q Consensus 154 v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 230 (270)
+++++++.....++++++++|+++.+|.... .....+....+.+++++.+...... +......++.+.+++.
T Consensus 217 vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (328)
T cd08268 217 VFDPVGGPQFAKLADALAPGGTLVVYGALSG-----EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLA 291 (328)
T ss_pred EEECCchHhHHHHHHhhccCCEEEEEEeCCC-----CCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 9999999888999999999999999886442 1122334445788888887765432 2344556777788888
Q ss_pred CCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 231 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
++.+.+.....+++++++++++.+.+++..+|++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 292 SGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred CCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 998887766788999999999999988888899886
No 100
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.97 E-value=1.4e-28 Score=209.01 Aligned_cols=251 Identities=20% Similarity=0.161 Sum_probs=198.8
Q ss_pred cccceEEEEeecCCCCCCCCCEEEe----------------------------------------cccceeeEeecCC--
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWG----------------------------------------LTSWEEFSLIQSP-- 41 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~-- 41 (270)
.+++|+|.++|++++.+++||+|++ .|+|++|++++.+
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~ 138 (375)
T cd08282 59 HEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADF 138 (375)
T ss_pred cccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccC
Confidence 3577888889999999999999975 1679999999975
Q ss_pred ccceeccCCCCCccc--cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 042426 42 QLLIKILDTSVPLPY--YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKV 118 (270)
Q Consensus 42 ~~~~~~~p~~~~~~~--~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~ 118 (270)
. ++++ |++++... .+++++.+++|||+++ ..+++++|++|+|.|+ |++|++++|+++.+|+ +|+++++++++.
T Consensus 139 ~-~~~l-P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~ 214 (375)
T cd08282 139 N-LLKL-PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERL 214 (375)
T ss_pred c-EEEC-CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 7 9999 99844332 3678888999999999 7789999999999765 9999999999999998 899988899999
Q ss_pred HHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc------------hHHHHHHccccCCEEEEEccccccc
Q 042426 119 DLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK------------MLDAVLLNMRICGHIAVCGMISQYN 186 (270)
Q Consensus 119 ~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~ 186 (270)
+.++ ++|++ .+++++. ++.+.+.+.+++++|+++||+|+. .+..++++++++|+++.+|......
T Consensus 215 ~~~~-~~g~~-~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~ 291 (375)
T cd08282 215 DLAE-SIGAI-PIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAED 291 (375)
T ss_pred HHHH-HcCCe-EeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcc
Confidence 9888 89984 5677765 777777776656799999999976 3789999999999998887643211
Q ss_pred ccC-------CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcC
Q 042426 187 IEK-------PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTG 257 (270)
Q Consensus 187 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~ 257 (270)
... ....++...++.++..+.+... ...+.++++.+++.++.+.+. +..++++++++++++.+.++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~ 366 (375)
T cd08282 292 PGAGDAAAKQGELSFDFGLLWAKGLSFGTGQA-----PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKR 366 (375)
T ss_pred cccccccccCccccccHHHHHhcCcEEEEecC-----CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcC
Confidence 100 0122344455556665554322 124678889999999999873 67899999999999999998
Q ss_pred CccceEEEEe
Q 042426 258 QNVGKQLVAV 267 (270)
Q Consensus 258 ~~~gk~vv~~ 267 (270)
+ .+|+|+++
T Consensus 367 ~-~~kvvv~~ 375 (375)
T cd08282 367 L-ETKVVIKP 375 (375)
T ss_pred C-ceEEEeCC
Confidence 8 88999853
No 101
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.97 E-value=1.3e-28 Score=208.71 Aligned_cols=250 Identities=18% Similarity=0.215 Sum_probs=196.1
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccc
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSW 32 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (270)
.+++|+|.++|++++.|++||+|+.. |+|
T Consensus 66 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 145 (373)
T cd08299 66 HEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTF 145 (373)
T ss_pred ccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcc
Confidence 35778888899999999999999753 689
Q ss_pred eeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEE
Q 042426 33 EEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVG 110 (270)
Q Consensus 33 ~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~ 110 (270)
+||++++++. ++++ |++ +++ +++++++++++||+++...+++++|++++|+|+ |++|++++++++.+|+ +|++
T Consensus 146 ~e~~~v~~~~-~~~l-P~~--l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~ 220 (373)
T cd08299 146 SEYTVVDEIA-VAKI-DAA--APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIA 220 (373)
T ss_pred cceEEecccc-eeeC-CCC--CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE
Confidence 9999999999 9999 998 555 488889899999998877889999999999974 9999999999999999 8999
Q ss_pred EeCCHHHHHHHHHHhCCCceeecCCch-hHHHHHHhHcCCCccEEEeCCCc-chHHHHHHcc-ccCCEEEEEcccccccc
Q 042426 111 SARSKEKVDLLKHKFGFDDAFNYKEEP-DLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNM-RICGHIAVCGMISQYNI 187 (270)
Q Consensus 111 ~~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~ 187 (270)
+++++++.+.++ ++|++++++..+.+ ++.+.+.+.+.+++|+++||+|+ ..+..++..+ .++|+++.+|.....
T Consensus 221 ~~~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~-- 297 (373)
T cd08299 221 VDINKDKFAKAK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS-- 297 (373)
T ss_pred EcCCHHHHHHHH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC--
Confidence 999999999997 89999888876531 36677776665689999999996 4667767655 578999999875321
Q ss_pred cCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 188 EKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
....+... .+.++.++.+.+...+. .++.+.++.+.+.++.+. +.+.++|+++++++|++.+.+++. .|+++
T Consensus 298 --~~~~~~~~-~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~ 371 (373)
T cd08299 298 --QNLSINPM-LLLTGRTWKGAVFGGWK--SKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVL 371 (373)
T ss_pred --ceeecCHH-HHhcCCeEEEEEecCCc--cHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEE
Confidence 11122222 23467788887765432 134566677777777543 456688999999999999887664 47777
Q ss_pred Ee
Q 042426 266 AV 267 (270)
Q Consensus 266 ~~ 267 (270)
.+
T Consensus 372 ~~ 373 (373)
T cd08299 372 TF 373 (373)
T ss_pred eC
Confidence 53
No 102
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.97 E-value=8.8e-29 Score=207.72 Aligned_cols=241 Identities=18% Similarity=0.232 Sum_probs=192.3
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe-----------------------------------cccceeeEeecCCccceeccC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG-----------------------------------LTSWEEFSLIQSPQLLIKILD 49 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~~~p 49 (270)
+++|+|.++|++|++|++||+|++ .|+|++|++++++. ++++ |
T Consensus 60 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~i-P 137 (339)
T cd08232 60 EVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQ-CVPL-P 137 (339)
T ss_pred cceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHH-eEEC-c
Confidence 578999999999999999999986 27899999999999 9999 9
Q ss_pred CCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC
Q 042426 50 TSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD 128 (270)
Q Consensus 50 ~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~ 128 (270)
++ ++.+.|+++.+++++|+++.....+ ++++|||.| +|++|++++|+|+.+|+ +++++++++++.+.++ ++|++
T Consensus 138 ~~--~~~~~aa~~~~~~~a~~~l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~ 212 (339)
T cd08232 138 DG--LSLRRAALAEPLAVALHAVNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGAD 212 (339)
T ss_pred CC--CCHHHhhhcchHHHHHHHHHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCC
Confidence 98 6654344568888999998776666 899999977 59999999999999999 8999998888888777 88998
Q ss_pred ceeecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceee
Q 042426 129 DAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICME 207 (270)
Q Consensus 129 ~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (270)
+++++++. ++.. ... ..+++|+++||.|+ ..++..+++|+++|+++.+|.... ....+....+.+++++.
T Consensus 213 ~vi~~~~~-~~~~-~~~-~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~ 283 (339)
T cd08232 213 ETVNLARD-PLAA-YAA-DKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG------PVPLPLNALVAKELDLR 283 (339)
T ss_pred EEEcCCch-hhhh-hhc-cCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccCcHHHHhhcceEEE
Confidence 88888765 4211 111 12269999999985 578899999999999999876331 11223344456777776
Q ss_pred eccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 208 GFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
+... ..+.++++.+++.+|.+++ .+.+++++++++++++.+.+++..||+|+++
T Consensus 284 ~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 284 GSFR------FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred EEec------CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 6542 1356788999999998864 3567899999999999999888899999874
No 103
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.97 E-value=1.2e-28 Score=206.85 Aligned_cols=245 Identities=21% Similarity=0.239 Sum_probs=196.5
Q ss_pred cccceEEEEeecCCCCCCCCCEEEe---------------------------c---ccceeeEeecCCccceeccCCCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWG---------------------------L---TSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------~---g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
.+++|.|.++|+++++|++||+|++ + |+|++|++++++. ++++ |++
T Consensus 61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~-- 136 (340)
T TIGR00692 61 HEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQN-IWKN-PKS-- 136 (340)
T ss_pred cceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHH-cEEC-cCC--
Confidence 3577888889999999999999986 2 7899999999999 9999 998
Q ss_pred ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceee
Q 042426 54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
++.+.++++.++.+|++++ ....++|++++|.| +|++|++++|+++.+|++ |+++.+++++.+.++ ++|++++++
T Consensus 137 ~~~~~a~~~~~~~~a~~~~--~~~~~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~ 212 (340)
T TIGR00692 137 IPPEYATIQEPLGNAVHTV--LAGPISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVN 212 (340)
T ss_pred CChHhhhhcchHHHHHHHH--HccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEc
Confidence 5545567788889999876 34578899999976 599999999999999996 888877888888887 899988888
Q ss_pred cCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426 133 YKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL 210 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (270)
+++. ++.+.+.+..++ ++|+++||+|+ ..+...+++++++|+++.+|..... .+ .. ....+..+++++.+..
T Consensus 213 ~~~~-~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~---~~-~~-~~~~~~~~~~~~~~~~ 286 (340)
T TIGR00692 213 PFKE-DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK---VT-ID-FTNKVIFKGLTIYGIT 286 (340)
T ss_pred cccc-CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC---cc-cc-hhhhhhhcceEEEEEe
Confidence 8776 788888877665 89999999885 5788899999999999999875321 11 11 1224555666666544
Q ss_pred ccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 211 AGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.. ...+.+.++.++++++.+. +.+.+.+++++++++++.+.+++. ||+|+++
T Consensus 287 ~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 287 GR----HMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred cC----CchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 21 2235678899999999986 456688999999999999988874 9999874
No 104
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.97 E-value=1.4e-28 Score=206.29 Aligned_cols=247 Identities=21% Similarity=0.211 Sum_probs=202.8
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS 77 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~ 77 (270)
+++|+|.++|++++.|++||+|+++ |+|++|+.+++++ ++++ |++ ++. +++.++..+.+||.++.+.++
T Consensus 66 e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~~~~~~~~~~ta~~~l~~~~~ 141 (336)
T cd08252 66 DASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERI-VGHK-PKS--LSFAEAAALPLTSLTAWEALFDRLG 141 (336)
T ss_pred ceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHH-eeeC-CCC--CCHHHhhhhhhHHHHHHHHHHHhcC
Confidence 5678888899999999999999985 7899999999999 9999 988 554 478889999999999878888
Q ss_pred CCC-----CcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426 78 PKK-----GEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI 151 (270)
Q Consensus 78 ~~~-----g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~ 151 (270)
+.+ |++++|+|++|++|++++++++.+| ++|+++++++++.+.++ ++|+++++++++ ++.+.+.....+++
T Consensus 142 ~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~ 218 (336)
T cd08252 142 ISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPV 218 (336)
T ss_pred CCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCC
Confidence 887 9999999999999999999999999 89999999999999997 899988888764 56666665433489
Q ss_pred cEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-------ccchHHHHH
Q 042426 152 DIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-------YHQYPKFLE 223 (270)
Q Consensus 152 d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 223 (270)
|+++||+|+ ..+..++++++++|+++.+|... ...+...+..+++++.+...... +....+.++
T Consensus 219 d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (336)
T cd08252 219 DYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILN 290 (336)
T ss_pred CEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeeccccccccchhhHHHHHH
Confidence 999999985 68899999999999999997632 12333344467778777554321 112346788
Q ss_pred HHHHHHHCCceeeeee---eecCcccHHHHHHHHhcCCccceEEEE
Q 042426 224 LVMLAIKEGKLVYVED---IAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 224 ~~~~~~~~g~~~~~~~---~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
++.+++.+|.+.+.+. ..+++++++++++.+.+++..+|++++
T Consensus 291 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 291 EVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 8999999999987533 347999999999999999989999874
No 105
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.97 E-value=9.1e-29 Score=207.77 Aligned_cols=244 Identities=21% Similarity=0.237 Sum_probs=194.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL 54 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~ 54 (270)
+++|+|.++|++++.|++||+|++. |+|++|+.++++. ++++ |++ +
T Consensus 64 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-P~~--l 139 (341)
T PRK05396 64 EFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFN-VWKI-PDD--I 139 (341)
T ss_pred eeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHH-eEEC-cCC--C
Confidence 5778888999999999999999863 8999999999999 9999 998 5
Q ss_pred cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426 55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNY 133 (270)
Q Consensus 55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~ 133 (270)
+.+.+++..++.+++.++.. ...+|++++|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|+++++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~ 215 (341)
T PRK05396 140 PDDLAAIFDPFGNAVHTALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNV 215 (341)
T ss_pred CHHHhHhhhHHHHHHHHHHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecC
Confidence 65433455666667665532 3468999999874 9999999999999999 6888888888998888 8999989988
Q ss_pred CCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426 134 KEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA 211 (270)
Q Consensus 134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (270)
++. ++.+.+.+.+++ ++|++|||.|+ ..+..++++++++|+++.+|..+. . .......+..++.++.++..
T Consensus 216 ~~~-~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~l~~~~~ 288 (341)
T PRK05396 216 AKE-DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-----D-MAIDWNKVIFKGLTIKGIYG 288 (341)
T ss_pred ccc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-----C-CcccHHHHhhcceEEEEEEc
Confidence 876 788888887766 89999999986 578899999999999999987442 1 11224566667777776543
Q ss_pred cCcccchHHHHHHHHHHHHCC-ceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426 212 GDFYHQYPKFLELVMLAIKEG-KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA 268 (270)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 268 (270)
... .+.+..+.+++.++ ++.+.+.+.+++++++++++.+.+++ .||++++++
T Consensus 289 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 289 REM----FETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred cCc----cchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 221 23456778888888 45566678899999999999998877 799999874
No 106
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=1.5e-28 Score=207.27 Aligned_cols=256 Identities=20% Similarity=0.202 Sum_probs=192.1
Q ss_pred ccceEEEEeecCCC-CCCCCCEEEec--------ccceeeEeecCC----ccceeccCCCCCccc-cccccCchhhhHHH
Q 042426 5 SGYGVSKVLDSTHP-NYKKDDLVWGL--------TSWEEFSLIQSP----QLLIKILDTSVPLPY-YTGILGMPGLTAYG 70 (270)
Q Consensus 5 ~g~g~v~~vG~~v~-~~~~Gd~V~~~--------g~~~~~~~v~~~----~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~ 70 (270)
+++|+|.++|++++ +|++||+|+++ |+|++|+++++. . ++++ |++ ++. +++.++.++.|||+
T Consensus 65 e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~-~~~l-P~~--l~~~~aa~~~~~~~ta~~ 140 (352)
T cd08247 65 DYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKS-ITRK-PEN--ISLEEAAAWPLVLGTAYQ 140 (352)
T ss_pred eeEEEEEEeCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccce-eEEC-CCC--CCHHHHHHhHHHHHHHHH
Confidence 56788888999998 89999999874 799999999987 6 8999 988 555 58888999999999
Q ss_pred Hhhhhc-CCCCCcEEEEecCCchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchh---HHHHHH
Q 042426 71 GLHELC-SPKKGEYVYVSAASGAVGQLVGQFVKLV-GC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD---LDAALN 144 (270)
Q Consensus 71 ~l~~~~-~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~---~~~~i~ 144 (270)
++.+.+ ++++|++++|+|+++++|++++++|+.+ +. .++++. ++++.+.++ ++|++++++.++. + +...+.
T Consensus 141 ~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~ 217 (352)
T cd08247 141 ILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFIDYDAH-SGVKLLKPVL 217 (352)
T ss_pred HHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEEecCCC-cccchHHHHH
Confidence 997777 7999999999999999999999999987 55 677776 556666776 8999888887765 4 444444
Q ss_pred h-HcCC-CccEEEeCCCc-chHHHHHHccc---cCCEEEEEcccccccccC-CC----CccchHHHHhhcceeeeccccC
Q 042426 145 R-CFPE-GIDIYFENVGG-KMLDAVLLNMR---ICGHIAVCGMISQYNIEK-PE----GVHNLMQVVGKRICMEGFLAGD 213 (270)
Q Consensus 145 ~-~~~~-~~d~v~d~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~ 213 (270)
+ .+++ ++|++|||+|+ .....++++++ ++|+++.++.....+... .. ........+.+++++.......
T Consensus 218 ~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
T cd08247 218 ENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQF 297 (352)
T ss_pred HhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEE
Confidence 4 3424 89999999998 57788999999 999999874321100000 00 0000011123344333333221
Q ss_pred c-ccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 214 F-YHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 214 ~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
. .....+.++++.+++.++.+.+.+.+++++++++++++.+.+++..||+++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 298 FLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred EEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 1 11114678889999999999987778899999999999999998899999864
No 107
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.97 E-value=2.1e-28 Score=205.54 Aligned_cols=242 Identities=21% Similarity=0.226 Sum_probs=194.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL 54 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~ 54 (270)
+++|+|..+|++++.|++||+|+++ |+|++|++++++. ++++ |++ +
T Consensus 64 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~l-P~~--~ 139 (341)
T cd05281 64 EFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEEN-LWKN-DKD--I 139 (341)
T ss_pred ceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHH-cEEC-cCC--C
Confidence 5678888899999999999999873 7899999999999 9999 988 5
Q ss_pred cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426 55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNY 133 (270)
Q Consensus 55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~ 133 (270)
+.+.++++.++.++++++. ...++|++|+|+|+ |++|++++|+++.+|+ +|+++++++++.+.++ ++|+++++++
T Consensus 140 ~~~~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~ 215 (341)
T cd05281 140 PPEIASIQEPLGNAVHTVL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINP 215 (341)
T ss_pred CHHHhhhhhHHHHHHHHHH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCc
Confidence 5456677888888988774 45678999999875 9999999999999999 7999988888888888 8999888887
Q ss_pred CCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426 134 KEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA 211 (270)
Q Consensus 134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (270)
+.. ++. .+.+..++ ++|++|||+|+ .....++++|+++|+++.+|..... ... ........+++.+.+...
T Consensus 216 ~~~-~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~--~~~~~~~~~~~~~~~~~~ 288 (341)
T cd05281 216 REE-DVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP---VDI--DLNNLVIFKGLTVQGITG 288 (341)
T ss_pred ccc-cHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC---ccc--ccchhhhccceEEEEEec
Confidence 765 777 78877776 89999999986 4778999999999999998864320 110 112234556666665542
Q ss_pred cCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 212 GDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.. ..+.+.++.+++.++.+. +.+...+++++++++++.+.+++ .||+|++
T Consensus 289 ~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~ 340 (341)
T cd05281 289 RK----MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLY 340 (341)
T ss_pred CC----cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence 22 235577889999999976 34557789999999999999988 8999986
No 108
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=3.9e-28 Score=204.28 Aligned_cols=245 Identities=18% Similarity=0.188 Sum_probs=198.3
Q ss_pred cccceEEEEeecCCCCCCCCCEEEe-c-----------------------------ccceeeEeecCC--ccceeccCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWG-L-----------------------------TSWEEFSLIQSP--QLLIKILDTS 51 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~-~-----------------------------g~~~~~~~v~~~--~~~~~~~p~~ 51 (270)
.+++|+|.++|++++.+++||+|++ + |+|++|+.++.+ . ++++ |++
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P~~ 136 (345)
T cd08287 59 HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGT-LVKV-PGS 136 (345)
T ss_pred cceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCc-eEEC-CCC
Confidence 3677889999999999999999986 1 788999999974 7 9999 998
Q ss_pred CCcccc----ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhC
Q 042426 52 VPLPYY----TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFG 126 (270)
Q Consensus 52 ~~~~~~----~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g 126 (270)
++.... .+++...+++||+++ +.+++++|++++|.| +|++|++++|+|+..|++ ++++++++++.+.++ ++|
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g 213 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFG 213 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcC
Confidence 443111 124446788999998 468899999999976 699999999999999995 788887877888887 899
Q ss_pred CCceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcc
Q 042426 127 FDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI 204 (270)
Q Consensus 127 ~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 204 (270)
++.++++++. ++.+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.+|.... ....+....+.+++
T Consensus 214 a~~v~~~~~~-~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~ 286 (345)
T cd08287 214 ATDIVAERGE-EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------GVELDVRELFFRNV 286 (345)
T ss_pred CceEecCCcc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------CCccCHHHHHhcce
Confidence 9999998876 788888887776 89999999986 588999999999999999886441 12244446677888
Q ss_pred eeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
++.+.... ..+.++++.+++.++.+++ .+...+++++++++++.+.+++.. |++|+
T Consensus 287 ~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 287 GLAGGPAP-----VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred EEEEecCC-----cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 88774332 2567899999999999886 356788999999999998877654 99885
No 109
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.97 E-value=5.5e-28 Score=204.71 Aligned_cols=243 Identities=17% Similarity=0.183 Sum_probs=191.8
Q ss_pred cccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSV 52 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~ 52 (270)
.+++|+|.++|+++++|++||+|++ .|+|++|++++++. ++++ |++
T Consensus 79 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~-~~~~-P~~- 155 (364)
T PLN02702 79 HECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADL-CFKL-PEN- 155 (364)
T ss_pred cceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHH-eEEC-CCC-
Confidence 3577888899999999999999986 27899999999999 9999 998
Q ss_pred CccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCcee
Q 042426 53 PLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAF 131 (270)
Q Consensus 53 ~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi 131 (270)
++++.+++..++.++|+++ ...++.++++++|+| +|++|++++++++.+|++ ++++++++++.+.++ ++|++.++
T Consensus 156 -l~~~~aa~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~ 231 (364)
T PLN02702 156 -VSLEEGAMCEPLSVGVHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIV 231 (364)
T ss_pred -CCHHHHhhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEE
Confidence 5654333334556688887 678899999999997 599999999999999995 777777888888887 89998776
Q ss_pred ecC--CchhHHHHHHhH---cCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcce
Q 042426 132 NYK--EEPDLDAALNRC---FPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRIC 205 (270)
Q Consensus 132 ~~~--~~~~~~~~i~~~---~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (270)
++. +. ++.+.+.+. .++++|++|||+|+ ..+..++++++++|+++.+|.... . ..........++++
T Consensus 232 ~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~ 304 (364)
T PLN02702 232 LVSTNIE-DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-----E-MTVPLTPAAAREVD 304 (364)
T ss_pred ecCcccc-cHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-----C-CcccHHHHHhCccE
Confidence 653 33 666666544 23379999999994 688999999999999999986431 1 22345566777888
Q ss_pred eeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCc--ccHHHHHHHHhcCCccceEEEE
Q 042426 206 MEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGL--EKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+.+++.. ...++.+.++++++.+. +.+..+|++ +++++|++.+.+++..+|+++.
T Consensus 305 i~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 305 VVGVFRY------RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred EEEeccC------hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 8876542 24678889999999885 445677555 7999999999988888999985
No 110
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.97 E-value=6.2e-28 Score=202.17 Aligned_cols=240 Identities=26% Similarity=0.339 Sum_probs=193.4
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVPL 54 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~~ 54 (270)
+++|+|..+|+++++|++||+|++ .|+|++|++++++. ++++ |++ +
T Consensus 59 ~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~--~ 134 (334)
T cd08234 59 EFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQ-VYKI-PDN--L 134 (334)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHH-cEEC-cCC--C
Confidence 577888889999999999999976 27899999999999 9999 998 5
Q ss_pred ccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceee
Q 042426 55 PYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 55 ~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
+.. ++.+ ..+.++++++ ..+++++|++|+|+|+ |++|++++++|+.+|++ |+++++++++.+.++ ++|++.+++
T Consensus 135 ~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~ 210 (334)
T cd08234 135 SFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVD 210 (334)
T ss_pred CHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEec
Confidence 543 4444 7788999988 7789999999999975 99999999999999997 888998999999997 899887888
Q ss_pred cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426 133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA 211 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (270)
+.+. ++... +...++++|+++||+|. .....++++++++|+++.+|..... .....+...++.+++++.+...
T Consensus 211 ~~~~-~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 284 (334)
T cd08234 211 PSRE-DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFI 284 (334)
T ss_pred CCCC-CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEecc
Confidence 7765 55544 33333489999999975 5788999999999999999875421 1122334444557777776653
Q ss_pred cCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 212 GDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
. .+.++++.+++.++.+.+. +..++++++++++++.+.+ ...+|+|+
T Consensus 285 ~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 285 N------PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred C------HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 2 3568889999999998753 5678999999999999998 77889886
No 111
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.2e-28 Score=203.66 Aligned_cols=249 Identities=21% Similarity=0.245 Sum_probs=195.0
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
+++|.|.++|++++.|++||+|+++ |+|++|+.++++. ++++ |++ ++. ++++++.++.+||+++.+.+++.+
T Consensus 64 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~a~~~~~~~~ta~~~l~~~~~~~~ 139 (331)
T cd08273 64 DLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKY-LVPV-PEG--VDAAEAVCLVLNYVTAYQMLHRAAKVLT 139 (331)
T ss_pred ceEEEEEEeCCCCccCCCCCEEEEeCCCcceeeEEEechHH-eEEC-CCC--CCHHHHHhhhhHHHHHHHHHHHhcCCCC
Confidence 5678888999999999999999986 8999999999999 9999 988 554 478899999999999988789999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 160 (270)
|++++|+|++|++|++++++++..|++|+++++ +++.+.++ ++|+. .++.... ++... +...+++|+++||+++
T Consensus 140 g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~-~~~~~~~-~~~~~--~~~~~~~d~vl~~~~~ 213 (331)
T cd08273 140 GQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGAT-PIDYRTK-DWLPA--MLTPGGVDVVFDGVGG 213 (331)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCe-EEcCCCc-chhhh--hccCCCceEEEECCch
Confidence 999999999999999999999999999999997 88888887 88865 3455544 45444 3333479999999999
Q ss_pred chHHHHHHccccCCEEEEEcccccccccCCCCccch------------HHHHhhcceeeeccccC--cccchHHHHHHHH
Q 042426 161 KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL------------MQVVGKRICMEGFLAGD--FYHQYPKFLELVM 226 (270)
Q Consensus 161 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 226 (270)
.....++++++++|+++.+|....... .....+. .....+++++.+..... .+....+.+.++.
T Consensus 214 ~~~~~~~~~l~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 291 (331)
T cd08273 214 ESYEESYAALAPGGTLVCYGGNSSLLQ--GRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELL 291 (331)
T ss_pred HHHHHHHHHhcCCCEEEEEccCCCCCC--ccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHH
Confidence 888999999999999999987543211 0000100 01112233333322211 1233457889999
Q ss_pred HHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 227 LAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 227 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
+++.+|.+.+.+..++++++++++++.+.+++..||+|+
T Consensus 292 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 292 DLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 999999998877788999999999999998888889885
No 112
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.96 E-value=7.6e-28 Score=200.79 Aligned_cols=246 Identities=21% Similarity=0.233 Sum_probs=195.0
Q ss_pred cceEEEEeecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh-
Q 042426 6 GYGVSKVLDSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE- 74 (270)
Q Consensus 6 g~g~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~- 74 (270)
++|+|.. ++++++++||+|+++ |+|++|+.++.+. ++++ |++ ++. +++.++..+++++.++..
T Consensus 65 ~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~--~~~~~~~~~~~~~~ta~~~~~~~ 138 (324)
T cd08288 65 LAGTVVE--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADW-LVPL-PEG--LSARQAMAIGTAGFTAMLCVMAL 138 (324)
T ss_pred eEEEEEe--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHH-eeeC-CCC--CCHHHHhhhhhHHHHHHHHHHHH
Confidence 4555555 777889999999973 7899999999999 9999 998 555 488889999999877641
Q ss_pred -hcCCC-CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCcc
Q 042426 75 -LCSPK-KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGID 152 (270)
Q Consensus 75 -~~~~~-~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d 152 (270)
..+.. ++++++|+|++|++|++++|+|+.+|++|++++.++++.+.++ ++|+++++++++. . ..+....++++|
T Consensus 139 ~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~--~~~~~~~~~~~~ 214 (324)
T cd08288 139 EDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL-S--EPGRPLQKERWA 214 (324)
T ss_pred hhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh-h--HhhhhhccCccc
Confidence 23444 6789999999999999999999999999999999999999997 8999888887653 2 245555555689
Q ss_pred EEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc-cchHHHHHHHHHHHHC
Q 042426 153 IYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY-HQYPKFLELVMLAIKE 231 (270)
Q Consensus 153 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 231 (270)
.++|++++..+...+..++.+|+++.+|.... .....+...++.+++++.+.+..... ....+.+..+.+++.+
T Consensus 215 ~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (324)
T cd08288 215 GAVDTVGGHTLANVLAQTRYGGAVAACGLAGG-----ADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDP 289 (324)
T ss_pred EEEECCcHHHHHHHHHHhcCCCEEEEEEecCC-----CCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhc
Confidence 99999998777788889999999999987531 11123344455788898887644331 2345677888888999
Q ss_pred CceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 232 GKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 232 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
+.+.+. ...+++++++++++.+.+++..+|+++++
T Consensus 290 ~~~~~i-~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 290 ALLEAL-TREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred CCcccc-ceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 988764 57899999999999999999999999864
No 113
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=8.6e-28 Score=200.36 Aligned_cols=246 Identities=23% Similarity=0.339 Sum_probs=204.7
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec--------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhh
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL--------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHEL 75 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~ 75 (270)
+++|.|..+|+++.+|++||+|+++ |+|++|+.+++++ ++++ |++ ++. .++.++..+.+||+++.+.
T Consensus 64 e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~l~~~ 139 (326)
T cd08272 64 DVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARL-LALK-PAN--LSMREAAALPLVGITAWEGLVDR 139 (326)
T ss_pred ceeEEEEEeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHH-cccC-CCC--CCHHHHHHhHHHHHHHHHHHHHh
Confidence 5678898999999999999999985 6899999999999 9999 988 555 4788888999999998788
Q ss_pred cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEE
Q 042426 76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIY 154 (270)
Q Consensus 76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v 154 (270)
+++++|++++|+|+++++|++++++++..|++|++++++ ++.+.++ ++|++.+++... .+.+.+.+.+++ ++|.+
T Consensus 140 ~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v 215 (326)
T cd08272 140 AAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVEYVAEHTGGRGFDVV 215 (326)
T ss_pred cCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHHHHHHhcCCCCCcEE
Confidence 999999999999999999999999999999999999987 8888887 899887777654 366777777776 89999
Q ss_pred EeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC--c----ccchHHHHHHHHHH
Q 042426 155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD--F----YHQYPKFLELVMLA 228 (270)
Q Consensus 155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~ 228 (270)
+||+++.....+++++.++|+++.++... .........+++++.+..... . +....+.+.++.++
T Consensus 216 ~~~~~~~~~~~~~~~l~~~g~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (326)
T cd08272 216 FDTVGGETLDASFEAVALYGRVVSILGGA---------THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARL 286 (326)
T ss_pred EECCChHHHHHHHHHhccCCEEEEEecCC---------ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHH
Confidence 99999888888999999999999987642 011122336677777665432 1 22345678889999
Q ss_pred HHCCceeeeee-eecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 229 IKEGKLVYVED-IAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 229 ~~~g~~~~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
+.++.+.+.++ ..+++++++++++.+.+++..+|+++++
T Consensus 287 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 287 VERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 99999987755 7899999999999999888889999864
No 114
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.96 E-value=7.4e-28 Score=200.34 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=210.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
+++|.|..+|+++..+++||+|+++ |++++|+.++++. ++++ |++ ++. ++++++.++.+||.++.....+++
T Consensus 64 e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 139 (323)
T cd08241 64 EVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAA-VFPL-PDG--LSFEEAAALPVTYGTAYHALVRRARLQP 139 (323)
T ss_pred eeEEEEEEeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHH-ceeC-CCC--CCHHHHhhhhhHHHHHHHHHHHhcCCCC
Confidence 4678888899999999999999996 7999999999999 9999 988 444 477789999999999877888999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG 159 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g 159 (270)
+++++|+|++|++|++++++++..|++|+++++++++.+.++ ++|++.+++.... ++.+.+.+.+++ ++|.++||+|
T Consensus 140 ~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g 217 (323)
T cd08241 140 GETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVG 217 (323)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECcc
Confidence 999999999999999999999999999999999999999997 8898878877776 788888887776 8999999999
Q ss_pred cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc----cchHHHHHHHHHHHHCCcee
Q 042426 160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY----HQYPKFLELVMLAIKEGKLV 235 (270)
Q Consensus 160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~ 235 (270)
+.....++++++++|+++.+|.... .....+....+.+++++.+.....+. ....+.+.++.+++.++.+.
T Consensus 218 ~~~~~~~~~~~~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (323)
T cd08241 218 GDVFEASLRSLAWGGRLLVIGFASG-----EIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR 292 (323)
T ss_pred HHHHHHHHHhhccCCEEEEEccCCC-----CcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence 8888899999999999999886431 11112233456688888887765441 12346788899999999998
Q ss_pred eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 236 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 236 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+.....|++++++++++.+.++...+|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 293 PHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred cccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 7777889999999999999988888888863
No 115
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.96 E-value=7.1e-28 Score=201.08 Aligned_cols=233 Identities=26% Similarity=0.330 Sum_probs=188.8
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL 54 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~ 54 (270)
+++|.|..+|++++.|++||+|+++ |+|++|+.++++. ++++ |++ +
T Consensus 61 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~--~ 136 (325)
T cd08264 61 EFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKN-LFKI-PDS--I 136 (325)
T ss_pred ceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHH-ceeC-CCC--C
Confidence 5678888899999999999999853 7899999999999 9999 998 5
Q ss_pred cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426 55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY 133 (270)
Q Consensus 55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~ 133 (270)
+. +++.++.++.+||+++.. +++++|++++|+|++|++|++++++|+.+|++|+++++ .+.++ ++|++++++.
T Consensus 137 ~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~ 210 (325)
T cd08264 137 SDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDY 210 (325)
T ss_pred CHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecc
Confidence 54 588889999999999855 88999999999999999999999999999999988873 36666 7998888776
Q ss_pred CCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC
Q 042426 134 KEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD 213 (270)
Q Consensus 134 ~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (270)
++ ..+.+.+.+ +++|+++|++|+..+..++++++++|+++.+|.... .....+...+..++.++.+...+.
T Consensus 211 ~~---~~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 281 (325)
T cd08264 211 DE---VEEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG-----GEVKLDLSDLYSKQISIIGSTGGT 281 (325)
T ss_pred hH---HHHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCC-----CCCccCHHHHhhcCcEEEEccCCC
Confidence 43 344555555 679999999998889999999999999999986421 123345556666777777765433
Q ss_pred cccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceE
Q 042426 214 FYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQ 263 (270)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~ 263 (270)
++.++++.+++...+ ..+...|+++++++|++.+.+++..+|+
T Consensus 282 -----~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 282 -----RKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred -----HHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 467788888886444 4456789999999999999988777775
No 116
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.96 E-value=3.8e-28 Score=204.72 Aligned_cols=253 Identities=23% Similarity=0.339 Sum_probs=192.4
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS 77 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~ 77 (270)
+++|+|..+|+++++|++||+|+++ |+|++|+.++++. ++++ |++ ++. +++.++.++.+||+++...+.
T Consensus 80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~--~~~~~aa~~~~~~~ta~~~l~~~~~ 155 (350)
T cd08248 80 DCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENE-VSKK-PKN--LSHEEAASLPYAGLTAWSALVNVGG 155 (350)
T ss_pred eeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHH-eecC-CCC--CCHHHHhhchhHHHHHHHHHHHhcc
Confidence 4668888899999999999999983 8999999999999 9999 998 554 488899999999999877777
Q ss_pred CCC----CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426 78 PKK----GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDI 153 (270)
Q Consensus 78 ~~~----g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~ 153 (270)
+.+ |++++|+|++|++|++++++++.+|++|++++++ ++.+.++ ++|.+++++..+. ++.+.+... +++|+
T Consensus 156 ~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~--~~vd~ 230 (350)
T cd08248 156 LNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE-DFEEELTER--GKFDV 230 (350)
T ss_pred CCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-hHHHHHHhc--CCCCE
Confidence 754 9999999999999999999999999999998855 5677777 8999888887765 566555432 37999
Q ss_pred EEeCCCcchHHHHHHccccCCEEEEEcccccccccC-CC--Cccc-hHHHHhhcce-ee-eccc-cCcccchHHHHHHHH
Q 042426 154 YFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEK-PE--GVHN-LMQVVGKRIC-ME-GFLA-GDFYHQYPKFLELVM 226 (270)
Q Consensus 154 v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~--~~~~-~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~ 226 (270)
++||+|+.....++++++++|+++.+|......... .. ..+. ...+...... +. +... +.......+.+.++.
T Consensus 231 vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (350)
T cd08248 231 ILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELA 310 (350)
T ss_pred EEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHH
Confidence 999999988999999999999999998643210000 00 0000 0011111110 00 0000 000122357789999
Q ss_pred HHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 227 LAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 227 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
+++.+|.+.+.+...+++++++++++.+.+++..+|++++
T Consensus 311 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 311 KLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 9999999988777889999999999999988888888863
No 117
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=7.4e-28 Score=196.57 Aligned_cols=240 Identities=22% Similarity=0.243 Sum_probs=188.2
Q ss_pred cccceEEEEeecCCCCCCCCCEEEecccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCc
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGE 82 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~ 82 (270)
.+++|+|.++|+++++|++||+|+++++|++|++++++. ++++ |++ ++. +++.+ .++++||+++. .+++++|+
T Consensus 26 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~-~~~i-p~~--l~~~~aa~~-~~~~ta~~~~~-~~~~~~g~ 99 (277)
T cd08255 26 YSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANL-LVPL-PDG--LPPERAALT-ALAATALNGVR-DAEPRLGE 99 (277)
T ss_pred cceeEEEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHH-eeEC-cCC--CCHHHhHHH-HHHHHHHHHHH-hcCCCCCC
Confidence 456688888999999999999999999999999999999 9999 988 554 45666 78999999984 78999999
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhC-CCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFG-FDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 160 (270)
+++|+|+ |++|++++++|+.+|++ |+++++++++.+.++ ++| ++++++.... ....+++|++|||++.
T Consensus 100 ~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~--------~~~~~~~d~vl~~~~~ 169 (277)
T cd08255 100 RVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTAD--------EIGGRGADVVIEASGS 169 (277)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccchh--------hhcCCCCCEEEEccCC
Confidence 9999974 99999999999999998 999999999999887 888 4544433221 0122379999999885
Q ss_pred -chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc-------cchHHHHHHHHHHHHCC
Q 042426 161 -KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY-------HQYPKFLELVMLAIKEG 232 (270)
Q Consensus 161 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g 232 (270)
.....++++++++|+++.+|..... .......+..+.+++.+....... ....+.++++.+++.++
T Consensus 170 ~~~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 243 (277)
T cd08255 170 PSALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEG 243 (277)
T ss_pred hHHHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcC
Confidence 5788999999999999999875421 111122344455577766654321 12236789999999999
Q ss_pred ceeeeeeeecCcccHHHHHHHHhcC-CccceEEE
Q 042426 233 KLVYVEDIAEGLEKAPSALVGIFTG-QNVGKQLV 265 (270)
Q Consensus 233 ~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv 265 (270)
.+.+.+...+++++++++++.+.++ ....|+++
T Consensus 244 ~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 244 RLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred CccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 9988777889999999999999877 35567653
No 118
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.7e-27 Score=196.59 Aligned_cols=247 Identities=21% Similarity=0.320 Sum_probs=202.5
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS 77 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~ 77 (270)
+++|.|..+|++++++++||+|+++ |+|++|+.++++. ++++ |++ ++. +++.+++++.+|++++.+.++
T Consensus 63 e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~-~~~i-p~~--~~~~~~a~~~~~~~~a~~~~~~~~~ 138 (325)
T cd08271 63 DGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARA-VLPL-PDS--LSFEEAAALPCAGLTAYQALFKKLR 138 (325)
T ss_pred ceEEEEEEeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHH-eEEC-CCC--CCHHHHHhhhhhHHHHHHHHHHhcC
Confidence 5678888899999999999999985 7899999999999 9999 988 554 478899999999999988889
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEe
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFE 156 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d 156 (270)
+++|++++|+|+++++|++++++++..|++|+++. ++++.+.+. ++|++.+++.... ++.+.+.+...+ ++|.++|
T Consensus 139 ~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~ 215 (325)
T cd08271 139 IEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLD 215 (325)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEE
Confidence 99999999999989999999999999999999888 777888887 8999888887776 777778877766 8999999
Q ss_pred CCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc----c----cchHHHHHHHHHH
Q 042426 157 NVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF----Y----HQYPKFLELVMLA 228 (270)
Q Consensus 157 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~ 228 (270)
|+++.....++++++++|+++.++..... . ....+.+++.+....+... + ....+.+.++.++
T Consensus 216 ~~~~~~~~~~~~~l~~~G~~v~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd08271 216 TVGGETAAALAPTLAFNGHLVCIQGRPDA----S-----PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLEL 286 (325)
T ss_pred CCCcHhHHHHHHhhccCCEEEEEcCCCCC----c-----chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHH
Confidence 99988778899999999999998754321 0 1122344444444333221 1 2344667889999
Q ss_pred HHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 229 IKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 229 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
+.++.+.+.....++++++.++++.+.+++..+|+++++
T Consensus 287 ~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 287 LAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 999999887667899999999999999888889999863
No 119
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.96 E-value=4.4e-27 Score=196.70 Aligned_cols=238 Identities=23% Similarity=0.287 Sum_probs=194.4
Q ss_pred ccceEEEEeecCCCCCCCCCEEE----------------------------ec---ccceeeEeecCCccceeccCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVW----------------------------GL---TSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~----------------------------~~---g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
+++|+|..+|+++++|++||+|+ ++ |++++|+.++++. ++++ |++
T Consensus 60 e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~-- 135 (330)
T cd08245 60 EIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEY-TVLL-PDG-- 135 (330)
T ss_pred cceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHH-eEEC-CCC--
Confidence 57788999999999999999997 32 7899999999999 9999 998
Q ss_pred ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426 54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
++. +++.++..+++||.++.. .+++++++|+|+|+ |++|++++++|+.+|++|+++++++++.+.++ ++|++.+++
T Consensus 136 ~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~ 212 (330)
T cd08245 136 LPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVD 212 (330)
T ss_pred CCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEec
Confidence 554 578899999999999855 78999999999975 88999999999999999999999999999997 899887777
Q ss_pred cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426 133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA 211 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (270)
..+. +.... ..+++|+++||++. .....++++++++|+++.++.... .....+...+..++.++.+...
T Consensus 213 ~~~~-~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 282 (330)
T cd08245 213 SGAE-LDEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPES-----PPFSPDIFPLIMKRQSIAGSTH 282 (330)
T ss_pred cCCc-chHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCC-----CccccchHHHHhCCCEEEEecc
Confidence 6654 33332 22369999999875 678899999999999999986432 1112223446667777777665
Q ss_pred cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
.. .+.++++.+++.++.+.+ ....+++++++++++.+.+++..+|+|+
T Consensus 283 ~~-----~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 283 GG-----RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred CC-----HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 43 467888899999999886 3467899999999999999998899875
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=7e-27 Score=195.86 Aligned_cols=256 Identities=24% Similarity=0.368 Sum_probs=204.9
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK 80 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~ 80 (270)
+++|.|..+|+++.+|++||+|+++ |+|++|+.++.+. ++++ |++ ++. +++.++.+++++|+++...+++++
T Consensus 63 e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 138 (337)
T cd08275 63 ECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQ-VFPL-PDG--MSFEEAAAFPVNYLTAYYALFELGNLRP 138 (337)
T ss_pred eeEEEEEEECCCCcCCCCCCEEEEecCCCeeeeEEEecHHH-eEEC-CCC--CCHHHHhhhhHHHHHHHHHHHHhhCCCC
Confidence 5678888899999999999999997 7999999999999 9999 988 554 478888999999999988899999
Q ss_pred CcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
|++++|+|++|++|++++++++.+ +..++... .+++.+.++ .+|++.+++.... ++...+...+++++|+++||+|
T Consensus 139 ~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g 215 (337)
T cd08275 139 GQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALG 215 (337)
T ss_pred CCEEEEEcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCc
Confidence 999999999999999999999998 43443332 455778887 8998888887776 7878887776558999999999
Q ss_pred cchHHHHHHccccCCEEEEEcccccccccCC-----------CCccchHHHHhhcceeeeccccCcc---cchHHHHHHH
Q 042426 160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKP-----------EGVHNLMQVVGKRICMEGFLAGDFY---HQYPKFLELV 225 (270)
Q Consensus 160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 225 (270)
+.....++++++++|+++.+|.......... .........+.+++++.+....... ......+.++
T Consensus 216 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (337)
T cd08275 216 GEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKL 295 (337)
T ss_pred HHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHH
Confidence 9888999999999999999986542110000 0112224556778888887764321 1223467888
Q ss_pred HHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426 226 MLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267 (270)
Q Consensus 226 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 267 (270)
.+++.++.+.+.....|++++++++++.+.+++..+|+++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 296 LKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 899999999887778899999999999999988889999864
No 121
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.96 E-value=1.2e-26 Score=194.02 Aligned_cols=232 Identities=18% Similarity=0.124 Sum_probs=188.6
Q ss_pred ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
+++|+|.++|+++.+|++||+|++ .|+|++|+.++.+. ++++ |++
T Consensus 65 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~-- 140 (329)
T cd08298 65 EIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERF-AYPI-PED-- 140 (329)
T ss_pred cccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchh-EEEC-CCC--
Confidence 578899999999999999999975 27899999999999 9999 998
Q ss_pred ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426 54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
++. ++++++++++|||+++ ..++++++++++|+| +|++|++++++++..|++|+++++++++.+.++ ++|++++++
T Consensus 141 ~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~ 217 (329)
T cd08298 141 YDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGD 217 (329)
T ss_pred CCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEec
Confidence 554 5889999999999999 889999999999997 599999999999999999999999999999997 899877776
Q ss_pred cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426 133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA 211 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (270)
.... ..+++|+++++.+. ..++.++++++++|+++.+|.... .....+... +.++..+.+...
T Consensus 218 ~~~~----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~-~~~~~~i~~~~~ 281 (329)
T cd08298 218 SDDL----------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYEL-LWGEKTIRSVAN 281 (329)
T ss_pred cCcc----------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchhh-hhCceEEEEecC
Confidence 5431 12369999998654 588999999999999998875221 111122222 334555554433
Q ss_pred cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
. ..+.++++.++++++.+++. ..+++++++++|++.+.+++..||+|+
T Consensus 282 ~-----~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 282 L-----TRQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred C-----CHHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 2 24678889999999998874 478999999999999999999999874
No 122
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.96 E-value=7.3e-27 Score=194.52 Aligned_cols=229 Identities=21% Similarity=0.213 Sum_probs=181.1
Q ss_pred cccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCC
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSV 52 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~ 52 (270)
.+++|+|.++|++ +++||+|.. .|+|++|+++++++ ++++ |++
T Consensus 56 ~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~- 129 (319)
T cd08242 56 HEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLEN-LHVV-PDL- 129 (319)
T ss_pred ceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHH-eEEC-cCC-
Confidence 4577888889987 679999962 27899999999999 9999 998
Q ss_pred CccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426 53 PLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN 132 (270)
Q Consensus 53 ~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~ 132 (270)
++.+.+++..+..++|.++ +..+++++++|+|+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|++.+++
T Consensus 130 -~~~~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~ 205 (319)
T cd08242 130 -VPDEQAVFAEPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLP 205 (319)
T ss_pred -CCHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeC
Confidence 5554333325556677665 678899999999997 599999999999999999999999999999999 799987766
Q ss_pred cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426 133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA 211 (270)
Q Consensus 133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (270)
+++. ..++++|+++||+|+ ..+..++++++++|+++..+... .....+...+..++.++.+...
T Consensus 206 ~~~~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~------~~~~~~~~~~~~~~~~i~~~~~ 270 (319)
T cd08242 206 DEAE---------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYA------GPASFDLTKAVVNEITLVGSRC 270 (319)
T ss_pred cccc---------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccC------CCCccCHHHheecceEEEEEec
Confidence 5431 122379999999987 57889999999999999866532 1223445566677888877654
Q ss_pred cCcccchHHHHHHHHHHHHCCce--eeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426 212 GDFYHQYPKFLELVMLAIKEGKL--VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266 (270)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 266 (270)
.. ++++.+++.++++ .+.+.+.|+++++++|++.+.++. .+|+|++
T Consensus 271 ~~--------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 271 GP--------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred cc--------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 32 6788899999998 556778999999999999998765 5799885
No 123
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.4e-26 Score=192.59 Aligned_cols=243 Identities=26% Similarity=0.317 Sum_probs=188.4
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS 77 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~ 77 (270)
+++|.|.++|+++++|++||+|+++ |++++|+.++++. ++++ |++ ++. +++.+++++.+||+++....+
T Consensus 65 e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~ 140 (319)
T cd08267 65 DFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESG-LAKK-PEG--VSFEEAAALPVAGLTALQALRDAGK 140 (319)
T ss_pred eeeEEEEEeCCCCCCCCCCCEEEEeccCCCCceeeEEEEechhh-eEEC-CCC--CCHHHHHhhhhHHHHHHHHHHHhcC
Confidence 5678888899999999999999985 7899999999999 9999 998 554 588899999999999988888
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEe
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFE 156 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d 156 (270)
+++|++++|+|++|++|++++++++.+|++|++++++ ++.+.++ ++|.+++++.... ++. .....+ ++|+++|
T Consensus 141 ~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~ 214 (319)
T cd08267 141 VKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFD 214 (319)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEE
Confidence 9999999999999999999999999999999999865 8888887 8998888877654 443 333444 8999999
Q ss_pred CCCcc--hHHHHHHccccCCEEEEEcccccccccCCCCccc--hHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCC
Q 042426 157 NVGGK--MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHN--LMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEG 232 (270)
Q Consensus 157 ~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 232 (270)
|+++. .....+..++++|+++.+|...... .. ... ..........+...... + ..+.+.++.+++.++
T Consensus 215 ~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~ 286 (319)
T cd08267 215 AVGNSPFSLYRASLALKPGGRYVSVGGGPSGL---LL-VLLLLPLTLGGGGRRLKFFLAK--P--NAEDLEQLAELVEEG 286 (319)
T ss_pred CCCchHHHHHHhhhccCCCCEEEEeccccccc---cc-cccccchhhccccceEEEEEec--C--CHHHHHHHHHHHHCC
Confidence 99853 3344444599999999998754211 10 000 00111111222221111 1 167889999999999
Q ss_pred ceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 233 KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 233 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
.+.+.+...+++++++++++.+.+++..+|+++
T Consensus 287 ~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 287 KLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred CeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 998887788999999999999998887888874
No 124
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.95 E-value=2e-26 Score=190.57 Aligned_cols=210 Identities=23% Similarity=0.314 Sum_probs=175.4
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSPQLLIKILDTSVP 53 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~~p~~~~ 53 (270)
+++|+|..+|++++.|++||+|++. |+|++|+++++++ ++++ |++
T Consensus 62 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~-- 137 (306)
T cd08258 62 EFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEES-LHEL-PEN-- 137 (306)
T ss_pred ceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHH-eEEC-cCC--
Confidence 4678888899999999999999873 7899999999999 9999 999
Q ss_pred ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHHhCCCcee
Q 042426 54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA--RSKEKVDLLKHKFGFDDAF 131 (270)
Q Consensus 54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~--~~~~~~~~~~~~~g~~~vi 131 (270)
++++.++++..++++|+++...++++++++|+|.| +|++|++++|+|+.+|++|++++ +++++.+.++ ++|++++
T Consensus 138 ~~~~~aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~- 214 (306)
T cd08258 138 LSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV- 214 (306)
T ss_pred CCHHHHHhhchHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-
Confidence 56544458888999999998889999999999976 69999999999999999988773 3455777777 8999877
Q ss_pred ecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426 132 NYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF 209 (270)
Q Consensus 132 ~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (270)
++... ++.+.+.+..++ ++|+++||+|+ ..+...+++|+++|+++.+|.... ....++...++.+++++.|+
T Consensus 215 ~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~i~g~ 288 (306)
T cd08258 215 NGGEE-DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----LAASIDVERIIQKELSVIGS 288 (306)
T ss_pred CCCcC-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----CCcccCHHHHhhcCcEEEEE
Confidence 77776 888888887765 89999999975 588899999999999999988652 22345667777899999999
Q ss_pred cccCcccchHHHHHHHHHHHHCC
Q 042426 210 LAGDFYHQYPKFLELVMLAIKEG 232 (270)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~g 232 (270)
+.+. .++++++++++++|
T Consensus 289 ~~~~-----~~~~~~~~~~~~~~ 306 (306)
T cd08258 289 RSST-----PASWETALRLLASG 306 (306)
T ss_pred ecCc-----hHhHHHHHHHHhcC
Confidence 8865 46688888888765
No 125
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.95 E-value=2.3e-26 Score=190.30 Aligned_cols=237 Identities=24% Similarity=0.369 Sum_probs=194.7
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS 77 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~ 77 (270)
+++|.|..+|++++++++||+|+++ |++++|+.++++. ++++ |++ ++. .++.++..+.++|+++.....
T Consensus 66 e~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~ 141 (309)
T cd05289 66 DVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADE-LALK-PAN--LSFEEAAALPLAGLTAWQALFELGG 141 (309)
T ss_pred ceeEEEEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHH-hccC-CCC--CCHHHHHhhhHHHHHHHHHHHhhcC
Confidence 4568888899999999999999985 7999999999999 9999 988 444 477888899999999988778
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
+.++++++|+|++|++|++++++++..|++|+++++++ +.+.++ ++|.+++++.... ++.. ....+++|+++||
T Consensus 142 ~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~---~~~~~~~d~v~~~ 215 (309)
T cd05289 142 LKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER---AAAPGGVDAVLDT 215 (309)
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh---ccCCCCceEEEEC
Confidence 99999999999999999999999999999999999777 778886 8998778877665 4443 2222379999999
Q ss_pred CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeee
Q 042426 158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV 237 (270)
Q Consensus 158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 237 (270)
+++.....++++++++|+++.+|.... .. . ..+.+++++........ .+.+.++.+++.++.+.+.
T Consensus 216 ~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~--~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 281 (309)
T cd05289 216 VGGETLARSLALVKPGGRLVSIAGPPP-----AE--Q---AAKRRGVRAGFVFVEPD----GEQLAELAELVEAGKLRPV 281 (309)
T ss_pred CchHHHHHHHHHHhcCcEEEEEcCCCc-----ch--h---hhhhccceEEEEEeccc----HHHHHHHHHHHHCCCEEEe
Confidence 999888999999999999999987431 10 0 33445566555544221 5778899999999999887
Q ss_pred eeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 238 EDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 238 ~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
+...|++++++++++.+.+++..+|+++
T Consensus 282 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 282 VDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred eccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 7788999999999999998887888874
No 126
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.95 E-value=1.8e-25 Score=181.65 Aligned_cols=207 Identities=30% Similarity=0.400 Sum_probs=170.2
Q ss_pred cccceEEEEeecCCCCCCCCCEEEec--------------------------ccceeeEeecCCccceeccCCCCCccc-
Q 042426 4 LSGYGVSKVLDSTHPNYKKDDLVWGL--------------------------TSWEEFSLIQSPQLLIKILDTSVPLPY- 56 (270)
Q Consensus 4 i~g~g~v~~vG~~v~~~~~Gd~V~~~--------------------------g~~~~~~~v~~~~~~~~~~p~~~~~~~- 56 (270)
.+++|+|.++|++++.|++||+|+++ |++++|+.++++. ++++ |++ ++.
T Consensus 35 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~ 110 (271)
T cd05188 35 HEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADN-LVPL-PDG--LSLE 110 (271)
T ss_pred cccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCEeccccCCcceEEEEechHH-eEEC-CCC--CCHH
Confidence 35778999999999999999999873 6899999999999 9999 988 555
Q ss_pred cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCc
Q 042426 57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEE 136 (270)
Q Consensus 57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 136 (270)
+++.++.++.+||+++.....++++++|+|+|+++ +|++++++++..|.+|+++++++++.+.++ ++|.++++++.+.
T Consensus 111 ~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 188 (271)
T cd05188 111 EAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE 188 (271)
T ss_pred HhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC
Confidence 48888899999999998888779999999999866 999999999999999999999999999997 8898888887776
Q ss_pred hhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc
Q 042426 137 PDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF 214 (270)
Q Consensus 137 ~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (270)
++.+.+. ...+ ++|+++|+++. .....++++++++|+++.++..... .........+.+++++.++....
T Consensus 189 -~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~- 260 (271)
T cd05188 189 -DLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGG-----PPLDDLRRLLFKELTIIGSTGGT- 260 (271)
T ss_pred -CHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCC-----CCcccHHHHHhcceEEEEeecCC-
Confidence 6666665 4444 89999999998 7889999999999999999875532 11122445677889998887654
Q ss_pred ccchHHHHHHHHHH
Q 042426 215 YHQYPKFLELVMLA 228 (270)
Q Consensus 215 ~~~~~~~~~~~~~~ 228 (270)
.+.+++++++
T Consensus 261 ----~~~~~~~~~~ 270 (271)
T cd05188 261 ----REDFEEALDL 270 (271)
T ss_pred ----HHHHHHHHhh
Confidence 2345555443
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.83 E-value=2.4e-19 Score=129.56 Aligned_cols=127 Identities=28% Similarity=0.471 Sum_probs=114.2
Q ss_pred hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC-cchHHHHHHc
Q 042426 92 AVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG-GKMLDAVLLN 169 (270)
Q Consensus 92 ~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g-~~~~~~~~~~ 169 (270)
++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++. ++.+++++.+++ ++|++|||+| ...++.++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~ 78 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL 78 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence 6899999999999999999999999999999 9999999999998 899999999998 9999999999 5799999999
Q ss_pred cccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHH
Q 042426 170 MRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIK 230 (270)
Q Consensus 170 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (270)
++++|+++.+|... ......+...++.+++++.+++..+ ++.++++++++.
T Consensus 79 l~~~G~~v~vg~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la 129 (130)
T PF00107_consen 79 LRPGGRIVVVGVYG-----GDPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA 129 (130)
T ss_dssp EEEEEEEEEESSTS-----TSEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred hccCCEEEEEEccC-----CCCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence 99999999999965 2445678889999999999999876 566777777664
No 128
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.67 E-value=1e-16 Score=115.34 Aligned_cols=122 Identities=25% Similarity=0.288 Sum_probs=81.4
Q ss_pred hCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC--cch-HHHHHHccccCCEEEEEcccccccccCCCCccchHHHHh
Q 042426 125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG--GKM-LDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVG 201 (270)
Q Consensus 125 ~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g--~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 201 (270)
+|+++++||++. ++ ..++++|+|||++| ++. +..++++| ++|+++.++. . ........
T Consensus 1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~----------~~~~~~~~ 61 (127)
T PF13602_consen 1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-D----------LPSFARRL 61 (127)
T ss_dssp CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-H----------HHHHHHHH
T ss_pred CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-c----------ccchhhhh
Confidence 589999999976 66 33448999999999 543 37777888 9999999864 0 11111112
Q ss_pred hcceeeeccccCcc--cchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426 202 KRICMEGFLAGDFY--HQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265 (270)
Q Consensus 202 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 265 (270)
+...+......... ....+.++++.+++++|+++|.+.++||++++++|++.+++++..||+||
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 22333333222110 12456799999999999999999999999999999999999999999996
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.45 E-value=3e-12 Score=108.16 Aligned_cols=175 Identities=12% Similarity=0.099 Sum_probs=128.4
Q ss_pred HHHHhhhhcC-CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhH
Q 042426 68 AYGGLHELCS-PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRC 146 (270)
Q Consensus 68 a~~~l~~~~~-~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~ 146 (270)
.|..+.+..+ .-+|++|+|.|+ |.+|+.+++.++.+|++|+++..++.+.+.++ ++|++. ++ ..+.+
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~-~~------~~e~v--- 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEV-MT------MEEAV--- 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEE-cc------HHHHH---
Confidence 3444434333 357999999997 99999999999999999999999999999888 888842 21 22222
Q ss_pred cCCCccEEEeCCCcc-hHHHH-HHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHH-
Q 042426 147 FPEGIDIYFENVGGK-MLDAV-LLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLE- 223 (270)
Q Consensus 147 ~~~~~d~v~d~~g~~-~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 223 (270)
.++|+||+|+|.. .+... +..++++|+++.+|.. ...++...+..+++++.+...... ...++
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~~~ 321 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYELPD 321 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEcCC
Confidence 2489999999975 56655 9999999999999862 123667777778888887766431 11234
Q ss_pred -HHHHHHHCCce---eeeeeee-----cCcc-cHHHHHHHHhcCCc-cceEEEEec
Q 042426 224 -LVMLAIKEGKL---VYVEDIA-----EGLE-KAPSALVGIFTGQN-VGKQLVAVA 268 (270)
Q Consensus 224 -~~~~~~~~g~~---~~~~~~~-----~~~~-~~~~a~~~~~~~~~-~gk~vv~~~ 268 (270)
+.+.++.+|++ .+.+... ++|+ ++.++++.+.++.. ..|+++.+.
T Consensus 322 g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 322 GRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred cchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 68899999988 3334444 6788 99999999988653 357776553
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.43 E-value=5.8e-12 Score=109.03 Aligned_cols=149 Identities=14% Similarity=0.060 Sum_probs=107.1
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCc------------hhHHHHHH
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEE------------PDLDAALN 144 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~------------~~~~~~i~ 144 (270)
..++++|+|+|+ |.+|+++++.|+.+|++|++++.++++++.++ ++|++.+ ++..+. .++.+...
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 457899999998 99999999999999999999999999999998 8999843 554331 02323333
Q ss_pred hH-cC--CCccEEEeCCCcc------h-HHHHHHccccCCEEEEEcccccccccCCCCccchHHHHh-hcceeeeccccC
Q 042426 145 RC-FP--EGIDIYFENVGGK------M-LDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVG-KRICMEGFLAGD 213 (270)
Q Consensus 145 ~~-~~--~~~d~v~d~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 213 (270)
+. .+ +++|++|+|++.+ . .+.+++.++++|+++.++...+.+.+. ..+...++. +++++.|.+...
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~---t~~~~~v~~~~gVti~Gv~n~P 316 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCEL---TVPGEVVVTDNGVTIIGYTDLP 316 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCccc---ccCccceEeECCEEEEEeCCCc
Confidence 32 22 2699999999963 3 499999999999999998853221111 122234454 788888876322
Q ss_pred cccchHHHHHHHHHHHHCCceee
Q 042426 214 FYHQYPKFLELVMLAIKEGKLVY 236 (270)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~g~~~~ 236 (270)
.++..+..+++.++.+..
T Consensus 317 -----~~~p~~As~lla~~~i~l 334 (509)
T PRK09424 317 -----SRLPTQSSQLYGTNLVNL 334 (509)
T ss_pred -----hhHHHHHHHHHHhCCccH
Confidence 344556888888887754
No 131
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.83 E-value=5.4e-07 Score=73.19 Aligned_cols=236 Identities=16% Similarity=0.165 Sum_probs=134.2
Q ss_pred CcccceEEEEeecCCCCCCCCCEEEec---cc---------------------------ceeeEeecCCccceeccCCCC
Q 042426 3 PLSGYGVSKVLDSTHPNYKKDDLVWGL---TS---------------------------WEEFSLIQSPQLLIKILDTSV 52 (270)
Q Consensus 3 ~i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~---------------------------~~~~~~v~~~~~~~~~~p~~~ 52 (270)
.||..|....+.|+++++.+|.||+|+ ++ |-+|.++..+. .+. |+.
T Consensus 32 ~vPvWGfA~VveS~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~-~y~--~~~- 107 (314)
T PF11017_consen 32 IVPVWGFATVVESRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADP-AYD--PER- 107 (314)
T ss_pred ccccceEEEEEeeCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCc-ccC--cch-
Confidence 377788888899999999999999998 22 22232222222 111 111
Q ss_pred CccccccccCchhhhHHHHhhhhc--CCCCCcEEEEecCCchHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHHhCC-
Q 042426 53 PLPYYTGILGMPGLTAYGGLHELC--SPKKGEYVYVSAASGAVGQLVGQFVK--LVGCYVVGSARSKEKVDLLKHKFGF- 127 (270)
Q Consensus 53 ~~~~~~a~l~~~~~ta~~~l~~~~--~~~~g~~vlI~ga~g~vG~~ai~la~--~~g~~v~~~~~~~~~~~~~~~~~g~- 127 (270)
....+.+--.+.|+|.+-..+. ..-..+.|+|.+|++-+++.++.+++ .-+.+++.++ |..+..+.+ .+|.
T Consensus 108 --e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve-~lg~Y 183 (314)
T PF11017_consen 108 --EDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVE-SLGCY 183 (314)
T ss_pred --hHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhh-ccCCc
Confidence 1012333334556664422211 12234689999999999999999888 3345999999 778888888 8887
Q ss_pred CceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCC-EEEEEcccccccccC-------CCCccchHH
Q 042426 128 DDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICG-HIAVCGMISQYNIEK-------PEGVHNLMQ 198 (270)
Q Consensus 128 ~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G-~~v~~g~~~~~~~~~-------~~~~~~~~~ 198 (270)
+.|+.|.+ |.++.....-+++|+.|+. .....-..+...= ..+.+|..+...... ....++...
T Consensus 184 d~V~~Yd~-------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~ 256 (314)
T PF11017_consen 184 DEVLTYDD-------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPD 256 (314)
T ss_pred eEEeehhh-------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChH
Confidence 67877754 3333333467999999985 4445555555542 455666655432211 111122222
Q ss_pred HHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee-eeeeecCcccHHHHHHHHhcCCc
Q 042426 199 VVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY-VEDIAEGLEKAPSALVGIFTGQN 259 (270)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~~~~ 259 (270)
...+.+.-.|... +.....+.+.++.+.. ..- .+...-+.+.++++++.+.+++.
T Consensus 257 ~~~kr~~~~G~~~--~~~r~~~aw~~f~~~~----~~wl~~~~~~G~ea~~~~y~~l~~G~v 312 (314)
T PF11017_consen 257 QIDKRIKEWGAAE--FFQRMAAAWKRFAADA----QPWLKVEEVAGPEAVEAAYQDLLAGKV 312 (314)
T ss_pred HHHHHHHHhCHHH--HHHHHHHHHHHHHHhh----cCcEEEEEecCHHHHHHHHHHHhcCCC
Confidence 2333322222211 1112223333333322 222 23345699999999999988763
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.69 E-value=2.3e-07 Score=80.55 Aligned_cols=103 Identities=19% Similarity=0.218 Sum_probs=79.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCc------------hhHHHHHHhH
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEE------------PDLDAALNRC 146 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~------------~~~~~~i~~~ 146 (270)
++++++|+|+ |.+|+++++.++.+|++|+++++++++.+.++ ++|++. .++..+. .++.+...+.
T Consensus 163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 5689999998 99999999999999999999999999999998 799864 2332110 1333333333
Q ss_pred cC---CCccEEEeCC---Cc--c--hHHHHHHccccCCEEEEEccccc
Q 042426 147 FP---EGIDIYFENV---GG--K--MLDAVLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 147 ~~---~~~d~v~d~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~ 184 (270)
.. .++|++|+|+ |. + ..+..++.+++++.++.++...+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence 32 2699999999 54 2 57888999999999998877544
No 133
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.58 E-value=4.8e-07 Score=70.21 Aligned_cols=80 Identities=26% Similarity=0.402 Sum_probs=65.4
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----CceeecCCchhHHHHHHhHcCC--CccEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF----DDAFNYKEEPDLDAALNRCFPE--GIDIY 154 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~~--~~d~v 154 (270)
+..++|+||++|+|.+.++.+...|++|+.+.|+.++++.+.++++. ...+|-++..+....+...... .+|++
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiL 85 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDIL 85 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEE
Confidence 47899999999999999999999999999999999999999989993 2456766653555555544443 69999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
++.+|-
T Consensus 86 vNNAGl 91 (246)
T COG4221 86 VNNAGL 91 (246)
T ss_pred EecCCC
Confidence 999983
No 134
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.55 E-value=1.4e-06 Score=70.94 Aligned_cols=171 Identities=16% Similarity=0.194 Sum_probs=100.9
Q ss_pred hcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCC
Q 042426 75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPE 149 (270)
Q Consensus 75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~ 149 (270)
.+.+++|++||.+|. |+ |..++++++..|. +|++++.+++..+.+++. .+...+ ..... ++.+ + ...++
T Consensus 72 ~~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-EIEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-chhh-C-CCCCC
Confidence 356889999999985 55 8888888887765 799999999988888732 333322 22212 2211 1 11123
Q ss_pred CccEEEeCCC-----c--chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHH
Q 042426 150 GIDIYFENVG-----G--KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFL 222 (270)
Q Consensus 150 ~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (270)
.||+|+.... . ..+..+.+.|+|+|+++..+.... .. .+ ....+...+.+....... ..
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~-----~~--~~--~~~~~~~~~~~~~~~~~~-----~~ 211 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLR-----GE--LP--EEIRNDAELYAGCVAGAL-----QE 211 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeecc-----CC--CC--HHHHHhHHHHhccccCCC-----CH
Confidence 7999985432 1 378999999999999998766432 11 11 112222222222111110 12
Q ss_pred HHHHHHHHC-Cc--eeeeeeeecCcccHHHHHHHH--hcCCccceEEE
Q 042426 223 ELVMLAIKE-GK--LVYVEDIAEGLEKAPSALVGI--FTGQNVGKQLV 265 (270)
Q Consensus 223 ~~~~~~~~~-g~--~~~~~~~~~~~~~~~~a~~~~--~~~~~~gk~vv 265 (270)
.++.+++.+ |. +.......+++++..++++.+ .+++..++.+.
T Consensus 212 ~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 259 (272)
T PRK11873 212 EEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV 259 (272)
T ss_pred HHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence 344455554 32 233344567889999999988 55554555544
No 135
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.47 E-value=5.1e-06 Score=70.39 Aligned_cols=99 Identities=16% Similarity=0.206 Sum_probs=72.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC--
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV-- 158 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~-- 158 (270)
+.+++|+|+ |.+|+.+++.++.+|++|+++.+++++.+.+.+.++......+.+..++.+.+. .+|++++|+
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVLI 240 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEcccc
Confidence 346999997 999999999999999999999999888887764666532222222213333332 489999998
Q ss_pred -Cc--c--hHHHHHHccccCCEEEEEcccccc
Q 042426 159 -GG--K--MLDAVLLNMRICGHIAVCGMISQY 185 (270)
Q Consensus 159 -g~--~--~~~~~~~~l~~~G~~v~~g~~~~~ 185 (270)
+. + .....++.+++++.++.++...+.
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG 272 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGG 272 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCC
Confidence 32 2 247788889999999998875443
No 136
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.45 E-value=4.1e-06 Score=71.53 Aligned_cols=103 Identities=19% Similarity=0.228 Sum_probs=77.4
Q ss_pred hHHHHhhhhcCCC-CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHh
Q 042426 67 TAYGGLHELCSPK-KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNR 145 (270)
Q Consensus 67 ta~~~l~~~~~~~-~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~ 145 (270)
..|.++.+..++. .|++++|.|. |.+|+.+++.++.+|++|+++.+++.+...+. ..|+. +. ++.+.+.
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal~- 266 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAAE- 266 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHHh-
Confidence 3455554443444 7999999997 99999999999999999999998887766665 55654 22 2222222
Q ss_pred HcCCCccEEEeCCCcc-hHH-HHHHccccCCEEEEEcccc
Q 042426 146 CFPEGIDIYFENVGGK-MLD-AVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 146 ~~~~~~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 183 (270)
++|++++++|.. .+. ..+..+++++.++.+|..+
T Consensus 267 ----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 267 ----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred ----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 489999999975 454 6888999999999998754
No 137
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=98.42 E-value=2.6e-07 Score=64.24 Aligned_cols=42 Identities=19% Similarity=0.359 Sum_probs=33.5
Q ss_pred ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceec
Q 042426 5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKI 47 (270)
Q Consensus 5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~ 47 (270)
+++|+|.++|+++++|++||+|+.. |+|+||+++++++ ++|+
T Consensus 38 E~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~v 109 (109)
T PF08240_consen 38 EGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEVLGLGLDGGFAEYVVVPARN-LVPV 109 (109)
T ss_dssp EEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEETTTSSTCSSBSEEEEEGGG-EEEE
T ss_pred ceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCEeEcCCCCcccCeEEEehHH-EEEC
Confidence 4566777789999999999999652 7889999998888 8764
No 138
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.39 E-value=2.8e-06 Score=63.99 Aligned_cols=78 Identities=15% Similarity=0.323 Sum_probs=60.6
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeecCCch---hHHHHHHhHcCCCccEEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--DDAFNYKEEP---DLDAALNRCFPEGIDIYF 155 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~---~~~~~i~~~~~~~~d~v~ 155 (270)
|.+|||+||++|+|+..++-...+|-+|++..|++++++.++..... ..+.|..+.+ .+.+.+.+..+ ..++++
T Consensus 5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvli 83 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVLI 83 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chheee
Confidence 67999999999999999999999999999999999999999844432 2344554431 25555555544 478999
Q ss_pred eCCC
Q 042426 156 ENVG 159 (270)
Q Consensus 156 d~~g 159 (270)
+++|
T Consensus 84 NNAG 87 (245)
T COG3967 84 NNAG 87 (245)
T ss_pred eccc
Confidence 9988
No 139
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.36 E-value=9.6e-06 Score=68.89 Aligned_cols=92 Identities=20% Similarity=0.211 Sum_probs=71.8
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
..+|++|+|.|. |.+|+.+++.++.+|++|+++..++.+...+. ..|+. +. +..+.+. +.|++|++
T Consensus 192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~------~leeal~-----~aDVVIta 257 (406)
T TIGR00936 192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VM------TMEEAAK-----IGDIFITA 257 (406)
T ss_pred CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eC------CHHHHHh-----cCCEEEEC
Confidence 367999999997 99999999999999999999988887766666 66763 22 2222232 37999999
Q ss_pred CCcc-hHH-HHHHccccCCEEEEEcccc
Q 042426 158 VGGK-MLD-AVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 158 ~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 183 (270)
+|.. .+. ..+..+++++.++.+|..+
T Consensus 258 TG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 258 TGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred CCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 9985 454 4888999999999988743
No 140
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.36 E-value=3.9e-06 Score=66.91 Aligned_cols=82 Identities=18% Similarity=0.248 Sum_probs=61.6
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-------ceeecCCchhHHHHHHhHcC-C-
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-------DAFNYKEEPDLDAALNRCFP-E- 149 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-------~vi~~~~~~~~~~~i~~~~~-~- 149 (270)
..+.+++|+|||+|+|...+..+...|.+++.+.|+.++++.+.+++.-. ..+|..+.++......+... +
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 45679999999999999999999999999999999999998887666532 23466665233332322222 2
Q ss_pred CccEEEeCCCc
Q 042426 150 GIDIYFENVGG 160 (270)
Q Consensus 150 ~~d~v~d~~g~ 160 (270)
.+|+.++++|-
T Consensus 84 ~IdvLVNNAG~ 94 (265)
T COG0300 84 PIDVLVNNAGF 94 (265)
T ss_pred cccEEEECCCc
Confidence 69999999983
No 141
>PLN02494 adenosylhomocysteinase
Probab=98.35 E-value=8.5e-06 Score=69.94 Aligned_cols=100 Identities=17% Similarity=0.225 Sum_probs=75.8
Q ss_pred HHHhhhhcCC-CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHc
Q 042426 69 YGGLHELCSP-KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF 147 (270)
Q Consensus 69 ~~~l~~~~~~-~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~ 147 (270)
+.++.+..++ -.|++++|.|. |.+|+.+++.++.+|++|+++.+++.+...+. ..|.. ++ +..+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~-vv------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQ-VL------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCe-ec------cHHHHHh---
Confidence 3344333333 56899999997 99999999999999999999998877665665 56664 22 2233333
Q ss_pred CCCccEEEeCCCcc-h-HHHHHHccccCCEEEEEccc
Q 042426 148 PEGIDIYFENVGGK-M-LDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 148 ~~~~d~v~d~~g~~-~-~~~~~~~l~~~G~~v~~g~~ 182 (270)
..|+++++.|.. . ....++.|++++.++.+|..
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 289999999975 3 48899999999999999874
No 142
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.32 E-value=2.4e-05 Score=64.33 Aligned_cols=93 Identities=23% Similarity=0.327 Sum_probs=72.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.+.+++|+|. |.+|+.+++.++.+|++|++..+++++.+.++ ++|... +.+ . ++.+.+. ++|+||+|++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~-~~~--~-~l~~~l~-----~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSP-FHL--S-ELAEEVG-----KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCee-ecH--H-HHHHHhC-----CCCEEEECCC
Confidence 5789999997 99999999999999999999999988888777 777642 221 1 3333332 3999999987
Q ss_pred cc-hHHHHHHccccCCEEEEEcccc
Q 042426 160 GK-MLDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 160 ~~-~~~~~~~~l~~~G~~v~~g~~~ 183 (270)
.. .....++.+++++.++.++..+
T Consensus 220 ~~~i~~~~l~~~~~g~vIIDla~~p 244 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALIIDLASKP 244 (296)
T ss_pred hhhhhHHHHHcCCCCcEEEEEccCC
Confidence 65 3456778899999999887744
No 143
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.25 E-value=1.9e-05 Score=62.87 Aligned_cols=104 Identities=20% Similarity=0.225 Sum_probs=70.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Cce--eecCCchhHHHHHHhHc--CCCcc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---DDA--FNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v--i~~~~~~~~~~~i~~~~--~~~~d 152 (270)
.+.+++|+|++|++|..+++.+...|++|+++++++++.+.+.++... .+. .|..+.....+.+.+.. .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 357999999999999999999999999999999998887766434322 111 24444323333332221 13589
Q ss_pred EEEeCCCcc------------------------hHHHHHHccccCCEEEEEcccc
Q 042426 153 IYFENVGGK------------------------MLDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 153 ~v~d~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~ 183 (270)
.++.+.+.. .++..+.+++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 999988731 1344555667788999887653
No 144
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.24 E-value=2.4e-05 Score=62.80 Aligned_cols=143 Identities=17% Similarity=0.261 Sum_probs=93.0
Q ss_pred CCCCCCCCEEEecccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHH
Q 042426 17 HPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQL 96 (270)
Q Consensus 17 v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ 96 (270)
.+.+++||+++...+|.+|.. +... ++++ +++ +++..+..+.... ....+.. .+.++.+||-.|. | .|..
T Consensus 64 ~~p~~~g~~~~i~p~~~~~~~-~~~~-~i~i-~p~--~afgtg~h~tt~~-~l~~l~~--~~~~~~~VLDiGc-G-sG~l 133 (250)
T PRK00517 64 FHPIRIGDRLWIVPSWEDPPD-PDEI-NIEL-DPG--MAFGTGTHPTTRL-CLEALEK--LVLPGKTVLDVGC-G-SGIL 133 (250)
T ss_pred CCCEEEcCCEEEECCCcCCCC-CCeE-EEEE-CCC--CccCCCCCHHHHH-HHHHHHh--hcCCCCEEEEeCC-c-HHHH
Confidence 556789999988888988855 6677 8888 666 5554333332222 1222221 2567899999984 4 4877
Q ss_pred HHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCce---eecCCchhHHHHHHhHcCCCccEEEeCCCcc----hHHHHHH
Q 042426 97 VGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDA---FNYKEEPDLDAALNRCFPEGIDIYFENVGGK----MLDAVLL 168 (270)
Q Consensus 97 ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v---i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~----~~~~~~~ 168 (270)
++.+++ .|+ +|++++.++...+.+++......+ +..... + ..||+|+...... .+..+.+
T Consensus 134 ~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~-~----------~~fD~Vvani~~~~~~~l~~~~~~ 201 (250)
T PRK00517 134 AIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQG-D----------LKADVIVANILANPLLELAPDLAR 201 (250)
T ss_pred HHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccC-C----------CCcCEEEEcCcHHHHHHHHHHHHH
Confidence 776555 566 699999999888877733322111 111110 0 0499998766543 5677888
Q ss_pred ccccCCEEEEEcc
Q 042426 169 NMRICGHIAVCGM 181 (270)
Q Consensus 169 ~l~~~G~~v~~g~ 181 (270)
.|+++|+++..|.
T Consensus 202 ~LkpgG~lilsgi 214 (250)
T PRK00517 202 LLKPGGRLILSGI 214 (250)
T ss_pred hcCCCcEEEEEEC
Confidence 9999999998765
No 145
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.18 E-value=5.3e-05 Score=61.83 Aligned_cols=79 Identities=19% Similarity=0.331 Sum_probs=58.5
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHh---HcCCCccEEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNR---CFPEGIDIYF 155 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~---~~~~~~d~v~ 155 (270)
.+.+++|+||+|++|..+++.+...|++|+++++++++.+.+. ..+... ..|..+..++...+.+ ...+.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 3568999999999999999999889999999999988888776 445432 2455554233333333 2334789999
Q ss_pred eCCC
Q 042426 156 ENVG 159 (270)
Q Consensus 156 d~~g 159 (270)
+++|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9986
No 146
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.17 E-value=1.8e-05 Score=57.20 Aligned_cols=93 Identities=24% Similarity=0.314 Sum_probs=64.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFE 156 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d 156 (270)
++.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.. ..+++. ++.+.+.+ +|++++
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~---~~~~~~~~-----~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE---DLEEALQE-----ADIVIN 81 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG---GHCHHHHT-----ESEEEE
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH---HHHHHHhh-----CCeEEE
Confidence 4689999998 9999999999999999 5999999999988888677432 233443 33333333 999999
Q ss_pred CCCcch---HHHHHHccccC-CEEEEEcc
Q 042426 157 NVGGKM---LDAVLLNMRIC-GHIAVCGM 181 (270)
Q Consensus 157 ~~g~~~---~~~~~~~l~~~-G~~v~~g~ 181 (270)
|++... ....+....+. +.++.++.
T Consensus 82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 82 ATPSGMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp -SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred ecCCCCcccCHHHHHHHHhhhhceecccc
Confidence 998642 23333333322 56777765
No 147
>PRK12742 oxidoreductase; Provisional
Probab=98.16 E-value=4.9e-05 Score=60.38 Aligned_cols=101 Identities=19% Similarity=0.199 Sum_probs=67.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENV 158 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~ 158 (270)
+.+++|+|++|++|..+++.+...|++|+.+.+ ++++.+.+.++.+... ..|..+...+.+.+.+. +++|++++++
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~a 83 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVNA 83 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEECC
Confidence 578999999999999999999999999988765 4555555543556542 23444432333444332 3589999998
Q ss_pred Ccc----h----------------------HHHHHHccccCCEEEEEcccc
Q 042426 159 GGK----M----------------------LDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 159 g~~----~----------------------~~~~~~~l~~~G~~v~~g~~~ 183 (270)
|.. . ....+..++.+|+++.++...
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 741 0 123334456678999887644
No 148
>PRK08324 short chain dehydrogenase; Validated
Probab=98.16 E-value=2.4e-05 Score=71.96 Aligned_cols=105 Identities=21% Similarity=0.280 Sum_probs=73.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--D---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
+|.+++|+||+|++|+.+++.+...|++|++++++.++.+.+.++++. . ...|..+..+..+.+.+.. .+++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999999998887766645543 1 2235555423333333322 23699
Q ss_pred EEEeCCCcc--------------------------hHHHHHHcccc---CCEEEEEccccc
Q 042426 153 IYFENVGGK--------------------------MLDAVLLNMRI---CGHIAVCGMISQ 184 (270)
Q Consensus 153 ~v~d~~g~~--------------------------~~~~~~~~l~~---~G~~v~~g~~~~ 184 (270)
++|+++|.. .++.+++.+++ +|+++.+++...
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~ 561 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA 561 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence 999999821 13344555555 589998887543
No 149
>PRK06182 short chain dehydrogenase; Validated
Probab=98.14 E-value=4.6e-05 Score=62.05 Aligned_cols=79 Identities=24% Similarity=0.390 Sum_probs=58.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEeC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFEN 157 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d~ 157 (270)
+.+++|+|++|++|..+++.+...|++|+++++++++.+.+. ..+.. ...|..+.+++.+.+.+.. .+++|+++++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 568999999999999999999889999999999988877665 44443 2346655534444444332 2379999999
Q ss_pred CCc
Q 042426 158 VGG 160 (270)
Q Consensus 158 ~g~ 160 (270)
+|.
T Consensus 82 ag~ 84 (273)
T PRK06182 82 AGY 84 (273)
T ss_pred CCc
Confidence 983
No 150
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.14 E-value=4.8e-05 Score=61.99 Aligned_cols=77 Identities=23% Similarity=0.390 Sum_probs=57.2
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHc--CCCccEEEeCC
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCF--PEGIDIYFENV 158 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~--~~~~d~v~d~~ 158 (270)
.+++|+||+|++|..+++.+...|++|++++++.++.+.+. ..+... ..|..+.+++.+.+.+.. .+++|+++++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 36999999999999999999989999999999988877766 445432 246665534444444332 23699999999
Q ss_pred C
Q 042426 159 G 159 (270)
Q Consensus 159 g 159 (270)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 8
No 151
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.12 E-value=5.9e-05 Score=60.98 Aligned_cols=81 Identities=14% Similarity=0.161 Sum_probs=57.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY 154 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v 154 (270)
.+.+++|+|+++++|..+++.+...|++|++++++.++.+.+.++++.. ...|..+.+++.+.+.+.. .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3578999999999999999999889999999999988776665465532 1235555433444333322 1368999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
+.+.|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 999873
No 152
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.10 E-value=3.8e-05 Score=63.69 Aligned_cols=107 Identities=22% Similarity=0.257 Sum_probs=72.2
Q ss_pred ceeccCCCCCccccccccCchhhhHHHHhhhhcCC---CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 042426 44 LIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSP---KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVD 119 (270)
Q Consensus 44 ~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~---~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~ 119 (270)
.+++ |+. ...+.+....+..+++.++...... .++.+|+|+|+ |.+|..+++.++..|+ +|+++.+++++.+
T Consensus 141 a~~~-~k~--vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 141 AIKV-GKR--VRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHH-HHH--HhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 6666 666 4434444444556666665332211 36899999997 9999999999988776 8999999988765
Q ss_pred HHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcchH
Q 042426 120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKML 163 (270)
Q Consensus 120 ~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~ 163 (270)
.+.+++|.. +++.. ++.+.+. .+|+||.|++.+..
T Consensus 217 ~la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCch
Confidence 555488873 33321 3333333 38999999998644
No 153
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.04 E-value=0.00029 Score=56.86 Aligned_cols=106 Identities=21% Similarity=0.324 Sum_probs=73.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-e----eecCCchhHHHHHHhHc--CC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD-A----FNYKEEPDLDAALNRCF--PE 149 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v----i~~~~~~~~~~~i~~~~--~~ 149 (270)
.+..|+|+|||+|+|.+.+.-....|++++.+.+..++++.+.++ .+... + .|-.+.++..+.+.+.. -|
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 367899999999999998888888899999999888877777323 33322 2 34455434444443322 24
Q ss_pred CccEEEeCCCcc--------------------------hHHHHHHccccC--CEEEEEcccccc
Q 042426 150 GIDIYFENVGGK--------------------------MLDAVLLNMRIC--GHIAVCGMISQY 185 (270)
Q Consensus 150 ~~d~v~d~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~ 185 (270)
++|+.++.+|-. ....++..|++. |++|.+++..+.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 799999998831 135567777654 999999886653
No 154
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=98.00 E-value=4.6e-05 Score=53.03 Aligned_cols=94 Identities=19% Similarity=0.300 Sum_probs=66.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCccEEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVK-LVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGIDIYF 155 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~-~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~ 155 (270)
|+.+||-.| +|.|..++.+++ ..+++|+++..+++-.+.+++.. +...-+..... ++ .......++||+|+
T Consensus 1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~--~~~~~~~~~~D~v~ 75 (112)
T PF12847_consen 1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA--EFDPDFLEPFDLVI 75 (112)
T ss_dssp TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC--HGGTTTSSCEEEEE
T ss_pred CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc--ccCcccCCCCCEEE
Confidence 578999998 677999999998 57889999999999888888655 33222222222 33 11112223699999
Q ss_pred eCC-Cc----c------hHHHHHHccccCCEEEE
Q 042426 156 ENV-GG----K------MLDAVLLNMRICGHIAV 178 (270)
Q Consensus 156 d~~-g~----~------~~~~~~~~l~~~G~~v~ 178 (270)
... .. . .++...+.|+|+|+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 877 22 1 27888999999999875
No 155
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.00 E-value=6.1e-05 Score=62.12 Aligned_cols=81 Identities=20% Similarity=0.266 Sum_probs=59.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ce--eecCCchhHHHHHHhHcC--CCcc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DA--FNYKEEPDLDAALNRCFP--EGID 152 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~v--i~~~~~~~~~~~i~~~~~--~~~d 152 (270)
.+.+++|+|++|++|..+++.+...|++|++++++.++.+.+.++++.. .. .|..+.++..+.+.+... +++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999999999999999999999988877766566531 11 455554233333333221 3689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
++++++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999984
No 156
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.99 E-value=0.00017 Score=58.34 Aligned_cols=81 Identities=22% Similarity=0.357 Sum_probs=56.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---ceeecCCchhHHHHHHhHc-CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD---DAFNYKEEPDLDAALNRCF-PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~-~~~~ 151 (270)
.+.+++|+|+++++|.++++.+...|++|++++++.++.+.+.+++ +.. ...|..+..+..+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 3678999999999999999999999999999999888776655333 221 2235555423333333321 2468
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|++++++|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999873
No 157
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.99 E-value=0.00014 Score=61.02 Aligned_cols=81 Identities=23% Similarity=0.230 Sum_probs=56.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++ .|.. ...|..+..+..+.+.+.. -+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 356899999999999999999988999999999998876655433 3432 1235555423333333221 1369
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|++++++|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999984
No 158
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.95 E-value=0.00013 Score=62.88 Aligned_cols=92 Identities=20% Similarity=0.224 Sum_probs=71.0
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
.-.|.+++|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|+. +. ++.+.+. ..|+++.+
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~-~~------~leell~-----~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQ-VV------TLEDVVE-----TADIFVTA 316 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCce-ec------cHHHHHh-----cCCEEEEC
Confidence 446899999997 99999999999999999999987766654554 44653 21 3333333 38999999
Q ss_pred CCcc-hH-HHHHHccccCCEEEEEcccc
Q 042426 158 VGGK-ML-DAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 158 ~g~~-~~-~~~~~~l~~~G~~v~~g~~~ 183 (270)
+|.. .+ ...+..|++++.++.+|...
T Consensus 317 tGt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred CCcccccCHHHHhccCCCcEEEEcCCCc
Confidence 9875 44 48999999999999998753
No 159
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.92 E-value=0.0001 Score=59.69 Aligned_cols=80 Identities=20% Similarity=0.289 Sum_probs=57.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY 154 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v 154 (270)
++.+++|+|+++++|..+++.+...|++|+++++++++.+.+.++++.. ...|..+..+....+.+.. .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 3678999999999999999999999999999999988887776455432 1234444423333333321 2368999
Q ss_pred EeCCC
Q 042426 155 FENVG 159 (270)
Q Consensus 155 ~d~~g 159 (270)
++++|
T Consensus 85 i~~ag 89 (263)
T PRK06200 85 VGNAG 89 (263)
T ss_pred EECCC
Confidence 99987
No 160
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.92 E-value=0.0001 Score=59.29 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=57.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFE 156 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d 156 (270)
+|.+++|+||+|++|..+++.+...|++|+++++++.+.+...++++.. ...|..+.+++.+.+.+.. .+++|.++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4679999999999999999999999999999999887776665455442 2345555423333333321 136899999
Q ss_pred CCCc
Q 042426 157 NVGG 160 (270)
Q Consensus 157 ~~g~ 160 (270)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8873
No 161
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.91 E-value=0.00052 Score=52.09 Aligned_cols=89 Identities=24% Similarity=0.312 Sum_probs=65.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV 158 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~ 158 (270)
-.|.+|.|+|. |.+|+.++++++.+|++|++..++........ ..+.. +. ++.+.+.+ .|+|+.+.
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~~----~~---~l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGVE----YV---SLDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTEE----ES---SHHHHHHH------SEEEE-S
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcc-cccce----ee---ehhhhcch-----hhhhhhhh
Confidence 35889999997 99999999999999999999998877666343 44431 21 45555555 89999888
Q ss_pred Cc-c-----hHHHHHHccccCCEEEEEcc
Q 042426 159 GG-K-----MLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 159 g~-~-----~~~~~~~~l~~~G~~v~~g~ 181 (270)
.. + .-...++.|+++..+|.++.
T Consensus 100 plt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred ccccccceeeeeeeeeccccceEEEeccc
Confidence 63 2 34678889999999998866
No 162
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.89 E-value=0.00011 Score=59.87 Aligned_cols=80 Identities=15% Similarity=0.219 Sum_probs=57.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC-ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-FD-DAFNYKEEPDLDAALNRCF--PEGIDIYFE 156 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d 156 (270)
+.+++|+||+|++|..+++.+...|++|+++.+++++.+.+.+.++ .. ...|..+.+++.+.+.+.. .+++|++++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999999999999999888889999999999888776654555 22 2245555434433333322 136899999
Q ss_pred CCCc
Q 042426 157 NVGG 160 (270)
Q Consensus 157 ~~g~ 160 (270)
+.|.
T Consensus 85 ~ag~ 88 (273)
T PRK07825 85 NAGV 88 (273)
T ss_pred CCCc
Confidence 9873
No 163
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.89 E-value=0.00012 Score=61.24 Aligned_cols=80 Identities=24% Similarity=0.404 Sum_probs=57.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeecCCchhHHHHHHhH--cCCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD---AFNYKEEPDLDAALNRC--FPEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~--~~~~~ 151 (270)
.+.+++|+||++++|.++++.+...|++|+++++++++.+.+.++ .|... ..|..+.++..+.+.+. ..+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 457899999999999999999999999999999998887655433 34431 23555542333333222 12469
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|++++++|
T Consensus 86 D~lVnnAG 93 (330)
T PRK06139 86 DVWVNNVG 93 (330)
T ss_pred CEEEECCC
Confidence 99999998
No 164
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.89 E-value=0.00011 Score=55.92 Aligned_cols=92 Identities=20% Similarity=0.237 Sum_probs=64.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCCCc--
Q 042426 84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENVGG-- 160 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-- 160 (270)
|+|.||+|.+|..+++.+...|.+|++++|++++.+. ..+.+. ..|..+..++.+.+. ++|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~-----~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALK-----GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHT-----TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhh-----hcchhhhhhhhhc
Confidence 7899999999999999999999999999999887775 223331 234443312333332 49999999983
Q ss_pred ---chHHHHHHccccCC--EEEEEcccc
Q 042426 161 ---KMLDAVLLNMRICG--HIAVCGMIS 183 (270)
Q Consensus 161 ---~~~~~~~~~l~~~G--~~v~~g~~~ 183 (270)
......++.++..| +++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 24556666665544 777776544
No 165
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.88 E-value=0.00018 Score=57.36 Aligned_cols=79 Identities=24% Similarity=0.320 Sum_probs=57.5
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENV 158 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~ 158 (270)
++.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+..+.. ...|..+..+..+.+.. .+++|++|++.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence 4578999999999999999999999999999999988777666455543 22455554222332322 23689999999
Q ss_pred Cc
Q 042426 159 GG 160 (270)
Q Consensus 159 g~ 160 (270)
|.
T Consensus 86 g~ 87 (245)
T PRK07060 86 GI 87 (245)
T ss_pred CC
Confidence 73
No 166
>PRK06484 short chain dehydrogenase; Validated
Probab=97.86 E-value=0.00027 Score=63.08 Aligned_cols=105 Identities=18% Similarity=0.204 Sum_probs=73.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY 154 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v 154 (270)
.+.++||+||++++|..+++.+...|++|+++.++.++.+.+.++.+.. ...|..+.++....+.+... +.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999999999999999999999999999999988887777566543 22455554234433433321 368999
Q ss_pred EeCCCcc----h-----------------------HHHHHHccccCCEEEEEccccc
Q 042426 155 FENVGGK----M-----------------------LDAVLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 155 ~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 184 (270)
++++|.. . .+.++..+..+|+++.+++...
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 9988731 0 2334455556799998887554
No 167
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.0011 Score=53.37 Aligned_cols=81 Identities=15% Similarity=0.185 Sum_probs=54.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EG 150 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~ 150 (270)
.+.+++|+|++|++|..+++.+...|++ |+++++++++.+...++ .+.. ...|..+..++.+.+..... ++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999998 99999887665533322 2332 22355554233333333211 36
Q ss_pred ccEEEeCCCc
Q 042426 151 IDIYFENVGG 160 (270)
Q Consensus 151 ~d~v~d~~g~ 160 (270)
+|+++++.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999974
No 168
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.86 E-value=0.00013 Score=58.93 Aligned_cols=80 Identities=24% Similarity=0.294 Sum_probs=56.5
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY 154 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v 154 (270)
++.+++|+||+|++|..+++.+...|++|+++.++.++.+.+.+..+.. ...|..+..+..+.+.+... +.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3678999999999999999999889999999999888777776333321 12344443233333333221 368999
Q ss_pred EeCCC
Q 042426 155 FENVG 159 (270)
Q Consensus 155 ~d~~g 159 (270)
+++.|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99986
No 169
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00013 Score=58.87 Aligned_cols=83 Identities=14% Similarity=0.239 Sum_probs=57.4
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeecCCchhHHHHHHhHc--CCCc
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD----DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.-++.++||+||+|++|..+++.+...|++|+++.++++..+.+.++..-. ...|..+..+..+.+.+.. .+++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 346689999999999999999999999999999999887776665333221 2235555423333232221 1369
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+|+.+.|.
T Consensus 88 d~vi~~ag~ 96 (264)
T PRK12829 88 DVLVNNAGI 96 (264)
T ss_pred CEEEECCCC
Confidence 999998874
No 170
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.85 E-value=0.00028 Score=62.44 Aligned_cols=105 Identities=13% Similarity=0.235 Sum_probs=68.4
Q ss_pred hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--------CC------C-ceeecCCchhH
Q 042426 75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF--------GF------D-DAFNYKEEPDL 139 (270)
Q Consensus 75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~--------g~------~-~vi~~~~~~~~ 139 (270)
..+.+.|.+++|+||+|++|..+++.+...|++|++++|+.++.+.+.+.+ |. . ...|..+..+
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es- 152 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ- 152 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH-
Confidence 345668899999999999999999999889999999999988776543221 21 1 1124433312
Q ss_pred HHHHHhHcCCCccEEEeCCCcch----------------HHHHHHcccc--CCEEEEEccccc
Q 042426 140 DAALNRCFPEGIDIYFENVGGKM----------------LDAVLLNMRI--CGHIAVCGMISQ 184 (270)
Q Consensus 140 ~~~i~~~~~~~~d~v~d~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~~ 184 (270)
+.+.. +++|+||+++|... ....++.+.. .+++|.++....
T Consensus 153 ---I~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga 211 (576)
T PLN03209 153 ---IGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGT 211 (576)
T ss_pred ---HHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchh
Confidence 22222 35899999987421 1223333333 268998887543
No 171
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00036 Score=55.85 Aligned_cols=81 Identities=16% Similarity=0.178 Sum_probs=55.5
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
++.+++|+|++|++|+.++..+...|++|+++.+++++.+.+.+++ +.. ...|..+..+..+.+.+... +++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999889999999998887666554332 222 12355544233333322211 369
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999984
No 172
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.84 E-value=0.00034 Score=61.27 Aligned_cols=80 Identities=19% Similarity=0.247 Sum_probs=54.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS--KEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIY 154 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~--~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v 154 (270)
++.+++|+|++|++|..+++.+...|++|+++.++ .++.+.+.++++.. ...|..+.++..+.+.... .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 46899999999999999999999999999998864 23444444355543 2346665523333333221 2368999
Q ss_pred EeCCC
Q 042426 155 FENVG 159 (270)
Q Consensus 155 ~d~~g 159 (270)
|++.|
T Consensus 289 i~~AG 293 (450)
T PRK08261 289 VHNAG 293 (450)
T ss_pred EECCC
Confidence 99998
No 173
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.82 E-value=0.00011 Score=63.52 Aligned_cols=88 Identities=25% Similarity=0.340 Sum_probs=61.4
Q ss_pred hhhhHHHHhhhhcC---CCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426 64 PGLTAYGGLHELCS---PKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL 139 (270)
Q Consensus 64 ~~~ta~~~l~~~~~---~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~ 139 (270)
+..+++.++..... -.++.+|+|+|+ |.+|..+++.+...|+ +|+++.++.++.+.+.+++|.. +++. . +.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~-~~ 236 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL--D-EL 236 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--H-HH
Confidence 44555555532221 246789999997 9999999999999998 8999999988876555477753 3332 1 33
Q ss_pred HHHHHhHcCCCccEEEeCCCcc
Q 042426 140 DAALNRCFPEGIDIYFENVGGK 161 (270)
Q Consensus 140 ~~~i~~~~~~~~d~v~d~~g~~ 161 (270)
.+.+. ++|+||+|++.+
T Consensus 237 ~~~l~-----~aDvVI~aT~s~ 253 (423)
T PRK00045 237 PEALA-----EADIVISSTGAP 253 (423)
T ss_pred HHHhc-----cCCEEEECCCCC
Confidence 33332 489999999874
No 174
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.82 E-value=0.00052 Score=56.15 Aligned_cols=92 Identities=21% Similarity=0.276 Sum_probs=68.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.|.+++|+|. |.+|.++++.++.+|++|++..+++++.+.+. +.|.. .+.+ . ++.+.+. ++|+|++++.
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~-~~~~--~-~l~~~l~-----~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLI-PFPL--N-KLEEKVA-----EIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-eecH--H-HHHHHhc-----cCCEEEECCC
Confidence 4789999998 99999999999999999999999988777665 56643 2211 1 3333332 3899999997
Q ss_pred cch-HHHHHHccccCCEEEEEccc
Q 042426 160 GKM-LDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 160 ~~~-~~~~~~~l~~~G~~v~~g~~ 182 (270)
... -...++.++++..++.++..
T Consensus 219 ~~ii~~~~l~~~k~~aliIDlas~ 242 (287)
T TIGR02853 219 ALVLTADVLSKLPKHAVIIDLASK 242 (287)
T ss_pred hHHhCHHHHhcCCCCeEEEEeCcC
Confidence 643 24567788888888888763
No 175
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.81 E-value=0.00017 Score=58.19 Aligned_cols=81 Identities=20% Similarity=0.299 Sum_probs=60.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----C---CceeecCCchhHHHHHHhHcCC-Cc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG----F---DDAFNYKEEPDLDAALNRCFPE-GI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g----~---~~vi~~~~~~~~~~~i~~~~~~-~~ 151 (270)
-|++.+|+||+.++|.+-+.=+...|.+|+.+.|++++++.++++.. . .+++|+.+++...+.+.+...+ .+
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V 127 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV 127 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence 47899999999999986555444489999999999999988875543 2 1567888762224555555555 78
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
-+.+|++|-
T Consensus 128 gILVNNvG~ 136 (312)
T KOG1014|consen 128 GILVNNVGM 136 (312)
T ss_pred EEEEecccc
Confidence 899999983
No 176
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.81 E-value=0.00021 Score=59.64 Aligned_cols=80 Identities=14% Similarity=0.250 Sum_probs=56.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----C-CC---ceeecCCc-hhHHHHHHhHcCC-
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----G-FD---DAFNYKEE-PDLDAALNRCFPE- 149 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g-~~---~vi~~~~~-~~~~~~i~~~~~~- 149 (270)
.|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++ + .. ...|..+. .+..+.+.+...+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 4789999999999999999888888999999999998877665333 1 11 12344421 1333444444444
Q ss_pred CccEEEeCCC
Q 042426 150 GIDIYFENVG 159 (270)
Q Consensus 150 ~~d~v~d~~g 159 (270)
++|++++++|
T Consensus 132 didilVnnAG 141 (320)
T PLN02780 132 DVGVLINNVG 141 (320)
T ss_pred CccEEEEecC
Confidence 5779999887
No 177
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.0005 Score=54.98 Aligned_cols=102 Identities=19% Similarity=0.234 Sum_probs=64.4
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
+.+++|+|++|++|..+++.+...|.+|+++.++.+ +.+.+.+++ +.. ...|..+.++..+.+.+... +++
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGL 85 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 578999999999999999998889999999887643 333332122 321 12355554233333333221 268
Q ss_pred cEEEeCCCcc--------------------hHHHHHHccccCCEEEEEccc
Q 042426 152 DIYFENVGGK--------------------MLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 152 d~v~d~~g~~--------------------~~~~~~~~l~~~G~~v~~g~~ 182 (270)
|+++.+.|.. .++.+.+.+..+|+++.++..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 86 DALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred cEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 9999887631 234455555566888887663
No 178
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.78 E-value=0.0003 Score=59.98 Aligned_cols=112 Identities=17% Similarity=0.094 Sum_probs=77.2
Q ss_pred ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426 60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL 139 (270)
Q Consensus 60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~ 139 (270)
+|..+....+..+.+..++++|++||-+| +|.|..+..+++..|++|++++.+++..+.+++.. ....++.... ++
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIG--cG~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~ 222 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIG--CGWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DY 222 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-ch
Confidence 33344444555565667889999999998 57888899999988999999999999999988443 2211222222 33
Q ss_pred HHHHHhHcCCCccEEEeC-----CCc----chHHHHHHccccCCEEEEEc
Q 042426 140 DAALNRCFPEGIDIYFEN-----VGG----KMLDAVLLNMRICGHIAVCG 180 (270)
Q Consensus 140 ~~~i~~~~~~~~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g 180 (270)
.. . .+.||.|+.. +|. ..++.+.+.|+|+|.++...
T Consensus 223 ~~----l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 223 RD----L-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hh----c-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 21 1 2468988743 332 35788888999999988643
No 179
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.77 E-value=8.8e-05 Score=60.13 Aligned_cols=100 Identities=21% Similarity=0.289 Sum_probs=62.9
Q ss_pred HhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHc
Q 042426 71 GLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCF 147 (270)
Q Consensus 71 ~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~ 147 (270)
.+.+..++++|++||-+| +|.|-.++.+++..|++|++++.|++..+.++++ .|....+..... ++. +.
T Consensus 53 ~~~~~~~l~~G~~vLDiG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~~----~~- 124 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DYR----DL- 124 (273)
T ss_dssp HHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--GG----G--
T ss_pred HHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ecc----cc-
Confidence 344678899999999998 6799999999999999999999999988887643 343211111111 221 11
Q ss_pred CCCccEEEe-----CCCc----chHHHHHHccccCCEEEE
Q 042426 148 PEGIDIYFE-----NVGG----KMLDAVLLNMRICGHIAV 178 (270)
Q Consensus 148 ~~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~ 178 (270)
++.||.|+. .+|. ..++.+.+.|+|+|+++.
T Consensus 125 ~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~l 164 (273)
T PF02353_consen 125 PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVL 164 (273)
T ss_dssp --S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEE
T ss_pred CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEE
Confidence 115888754 4443 257888999999999874
No 180
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.00018 Score=58.27 Aligned_cols=80 Identities=21% Similarity=0.270 Sum_probs=55.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
++.+++|+||+|++|..+++.+...|++|+++++++++.+...+++ +.. ...|..+.+++...+.+.. .+++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999999999999999899999999998877655443232 221 1245555423444444432 1368
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|+++.+.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998876
No 181
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.76 E-value=0.00026 Score=54.17 Aligned_cols=108 Identities=20% Similarity=0.259 Sum_probs=73.6
Q ss_pred CchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCceeecCCchh
Q 042426 62 GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK---HKFGFDDAFNYKEEPD 138 (270)
Q Consensus 62 ~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~---~~~g~~~vi~~~~~~~ 138 (270)
..+...|. ++ +...+++|++||=+| +|.|..++-+++..+ +|+.+.+.++=.+.++ +.+|..+|..... |
T Consensus 56 s~P~~vA~-m~-~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g--D 128 (209)
T COG2518 56 SAPHMVAR-ML-QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHG--D 128 (209)
T ss_pred cCcHHHHH-HH-HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC--C
Confidence 33444443 33 567899999999999 788999999999888 9999998876333332 1678755432222 1
Q ss_pred HHHHHHhHcCC-CccEEEeCCCcchH-HHHHHccccCCEEEEE
Q 042426 139 LDAALNRCFPE-GIDIYFENVGGKML-DAVLLNMRICGHIAVC 179 (270)
Q Consensus 139 ~~~~i~~~~~~-~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~ 179 (270)
-... .... .||.|+-+.+.+.. +..++.|+++|+++.-
T Consensus 129 G~~G---~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 129 GSKG---WPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred cccC---CCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence 1111 1122 69999887776544 6788999999999864
No 182
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.76 E-value=0.00022 Score=57.37 Aligned_cols=111 Identities=19% Similarity=0.209 Sum_probs=77.5
Q ss_pred hhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHH
Q 042426 64 PGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLD 140 (270)
Q Consensus 64 ~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~ 140 (270)
+=..+...+.+..++++|+++|=+| +|.|.+++..|+.+|++|++++-|++..+.++++ .|...-+...-. ++.
T Consensus 56 AQ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~-d~r 132 (283)
T COG2230 56 AQRAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ-DYR 132 (283)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec-ccc
Confidence 3345556666788999999999998 8999999999999999999999999988887743 344311111000 111
Q ss_pred HHHHhHcCCCccEEE-----eCCCc----chHHHHHHccccCCEEEEEccc
Q 042426 141 AALNRCFPEGIDIYF-----ENVGG----KMLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 141 ~~i~~~~~~~~d~v~-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~ 182 (270)
+. .+.||.|+ +.+|. ..+..+.++|+|+|+++.-...
T Consensus 133 ----d~-~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~ 178 (283)
T COG2230 133 ----DF-EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT 178 (283)
T ss_pred ----cc-ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence 11 11377764 45554 2678899999999998865443
No 183
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00027 Score=56.52 Aligned_cols=80 Identities=18% Similarity=0.267 Sum_probs=56.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeecCCchhHHH---HHHhHcCCCccE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD---AFNYKEEPDLDA---ALNRCFPEGIDI 153 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~---~i~~~~~~~~d~ 153 (270)
++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++++... ..|..+..+... .+.+.. +++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAF-GRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence 35789999999999999999999999999999998877766654666431 123333312222 222221 36899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
++.++|.
T Consensus 84 vi~~ag~ 90 (249)
T PRK06500 84 VFINAGV 90 (249)
T ss_pred EEECCCC
Confidence 9999873
No 184
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00023 Score=57.63 Aligned_cols=81 Identities=19% Similarity=0.249 Sum_probs=56.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CC-C---ceeecCCchhHHHHHHhHc--CC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GF-D---DAFNYKEEPDLDAALNRCF--PE 149 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~-~---~vi~~~~~~~~~~~i~~~~--~~ 149 (270)
.+.+++|+|+++++|.++++.+...|++|+++++++++.+.+.+++ +. . ...|..+..+..+.+.+.. .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 3678999999999999999999999999999999887765544232 11 1 1235555423333333322 23
Q ss_pred CccEEEeCCCc
Q 042426 150 GIDIYFENVGG 160 (270)
Q Consensus 150 ~~d~v~d~~g~ 160 (270)
++|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999999983
No 185
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.0003 Score=56.91 Aligned_cols=80 Identities=19% Similarity=0.253 Sum_probs=55.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
++.+++|+|++|++|...++.+...|++|+++++++++.+.+.+.+ +.. ...|..+.....+.+.+... +++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999999889999999999887766554332 221 12455554233333333211 368
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|++++++|
T Consensus 89 d~vi~~Ag 96 (263)
T PRK07814 89 DIVVNNVG 96 (263)
T ss_pred CEEEECCC
Confidence 99999987
No 186
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00024 Score=57.07 Aligned_cols=80 Identities=23% Similarity=0.304 Sum_probs=56.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.+++|+|+++++|..+++.+...|++|+++.++.++.+.+.+++ +.. ...|..+.+++.+.+.+.. .+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3678999999999999999999999999999999888776665443 221 1235554423333333321 1369
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|+++.+.|
T Consensus 88 d~lv~~ag 95 (253)
T PRK05867 88 DIAVCNAG 95 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 187
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00028 Score=57.61 Aligned_cols=80 Identities=19% Similarity=0.195 Sum_probs=56.4
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIYF 155 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v~ 155 (270)
+.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+..+.. ...|..+.......+.+... +++|+++
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 468999999999999999999889999999999988877666333321 12355544233333333221 3589999
Q ss_pred eCCCc
Q 042426 156 ENVGG 160 (270)
Q Consensus 156 d~~g~ 160 (270)
++.|.
T Consensus 84 ~~ag~ 88 (277)
T PRK06180 84 NNAGY 88 (277)
T ss_pred ECCCc
Confidence 99884
No 188
>PRK08017 oxidoreductase; Provisional
Probab=97.72 E-value=0.00043 Score=55.65 Aligned_cols=77 Identities=17% Similarity=0.303 Sum_probs=56.3
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHH---HHHHhHcCCCccEEEeC
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLD---AALNRCFPEGIDIYFEN 157 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~---~~i~~~~~~~~d~v~d~ 157 (270)
.+++|+|++|++|..+++.+...|++|++++++.++.+.++ +.+... ..|..+..+.. +.+.+...+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 47999999999999999999999999999999988888776 566542 34554432222 23333333468898888
Q ss_pred CC
Q 042426 158 VG 159 (270)
Q Consensus 158 ~g 159 (270)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 77
No 189
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.71 E-value=0.00058 Score=52.09 Aligned_cols=104 Identities=17% Similarity=0.296 Sum_probs=76.1
Q ss_pred CcEEEEecC-CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchh---HHHHHHhHcCCCccEEE
Q 042426 81 GEYVYVSAA-SGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPD---LDAALNRCFPEGIDIYF 155 (270)
Q Consensus 81 g~~vlI~ga-~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~---~~~~i~~~~~~~~d~v~ 155 (270)
...|||+|. +||+|.+++.-....|+.|+++.|+-+....+..++|.. .-+|.+++++ +...+++...|..|+.+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~ 86 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLY 86 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEE
Confidence 357899886 589999999999999999999999999888777688863 4456655423 44556666667899999
Q ss_pred eCCCcc-----------h--------------HHH--HHHccccCCEEEEEccccc
Q 042426 156 ENVGGK-----------M--------------LDA--VLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 156 d~~g~~-----------~--------------~~~--~~~~l~~~G~~v~~g~~~~ 184 (270)
+.+|-+ . ..+ .-.+++..|++|.+|+...
T Consensus 87 NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~ 142 (289)
T KOG1209|consen 87 NNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG 142 (289)
T ss_pred cCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence 988732 1 111 2235577899999887654
No 190
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00039 Score=57.85 Aligned_cols=79 Identities=18% Similarity=0.205 Sum_probs=54.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCF--PEG 150 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~--~~~ 150 (270)
|.+++|+||++++|.++++.+...|++|++++++.++.+.+.+++ +.. ...|..+..+..+.+.+.. .+.
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~ 93 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRP 93 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 578999999999999999988889999999999987765544333 111 1235544423333332221 236
Q ss_pred ccEEEeCCC
Q 042426 151 IDIYFENVG 159 (270)
Q Consensus 151 ~d~v~d~~g 159 (270)
+|++++++|
T Consensus 94 iD~li~nAG 102 (313)
T PRK05854 94 IHLLINNAG 102 (313)
T ss_pred ccEEEECCc
Confidence 899999887
No 191
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00025 Score=57.27 Aligned_cols=80 Identities=14% Similarity=0.162 Sum_probs=55.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-----CC---ceeecCCchhHHHHHHhHc--CC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-----FD---DAFNYKEEPDLDAALNRCF--PE 149 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-----~~---~vi~~~~~~~~~~~i~~~~--~~ 149 (270)
.+.+++|+|+++++|..+++.+...|++|+++++++++.+.+.+++. .. ...|..+..++...+.+.. .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35789999999999999999999999999999998877666553432 11 1234444423333333321 13
Q ss_pred CccEEEeCCC
Q 042426 150 GIDIYFENVG 159 (270)
Q Consensus 150 ~~d~v~d~~g 159 (270)
++|++++++|
T Consensus 86 ~id~li~~ag 95 (260)
T PRK07063 86 PLDVLVNNAG 95 (260)
T ss_pred CCcEEEECCC
Confidence 6999999988
No 192
>PRK06196 oxidoreductase; Provisional
Probab=97.71 E-value=0.00036 Score=58.11 Aligned_cols=80 Identities=18% Similarity=0.231 Sum_probs=56.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC-ceeecCCchhHHHHHHhHcC--CCccEEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-FD-DAFNYKEEPDLDAALNRCFP--EGIDIYF 155 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~ 155 (270)
.+.+++|+||+|++|..++..+...|++|++++++.++.+.+.+++. .. ...|..+..+..+.+.+... +++|+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 35789999999999999999888899999999999887665543432 21 22355554234333433322 3799999
Q ss_pred eCCC
Q 042426 156 ENVG 159 (270)
Q Consensus 156 d~~g 159 (270)
+++|
T Consensus 105 ~nAg 108 (315)
T PRK06196 105 NNAG 108 (315)
T ss_pred ECCC
Confidence 9987
No 193
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00039 Score=54.85 Aligned_cols=76 Identities=12% Similarity=0.152 Sum_probs=54.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
+++|+||++++|..+++.+...|++|+.+.++.++.+.+.++.+.. ...|..+..++.+.+.+.. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 5899999999999999999889999999999988877665455543 2245555423444333322 25899998865
No 194
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00032 Score=56.44 Aligned_cols=81 Identities=25% Similarity=0.340 Sum_probs=56.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+.+ +.. ...|..+..++.+.+.+.. .+++
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI 87 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999999999999988776665332 111 1234444323433333321 2368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++++.|.
T Consensus 88 d~li~~ag~ 96 (258)
T PRK06949 88 DILVNNSGV 96 (258)
T ss_pred CEEEECCCC
Confidence 999999983
No 195
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00024 Score=58.51 Aligned_cols=80 Identities=24% Similarity=0.376 Sum_probs=55.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeecCCchhHHHHHHhHc--CCCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-D--AFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
+.+++|+||+|++|.++++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.+.. .+++|
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id 119 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVD 119 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999998888999999999988766654332 221 1 134444423333333221 13689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
++++++|.
T Consensus 120 ~li~~AG~ 127 (293)
T PRK05866 120 ILINNAGR 127 (293)
T ss_pred EEEECCCC
Confidence 99999874
No 196
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00039 Score=55.87 Aligned_cols=80 Identities=26% Similarity=0.379 Sum_probs=55.5
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d 152 (270)
+.+++|+|+++++|..+++.+...|++|+.+++++++.+.+.+++ +.. ...|..+.++..+.+.+... +++|
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLD 85 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 568999999999999999998889999999999888776654333 322 11344444233333333221 3689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
+++.++|.
T Consensus 86 ~li~~ag~ 93 (254)
T PRK07478 86 IAFNNAGT 93 (254)
T ss_pred EEEECCCC
Confidence 99999873
No 197
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.00028 Score=56.78 Aligned_cols=81 Identities=21% Similarity=0.243 Sum_probs=56.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
++.+++|+||++++|..+++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+... +.+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 4578999999999999999999999999999999887766555343 221 22344444233333333211 358
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++.+.|.
T Consensus 84 d~vi~~ag~ 92 (258)
T PRK07890 84 DALVNNAFR 92 (258)
T ss_pred cEEEECCcc
Confidence 999998873
No 198
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.67 E-value=0.0022 Score=49.39 Aligned_cols=78 Identities=23% Similarity=0.299 Sum_probs=54.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CC-ceeecCCchhHHHHHHhHcCCCccEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG----FD-DAFNYKEEPDLDAALNRCFPEGIDIY 154 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g----~~-~vi~~~~~~~~~~~i~~~~~~~~d~v 154 (270)
++.+++|.|++|++|..++..+...|.+|+++.|+.++.+.+.++++ .. ...+..+..+..+.+. ++|+|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCEE
Confidence 46799999999999999988888889999999999888776654443 22 1122222212333332 38999
Q ss_pred EeCCCcch
Q 042426 155 FENVGGKM 162 (270)
Q Consensus 155 ~d~~g~~~ 162 (270)
|.++....
T Consensus 102 i~at~~g~ 109 (194)
T cd01078 102 FAAGAAGV 109 (194)
T ss_pred EECCCCCc
Confidence 99887644
No 199
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.66 E-value=7.6e-05 Score=67.19 Aligned_cols=97 Identities=16% Similarity=0.246 Sum_probs=64.8
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC---------------------HHHHHHHHHHhCCCceeecCC
Q 042426 77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS---------------------KEKVDLLKHKFGFDDAFNYKE 135 (270)
Q Consensus 77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~---------------------~~~~~~~~~~~g~~~vi~~~~ 135 (270)
..++|++|+|+|+ |+.|+++++.++.+|++|+++... +.+.+.++ ++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence 3677999999998 999999999999999999998742 34566677 788865554332
Q ss_pred -chhH-HHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEc
Q 042426 136 -EPDL-DAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCG 180 (270)
Q Consensus 136 -~~~~-~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g 180 (270)
. +. .+.+ ..++|.||+++|.. .....+......|.+..++
T Consensus 211 ~~-~~~~~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~ 253 (564)
T PRK12771 211 GE-DITLEQL----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD 253 (564)
T ss_pred CC-cCCHHHH----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence 1 21 1112 12599999999974 3333333444455554443
No 200
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.66 E-value=0.00046 Score=55.31 Aligned_cols=78 Identities=21% Similarity=0.361 Sum_probs=55.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEEEeC
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIYFEN 157 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v~d~ 157 (270)
+++|+|++|++|..+++.+...|++|+++++++++.+.+.+.++.. ...|..+..++.+.+.+... +++|+++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899999999999999999889999999999988877766445542 12344444233333333221 368999998
Q ss_pred CCc
Q 042426 158 VGG 160 (270)
Q Consensus 158 ~g~ 160 (270)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 873
No 201
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.66 E-value=0.00036 Score=55.88 Aligned_cols=80 Identities=24% Similarity=0.320 Sum_probs=55.6
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CC---ceeecCCchhHHHHHHhHc--CCCccE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG--FD---DAFNYKEEPDLDAALNRCF--PEGIDI 153 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g--~~---~vi~~~~~~~~~~~i~~~~--~~~~d~ 153 (270)
+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+. .. ...|..+..++...+.+.. .+.+|+
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 84 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDI 84 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999999988889999999999887766553443 11 1234444423433333321 136899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
++.+.|.
T Consensus 85 vi~~ag~ 91 (251)
T PRK07231 85 LVNNAGT 91 (251)
T ss_pred EEECCCC
Confidence 9999874
No 202
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00049 Score=55.59 Aligned_cols=83 Identities=22% Similarity=0.308 Sum_probs=56.6
Q ss_pred CCCCcEEEEecCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCCce----eecCCchhHHHHHHhHc-
Q 042426 78 PKKGEYVYVSAASG-AVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK----FGFDDA----FNYKEEPDLDAALNRCF- 147 (270)
Q Consensus 78 ~~~g~~vlI~ga~g-~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~----~g~~~v----i~~~~~~~~~~~i~~~~- 147 (270)
+..+.+++|+|++| ++|.++++.+...|++|+++++++++.+...++ ++...+ .|..+..++...+.+..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 34468999999986 899999999999999999999887766554422 343222 35555423333333321
Q ss_pred -CCCccEEEeCCCc
Q 042426 148 -PEGIDIYFENVGG 160 (270)
Q Consensus 148 -~~~~d~v~d~~g~ 160 (270)
.+++|+++++.|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 1368999999983
No 203
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00042 Score=54.68 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=54.7
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.+++|+|++|++|...++.+...|++|+++++++++.+.++ +.+-. ...|..+.+++.+.+.+...+++|+++.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 36999999999999999988888999999999887766665 43321 2245555423434343333347999999876
Q ss_pred c
Q 042426 160 G 160 (270)
Q Consensus 160 ~ 160 (270)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 3
No 204
>PRK05717 oxidoreductase; Validated
Probab=97.63 E-value=0.0005 Score=55.33 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=55.0
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIYF 155 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v~ 155 (270)
|.+++|+|++|++|..++..+...|++|+++.++.++.+.+.++++.. ...|..+..+..+.+.+... +.+|+++
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li 89 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALV 89 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 578999999999999999998888999999988876655554344432 12344444233333333221 3589999
Q ss_pred eCCCc
Q 042426 156 ENVGG 160 (270)
Q Consensus 156 d~~g~ 160 (270)
.+.|.
T Consensus 90 ~~ag~ 94 (255)
T PRK05717 90 CNAAI 94 (255)
T ss_pred ECCCc
Confidence 99873
No 205
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.63 E-value=0.00057 Score=56.12 Aligned_cols=96 Identities=18% Similarity=0.170 Sum_probs=62.3
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC---CCceeecCCchhHHHHHHhHcCCCccE
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFG---FDDAFNYKEEPDLDAALNRCFPEGIDI 153 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g---~~~vi~~~~~~~~~~~i~~~~~~~~d~ 153 (270)
..++++||-.|. |.|..++.+++ +|+ +|++++.++...+.+++... ....+..... + ......++||+
T Consensus 157 ~~~g~~VLDvGc--GsG~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDl 228 (288)
T TIGR00406 157 DLKDKNVIDVGC--GSGILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADV 228 (288)
T ss_pred cCCCCEEEEeCC--ChhHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceE
Confidence 457899999984 44877777665 465 99999999988877763322 2111111111 1 11112237999
Q ss_pred EEeCCCcc----hHHHHHHccccCCEEEEEcc
Q 042426 154 YFENVGGK----MLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 154 v~d~~g~~----~~~~~~~~l~~~G~~v~~g~ 181 (270)
|+...... .+....+.|+|+|.++..|.
T Consensus 229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sgi 260 (288)
T TIGR00406 229 IVANILAEVIKELYPQFSRLVKPGGWLILSGI 260 (288)
T ss_pred EEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 98765432 56677899999999998765
No 206
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00043 Score=56.46 Aligned_cols=80 Identities=19% Similarity=0.315 Sum_probs=55.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.+++|+|++|++|.++++.+...|++|+++.++.++.+.+.+++ +.. ...|..+.+++.+.+.+.. .+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999999999999998877666554333 322 1235444423333333221 1368
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|+++++.|
T Consensus 85 d~li~nAg 92 (275)
T PRK05876 85 DVVFSNAG 92 (275)
T ss_pred CEEEECCC
Confidence 99999987
No 207
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.62 E-value=0.00045 Score=55.76 Aligned_cols=78 Identities=26% Similarity=0.306 Sum_probs=54.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--ceeecCCchhHHHHHHhHc--CCCccEEE
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD--DAFNYKEEPDLDAALNRCF--PEGIDIYF 155 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~vi~~~~~~~~~~~i~~~~--~~~~d~v~ 155 (270)
+++|+|+++++|.++++.+...|++|+++.+++++.+.+.+++ +.. ...|..+.++..+.+.+.. .+++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899999999999999999889999999999887766554343 211 1234444423443333322 23689999
Q ss_pred eCCCc
Q 042426 156 ENVGG 160 (270)
Q Consensus 156 d~~g~ 160 (270)
++.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99873
No 208
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.61 E-value=0.00049 Score=55.35 Aligned_cols=81 Identities=22% Similarity=0.312 Sum_probs=55.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.++||+|++|++|..+++.+...|++|+++.+++++.+.+.+++ |.. ...|..+..++.+.+.+.. .+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 3678999999999999999988888999999999887665544333 221 1235554423333333322 2368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++.+.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999974
No 209
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.0011 Score=53.91 Aligned_cols=78 Identities=13% Similarity=0.173 Sum_probs=53.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC----ceeecCCchhHHHHHHhHc--CCCccE
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD----DAFNYKEEPDLDAALNRCF--PEGIDI 153 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~----~vi~~~~~~~~~~~i~~~~--~~~~d~ 153 (270)
+++|+||+|++|..+++.+...|++|+++.+++++.+.+.++ .+.. ...|..+..+....+.+.. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 689999999999999999988999999999887765544323 2322 1246555423333233221 136899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
++++.|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999974
No 210
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00064 Score=54.80 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=55.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----C-ceeecCCchhHHHHHHhHcC--CCccE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF----D-DAFNYKEEPDLDAALNRCFP--EGIDI 153 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~--~~~d~ 153 (270)
+.+++|+|++|++|..+++.+...|++|+++.++.++.+.+.+++.. . ...|..+..++.+.+.+... +.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 35899999999999999999888899999999988877666534322 1 12345544244443333221 25899
Q ss_pred EEeCCC
Q 042426 154 YFENVG 159 (270)
Q Consensus 154 v~d~~g 159 (270)
+++++|
T Consensus 82 lv~~ag 87 (257)
T PRK07024 82 VIANAG 87 (257)
T ss_pred EEECCC
Confidence 999887
No 211
>PRK09186 flagellin modification protein A; Provisional
Probab=97.61 E-value=0.00046 Score=55.50 Aligned_cols=80 Identities=18% Similarity=0.230 Sum_probs=55.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---c-eeecCCchhHHHHHHhHc--CC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD---D-AFNYKEEPDLDAALNRCF--PE 149 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~-vi~~~~~~~~~~~i~~~~--~~ 149 (270)
++.+++|+|++|++|..++..+...|++|+++++++++.+.+.+++ +.. . ..|..+.+++.+.+.+.. .+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999887766554343 221 1 235555423444343322 13
Q ss_pred CccEEEeCCC
Q 042426 150 GIDIYFENVG 159 (270)
Q Consensus 150 ~~d~v~d~~g 159 (270)
++|+++.+.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999985
No 212
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.61 E-value=0.00063 Score=54.47 Aligned_cols=80 Identities=16% Similarity=0.299 Sum_probs=54.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
++.+++|+|++|++|+.+++.+...|++|+++++++++.+.+.++ .+.. ...|..+.++..+.+..... +++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 367899999999999999999988999999999988766554422 2332 12344443233333333221 368
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|.+|.++|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999987
No 213
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00057 Score=54.89 Aligned_cols=80 Identities=16% Similarity=0.247 Sum_probs=54.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeecCCchhHHHHHHhHc--CCCccE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD----DAFNYKEEPDLDAALNRCF--PEGIDI 153 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~--~~~~d~ 153 (270)
.+.+++|+||+|++|..+++.+...|++|++++++++..+... +.... ...|..+..++.+.+.+.. .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 3578999999999999999999889999999998876554444 33221 1234444323333333221 136899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
++.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999973
No 214
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00044 Score=54.90 Aligned_cols=80 Identities=18% Similarity=0.291 Sum_probs=55.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Cce--eecCCchhHHHHHHhHc--CCCccE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---DDA--FNYKEEPDLDAALNRCF--PEGIDI 153 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v--i~~~~~~~~~~~i~~~~--~~~~d~ 153 (270)
+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++.. -+. .|..+..++.+.+.+.. .+++|+
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV 85 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57899999999999999998888899999999988776665534432 111 24444323433333321 136899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
+|++.|.
T Consensus 86 vi~~ag~ 92 (237)
T PRK07326 86 LIANAGV 92 (237)
T ss_pred EEECCCC
Confidence 9998863
No 215
>PRK06128 oxidoreductase; Provisional
Probab=97.60 E-value=0.0013 Score=54.34 Aligned_cols=105 Identities=16% Similarity=0.186 Sum_probs=65.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHH---HhCCC---ceeecCCchhHHHHHHhHc--CC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE--KVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCF--PE 149 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~--~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~~ 149 (270)
.+.++||+|+++++|..+++.+...|++|+++.++.+ +.+.+.+ ..+.. ...|..+..+..+.+.+.. .+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 3578999999999999999999889999988875432 2222221 33432 1134444423333333321 13
Q ss_pred CccEEEeCCCcc---------------------------hHHHHHHccccCCEEEEEccccc
Q 042426 150 GIDIYFENVGGK---------------------------MLDAVLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 150 ~~d~v~d~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 184 (270)
++|++++++|.. .++.++..+..+|+++.+++...
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~ 195 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS 195 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence 699999998731 12334445567789998877544
No 216
>PRK06484 short chain dehydrogenase; Validated
Probab=97.59 E-value=0.00047 Score=61.55 Aligned_cols=81 Identities=23% Similarity=0.311 Sum_probs=60.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY 154 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v 154 (270)
++.+++|+|+++++|.++++.+...|++|++++++.++.+.+.++++.. ...|..+.+++.+.+.+.. .+++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999999999999999999999999999999988877766566643 2345555434444443332 1369999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
+++.|.
T Consensus 84 i~nag~ 89 (520)
T PRK06484 84 VNNAGV 89 (520)
T ss_pred EECCCc
Confidence 999873
No 217
>PRK06194 hypothetical protein; Provisional
Probab=97.59 E-value=0.00049 Score=56.41 Aligned_cols=80 Identities=14% Similarity=0.262 Sum_probs=54.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
+.++||+||+|++|..+++.+...|++|++++++.++.+...+++ +.. ...|..+..++.+.+.... .+++|
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999988889999999998876655544333 322 1124444323333333221 13689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
+++.++|.
T Consensus 86 ~vi~~Ag~ 93 (287)
T PRK06194 86 LLFNNAGV 93 (287)
T ss_pred EEEECCCC
Confidence 99999984
No 218
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.59 E-value=0.00067 Score=56.67 Aligned_cols=80 Identities=15% Similarity=0.225 Sum_probs=55.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C-c--eeecCCchhHHHHHHhH--cCCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---D-D--AFNYKEEPDLDAALNRC--FPEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~-~--vi~~~~~~~~~~~i~~~--~~~~~ 151 (270)
.+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++.. . . ..|..+..+..+.+.+. ..+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 357899999999999999998888899999999988877666545432 1 1 23444442333333332 12368
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|++++++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999987
No 219
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.59 E-value=0.00011 Score=64.41 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=67.1
Q ss_pred hhcCCCCCcEEE----EecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC
Q 042426 74 ELCSPKKGEYVY----VSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP 148 (270)
Q Consensus 74 ~~~~~~~g~~vl----I~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~ 148 (270)
.+.++++|+.+| |+||+|++|.+++|+++..|++|+.+.+++.+....+ ..+.+ .++|.+.. .+.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~~- 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKALY- 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHHH-
Confidence 356788899888 9999999999999999999999999886655443333 33443 45666554 3444443321
Q ss_pred CCccEEEeCCCcchHHHHHHccccCCEEEEEcccc
Q 042426 149 EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 149 ~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 183 (270)
..+...++.|.++|+++.++...
T Consensus 104 ------------~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 104 ------------EFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred ------------HHHHHHHHhccCCCEEEEEcccc
Confidence 24566778888889998887754
No 220
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.58 E-value=0.0015 Score=48.99 Aligned_cols=98 Identities=21% Similarity=0.334 Sum_probs=68.4
Q ss_pred cCCCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHH---HHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426 76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLK---HKFGFDDAFNYKEEPDLDAALNRCFPEGI 151 (270)
Q Consensus 76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~---~~~g~~~vi~~~~~~~~~~~i~~~~~~~~ 151 (270)
.++++|+.++=.|+ +.|...++++.... .+||++.++++..+..+ ++||.+++..... +.++.+.+.. .+
T Consensus 30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g--~Ap~~L~~~~--~~ 103 (187)
T COG2242 30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG--DAPEALPDLP--SP 103 (187)
T ss_pred hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec--cchHhhcCCC--CC
Confidence 45789999998884 55667778885443 49999999888776654 3688775433332 3344444322 48
Q ss_pred cEEEeCCCc---chHHHHHHccccCCEEEEE
Q 042426 152 DIYFENVGG---KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 152 d~v~d~~g~---~~~~~~~~~l~~~G~~v~~ 179 (270)
|.+|=--|. ..++.++..|+++|++|.-
T Consensus 104 daiFIGGg~~i~~ile~~~~~l~~ggrlV~n 134 (187)
T COG2242 104 DAIFIGGGGNIEEILEAAWERLKPGGRLVAN 134 (187)
T ss_pred CEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence 999865443 3789999999999999864
No 221
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.58 E-value=0.0029 Score=48.90 Aligned_cols=100 Identities=21% Similarity=0.329 Sum_probs=68.6
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhC-CCceeecCCchhHHHHHHhHc
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKH---KFG-FDDAFNYKEEPDLDAALNRCF 147 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~---~~g-~~~vi~~~~~~~~~~~i~~~~ 147 (270)
....+.++++++..|+ |+ |.+++.+++..+ .+|+++..+++..+.+++ .++ .+++.... . +..+.+.. .
T Consensus 34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~-d~~~~l~~-~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-G-EAPEILFT-I 108 (198)
T ss_pred HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-e-chhhhHhh-c
Confidence 3457889999999995 44 999999988764 589999999888776653 355 23322121 1 33333322 2
Q ss_pred CCCccEEEeCCCc----chHHHHHHccccCCEEEE
Q 042426 148 PEGIDIYFENVGG----KMLDAVLLNMRICGHIAV 178 (270)
Q Consensus 148 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~ 178 (270)
.+.+|.||...+. ..+..+.+.|+|+|+++.
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 2369999986553 367788889999999885
No 222
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00048 Score=55.32 Aligned_cols=79 Identities=19% Similarity=0.245 Sum_probs=54.5
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ce--eecCCchhHHHHHHhHcC--CCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-DA--FNYKEEPDLDAALNRCFP--EGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--i~~~~~~~~~~~i~~~~~--~~~d 152 (270)
|.+++|+|+++++|..+++.+...|++|+++++++++.+.+.+++ +.. .. .|..+++++.+.+.+... +.+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 457999999999999999999999999999999887766554333 221 12 244444234333333221 3689
Q ss_pred EEEeCCC
Q 042426 153 IYFENVG 159 (270)
Q Consensus 153 ~v~d~~g 159 (270)
+++++.|
T Consensus 81 ~lI~~ag 87 (252)
T PRK07677 81 ALINNAA 87 (252)
T ss_pred EEEECCC
Confidence 9999987
No 223
>PLN02253 xanthoxin dehydrogenase
Probab=97.57 E-value=0.00074 Score=55.15 Aligned_cols=80 Identities=16% Similarity=0.191 Sum_probs=55.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----ceeecCCchhHHHHHHhHcC--CCccE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-----DAFNYKEEPDLDAALNRCFP--EGIDI 153 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~--~~~d~ 153 (270)
+.+++|+|++|++|.++++.+...|++|++++++++..+.+.++++.. ...|..+.++..+.+.+... +++|+
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~ 97 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI 97 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 578999999999999999988888999999998877665554344321 12355554233333332211 36899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
+++++|.
T Consensus 98 li~~Ag~ 104 (280)
T PLN02253 98 MVNNAGL 104 (280)
T ss_pred EEECCCc
Confidence 9999873
No 224
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00059 Score=54.09 Aligned_cols=80 Identities=13% Similarity=0.190 Sum_probs=52.4
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-DAFNYKEEPDLDAALNRCF--PEGIDIY 154 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v 154 (270)
+.++||+|++|++|..+++.+...|++|+++++++++.....+++ +.. ...|..+..+..+.+.+.. .+++|++
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 86 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDAL 86 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEE
Confidence 678999999999999999998888999999998776543322122 222 1234444323333333221 1368999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
+.+.|.
T Consensus 87 i~~ag~ 92 (239)
T PRK12828 87 VNIAGA 92 (239)
T ss_pred EECCcc
Confidence 998873
No 225
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.0007 Score=54.49 Aligned_cols=83 Identities=12% Similarity=0.156 Sum_probs=53.7
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHHHHHh---CC-C-c--eeecCCchhHHHHHHhHcC
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEK-VDLLKHKF---GF-D-D--AFNYKEEPDLDAALNRCFP 148 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~-~~~~~~~~---g~-~-~--vi~~~~~~~~~~~i~~~~~ 148 (270)
+..+.+++|+||+|++|..+++.+... |++|+++++++++ .+.+.+++ +. . + ..|..+..+..+.+.+...
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 456779999999999999999877666 5899999988764 44433233 32 1 1 2344443233333433322
Q ss_pred -CCccEEEeCCCc
Q 042426 149 -EGIDIYFENVGG 160 (270)
Q Consensus 149 -~~~d~v~d~~g~ 160 (270)
+++|+++.+.|.
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 479999988764
No 226
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00077 Score=54.37 Aligned_cols=79 Identities=19% Similarity=0.315 Sum_probs=56.9
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC---ceeecCCchhHHHHHHhH---cCCCccEE
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-FD---DAFNYKEEPDLDAALNRC---FPEGIDIY 154 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-~~---~vi~~~~~~~~~~~i~~~---~~~~~d~v 154 (270)
.++||+||+|++|..+++.+...|++|++++++.++.+.+.+..+ .. ...|..+..++.+.+... ..+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 369999999999999999888889999999999888777764443 11 234555542344433332 13478999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
+.++|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999984
No 227
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00077 Score=55.85 Aligned_cols=80 Identities=21% Similarity=0.276 Sum_probs=54.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHcC--C
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCFP--E 149 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~--~ 149 (270)
.+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++ +.. ...|..+..+..+.+.+... +
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 4578999999999999999988888999999999877655433222 111 12344444233333333321 3
Q ss_pred CccEEEeCCC
Q 042426 150 GIDIYFENVG 159 (270)
Q Consensus 150 ~~d~v~d~~g 159 (270)
++|+++.++|
T Consensus 95 ~iD~li~nAg 104 (306)
T PRK06197 95 RIDLLINNAG 104 (306)
T ss_pred CCCEEEECCc
Confidence 6899999987
No 228
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00074 Score=55.01 Aligned_cols=79 Identities=22% Similarity=0.335 Sum_probs=55.6
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIYFE 156 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v~d 156 (270)
.++||+|++|++|..+++.+...|++|+++.+++++.+.+++..+.. ...|..+...+.+.+.+.. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47999999999999999988888999999999988877776443322 1234454423333333321 136899999
Q ss_pred CCCc
Q 042426 157 NVGG 160 (270)
Q Consensus 157 ~~g~ 160 (270)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9873
No 229
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00096 Score=52.48 Aligned_cols=78 Identities=18% Similarity=0.202 Sum_probs=55.4
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 160 (270)
.+++|+|++|++|..+++.+...|++|++++++.++.+.++ ..+.. ...|..+..++...+.+...+++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 36899999999999999988888999999999888777766 44543 23455554233333333332368999998874
No 230
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.53 E-value=0.00083 Score=54.08 Aligned_cols=79 Identities=20% Similarity=0.307 Sum_probs=55.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIYF 155 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v~ 155 (270)
+.+++|+|++|++|..+++.+...|++|++++++.++.+.+.++++.. ...|..+..+....+.+.. .+.+|+++
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 85 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILF 85 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999989999999999988777666455432 1234444323333333321 13689999
Q ss_pred eCCC
Q 042426 156 ENVG 159 (270)
Q Consensus 156 d~~g 159 (270)
.+.|
T Consensus 86 ~~ag 89 (257)
T PRK07067 86 NNAA 89 (257)
T ss_pred ECCC
Confidence 9887
No 231
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.53 E-value=0.00067 Score=57.27 Aligned_cols=93 Identities=18% Similarity=0.130 Sum_probs=67.4
Q ss_pred cEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC---C-CceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFG---F-DDAFNYKEEPDLDAALNRCFPEGIDIYFE 156 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g---~-~~vi~~~~~~~~~~~i~~~~~~~~d~v~d 156 (270)
.+|||+|+ |++|+.+++.+...+ .+|++.+|+.++.+.+. ... . ...+|-.+.....+.+++ +|+||+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~~-----~d~VIn 74 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIKD-----FDLVIN 74 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHhc-----CCEEEE
Confidence 46999998 999999999988777 79999999999988887 432 2 245666654344455544 799999
Q ss_pred CCCcchHHHHHH-ccccCCEEEEEcc
Q 042426 157 NVGGKMLDAVLL-NMRICGHIAVCGM 181 (270)
Q Consensus 157 ~~g~~~~~~~~~-~l~~~G~~v~~g~ 181 (270)
|.....-...++ |++.+=.++.+..
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEccc
Confidence 998764445554 4455556776655
No 232
>PRK09242 tropinone reductase; Provisional
Probab=97.53 E-value=0.00068 Score=54.59 Aligned_cols=81 Identities=21% Similarity=0.302 Sum_probs=55.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHc--CC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCF--PE 149 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~--~~ 149 (270)
.+.+++|+|+++++|..+++.+...|++|++++++.++.+.+.+++ +.. ...|..+..+....+.+.. .+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3678999999999999999999999999999999887766554333 211 1234444423333333321 13
Q ss_pred CccEEEeCCCc
Q 042426 150 GIDIYFENVGG 160 (270)
Q Consensus 150 ~~d~v~d~~g~ 160 (270)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 68999999984
No 233
>PRK08643 acetoin reductase; Validated
Probab=97.53 E-value=0.00064 Score=54.68 Aligned_cols=80 Identities=15% Similarity=0.156 Sum_probs=54.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
+.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+++ +.. ...|..+.....+.+.+.. .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999889999999999887665554333 221 1234555423333333322 13689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999873
No 234
>PRK06720 hypothetical protein; Provisional
Probab=97.53 E-value=0.0013 Score=49.47 Aligned_cols=80 Identities=16% Similarity=0.287 Sum_probs=53.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.+++|.||++++|...+..+...|++|+++.++.+..+.+.+++ +.. ...|..+..++.+.+.+.. .|++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999988888999999998877654443233 322 1233333323333332211 2468
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|++++++|
T Consensus 95 DilVnnAG 102 (169)
T PRK06720 95 DMLFQNAG 102 (169)
T ss_pred CEEEECCC
Confidence 99999887
No 235
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00088 Score=53.00 Aligned_cols=80 Identities=9% Similarity=0.151 Sum_probs=55.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhH---cCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRC---FPEG 150 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~---~~~~ 150 (270)
+|.+++|+|+++++|.+.+..+...|++|+++.+++++.+.+.++. +.. ...|..+.++..+.+.+. .++.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3678999999999999999999889999999999888776554332 332 112444432333333322 2226
Q ss_pred ccEEEeCCC
Q 042426 151 IDIYFENVG 159 (270)
Q Consensus 151 ~d~v~d~~g 159 (270)
+|+++++.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
No 236
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.0011 Score=53.56 Aligned_cols=81 Identities=25% Similarity=0.410 Sum_probs=55.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-c--eeecCCchhHHHHHHhHc-CCCccE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--D-D--AFNYKEEPDLDAALNRCF-PEGIDI 153 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~--vi~~~~~~~~~~~i~~~~-~~~~d~ 153 (270)
++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++.. . + ..|..+..+..+.+.... .+.+|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 357899999999999999999888999999999998877766544311 1 1 134444322222222211 246899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
++.++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999874
No 237
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.52 E-value=0.00082 Score=53.36 Aligned_cols=79 Identities=15% Similarity=0.196 Sum_probs=53.4
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCC-ceeecCCchhHHHHHHhHcC--CCccEEEe
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV-DLLKHKFGFD-DAFNYKEEPDLDAALNRCFP--EGIDIYFE 156 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~-~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~d 156 (270)
+.+++|+|+++++|..+++.+...|++|+++++++++. +.++ ..+.. ...|..+.++..+.+.+... +++|++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 35799999999999999999988999999999876543 3333 44532 12344443234443433322 36899999
Q ss_pred CCCc
Q 042426 157 NVGG 160 (270)
Q Consensus 157 ~~g~ 160 (270)
+.|.
T Consensus 81 ~ag~ 84 (236)
T PRK06483 81 NASD 84 (236)
T ss_pred CCcc
Confidence 9873
No 238
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.51 E-value=0.00083 Score=53.98 Aligned_cols=81 Identities=20% Similarity=0.359 Sum_probs=55.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.++||+||++++|..+++.+...|++|+++.+++++.+.+.+++ +.. ...|..+.+++.+.+.+.. .+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 3568999999999999999999889999999999877665544333 221 1234444423333333321 1368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999973
No 239
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00077 Score=53.95 Aligned_cols=80 Identities=19% Similarity=0.238 Sum_probs=53.5
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.+++|+|++|++|..+++.+...|++|+++.+++++.+.+.+++ +.. ...|..+..+....+.+.. .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 3568999999999999999988888999999999876655443232 211 1234444323332222221 1258
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|++|.++|
T Consensus 85 d~vi~~ag 92 (250)
T PRK07774 85 DYLVNNAA 92 (250)
T ss_pred CEEEECCC
Confidence 99999988
No 240
>PRK08589 short chain dehydrogenase; Validated
Probab=97.51 E-value=0.00071 Score=55.08 Aligned_cols=80 Identities=20% Similarity=0.255 Sum_probs=53.5
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
++.++||+|+++++|..+++.+...|++|++++++ ++.+.+.+++ +.. ...|..+..+....+.+.. .+.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 36789999999999999999888899999999988 4443333233 221 2245555423333333322 1368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|++++++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999873
No 241
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.51 E-value=0.00085 Score=53.65 Aligned_cols=80 Identities=21% Similarity=0.294 Sum_probs=53.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-H-HHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-K-VDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~-~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
.+.+++|+|++|++|..+++.+...|++|++++++.. + .+.++ +.+.. ...|..+.+++...+.+.. .+++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3678999999999999999999889999999998652 1 22233 33422 2235554434443333322 13689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
++++++|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99999873
No 242
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00077 Score=55.01 Aligned_cols=79 Identities=19% Similarity=0.306 Sum_probs=54.8
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-----ceeecCCchhHHHHHHhHcC--CC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD-----DAFNYKEEPDLDAALNRCFP--EG 150 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~-----~vi~~~~~~~~~~~i~~~~~--~~ 150 (270)
+.++||+||+|++|..++..+...|++|+++++++++.+.+.+. .+.+ ...|..+.+++.. +.+... ++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~ 81 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR 81 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence 45799999999999999998888899999999988776555422 2211 1235555434444 444322 36
Q ss_pred ccEEEeCCCc
Q 042426 151 IDIYFENVGG 160 (270)
Q Consensus 151 ~d~v~d~~g~ 160 (270)
+|+++.+.|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999873
No 243
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.0008 Score=54.36 Aligned_cols=79 Identities=20% Similarity=0.326 Sum_probs=53.7
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCccE
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGIDI 153 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~ 153 (270)
.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+.+...+.+... +++|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999998889999999999877655443232 321 12344444233333333221 35899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
++.|.|.
T Consensus 82 vi~~ag~ 88 (263)
T PRK06181 82 LVNNAGI 88 (263)
T ss_pred EEECCCc
Confidence 9999874
No 244
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00084 Score=53.68 Aligned_cols=79 Identities=18% Similarity=0.285 Sum_probs=54.4
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCFP--EG 150 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~--~~ 150 (270)
+.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+.+ +.. ...|..+..++.+.+.+... ++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457999999999999999888888999999999888776554222 211 12355554234443333321 36
Q ss_pred ccEEEeCCC
Q 042426 151 IDIYFENVG 159 (270)
Q Consensus 151 ~d~v~d~~g 159 (270)
+|+++.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 899999987
No 245
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0011 Score=54.04 Aligned_cols=80 Identities=23% Similarity=0.247 Sum_probs=55.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeecCCchhHHHHHHhHc--CCCccEEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-D--AFNYKEEPDLDAALNRCF--PEGIDIYF 155 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d~v~ 155 (270)
+.+++|+||+|++|..+++.+...|.+|++++++.++.+.+.+..+.. . ..|..+..++...+.+.. .+++|.++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 357999999999999999988888999999999988777665344322 1 234444323333333221 13689999
Q ss_pred eCCCc
Q 042426 156 ENVGG 160 (270)
Q Consensus 156 d~~g~ 160 (270)
.++|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99884
No 246
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.49 E-value=0.00091 Score=53.92 Aligned_cols=81 Identities=25% Similarity=0.373 Sum_probs=55.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
.+.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+..++.+.+.+... +++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3578999999999999999999889999999999887766554333 221 12355544234333333211 368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|.++.++|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999873
No 247
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0013 Score=52.27 Aligned_cols=80 Identities=19% Similarity=0.273 Sum_probs=54.5
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-C---ceeecCC---c--hhHHHHHHhHcC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF-D---DAFNYKE---E--PDLDAALNRCFP 148 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~-~---~vi~~~~---~--~~~~~~i~~~~~ 148 (270)
+.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+++ +. . ...|..+ . ..+.+.+.+...
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~ 85 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQ 85 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhC
Confidence 568999999999999999999889999999999988766554332 21 1 1123321 1 123334444443
Q ss_pred CCccEEEeCCCc
Q 042426 149 EGIDIYFENVGG 160 (270)
Q Consensus 149 ~~~d~v~d~~g~ 160 (270)
+.+|.++.++|.
T Consensus 86 ~~id~vi~~ag~ 97 (239)
T PRK08703 86 GKLDGIVHCAGY 97 (239)
T ss_pred CCCCEEEEeccc
Confidence 468999999883
No 248
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.001 Score=53.24 Aligned_cols=80 Identities=18% Similarity=0.243 Sum_probs=54.5
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CCC---ceeecCCchhHHHHHHhHcC--CCccE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF--GFD---DAFNYKEEPDLDAALNRCFP--EGIDI 153 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~--g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~ 153 (270)
+.+++|+|++|++|..+++.+...|++|++++++.++.+...++. +.. ...|..+..+..+.+.+... +++|+
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 84 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV 84 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 568999999999999999988888999999999887665554333 221 11344444233333333211 36899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
++.+.|.
T Consensus 85 vi~~ag~ 91 (252)
T PRK06138 85 LVNNAGF 91 (252)
T ss_pred EEECCCC
Confidence 9999983
No 249
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.47 E-value=0.00092 Score=54.51 Aligned_cols=104 Identities=11% Similarity=0.100 Sum_probs=68.7
Q ss_pred CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCC--ceeecCCchhHHHHHHhHcC--CC
Q 042426 80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFP--EG 150 (270)
Q Consensus 80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~ 150 (270)
.+.+++|+||+ +++|+++++.+...|++|+++.++.+ +.+.+.++++.. ...|..+.++..+.+.+... +.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 36789999996 79999999999889999999988743 334443344532 22455554334444433322 46
Q ss_pred ccEEEeCCCcc---------------h---------------HHHHHHccccCCEEEEEcccc
Q 042426 151 IDIYFENVGGK---------------M---------------LDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 151 ~d~v~d~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~ 183 (270)
+|++++++|.. . .+..+..+..+|+++.+++..
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 89999998831 0 234555667789999887644
No 250
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.47 E-value=0.0026 Score=51.36 Aligned_cols=105 Identities=10% Similarity=0.045 Sum_probs=67.0
Q ss_pred CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhC-CC---ceeecCCchhHHHHHHhHcC--
Q 042426 80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSK---EKVDLLKHKFG-FD---DAFNYKEEPDLDAALNRCFP-- 148 (270)
Q Consensus 80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~---~~~~~~~~~~g-~~---~vi~~~~~~~~~~~i~~~~~-- 148 (270)
.+.+++|+||+ +++|.++++.+...|++|++++++. ++.+.+.+++. .. ...|..+.++..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 36789999997 7999999998888999999987542 44455543442 11 12355554344444443322
Q ss_pred CCccEEEeCCCcc-------h-----------------------HHHHHHccccCCEEEEEccccc
Q 042426 149 EGIDIYFENVGGK-------M-----------------------LDAVLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 149 ~~~d~v~d~~g~~-------~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 184 (270)
|++|++++++|.. . .+..+..+.++|+++.+++...
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 151 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG 151 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence 4689999987621 0 1234445666799998876543
No 251
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.0013 Score=52.93 Aligned_cols=75 Identities=15% Similarity=0.289 Sum_probs=52.6
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcCCCccEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFPEGIDIY 154 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~v 154 (270)
+.++||+|++|++|..+++.+...|++|+++++++++.+.+.+. .+.. ...|..+. +.+.+...+++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA----IDRAQAAEWDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH----HHHHHHhcCCCCEE
Confidence 35799999999999999999999999999999987766555422 2222 12344443 12333223369999
Q ss_pred EeCCC
Q 042426 155 FENVG 159 (270)
Q Consensus 155 ~d~~g 159 (270)
|.+.|
T Consensus 78 i~~ag 82 (257)
T PRK09291 78 LNNAG 82 (257)
T ss_pred EECCC
Confidence 99987
No 252
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.00057 Score=55.48 Aligned_cols=77 Identities=19% Similarity=0.392 Sum_probs=53.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEeC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFEN 157 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d~ 157 (270)
+.+++|+|++|++|..+++.+...|++|++++++.++.+... +.. ...|..+..++.+.+.+.. .+.+|+++++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 468999999999999999998888999999998876544321 222 2345555434444444332 2368999999
Q ss_pred CCc
Q 042426 158 VGG 160 (270)
Q Consensus 158 ~g~ 160 (270)
.|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 984
No 253
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0018 Score=52.16 Aligned_cols=79 Identities=23% Similarity=0.384 Sum_probs=55.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-c--eeecCCchhHHHHHHhHcCCCcc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD-D--AFNYKEEPDLDAALNRCFPEGID 152 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~--vi~~~~~~~~~~~i~~~~~~~~d 152 (270)
.+.+++|+|+++++|..+++.+...|++|+++++++++.+.+.+++ +.. + ..|..+.+++.+.+.+. +.+|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence 3679999999999999999998889999999999887766654333 221 1 23444442333333332 3699
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
+++++.|.
T Consensus 84 ~lv~~ag~ 91 (259)
T PRK06125 84 ILVNNAGA 91 (259)
T ss_pred EEEECCCC
Confidence 99999873
No 254
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.45 E-value=0.0011 Score=53.95 Aligned_cols=80 Identities=11% Similarity=0.154 Sum_probs=53.4
Q ss_pred CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHhCCCc--eeecCCchhHHHHHHhHcC--CC
Q 042426 80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKEKV---DLLKHKFGFDD--AFNYKEEPDLDAALNRCFP--EG 150 (270)
Q Consensus 80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~~~---~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~ 150 (270)
++.++||+|+++ ++|.++++.+...|++|+++.++++.. +.+.++.|... ..|..+.++....+.+... |.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 467899999986 999999999989999999988765322 33322345322 2355554334444433322 46
Q ss_pred ccEEEeCCC
Q 042426 151 IDIYFENVG 159 (270)
Q Consensus 151 ~d~v~d~~g 159 (270)
+|++++++|
T Consensus 86 iD~lVnnAG 94 (271)
T PRK06505 86 LDFVVHAIG 94 (271)
T ss_pred CCEEEECCc
Confidence 999999987
No 255
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0009 Score=53.73 Aligned_cols=81 Identities=17% Similarity=0.209 Sum_probs=54.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.+. .+.. ...|..+.+++...+.+.. .+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 357899999999999999998888899999999988765544322 2322 1234444323333333221 1368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999873
No 256
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.44 E-value=0.0012 Score=53.76 Aligned_cols=80 Identities=19% Similarity=0.281 Sum_probs=54.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.+++|+|+++++|+++++.+...|++|+++.+++++.+.+.+++ +.. ...|..+..+....+.+.. -+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999999999999999877665554333 221 1234444323333333221 1368
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|+++.++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999987
No 257
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.0012 Score=52.59 Aligned_cols=81 Identities=15% Similarity=0.222 Sum_probs=55.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.+++|+|++|++|..++..+...|.+|+++++++++.+.+.++. +.. ...|..+..+....+.+.. .+++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4568999999999999999999989999999999887765554332 221 1234444323333333321 1358
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++.+.|.
T Consensus 85 d~lv~~ag~ 93 (241)
T PRK07454 85 DVLINNAGM 93 (241)
T ss_pred CEEEECCCc
Confidence 999999983
No 258
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.001 Score=53.33 Aligned_cols=79 Identities=22% Similarity=0.335 Sum_probs=54.0
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeecCCchhHHHHHHhHcC--CCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-D--AFNYKEEPDLDAALNRCFP--EGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d 152 (270)
+.+++|+|++|++|.++++.+...|++|+.++++.++.+.+.+++ +.. + ..|..+..+....+.+... +.+|
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 87 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLD 87 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999989999999999877766554333 221 1 1244443233333333211 2589
Q ss_pred EEEeCCC
Q 042426 153 IYFENVG 159 (270)
Q Consensus 153 ~v~d~~g 159 (270)
+++.+.|
T Consensus 88 ~li~~ag 94 (252)
T PRK07035 88 ILVNNAA 94 (252)
T ss_pred EEEECCC
Confidence 9999887
No 259
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.43 E-value=0.0014 Score=52.65 Aligned_cols=79 Identities=22% Similarity=0.319 Sum_probs=54.5
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
+.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+++ +.. ...|..+..++.+.+.... .+++|
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 83 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD 83 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999988888999999999887765554233 322 2235555423333333221 13689
Q ss_pred EEEeCCC
Q 042426 153 IYFENVG 159 (270)
Q Consensus 153 ~v~d~~g 159 (270)
+++.+++
T Consensus 84 ~vi~~a~ 90 (258)
T PRK12429 84 ILVNNAG 90 (258)
T ss_pred EEEECCC
Confidence 9999887
No 260
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.42 E-value=0.0015 Score=52.04 Aligned_cols=80 Identities=25% Similarity=0.354 Sum_probs=54.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIYF 155 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v~ 155 (270)
+.+++|+|++|++|..+++.+...|+.|+...++.++.+.+.+..+.. ...|..+.+++.+.+.+.. .+++|.++
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 85 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILV 85 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 568999999999999999998889999998888877776665344432 1234444323333333221 13689999
Q ss_pred eCCCc
Q 042426 156 ENVGG 160 (270)
Q Consensus 156 d~~g~ 160 (270)
.+.|.
T Consensus 86 ~~ag~ 90 (245)
T PRK12936 86 NNAGI 90 (245)
T ss_pred ECCCC
Confidence 99873
No 261
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.42 E-value=0.0011 Score=52.82 Aligned_cols=80 Identities=21% Similarity=0.306 Sum_probs=54.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d 152 (270)
+.+++|.|++|++|..++..+...|++|+++++++++.+.+.+++ +.. ...|..+..++.+.+++... +++|
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID 86 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence 468999999999999999988889999999999877655443232 221 12344444234444443321 3689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
.++.+.|.
T Consensus 87 ~vi~~ag~ 94 (239)
T PRK07666 87 ILINNAGI 94 (239)
T ss_pred EEEEcCcc
Confidence 99998874
No 262
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0016 Score=52.43 Aligned_cols=80 Identities=20% Similarity=0.273 Sum_probs=54.8
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD----DAFNYKEEPDLDAALNRCFP--EGIDIY 154 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~~--~~~d~v 154 (270)
+.+++|+|++|++|...+..+...|++|++++++.++.+.+.+.+... ...|..+..++...+.+... +++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457999999999999999988888999999999888776655343211 12344444233333333211 358999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999974
No 263
>PRK08309 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.017 Score=43.73 Aligned_cols=91 Identities=16% Similarity=0.161 Sum_probs=58.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c----eeecCCchhHHHHHHhHc--CCCccEEE
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-D----AFNYKEEPDLDAALNRCF--PEGIDIYF 155 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~----vi~~~~~~~~~~~i~~~~--~~~~d~v~ 155 (270)
+++|+||+ ++|..+++.+...|++|++.++++++.+.+...++.. . ..|.++..+..+.+.... .+++|++|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 58999997 5666677777778999999999888776665334321 1 136666534544444432 23689999
Q ss_pred eCCCcchHHHHHHccccCC
Q 042426 156 ENVGGKMLDAVLLNMRICG 174 (270)
Q Consensus 156 d~~g~~~~~~~~~~l~~~G 174 (270)
+.+-...-+.....++..|
T Consensus 81 ~~vh~~~~~~~~~~~~~~g 99 (177)
T PRK08309 81 AWIHSSAKDALSVVCRELD 99 (177)
T ss_pred EeccccchhhHHHHHHHHc
Confidence 9887655455555555444
No 264
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0029 Score=50.41 Aligned_cols=104 Identities=15% Similarity=0.103 Sum_probs=63.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HhCCC-c--eeecCCchhHHHHHHhHc--CCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKH---KFGFD-D--AFNYKEEPDLDAALNRCF--PEG 150 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~--~~~ 150 (270)
++.+++|+|++|++|..+++.+...|++++.+.++.. ..+.+.+ ..+.. . ..|..+..++.+.+.+.. .++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999888776433 2222221 22321 1 134444323333333321 136
Q ss_pred ccEEEeCCCcc-----------h---------------HHHHHHccccCCEEEEEcccc
Q 042426 151 IDIYFENVGGK-----------M---------------LDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 151 ~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~ 183 (270)
+|+++.++|.. . ++.+++.++.+|+++.++...
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 142 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV 142 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence 89999998731 0 123344555678898887643
No 265
>PRK07985 oxidoreductase; Provisional
Probab=97.41 E-value=0.0021 Score=53.02 Aligned_cols=105 Identities=15% Similarity=0.121 Sum_probs=65.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--C
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK--EKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--E 149 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~--~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~ 149 (270)
.+.+++|+||++++|.++++.+...|++|+++.++. ++.+.+.+ +.+.. ...|..+.++..+.+.+... +
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 456899999999999999999998999999877542 33333331 22322 22355444234443333322 3
Q ss_pred CccEEEeCCCcc---------------------------hHHHHHHccccCCEEEEEccccc
Q 042426 150 GIDIYFENVGGK---------------------------MLDAVLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 150 ~~d~v~d~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 184 (270)
++|+++.+.|.. .++..+..++.+|+++.+++...
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~ 189 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence 689999987631 01334445566789998877544
No 266
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.41 E-value=0.0016 Score=52.68 Aligned_cols=97 Identities=16% Similarity=0.171 Sum_probs=74.9
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC--
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG-- 159 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g-- 159 (270)
.+|.|+|+ |-+|.-++++|.-+|++|...+.+.++++.+...++-..-.-+++...+.+.+.+ .|+++.++=
T Consensus 169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~-----aDlvIgaVLIp 242 (371)
T COG0686 169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKK-----ADLVIGAVLIP 242 (371)
T ss_pred ccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhh-----ccEEEEEEEec
Confidence 35777887 9999999999999999999999999999999877776522334444356666654 899988662
Q ss_pred -c--c--hHHHHHHccccCCEEEEEccccc
Q 042426 160 -G--K--MLDAVLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 160 -~--~--~~~~~~~~l~~~G~~v~~g~~~~ 184 (270)
. + ..++.++.|+|++.++.+....+
T Consensus 243 gakaPkLvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred CCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence 2 1 57888999999999998765433
No 267
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0015 Score=53.23 Aligned_cols=79 Identities=13% Similarity=0.125 Sum_probs=54.0
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-----CC-ce--eecCCchhHHHHHHhHcC--CC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-----FD-DA--FNYKEEPDLDAALNRCFP--EG 150 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-----~~-~v--i~~~~~~~~~~~i~~~~~--~~ 150 (270)
+.+++|+|++|++|..+++.+...|++|+++++++++.+...+++. .. .+ .|..+..+....+.+... ++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGR 86 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999988776554432321 11 11 244444233333333321 36
Q ss_pred ccEEEeCCC
Q 042426 151 IDIYFENVG 159 (270)
Q Consensus 151 ~d~v~d~~g 159 (270)
+|+++.+.|
T Consensus 87 ~d~li~~ag 95 (276)
T PRK05875 87 LHGVVHCAG 95 (276)
T ss_pred CCEEEECCC
Confidence 899999987
No 268
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.40 E-value=0.0013 Score=52.75 Aligned_cols=79 Identities=18% Similarity=0.300 Sum_probs=53.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK--VDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~--~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
.+.+++|+|+++++|.++++.+...|++|+++.++... .+.++ +.+.. ...|..+..+..+.+.+.. .+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46789999999999999999999999999988865422 22232 44432 1245555434444443321 23689
Q ss_pred EEEeCCC
Q 042426 153 IYFENVG 159 (270)
Q Consensus 153 ~v~d~~g 159 (270)
+++++.|
T Consensus 86 ~lv~~ag 92 (251)
T PRK12481 86 ILINNAG 92 (251)
T ss_pred EEEECCC
Confidence 9999987
No 269
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0013 Score=52.89 Aligned_cols=78 Identities=15% Similarity=0.200 Sum_probs=53.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d 152 (270)
+.+++|+||+|++|..+++.+...|++|+++++++++.+... ++ +.. ...|..+..++...+.+... +++|
T Consensus 7 ~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 7 DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAE-ELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHH-HHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 568999999999999999988889999999998877654333 32 322 22344444234333333221 3689
Q ss_pred EEEeCCC
Q 042426 153 IYFENVG 159 (270)
Q Consensus 153 ~v~d~~g 159 (270)
+++.++|
T Consensus 86 ~vi~~ag 92 (258)
T PRK08628 86 GLVNNAG 92 (258)
T ss_pred EEEECCc
Confidence 9999998
No 270
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.38 E-value=0.0019 Score=53.73 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=55.5
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCC----c--eeecCCchhHHHHHHhHc--CCCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFD----D--AFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~----~--vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
+.+++|+|+++++|.++++.+...| ++|++++++.++.+.+.++++.. . ..|..+.++....+.+.. .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999998888889 89999999888776665455421 1 135544423333333321 2368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|++++++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999998873
No 271
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.38 E-value=0.0022 Score=55.27 Aligned_cols=74 Identities=20% Similarity=0.240 Sum_probs=55.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
-.+.+++|.|+ |++|.+++..+...|+ +++++.|+.++.+.+.++++...++.+. +..+.+. .+|+||+|
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADIIIAA 249 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEEEEC
Confidence 45678999997 9999999999999997 8999999988877777677622233221 2323332 39999999
Q ss_pred CCcc
Q 042426 158 VGGK 161 (270)
Q Consensus 158 ~g~~ 161 (270)
++.+
T Consensus 250 T~a~ 253 (414)
T PRK13940 250 VNVL 253 (414)
T ss_pred cCCC
Confidence 9975
No 272
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.38 E-value=0.0013 Score=53.01 Aligned_cols=81 Identities=15% Similarity=0.223 Sum_probs=53.8
Q ss_pred CCcEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426 80 KGEYVYVSAA--SGAVGQLVGQFVKLVGCYVVGSARSK--EKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEG 150 (270)
Q Consensus 80 ~g~~vlI~ga--~g~vG~~ai~la~~~g~~v~~~~~~~--~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~ 150 (270)
.+.+++|+|+ ++++|.++++.+...|++|++++++. +..+.+.++++.. ...|..+.++..+.+.+.. .++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999 79999999998888999999988653 3445554344432 2235554423333333322 246
Q ss_pred ccEEEeCCCc
Q 042426 151 IDIYFENVGG 160 (270)
Q Consensus 151 ~d~v~d~~g~ 160 (270)
+|++++++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998873
No 273
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.37 E-value=0.0013 Score=52.79 Aligned_cols=79 Identities=14% Similarity=0.124 Sum_probs=52.3
Q ss_pred CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD----DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.+++|+||+ +++|.++++.+...|++|+++.++++..+.++ ++... ...|..+.++..+.+.+.. .+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 46789999998 79999999999889999999988744333343 33221 1234444423333333322 1368
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|++++++|
T Consensus 85 D~lv~nAg 92 (252)
T PRK06079 85 DGIVHAIA 92 (252)
T ss_pred CEEEEccc
Confidence 99999887
No 274
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.37 E-value=0.0042 Score=48.32 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=75.2
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceee-cCCchhHHHHHHhHc
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKH---KFGFDDAFN-YKEEPDLDAALNRCF 147 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~vi~-~~~~~~~~~~i~~~~ 147 (270)
.+.+.+...+||=+| +++|.+++.+|..+. .+++.+.++++..+.+++ +.|.+..+. .... +..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence 445667778899998 899999999999876 489999999998887773 456654222 2213 5666666644
Q ss_pred CCCccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426 148 PEGIDIYFENVGG----KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 148 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~ 179 (270)
.+.||+||==... ..++.++++|++||.++.=
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 4589999754442 3789999999999998864
No 275
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00099 Score=53.36 Aligned_cols=73 Identities=22% Similarity=0.339 Sum_probs=48.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
+.+++|+||+|++|..+++.+...|++|++++++.. ..+... .+.. ...|..+. . .+.+.. +++|+++++
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~---~-~~~~~~-~~iDilVnn 86 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND--ESPNEWIKWECGKE---E-SLDKQL-ASLDVLILN 86 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc--cCCCeEEEeeCCCH---H-HHHHhc-CCCCEEEEC
Confidence 578999999999999999999899999999998762 222211 1111 12344433 1 222222 359999999
Q ss_pred CCc
Q 042426 158 VGG 160 (270)
Q Consensus 158 ~g~ 160 (270)
+|.
T Consensus 87 AG~ 89 (245)
T PRK12367 87 HGI 89 (245)
T ss_pred Ccc
Confidence 974
No 276
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.36 E-value=0.0014 Score=52.81 Aligned_cols=80 Identities=18% Similarity=0.274 Sum_probs=54.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeecCCchhHHHHHHhHc--CCCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD---AFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
+.++||+|++|++|..+++.+...|++|+++++++++.+.+.++ .+... ..|..+...+.+.+.+.. .+++|
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 86 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVD 86 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999999999999999999988765544433 23321 134444423333333221 13589
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
+++.+.|.
T Consensus 87 ~vi~~ag~ 94 (262)
T PRK13394 87 ILVSNAGI 94 (262)
T ss_pred EEEECCcc
Confidence 99999874
No 277
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.36 E-value=0.0021 Score=51.70 Aligned_cols=81 Identities=22% Similarity=0.301 Sum_probs=55.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
++.+++|+|+++++|..+++.+...|++|+++.+++++.+.+.++ .+.. ...|..+..++...+.+... +++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 467999999999999999998888899999999988765554322 2321 12344444233333333221 368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|.++.+.|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999884
No 278
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.35 E-value=0.0019 Score=52.04 Aligned_cols=78 Identities=24% Similarity=0.268 Sum_probs=52.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
+.+++|+|+++++|.++++.+...|++|+++.+++...+... ++ +.. ...|..+.++....+.+.. .+++|
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 578999999999999999999889999999998754322222 32 322 1235555423333333322 13699
Q ss_pred EEEeCCC
Q 042426 153 IYFENVG 159 (270)
Q Consensus 153 ~v~d~~g 159 (270)
+++.++|
T Consensus 87 ~lv~nAg 93 (260)
T PRK12823 87 VLINNVG 93 (260)
T ss_pred EEEECCc
Confidence 9999987
No 279
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.35 E-value=0.0023 Score=53.29 Aligned_cols=94 Identities=15% Similarity=0.194 Sum_probs=61.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENVGGK 161 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~ 161 (270)
+|+|+||+|-+|..+++.+...|.+|++++|+.++...+. ..+...+ .|..++.++.+.+. ++|.|+++++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al~-----g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSFK-----GVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHHC-----CCCEEEECCCCC
Confidence 6999999999999999998888999999999877665554 4455322 24343312333332 489999987631
Q ss_pred -----h--------HHHHHHccccCC--EEEEEccc
Q 042426 162 -----M--------LDAVLLNMRICG--HIAVCGMI 182 (270)
Q Consensus 162 -----~--------~~~~~~~l~~~G--~~v~~g~~ 182 (270)
. ....++.++..| +++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 0 123344444443 88887764
No 280
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.35 E-value=0.0012 Score=53.21 Aligned_cols=79 Identities=16% Similarity=0.261 Sum_probs=52.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hC-C-CceeecCCchhHHH---HHHhHcCCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FG-F-DDAFNYKEEPDLDA---ALNRCFPEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g-~-~~vi~~~~~~~~~~---~i~~~~~~~~ 151 (270)
+|+.|||+||++|+|.+.++=...+|+++++.+.+.+..++..++ .| + ..+.|-++.++... ++++.. |.+
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G~V 115 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-GDV 115 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-CCc
Confidence 589999999999999988877777799888888665533332222 24 2 24445555434443 333332 368
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|+++|.+|
T Consensus 116 ~ILVNNAG 123 (300)
T KOG1201|consen 116 DILVNNAG 123 (300)
T ss_pred eEEEeccc
Confidence 99999998
No 281
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.34 E-value=0.0026 Score=55.05 Aligned_cols=75 Identities=25% Similarity=0.426 Sum_probs=55.6
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEE
Q 042426 77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYF 155 (270)
Q Consensus 77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~ 155 (270)
...++.+++|+|+ |.+|..+++.++..|+ +|+++.++.++.+.+.+++|.. .++.. +..+.+. ++|+||
T Consensus 176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~---~l~~~l~-----~aDvVi 245 (417)
T TIGR01035 176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE---DLEEYLA-----EADIVI 245 (417)
T ss_pred CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH---HHHHHHh-----hCCEEE
Confidence 3456789999997 9999999999999994 8999999988766454477753 33221 3333332 499999
Q ss_pred eCCCcc
Q 042426 156 ENVGGK 161 (270)
Q Consensus 156 d~~g~~ 161 (270)
+|++.+
T Consensus 246 ~aT~s~ 251 (417)
T TIGR01035 246 SSTGAP 251 (417)
T ss_pred ECCCCC
Confidence 999864
No 282
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.34 E-value=0.0015 Score=53.18 Aligned_cols=82 Identities=12% Similarity=0.177 Sum_probs=53.8
Q ss_pred CCCCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhCCC--ceeecCCchhHHHHHHhHc--C
Q 042426 78 PKKGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSK---EKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCF--P 148 (270)
Q Consensus 78 ~~~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~---~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~--~ 148 (270)
+-.+.+++|+|++ +++|.++++.+...|++|+++.+++ ++.+.+.++++.. ...|..+..+..+.+.+.. .
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 3356789999996 7999999999988999999887764 3344444344532 2234444423433333322 2
Q ss_pred CCccEEEeCCC
Q 042426 149 EGIDIYFENVG 159 (270)
Q Consensus 149 ~~~d~v~d~~g 159 (270)
+.+|++++++|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 36899999987
No 283
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.34 E-value=0.0016 Score=51.87 Aligned_cols=80 Identities=23% Similarity=0.325 Sum_probs=54.4
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-e--eecCCchhHHHHHHhHcC--CCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD-A--FNYKEEPDLDAALNRCFP--EGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v--i~~~~~~~~~~~i~~~~~--~~~d 152 (270)
+.+++|+|++|++|..+++.+...|.+|+++.+++++.+.+.+. .+... . .|..+...+.+.+.+... +.+|
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD 84 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999999888899999999988775554322 23221 1 355544234343333211 2589
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
.++.++|.
T Consensus 85 ~vi~~ag~ 92 (246)
T PRK05653 85 ILVNNAGI 92 (246)
T ss_pred EEEECCCc
Confidence 99999864
No 284
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.33 E-value=0.0018 Score=52.13 Aligned_cols=80 Identities=16% Similarity=0.222 Sum_probs=52.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
.+.++||+||++++|...++.+...|++|++++++ ++.+.+.+ +.+.. ...|..+.++....+.+.. .+++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 36799999999999999999999999999999877 33333332 22322 1234444423333333322 1368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++.+.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999998873
No 285
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0018 Score=53.12 Aligned_cols=81 Identities=17% Similarity=0.230 Sum_probs=53.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHHh---CCC---ceeecCCchhHHHHHH
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK---------EKVDLLKHKF---GFD---DAFNYKEEPDLDAALN 144 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~---------~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~ 144 (270)
++.+++|+||++++|.++++.+...|++|++++++. ++.+.+.+++ +.. ...|..+.++..+.+.
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 567999999999999999998888999999987654 4433333233 322 1234554423333333
Q ss_pred hHc--CCCccEEEeCCCc
Q 042426 145 RCF--PEGIDIYFENVGG 160 (270)
Q Consensus 145 ~~~--~~~~d~v~d~~g~ 160 (270)
+.. .+.+|++++++|.
T Consensus 85 ~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 85 AAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 322 1468999999873
No 286
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.33 E-value=0.0019 Score=52.17 Aligned_cols=80 Identities=11% Similarity=0.202 Sum_probs=52.4
Q ss_pred CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCc--eeecCCchhHHHHHHhHcC--CC
Q 042426 80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFDD--AFNYKEEPDLDAALNRCFP--EG 150 (270)
Q Consensus 80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~ 150 (270)
.|.+++|+||++ ++|.++++.+...|++|+...+++. ..+.+.++.|... ..|..+.++....+.+... +.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467899999986 8999999888888999999887642 2333332334322 2455554344444433322 36
Q ss_pred ccEEEeCCC
Q 042426 151 IDIYFENVG 159 (270)
Q Consensus 151 ~d~v~d~~g 159 (270)
+|++++++|
T Consensus 87 iDilVnnag 95 (260)
T PRK06603 87 FDFLLHGMA 95 (260)
T ss_pred ccEEEEccc
Confidence 999999886
No 287
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.32 E-value=0.0022 Score=51.81 Aligned_cols=80 Identities=14% Similarity=0.238 Sum_probs=51.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH----hCCC---ceeecCCchhHHHHHHhHc--CC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHK----FGFD---DAFNYKEEPDLDAALNRCF--PE 149 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~i~~~~--~~ 149 (270)
++.+++|+||++++|.++++.+...|++|+.+.+ +.++.+.+.++ .+.. ...|..+.++..+.+.+.. .+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 4679999999999999999999899999988864 44444333212 2321 1235555423433333322 23
Q ss_pred CccEEEeCCC
Q 042426 150 GIDIYFENVG 159 (270)
Q Consensus 150 ~~d~v~d~~g 159 (270)
.+|++++++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899999885
No 288
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.32 E-value=0.0016 Score=51.99 Aligned_cols=81 Identities=17% Similarity=0.219 Sum_probs=53.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeecCCchhHHHHHHhHcC--CCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD-D--AFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
.+.+++|+||+|++|..++..+...|++|++++++.++.....+. .+.. . ..|..+.+++.+.+.+... +.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 356899999999999999998888899999999986655443322 2221 1 1244443233333333221 258
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|.++.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999999864
No 289
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.31 E-value=0.0015 Score=53.02 Aligned_cols=81 Identities=23% Similarity=0.394 Sum_probs=57.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CC------ceeecCCchhHH---HHHHhHc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG---FD------DAFNYKEEPDLD---AALNRCF 147 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g---~~------~vi~~~~~~~~~---~~i~~~~ 147 (270)
.|..++|+|++.++|.+++..+...|++|+.+.+++++.+...+++. .. .+.|.++.++.. +...+..
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~ 86 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF 86 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999988766654432 11 233444431222 2233333
Q ss_pred CCCccEEEeCCCc
Q 042426 148 PEGIDIYFENVGG 160 (270)
Q Consensus 148 ~~~~d~v~d~~g~ 160 (270)
.|+.|+.+++.|.
T Consensus 87 ~GkidiLvnnag~ 99 (270)
T KOG0725|consen 87 FGKIDILVNNAGA 99 (270)
T ss_pred CCCCCEEEEcCCc
Confidence 4579999998884
No 290
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.31 E-value=0.0013 Score=49.12 Aligned_cols=78 Identities=21% Similarity=0.316 Sum_probs=51.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHHHHHh---CCC-ce--eecCCchhHHHHHHhHc--CCCc
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGC-YVVGSARS--KEKVDLLKHKF---GFD-DA--FNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~--~~~~~~~~~~~---g~~-~v--i~~~~~~~~~~~i~~~~--~~~~ 151 (270)
+++|+||++++|...++.+...|. +|+.+.++ .++.+.+.+++ +.. .+ .|..+.++....+.+.. .+.+
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~l 81 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPL 81 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 689999999999999988887776 78888887 45555443233 321 11 34444434444444433 1369
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (167)
T PF00106_consen 82 DILINNAGI 90 (167)
T ss_dssp SEEEEECSC
T ss_pred ccccccccc
Confidence 999999984
No 291
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.31 E-value=0.0045 Score=51.46 Aligned_cols=99 Identities=19% Similarity=0.264 Sum_probs=68.6
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcC
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFP 148 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~ 148 (270)
+...++++++||..|+ |.|..++.+++..+. .|+++..+++-.+.+++ +.|.+++..... +..+.+...
T Consensus 74 ~~L~i~~g~~VLDIG~--GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g--D~~~~~~~~-- 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG--DGYYGVPEF-- 147 (322)
T ss_pred HhcCCCCCCEEEEEeC--CccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--Chhhccccc--
Confidence 3456788999999995 479999999998764 69999999887666653 356554332222 333222211
Q ss_pred CCccEEEeCCCcc-hHHHHHHccccCCEEEE
Q 042426 149 EGIDIYFENVGGK-MLDAVLLNMRICGHIAV 178 (270)
Q Consensus 149 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~ 178 (270)
+.||+|+.+.+.. .....++.|+++|+++.
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv 178 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIV 178 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEE
Confidence 2599999987753 44567889999999876
No 292
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.31 E-value=0.0026 Score=51.48 Aligned_cols=81 Identities=22% Similarity=0.274 Sum_probs=54.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
.+.+++|+|+++++|..++..+...|++|+++.+++++.+.+.+.+ +.. ...|..+..+....+.+... +++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 4578999999999999999888889999999998887665544233 322 12344443233333333221 368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|.++.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999973
No 293
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.30 E-value=0.0022 Score=51.75 Aligned_cols=104 Identities=12% Similarity=0.082 Sum_probs=66.1
Q ss_pred CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHhCCCce--eecCCchhHHHHHHhHc--CCC
Q 042426 80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKEK---VDLLKHKFGFDDA--FNYKEEPDLDAALNRCF--PEG 150 (270)
Q Consensus 80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~~---~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~--~~~ 150 (270)
.|.+++|+||+ +++|.++++.+...|++|+++.++.+. .+.+.++++.... .|..+.++..+.+.+.. .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 36789999997 499999999998899999999887543 3333334443222 34444423333333322 146
Q ss_pred ccEEEeCCCcc---------------h---------------HHHHHHccccCCEEEEEcccc
Q 042426 151 IDIYFENVGGK---------------M---------------LDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 151 ~d~v~d~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~ 183 (270)
+|++++++|.. . .+..+..++.+|+++.+++..
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 89999998731 0 233555666678888876643
No 294
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.002 Score=51.80 Aligned_cols=80 Identities=19% Similarity=0.187 Sum_probs=52.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
+.+++|+|+++++|.++++.+...|++|++++++.+ ..+.+.++ .+.. ...|..++.+..+.+.+.. .+.+
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 87 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGAL 87 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999999999999999987643 22322212 2321 1234444423333333322 2368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++++.|.
T Consensus 88 d~li~~ag~ 96 (254)
T PRK06114 88 TLAVNAAGI 96 (254)
T ss_pred CEEEECCCC
Confidence 999999983
No 295
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0049 Score=49.43 Aligned_cols=105 Identities=20% Similarity=0.194 Sum_probs=64.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHh---CCC---ceeecCCchh---HHHHHHhH---
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHKF---GFD---DAFNYKEEPD---LDAALNRC--- 146 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~~---g~~---~vi~~~~~~~---~~~~i~~~--- 146 (270)
.+.+++|+|+++++|.++++.+...|++|++.. ++.++.+.+.+++ +.. ...|..+..+ +.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 357899999999999999999999999998875 4545444332222 221 1123333212 22222221
Q ss_pred -cC-CCccEEEeCCCcc-----------hH---------------HHHHHccccCCEEEEEccccc
Q 042426 147 -FP-EGIDIYFENVGGK-----------ML---------------DAVLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 147 -~~-~~~d~v~d~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 184 (270)
.. +++|++++++|.. .+ +.++..+...|+++.+++...
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 12 2699999998731 01 234555666799999887654
No 296
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0017 Score=52.14 Aligned_cols=75 Identities=19% Similarity=0.296 Sum_probs=51.5
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--D-DAFNYKEEPDLDAALNRCF--PEGIDIY 154 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~vi~~~~~~~~~~~i~~~~--~~~~d~v 154 (270)
.+.+++|+|++|++|..+++.+...|++|++++++.++ . ..+. . ...|..+..++.+.+.+.. .+.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 36789999999999999999998899999999987654 1 2222 1 2235444423333333321 1368999
Q ss_pred EeCCC
Q 042426 155 FENVG 159 (270)
Q Consensus 155 ~d~~g 159 (270)
|.+.|
T Consensus 80 i~~ag 84 (252)
T PRK07856 80 VNNAG 84 (252)
T ss_pred EECCC
Confidence 99987
No 297
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0038 Score=49.75 Aligned_cols=77 Identities=22% Similarity=0.316 Sum_probs=52.1
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC-ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-FD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.+++|+||+|++|..++..+...|++|+++++++++.+.+.+... .. ...|..+.+++.+.+.+. ....|.++.++|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQL-PFIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhc-ccCCCEEEEcCc
Confidence 469999999999999888888889999999999888777652221 11 224555543444444433 223577666665
No 298
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.27 E-value=0.0018 Score=52.06 Aligned_cols=80 Identities=20% Similarity=0.311 Sum_probs=54.8
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
+.+++|+|+++++|..++..+...|++|+.++++.++.+.+.++ .+.. ...|..+.++..+.+.+.. .+++|
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d 90 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVD 90 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 67899999999999999998888999999999887766554322 2322 1245555423333333321 13689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
+++.+.|.
T Consensus 91 ~li~~ag~ 98 (255)
T PRK06113 91 ILVNNAGG 98 (255)
T ss_pred EEEECCCC
Confidence 99999873
No 299
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.27 E-value=0.005 Score=45.40 Aligned_cols=92 Identities=22% Similarity=0.270 Sum_probs=62.4
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426 77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE 156 (270)
Q Consensus 77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d 156 (270)
..-.|.+++|.|- |-+|.-.++.++.+|++|+++..++-+.-.+. .-|.. +. ...+.+. ..|+++.
T Consensus 19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~~-----~adi~vt 84 (162)
T PF00670_consen 19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEALR-----DADIFVT 84 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHTT-----T-SEEEE
T ss_pred eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHHh-----hCCEEEE
Confidence 3456889999997 99999999999999999999999887666555 55653 22 3333333 3899999
Q ss_pred CCCcc--hHHHHHHccccCCEEEEEccc
Q 042426 157 NVGGK--MLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 157 ~~g~~--~~~~~~~~l~~~G~~v~~g~~ 182 (270)
++|.. .....+..|+++..+..+|..
T Consensus 85 aTG~~~vi~~e~~~~mkdgail~n~Gh~ 112 (162)
T PF00670_consen 85 ATGNKDVITGEHFRQMKDGAILANAGHF 112 (162)
T ss_dssp -SSSSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred CCCCccccCHHHHHHhcCCeEEeccCcC
Confidence 99985 346888889998888887763
No 300
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.005 Score=50.65 Aligned_cols=105 Identities=16% Similarity=0.186 Sum_probs=64.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEG 150 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~ 150 (270)
.+.++||+|++|++|..+++.+...|++|+++.++.. ..+.+.+. .+.. ...|..+...+.+.+.+.. .++
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3678999999999999999988888999999987643 22222212 2322 1234444323333333221 136
Q ss_pred ccEEEeCCCcc----h-----------------------HHHHHHccccCCEEEEEccccc
Q 042426 151 IDIYFENVGGK----M-----------------------LDAVLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 151 ~d~v~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 184 (270)
+|+++.++|.. . ++.++..+++.|+++.++....
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~ 185 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG 185 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 89999988731 0 1223444566789998876543
No 301
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.25 E-value=0.0025 Score=47.89 Aligned_cols=99 Identities=21% Similarity=0.218 Sum_probs=65.4
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee-cCC---------------chhHHHHHHh
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN-YKE---------------EPDLDAALNR 145 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~-~~~---------------~~~~~~~i~~ 145 (270)
-+|+|+|+ |.+|+.|+++++.+|++++.....+++.+... ..+...+.. +.+ ...+...+.+
T Consensus 21 ~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 21 AKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp -EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred eEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 67999997 99999999999999999999999988888877 666532221 000 0022222322
Q ss_pred HcCCCccEEEeCCC--c---c--hHHHHHHccccCCEEEEEcccc
Q 042426 146 CFPEGIDIYFENVG--G---K--MLDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 146 ~~~~~~d~v~d~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~ 183 (270)
... .+|+++-+.- + + ..+..++.|+++..++.+....
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 211 2799885432 1 1 4578899999999999887643
No 302
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.24 E-value=0.0081 Score=47.85 Aligned_cols=97 Identities=24% Similarity=0.305 Sum_probs=66.0
Q ss_pred cCC--chHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHhCCC-ceeecCCchh---HHHHHHhHcCCCccEEEeC
Q 042426 88 AAS--GAVGQLVGQFVKLVGCYVVGSARSKEK----VDLLKHKFGFD-DAFNYKEEPD---LDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 88 ga~--g~vG~~ai~la~~~g~~v~~~~~~~~~----~~~~~~~~g~~-~vi~~~~~~~---~~~~i~~~~~~~~d~v~d~ 157 (270)
|++ +++|.++++.+...|++|+++.++.++ .+.+.++.+.. ...|..++++ +.+.+.+..+|++|+++++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 455 899999999999999999999999887 45555456654 2234444423 3333444444679999987
Q ss_pred CCcch------------------------------HHHHHHccccCCEEEEEccccc
Q 042426 158 VGGKM------------------------------LDAVLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 158 ~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~~ 184 (270)
.+... .+.+.+.++++|.++.++....
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~ 137 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAA 137 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGG
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhh
Confidence 75310 2456667888999998876543
No 303
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0023 Score=52.00 Aligned_cols=78 Identities=19% Similarity=0.202 Sum_probs=52.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeecCCchhHHHHHHhHc--CCCccEE
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-D--AFNYKEEPDLDAALNRCF--PEGIDIY 154 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d~v 154 (270)
+++|+|++|++|..+++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.... .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999988888999999999887765543222 222 1 124444323333332221 1368999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
+.++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999884
No 304
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.22 E-value=0.0032 Score=54.11 Aligned_cols=75 Identities=28% Similarity=0.344 Sum_probs=50.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFPEGIDIYFE 156 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~v~d 156 (270)
.+.+++|+||+|++|.++++.+...|++|+++++++++.+...+..+.. ...|..+.++ +.+.. +++|++++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~----v~~~l-~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAA----LAELL-EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHH----HHHHh-CCCCEEEE
Confidence 3679999999999999999988889999999998876654322111111 1134444312 22222 25999999
Q ss_pred CCC
Q 042426 157 NVG 159 (270)
Q Consensus 157 ~~g 159 (270)
++|
T Consensus 252 nAG 254 (406)
T PRK07424 252 NHG 254 (406)
T ss_pred CCC
Confidence 887
No 305
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.22 E-value=0.003 Score=50.82 Aligned_cols=79 Identities=13% Similarity=0.148 Sum_probs=52.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFE 156 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d 156 (270)
+.+++|+|+++++|..+++.+...|++|+++.++. +..+.++ ..+.. ...|..+..+..+.+.+.. .+++|+++.
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57899999999999999999988999998876543 3444444 32332 2235555423433333322 236899999
Q ss_pred CCCc
Q 042426 157 NVGG 160 (270)
Q Consensus 157 ~~g~ 160 (270)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06463 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9873
No 306
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.21 E-value=0.0081 Score=48.04 Aligned_cols=103 Identities=17% Similarity=0.221 Sum_probs=63.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHH----HHHHHhCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVD----LLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EG 150 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~----~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~ 150 (270)
+.++||+|++|++|..+++.+...|++++...++ .++.. .++ +.+.. ...|..+..+....+.+... ++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999888899998877643 22222 222 23322 11344443233333333211 36
Q ss_pred ccEEEeCCCcc-----------h---------------HHHHHHccccCCEEEEEccccc
Q 042426 151 IDIYFENVGGK-----------M---------------LDAVLLNMRICGHIAVCGMISQ 184 (270)
Q Consensus 151 ~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~ 184 (270)
+|.+|.+.|.. . .+.+.+.++..|+++.+++...
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 89999999830 0 2334455567789998887554
No 307
>PLN02476 O-methyltransferase
Probab=97.21 E-value=0.0066 Score=49.16 Aligned_cols=105 Identities=16% Similarity=0.146 Sum_probs=73.0
Q ss_pred hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhH
Q 042426 72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRC 146 (270)
Q Consensus 72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~ 146 (270)
+..+.+..+..+||=+| +++|..++.+++.++ .+|+.+..+++..+.+++ +.|..+-+..... +..+.+.+.
T Consensus 110 L~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l 186 (278)
T PLN02476 110 LAMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSM 186 (278)
T ss_pred HHHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHH
Confidence 33445667788999998 788999999998774 479999999887777763 3466433444333 444544443
Q ss_pred c----CCCccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426 147 F----PEGIDIYFENVGG----KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 147 ~----~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~ 179 (270)
. .+.||+||=-... ..++.++++|++||.++.=
T Consensus 187 ~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D 227 (278)
T PLN02476 187 IQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD 227 (278)
T ss_pred HhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 1 2379998755543 2688899999999998753
No 308
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.21 E-value=0.0032 Score=50.96 Aligned_cols=80 Identities=15% Similarity=0.265 Sum_probs=51.9
Q ss_pred CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCC--ceeecCCchhHHHHHHhHcC--CC
Q 042426 80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFP--EG 150 (270)
Q Consensus 80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~ 150 (270)
.+.+++|+||++ ++|.++++.+...|++|++..+++. ..+.+.++.+.. ...|..+.+++.+.+.+... +.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 467899999975 8999999998889999998887632 223332122221 22355554344444443322 36
Q ss_pred ccEEEeCCC
Q 042426 151 IDIYFENVG 159 (270)
Q Consensus 151 ~d~v~d~~g 159 (270)
+|++++++|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 899999997
No 309
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0033 Score=50.78 Aligned_cols=80 Identities=20% Similarity=0.263 Sum_probs=52.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HhCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH--KFGFD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~--~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
++.+++|+|++|++|..+++.+...|++|+++.++.+..+...+ ..+.. ...|..+..+....+.+.. .+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35789999999999999999998899999999988654333321 12322 1234444323333332221 23689
Q ss_pred EEEeCCC
Q 042426 153 IYFENVG 159 (270)
Q Consensus 153 ~v~d~~g 159 (270)
+++.+.|
T Consensus 85 ~vi~~ag 91 (263)
T PRK08226 85 ILVNNAG 91 (263)
T ss_pred EEEECCC
Confidence 9999888
No 310
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.20 E-value=0.0027 Score=51.12 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=52.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCC--c--eeecCCchhHHHHHHhHc--CCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK----FGFD--D--AFNYKEEPDLDAALNRCF--PEG 150 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~----~g~~--~--vi~~~~~~~~~~~i~~~~--~~~ 150 (270)
+.+++|+|++|++|..+++.+...|++|+.++++..+.+.+.++ .+.. + ..|..+..+....+.+.. .++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999999999999988899999999887765444322 2211 1 124444323333333321 136
Q ss_pred ccEEEeCCC
Q 042426 151 IDIYFENVG 159 (270)
Q Consensus 151 ~d~v~d~~g 159 (270)
+|+++++.|
T Consensus 82 id~vv~~ag 90 (259)
T PRK12384 82 VDLLVYNAG 90 (259)
T ss_pred CCEEEECCC
Confidence 899999987
No 311
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.20 E-value=0.0028 Score=50.70 Aligned_cols=79 Identities=16% Similarity=0.237 Sum_probs=53.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeecCCchhHHHHHHhHc--CCCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-D--AFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.+ +.. . ..|..+..+..+.+.... .+++|
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d 82 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD 82 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999889999999998887765554222 221 1 234444323333333222 13689
Q ss_pred EEEeCCC
Q 042426 153 IYFENVG 159 (270)
Q Consensus 153 ~v~d~~g 159 (270)
+++.+.|
T Consensus 83 ~vi~~ag 89 (250)
T TIGR03206 83 VLVNNAG 89 (250)
T ss_pred EEEECCC
Confidence 9999997
No 312
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.19 E-value=0.0025 Score=51.57 Aligned_cols=81 Identities=6% Similarity=0.120 Sum_probs=51.7
Q ss_pred CCcEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCC--ceeecCCchhHHHHHHhHc--CCC
Q 042426 80 KGEYVYVSAA--SGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK---HKFGFD--DAFNYKEEPDLDAALNRCF--PEG 150 (270)
Q Consensus 80 ~g~~vlI~ga--~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~---~~~g~~--~vi~~~~~~~~~~~i~~~~--~~~ 150 (270)
++.+++|+|| ++++|.+.++.+...|++|+++.+.+...+.++ ++.+.. ...|..+.++..+.+.+.. .++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999996 579999999999889999998876543333332 122322 2234555434444443332 236
Q ss_pred ccEEEeCCCc
Q 042426 151 IDIYFENVGG 160 (270)
Q Consensus 151 ~d~v~d~~g~ 160 (270)
+|++++++|.
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999999873
No 313
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.18 E-value=0.0035 Score=50.79 Aligned_cols=82 Identities=18% Similarity=0.132 Sum_probs=59.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-ee-------ecCCchhHHHHHHhHc--C
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AF-------NYKEEPDLDAALNRCF--P 148 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi-------~~~~~~~~~~~i~~~~--~ 148 (270)
++--+|+|.|++.++|++....++..|++|.++.++.+++..+++.++... +. |-.+.+.....++..- .
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 444689999999999999999999999999999999999998887776531 11 2222211222333321 1
Q ss_pred CCccEEEeCCCc
Q 042426 149 EGIDIYFENVGG 160 (270)
Q Consensus 149 ~~~d~v~d~~g~ 160 (270)
+.+|.+|.|+|.
T Consensus 111 ~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 111 GPIDNLFCCAGV 122 (331)
T ss_pred CCcceEEEecCc
Confidence 368999999994
No 314
>PRK06398 aldose dehydrogenase; Validated
Probab=97.18 E-value=0.00088 Score=54.05 Aligned_cols=74 Identities=16% Similarity=0.181 Sum_probs=50.5
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHc--CCCccEEEeCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF--PEGIDIYFENV 158 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~--~~~~d~v~d~~ 158 (270)
|.+++|+|+++++|..+++.+...|++|+++++++.+...+. ....|..++.++.+.+.+.. .+.+|+++++.
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~A 80 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNNA 80 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 578999999999999999999999999999997754322111 11234544423333333322 13689999988
Q ss_pred C
Q 042426 159 G 159 (270)
Q Consensus 159 g 159 (270)
|
T Consensus 81 g 81 (258)
T PRK06398 81 G 81 (258)
T ss_pred C
Confidence 7
No 315
>PRK05599 hypothetical protein; Provisional
Probab=97.18 E-value=0.0024 Score=51.12 Aligned_cols=77 Identities=14% Similarity=0.150 Sum_probs=51.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC----ceeecCCchhHHHHHHhHc--CCCccE
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD----DAFNYKEEPDLDAALNRCF--PEGIDI 153 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~----~vi~~~~~~~~~~~i~~~~--~~~~d~ 153 (270)
+++|+|+++++|.+.++.+. .|.+|+++.+++++.+.+.+++ |.. ...|..+.++..+.+.+.. .+++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 58999999999998888776 5999999999988777664333 322 1234444423333333322 246899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
++.+.|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9998873
No 316
>PRK07069 short chain dehydrogenase; Validated
Probab=97.17 E-value=0.0024 Score=51.14 Aligned_cols=76 Identities=16% Similarity=0.298 Sum_probs=51.4
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhC----CC----ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHKFG----FD----DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~~g----~~----~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
++|+|++|++|..+++.+...|++|+++.++ .++.+.+.+++. .. ...|..+.+++.+.+.+.. .+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999999988889999999987 555554443332 11 1235555424444333322 13689
Q ss_pred EEEeCCC
Q 042426 153 IYFENVG 159 (270)
Q Consensus 153 ~v~d~~g 159 (270)
+++.++|
T Consensus 82 ~vi~~ag 88 (251)
T PRK07069 82 VLVNNAG 88 (251)
T ss_pred EEEECCC
Confidence 9999987
No 317
>PRK12743 oxidoreductase; Provisional
Probab=97.17 E-value=0.0033 Score=50.63 Aligned_cols=80 Identities=16% Similarity=0.285 Sum_probs=51.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCC-c--eeecCCchhHHHHHHhHcC--CCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKH---KFGFD-D--AFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
+.+++|+||++++|..+++.+...|++|+.+.+ +.++.+.+.+ ..+.. + ..|..+.++....+.+... +.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999988764 4444433322 23432 1 2355544233333332211 358
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999998873
No 318
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.17 E-value=0.0031 Score=49.34 Aligned_cols=100 Identities=19% Similarity=0.220 Sum_probs=66.7
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcC
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFP 148 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~ 148 (270)
....++++++||-+| +|.|..+..+++..+ .+|+.+..+++-.+.+++.+ |..++ ..... +...... ..
T Consensus 70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v-~~~~g-d~~~~~~--~~ 143 (212)
T PRK13942 70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNV-EVIVG-DGTLGYE--EN 143 (212)
T ss_pred HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC-CcccCCC--cC
Confidence 456788999999998 677888888888775 59999999988777776433 43322 11111 1111110 11
Q ss_pred CCccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426 149 EGIDIYFENVGG-KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 149 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 179 (270)
+.||+|+-.... .......+.|+++|+++..
T Consensus 144 ~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 144 APYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred CCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 369998754433 4556788899999998874
No 319
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.16 E-value=0.0026 Score=51.39 Aligned_cols=81 Identities=15% Similarity=0.243 Sum_probs=52.6
Q ss_pred CCcEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcC--CC
Q 042426 80 KGEYVYVSAA--SGAVGQLVGQFVKLVGCYVVGSARS---KEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFP--EG 150 (270)
Q Consensus 80 ~g~~vlI~ga--~g~vG~~ai~la~~~g~~v~~~~~~---~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~ 150 (270)
++.+++|+|| ++++|.++++.+...|++|+++.+. .++.+.+.++++.. ...|..++++..+.+.+... ++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 3678999996 5799999999888899999987643 33444443344432 22455554344444443322 47
Q ss_pred ccEEEeCCCc
Q 042426 151 IDIYFENVGG 160 (270)
Q Consensus 151 ~d~v~d~~g~ 160 (270)
+|++++++|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999998863
No 320
>PRK09135 pteridine reductase; Provisional
Probab=97.15 E-value=0.0035 Score=50.01 Aligned_cols=80 Identities=11% Similarity=0.167 Sum_probs=51.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh----CCC---ceeecCCchhHHHHHHhHc--CC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHKF----GFD---DAFNYKEEPDLDAALNRCF--PE 149 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~--~~ 149 (270)
.+.+++|+|++|++|..+++.+...|++|++++++ .++.+.+.+.+ +.. ...|..+..+....+.+.. -+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 34689999999999999999888889999999975 33333332122 111 1235554423333333221 13
Q ss_pred CccEEEeCCC
Q 042426 150 GIDIYFENVG 159 (270)
Q Consensus 150 ~~d~v~d~~g 159 (270)
++|++|.++|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 5899999997
No 321
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.15 E-value=0.0028 Score=49.27 Aligned_cols=111 Identities=19% Similarity=0.238 Sum_probs=68.8
Q ss_pred ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCce-eec
Q 042426 60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKH---KFGFDDA-FNY 133 (270)
Q Consensus 60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~v-i~~ 133 (270)
.+..+...|. ++ +...+++|++||-+| +|.|..++-+++..|- .|+.+.+.++-.+.+++ .++.+++ +..
T Consensus 54 ~is~P~~~a~-~l-~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~ 129 (209)
T PF01135_consen 54 TISAPSMVAR-ML-EALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVV 129 (209)
T ss_dssp EE--HHHHHH-HH-HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEE
T ss_pred echHHHHHHH-HH-HHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEE
Confidence 3333444443 33 556799999999999 7889999999998875 68999888765555443 4555433 222
Q ss_pred CCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEE
Q 042426 134 KEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 134 ~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~ 179 (270)
.+. ...+.+. +.||.|+-+.+-+ .-...++.|+++|++|..
T Consensus 130 gdg---~~g~~~~--apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 130 GDG---SEGWPEE--APFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp S-G---GGTTGGG---SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred cch---hhccccC--CCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 221 1111111 2699999887765 346788899999999973
No 322
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.012 Score=48.03 Aligned_cols=100 Identities=20% Similarity=0.204 Sum_probs=63.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc-CCCccEE
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF-PEGIDIY 154 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~-~~~~d~v 154 (270)
.+++|.|+ |++|.++++.+. .|++|+++++++++.+.+.+++ +.. ...|..+.++..+.+.+.. .+++|++
T Consensus 3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 57899997 799999998885 7999999999877665554333 322 1235555433444433321 2469999
Q ss_pred EeCCCcc----h---------------HHHHHHccccCCEEEEEcccc
Q 042426 155 FENVGGK----M---------------LDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 155 ~d~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~ 183 (270)
++++|.. . ++.....+..+|+++.+++..
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 9999841 1 233444555667777665543
No 323
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.14 E-value=0.0035 Score=50.33 Aligned_cols=79 Identities=22% Similarity=0.302 Sum_probs=50.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCC-c--eeecCCchhHHHHHHhHc--CCCccE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE--KVDLLKHKFGFD-D--AFNYKEEPDLDAALNRCF--PEGIDI 153 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~--~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d~ 153 (270)
|.+++|+|+++++|.++++.+...|++|+.+.++.. ..+.++ +.+.. . ..|..+.++..+.+.+.. .+++|+
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 578999999999999999999999999998765432 223333 33322 1 134444323333333321 136899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
+++++|.
T Consensus 89 li~~Ag~ 95 (253)
T PRK08993 89 LVNNAGL 95 (253)
T ss_pred EEECCCC
Confidence 9999973
No 324
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.14 E-value=0.0041 Score=49.82 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=51.8
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCC---ceeecCCchhHHHHHHh---HcCCCccE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNR---CFPEGIDI 153 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~---~~~~~~d~ 153 (270)
+.+++|+||+|++|..++..+...|++|+.+.+ +.++.+.+.++++.. ...|..+.+++.+.+.+ ..++++|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~ 84 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT 84 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 468999999999999999998889999988654 455555554345422 11344444233333333 22224899
Q ss_pred EEeCCC
Q 042426 154 YFENVG 159 (270)
Q Consensus 154 v~d~~g 159 (270)
++.+.|
T Consensus 85 li~~ag 90 (253)
T PRK08642 85 VVNNAL 90 (253)
T ss_pred EEECCC
Confidence 999875
No 325
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.13 E-value=0.0027 Score=58.45 Aligned_cols=80 Identities=20% Similarity=0.296 Sum_probs=56.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC----ceeecCCchhHHHHHHhHc--CCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD----DAFNYKEEPDLDAALNRCF--PEG 150 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~----~vi~~~~~~~~~~~i~~~~--~~~ 150 (270)
+.++||+|++|++|.++++.+...|++|++++++.++.+.+.+++ +.. ...|..+..++.+.+.+.. .++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~ 493 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGG 493 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 678999999999999999999889999999999887766554333 221 1234444423444444332 236
Q ss_pred ccEEEeCCCc
Q 042426 151 IDIYFENVGG 160 (270)
Q Consensus 151 ~d~v~d~~g~ 160 (270)
+|++++++|.
T Consensus 494 iDilV~nAG~ 503 (676)
T TIGR02632 494 VDIVVNNAGI 503 (676)
T ss_pred CcEEEECCCC
Confidence 9999999983
No 326
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0041 Score=51.55 Aligned_cols=80 Identities=19% Similarity=0.236 Sum_probs=51.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHH---HhCCC---ceeecCCchhHHHHH
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK----------EKVDLLKH---KFGFD---DAFNYKEEPDLDAAL 143 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~----------~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i 143 (270)
.+.+++|+|+++++|+++++.+...|++|++++++. ++.+.+.+ ..|.. ...|..+..+....+
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 367999999999999999999999999999998763 23333321 22321 123444442333333
Q ss_pred HhHc--CCCccEEEeCC-C
Q 042426 144 NRCF--PEGIDIYFENV-G 159 (270)
Q Consensus 144 ~~~~--~~~~d~v~d~~-g 159 (270)
.+.. .+++|++++++ |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 3322 13689999988 5
No 327
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.12 E-value=0.0083 Score=48.01 Aligned_cols=74 Identities=18% Similarity=0.288 Sum_probs=50.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIYF 155 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v~ 155 (270)
+.++||+|++|++|..+++.+...|++|+++.++. .. ..+.. ...|..+.+.+.+.+.+... +.+|+++
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV 81 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 57899999999999999999888999999999775 22 22221 12344444234443333221 3589999
Q ss_pred eCCCc
Q 042426 156 ENVGG 160 (270)
Q Consensus 156 d~~g~ 160 (270)
.+.|.
T Consensus 82 ~~ag~ 86 (252)
T PRK08220 82 NAAGI 86 (252)
T ss_pred ECCCc
Confidence 99874
No 328
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.12 E-value=0.0054 Score=50.09 Aligned_cols=93 Identities=18% Similarity=0.166 Sum_probs=61.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV 158 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~ 158 (270)
.+.+++|+|+ |++|.+++..+...| .+|+++.|+.++.+.+.++++....+.. .. +..+.+ ..+|+|++|+
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~-----~~~DivInaT 193 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEEL-----ADFDLIINAT 193 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhcc-----ccCCEEEECC
Confidence 4678999997 999999999999999 5999999999888777655543210111 10 111111 2489999998
Q ss_pred CcchH------HHHHHccccCCEEEEEc
Q 042426 159 GGKML------DAVLLNMRICGHIAVCG 180 (270)
Q Consensus 159 g~~~~------~~~~~~l~~~G~~v~~g 180 (270)
..... ......+.++..++.+-
T Consensus 194 p~g~~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 194 SAGMSGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred cCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 74321 12235566666666653
No 329
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.11 E-value=0.008 Score=45.91 Aligned_cols=96 Identities=13% Similarity=0.121 Sum_probs=64.2
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCcc
Q 042426 77 SPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGID 152 (270)
Q Consensus 77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d 152 (270)
.++++.+||-.| +|.|..++.+++.. +.+|++++.+++..+.+++ +.+.+. +..... +..+ +.. .+.||
T Consensus 42 ~l~~g~~VLDiG--cGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fD 114 (187)
T PRK00107 42 YLPGGERVLDVG--SGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFD 114 (187)
T ss_pred hcCCCCeEEEEc--CCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCcc
Confidence 355688999998 56677777777644 5799999999887766653 344443 333332 3332 211 23699
Q ss_pred EEEeCCCc---chHHHHHHccccCCEEEEE
Q 042426 153 IYFENVGG---KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 153 ~v~d~~g~---~~~~~~~~~l~~~G~~v~~ 179 (270)
+|+-.... ..+..+.++|+++|+++.+
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~ 144 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPGGRFLAL 144 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence 99875433 3677889999999999976
No 330
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0055 Score=49.88 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=53.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeecCCchhHHHHHHhHc--CCCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD---AFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
..+++|+||+|++|..+++.+...|++|++++++.++.+.+.++ .+... ..|..+..+..+.+.+.. .+++|
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE 89 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 35899999999999999998888899999999887665544322 23221 124444423333333321 13689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
++|.++|.
T Consensus 90 ~vi~~Ag~ 97 (274)
T PRK07775 90 VLVSGAGD 97 (274)
T ss_pred EEEECCCc
Confidence 99999874
No 331
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.10 E-value=0.0045 Score=49.46 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=53.8
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--ce--eecC--CchhHHHHHHhHcC
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD--DA--FNYK--EEPDLDAALNRCFP 148 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v--i~~~--~~~~~~~~i~~~~~ 148 (270)
..++.+++|+|++|++|...++.+...|++|++++++.++.+.+.+++ +.. .+ .|.. +.+++.+.+.....
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 446789999999999999999988888999999999887655443232 221 11 2222 22133332222221
Q ss_pred --CCccEEEeCCCc
Q 042426 149 --EGIDIYFENVGG 160 (270)
Q Consensus 149 --~~~d~v~d~~g~ 160 (270)
+.+|.++.+++.
T Consensus 89 ~~~~id~vi~~Ag~ 102 (247)
T PRK08945 89 QFGRLDGVLHNAGL 102 (247)
T ss_pred HhCCCCEEEECCcc
Confidence 258999998863
No 332
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0024 Score=50.54 Aligned_cols=74 Identities=26% Similarity=0.264 Sum_probs=51.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPE-GIDIYFENV 158 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~ 158 (270)
+.+++|+|++|++|..+++.+...|++|+++.++.++ . .... ...|..+.+++.+.+.+.... ++|+++.+.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 4689999999999999999998999999999987654 1 1111 234555542344444433322 689999998
Q ss_pred Cc
Q 042426 159 GG 160 (270)
Q Consensus 159 g~ 160 (270)
|.
T Consensus 77 g~ 78 (234)
T PRK07577 77 GI 78 (234)
T ss_pred CC
Confidence 74
No 333
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.004 Score=50.69 Aligned_cols=81 Identities=21% Similarity=0.317 Sum_probs=51.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHH---HhCCC---ceeecCCchhHHHHHHhH
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-------VDLLKH---KFGFD---DAFNYKEEPDLDAALNRC 146 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-------~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~ 146 (270)
.+.+++|+||+|++|..+++.+...|++|++++++.+. .+.+.+ ..+.. ...|..+.....+.+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 35689999999999999999888899999999986532 221111 22332 123555442333333332
Q ss_pred cC--CCccEEEeCCCc
Q 042426 147 FP--EGIDIYFENVGG 160 (270)
Q Consensus 147 ~~--~~~d~v~d~~g~ 160 (270)
.. +.+|++|+++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 11 368999999873
No 334
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.08 E-value=0.005 Score=49.31 Aligned_cols=79 Identities=16% Similarity=0.199 Sum_probs=53.6
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCccE
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGIDI 153 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~ 153 (270)
.++||+|++|++|..++..+...|++|++++++.++.+.+.+++ +.. ...|..+..++...+.+.. .++.|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 47999999999999999988888999999999887776665332 221 1235554423333333321 125899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
++.+.+.
T Consensus 82 vi~~a~~ 88 (255)
T TIGR01963 82 LVNNAGI 88 (255)
T ss_pred EEECCCC
Confidence 9988863
No 335
>PRK05855 short chain dehydrogenase; Validated
Probab=97.07 E-value=0.0029 Score=57.18 Aligned_cols=80 Identities=19% Similarity=0.164 Sum_probs=55.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.++. |.. ...|..+.+...+.+.+.. .+.+|
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 394 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPD 394 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCc
Confidence 568999999999999999988889999999999887766554222 321 1235555423333333322 23689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
++++++|.
T Consensus 395 ~lv~~Ag~ 402 (582)
T PRK05855 395 IVVNNAGI 402 (582)
T ss_pred EEEECCcc
Confidence 99999984
No 336
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.07 E-value=0.0051 Score=49.20 Aligned_cols=81 Identities=15% Similarity=0.233 Sum_probs=51.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEG 150 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~ 150 (270)
++.+++|+||+|++|+.++..+...|++|++. .++.++.+.+.++ .+.. ...|..+..+....+.+.. .++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35689999999999999999999999998764 5565554443322 2332 1134444323333333221 136
Q ss_pred ccEEEeCCCc
Q 042426 151 IDIYFENVGG 160 (270)
Q Consensus 151 ~d~v~d~~g~ 160 (270)
+|+++.+.|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 337
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.07 E-value=0.0072 Score=49.98 Aligned_cols=38 Identities=8% Similarity=0.239 Sum_probs=32.1
Q ss_pred CCcEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 042426 80 KGEYVYVSAA--SGAVGQLVGQFVKLVGCYVVGSARSKEKV 118 (270)
Q Consensus 80 ~g~~vlI~ga--~g~vG~~ai~la~~~g~~v~~~~~~~~~~ 118 (270)
.|.++||+|+ ++|+|.++++.+...|++|++ ++..+++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 4789999999 799999999999999999988 5454443
No 338
>PRK08264 short chain dehydrogenase; Validated
Probab=97.07 E-value=0.004 Score=49.43 Aligned_cols=75 Identities=24% Similarity=0.316 Sum_probs=51.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC-c--eeecCCchhHHHHHHhHcCCCccEEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD-D--AFNYKEEPDLDAALNRCFPEGIDIYF 155 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~~~~d~v~ 155 (270)
.+.+++|+||+|++|..+++.+...|+ +|+++.++.++.+. .+.. . ..|..+.+++.+.+.+. +.+|+++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEE
Confidence 356899999999999999999999999 99999988765442 2221 1 23444442333333322 2489999
Q ss_pred eCCCc
Q 042426 156 ENVGG 160 (270)
Q Consensus 156 d~~g~ 160 (270)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 99875
No 339
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.06 E-value=0.007 Score=47.07 Aligned_cols=101 Identities=14% Similarity=0.151 Sum_probs=65.9
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcC
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFP 148 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~ 148 (270)
+...++++++||-.| +|.|..++.+++..+ .+|+.+..+++-.+.+++. .+....+..... +..+.+.. .
T Consensus 66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d~~~~~~~--~ 140 (205)
T PRK13944 66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-DGKRGLEK--H 140 (205)
T ss_pred HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-CcccCCcc--C
Confidence 445678899999998 677888888888764 5999999998877666533 343211111111 22211111 1
Q ss_pred CCccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426 149 EGIDIYFENVGG-KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 149 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 179 (270)
+.||.|+-+... .......+.|+++|+++..
T Consensus 141 ~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 141 APFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred CCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 369998876554 3456778899999998763
No 340
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.06 E-value=0.004 Score=49.60 Aligned_cols=80 Identities=25% Similarity=0.355 Sum_probs=52.0
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
+.+++|+|++|++|..++..+...|++|+++ .+++++.+.+.+.+ +.. ...|..+..++.+.+..... +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4589999999999999998888889999998 87776655444232 221 12344444233332322211 258
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|.+|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998874
No 341
>PLN00015 protochlorophyllide reductase
Probab=97.05 E-value=0.0044 Score=51.43 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=52.1
Q ss_pred EEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC--C----ceeecCCchhHHHHHHhHc--CCCccEEE
Q 042426 85 YVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGF--D----DAFNYKEEPDLDAALNRCF--PEGIDIYF 155 (270)
Q Consensus 85 lI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~--~----~vi~~~~~~~~~~~i~~~~--~~~~d~v~ 155 (270)
+|+|+++++|..+++.+...| ++|++++++.++.+.+.++++. . ...|..+.++....+.+.. .+++|+++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999998888889 8999999988877665545532 1 1235555423333333322 23689999
Q ss_pred eCCC
Q 042426 156 ENVG 159 (270)
Q Consensus 156 d~~g 159 (270)
+++|
T Consensus 81 nnAG 84 (308)
T PLN00015 81 CNAA 84 (308)
T ss_pred ECCC
Confidence 9887
No 342
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.05 E-value=0.0037 Score=50.47 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=64.6
Q ss_pred CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHHHhCCC--ceeecCCchhHHHHHHhHc--
Q 042426 80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSK------EKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCF-- 147 (270)
Q Consensus 80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~------~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~-- 147 (270)
.+.+++|+|++ +++|.++++.+...|++|+++.++. +..+.+.++.+.. ...|..+.++..+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 36789999985 7999999999988999998876432 2233333122211 1235555433333333322
Q ss_pred CCCccEEEeCCCcc--------h----------------------HHHHHHccccCCEEEEEcccc
Q 042426 148 PEGIDIYFENVGGK--------M----------------------LDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 148 ~~~~d~v~d~~g~~--------~----------------------~~~~~~~l~~~G~~v~~g~~~ 183 (270)
.+++|++++++|.. . .+..+..+..+|+++.+++..
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 13699999998731 1 134555666779999887654
No 343
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=97.05 E-value=0.011 Score=46.94 Aligned_cols=104 Identities=16% Similarity=0.141 Sum_probs=71.2
Q ss_pred hhhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHc
Q 042426 73 HELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCF 147 (270)
Q Consensus 73 ~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~ 147 (270)
..+.+..++.+||-.| +++|..++.+++.++ .+|+.+..+++..+.+++ +.|...-+..... +..+.+.+..
T Consensus 61 ~~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l~ 137 (234)
T PLN02781 61 SMLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQLL 137 (234)
T ss_pred HHHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHH
Confidence 3455667788999998 788888888888764 499999999988777763 3454333333333 4445444432
Q ss_pred ----CCCccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426 148 ----PEGIDIYFENVGG----KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 148 ----~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~ 179 (270)
.+.||+||--... ..+..+++++++||.++.-
T Consensus 138 ~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d 177 (234)
T PLN02781 138 NNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD 177 (234)
T ss_pred hCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 2379999855432 3678889999999988753
No 344
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.04 E-value=0.0056 Score=50.69 Aligned_cols=102 Identities=17% Similarity=0.254 Sum_probs=69.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Cc----eeecCCch---hHHHHHHhHcC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF----DD----AFNYKEEP---DLDAALNRCFP 148 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~----~~----vi~~~~~~---~~~~~i~~~~~ 148 (270)
.|-+++|+|+++|+|..++.-+...|++|+.++|+.++.+.+++++.. .. ..|-.+.. .|.+.+.+. .
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~-~ 112 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK-E 112 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc-C
Confidence 457899999999999999999999999999999998777666655442 12 12333331 233333322 1
Q ss_pred CCccEEEeCCCcc------------------------hHHHHHHccccC--CEEEEEccc
Q 042426 149 EGIDIYFENVGGK------------------------MLDAVLLNMRIC--GHIAVCGMI 182 (270)
Q Consensus 149 ~~~d~v~d~~g~~------------------------~~~~~~~~l~~~--G~~v~~g~~ 182 (270)
+..|+.++++|-- ..+..+..|+.. +|+|.+++.
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~ 172 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI 172 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc
Confidence 2689999988721 134555566554 799988763
No 345
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.03 E-value=0.012 Score=43.98 Aligned_cols=96 Identities=16% Similarity=0.096 Sum_probs=63.5
Q ss_pred cccCchhhhHHHHhhhhcCCCCCcEEEEecCCch-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCch
Q 042426 59 GILGMPGLTAYGGLHELCSPKKGEYVYVSAASGA-VGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEP 137 (270)
Q Consensus 59 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~-vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 137 (270)
.-.|+....+...+.+...--.+.+|+|.|+ |. +|..++..+...|++|+++.++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence 4455555555555544443356789999998 65 699899999999999888886521
Q ss_pred hHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEccc
Q 042426 138 DLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 138 ~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 182 (270)
+..+.+.+ +|+||.+++.+.+ ...+.++++-.++.++.+
T Consensus 80 ~l~~~l~~-----aDiVIsat~~~~i-i~~~~~~~~~viIDla~p 118 (168)
T cd01080 80 NLKEHTKQ-----ADIVIVAVGKPGL-VKGDMVKPGAVVIDVGIN 118 (168)
T ss_pred hHHHHHhh-----CCEEEEcCCCCce-ecHHHccCCeEEEEccCC
Confidence 23333333 8999999987542 222346666666677664
No 346
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0051 Score=56.63 Aligned_cols=80 Identities=23% Similarity=0.312 Sum_probs=55.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
+.+++|+||+|++|..++..+...|++|+++++++++.+.+.+++ +.. ...|..+.++..+.+.+.. .+++|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 568999999999999999988888999999999988776654333 221 1235554423443333321 13689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
++++++|.
T Consensus 451 ~li~~Ag~ 458 (657)
T PRK07201 451 YLVNNAGR 458 (657)
T ss_pred EEEECCCC
Confidence 99999983
No 347
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.002 Score=51.98 Aligned_cols=76 Identities=22% Similarity=0.281 Sum_probs=50.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFE 156 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d 156 (270)
++.+++|+|++|++|..+++.+...|++|++++++.++. .. -... ...|..+.++..+.+.+.. .+++|++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 467999999999999999999988999999999875431 11 0111 1234444423332222221 136899999
Q ss_pred CCC
Q 042426 157 NVG 159 (270)
Q Consensus 157 ~~g 159 (270)
++|
T Consensus 84 ~ag 86 (260)
T PRK06523 84 VLG 86 (260)
T ss_pred CCc
Confidence 987
No 348
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0071 Score=48.68 Aligned_cols=80 Identities=15% Similarity=0.190 Sum_probs=51.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEG 150 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~ 150 (270)
.+.+++|+||+|++|..+++.+...|++|+++.+. .++.+.+.+++ +.. ...|..+..+..+.+.+.. .++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35689999999999999999888899999887653 34443333222 332 1234444423333333321 236
Q ss_pred ccEEEeCCC
Q 042426 151 IDIYFENVG 159 (270)
Q Consensus 151 ~d~v~d~~g 159 (270)
+|+++.+.|
T Consensus 88 iD~vi~~ag 96 (258)
T PRK09134 88 ITLLVNNAS 96 (258)
T ss_pred CCEEEECCc
Confidence 899999987
No 349
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.01 E-value=0.0047 Score=49.06 Aligned_cols=78 Identities=21% Similarity=0.250 Sum_probs=50.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCccE
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGIDI 153 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~ 153 (270)
++||+|++|++|..+++.+...|++|+++.+ ++++.+...++. +.. ...|..+..++.+.+.+.. .+.+|.
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV 81 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence 6899999999999999999889999999887 444443332122 211 1234444423333333221 136899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
+|.+.|.
T Consensus 82 vi~~ag~ 88 (242)
T TIGR01829 82 LVNNAGI 88 (242)
T ss_pred EEECCCC
Confidence 9999973
No 350
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0056 Score=48.81 Aligned_cols=78 Identities=15% Similarity=0.192 Sum_probs=51.6
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-c--eeecCCchhHHHHHHhHcCCCccEE
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD-D--AFNYKEEPDLDAALNRCFPEGIDIY 154 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~--vi~~~~~~~~~~~i~~~~~~~~d~v 154 (270)
.+++|+||+|++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+..+..+.+.+.. ..+|++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence 47999999999999999999888999999999887665543222 111 1 124444323333333321 247999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
+.++|.
T Consensus 81 v~~ag~ 86 (243)
T PRK07102 81 LIAVGT 86 (243)
T ss_pred EECCcC
Confidence 988763
No 351
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=97.00 E-value=0.0031 Score=48.86 Aligned_cols=104 Identities=16% Similarity=0.134 Sum_probs=71.0
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhH--
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRC-- 146 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~-- 146 (270)
...+.....+||-+| +.+|++++.+|+.+ +.+|+.+..+++..+.+++ +.|...-+..... +..+.+.++
T Consensus 39 ~l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~ 115 (205)
T PF01596_consen 39 MLVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELAN 115 (205)
T ss_dssp HHHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHH
T ss_pred HHHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHh
Confidence 334445567899998 88999999999977 4699999999988877763 3455433444333 444444443
Q ss_pred -c-CCCccEEEeCCCc----chHHHHHHccccCCEEEEEc
Q 042426 147 -F-PEGIDIYFENVGG----KMLDAVLLNMRICGHIAVCG 180 (270)
Q Consensus 147 -~-~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g 180 (270)
. .+.||+||=-... ..+..++++|+++|.++.=.
T Consensus 116 ~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN 155 (205)
T PF01596_consen 116 DGEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN 155 (205)
T ss_dssp TTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred ccCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence 2 2369998643332 26788999999999988743
No 352
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=97.00 E-value=0.015 Score=46.40 Aligned_cols=102 Identities=12% Similarity=0.102 Sum_probs=72.2
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHc-
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCF- 147 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~- 147 (270)
.+.+.....+||-+| +.+|.+++.+++.+ +.+|+.+..+++..+.+++ +.|..+-++.... +..+.+.++.
T Consensus 73 ~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l~~ 149 (247)
T PLN02589 73 MLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQMIE 149 (247)
T ss_pred HHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHHHh
Confidence 344555667899998 89999999999877 4599999998887776653 3465444444444 5555555542
Q ss_pred ----CCCccEEEeCCCc----chHHHHHHccccCCEEEE
Q 042426 148 ----PEGIDIYFENVGG----KMLDAVLLNMRICGHIAV 178 (270)
Q Consensus 148 ----~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~ 178 (270)
.+.||+||=-... ..++.++++|++||.++.
T Consensus 150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 2479999754443 267888999999999875
No 353
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.99 E-value=0.023 Score=38.07 Aligned_cols=86 Identities=21% Similarity=0.232 Sum_probs=59.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVG---CYVVGS-ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV 158 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g---~~v~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~ 158 (270)
+|.|+|+ |.+|.+.+.-+...| .+|+.+ .+++++.+.+.++++..... . +..+.+++ .|+||-|+
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~----~-~~~~~~~~-----advvilav 69 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA----D-DNEEAAQE-----ADVVILAV 69 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES----E-EHHHHHHH-----TSEEEE-S
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc----C-ChHHhhcc-----CCEEEEEE
Confidence 4778886 999999999998888 799955 89999998887677753221 1 34444443 89999999
Q ss_pred CcchHHHHHHc---cccCCEEEEE
Q 042426 159 GGKMLDAVLLN---MRICGHIAVC 179 (270)
Q Consensus 159 g~~~~~~~~~~---l~~~G~~v~~ 179 (270)
-...+...++. ..++..++.+
T Consensus 70 ~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 70 KPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhhccCCCEEEEe
Confidence 87655555544 4455666654
No 354
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.99 E-value=0.0052 Score=49.24 Aligned_cols=78 Identities=14% Similarity=0.222 Sum_probs=52.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGIDIY 154 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v 154 (270)
+++|+|++|++|..+++.+...|++|+.+.+++++.+.+.+++ +.. ...|..+.++..+.+.+... +.+|++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 81 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM 81 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999889999999998876654443232 321 12344444233333333221 258999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
+.+.|.
T Consensus 82 i~~ag~ 87 (254)
T TIGR02415 82 VNNAGV 87 (254)
T ss_pred EECCCc
Confidence 999873
No 355
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.97 E-value=0.0071 Score=48.13 Aligned_cols=80 Identities=24% Similarity=0.317 Sum_probs=50.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHh---CCC-ce--eecCCchhHHHHHHhHcC--CCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-VDLLKHKF---GFD-DA--FNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-~~~~~~~~---g~~-~v--i~~~~~~~~~~~i~~~~~--~~~ 151 (270)
+.+++|+|++|++|..++..+...|++|+++.++..+ .+...+.+ +.. .. .|..+.+++.+.+.+... +++
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGV 84 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999998889999887765542 22222122 222 12 255554233333333322 258
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|.++.++|.
T Consensus 85 d~vi~~ag~ 93 (248)
T PRK05557 85 DILVNNAGI 93 (248)
T ss_pred CEEEECCCc
Confidence 999998873
No 356
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.97 E-value=0.0063 Score=48.88 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=61.5
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-hCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK-FGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENV 158 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~-~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~ 158 (270)
+.+|+|+||+|.+|..+++.+...|.+|+++.|++++....... .+.. ...|..+. . +.+.+....++|+||.+.
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~--~-~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG--S-DKLVEAIGDDSDAVICAT 93 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC--H-HHHHHHhhcCCCEEEECC
Confidence 46899999999999999998888899999999887765433211 1121 11243331 1 222222212589999887
Q ss_pred Ccc--------------hHHHHHHccccC--CEEEEEcccc
Q 042426 159 GGK--------------MLDAVLLNMRIC--GHIAVCGMIS 183 (270)
Q Consensus 159 g~~--------------~~~~~~~~l~~~--G~~v~~g~~~ 183 (270)
|.. .....++.+... ++++.++...
T Consensus 94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 631 123344444433 6888877643
No 357
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.95 E-value=0.0083 Score=45.33 Aligned_cols=79 Identities=14% Similarity=0.182 Sum_probs=54.3
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--Cce---eecCCchhHHHHHHhHc--CCCccEE
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--DDA---FNYKEEPDLDAALNRCF--PEGIDIY 154 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~~v---i~~~~~~~~~~~i~~~~--~~~~d~v 154 (270)
...+|.|+++++|.+..|++...|++|.+.+.+.+..+.....+|- +|. .|.++..+....+.+.. .|.++++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvl 94 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVL 94 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEE
Confidence 5689999999999999999999999999999777665555436654 221 23344323322233222 1268999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
++|.|-
T Consensus 95 VncAGI 100 (256)
T KOG1200|consen 95 VNCAGI 100 (256)
T ss_pred EEcCcc
Confidence 999993
No 358
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.95 E-value=0.0069 Score=48.86 Aligned_cols=81 Identities=19% Similarity=0.189 Sum_probs=51.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEG 150 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~ 150 (270)
++.+++|+||++++|..+++.+...|++|+++.++. +..+.+.++ .+.. ...|..+..+..+.+.+.. .++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999999999999998887743 333322212 2322 1234554423333333221 136
Q ss_pred ccEEEeCCCc
Q 042426 151 IDIYFENVGG 160 (270)
Q Consensus 151 ~d~v~d~~g~ 160 (270)
+|+++.+.|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 8999999883
No 359
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.95 E-value=0.012 Score=43.33 Aligned_cols=94 Identities=23% Similarity=0.238 Sum_probs=61.6
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEe
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFE 156 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d 156 (270)
.++.+++|+|+ |++|...++.+...| .+|++..++.++.+.+.++++... ..+.. +..+.+ +++|+|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEELL-----AEADLIIN 87 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhcc-----ccCCEEEe
Confidence 44678999997 999999999888886 689999998888776654666421 11111 222222 24999999
Q ss_pred CCCcchH-----HHHHHccccCCEEEEEcc
Q 042426 157 NVGGKML-----DAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 157 ~~g~~~~-----~~~~~~l~~~G~~v~~g~ 181 (270)
|++.... ......++++..++.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 9986432 112234566666666644
No 360
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.01 Score=47.62 Aligned_cols=80 Identities=20% Similarity=0.242 Sum_probs=52.0
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhH---c---
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRC---F--- 147 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~---~--- 147 (270)
+.+++|+|++|++|..+++.+...|++|++. .++.++.+...+++ +.. ...|..+..++.+.+.+. .
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~ 85 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR 85 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence 4689999999999999999888889988775 56666554443233 221 123555543444433332 1
Q ss_pred -C-CCccEEEeCCCc
Q 042426 148 -P-EGIDIYFENVGG 160 (270)
Q Consensus 148 -~-~~~d~v~d~~g~ 160 (270)
+ +++|+++.+.|.
T Consensus 86 ~~~~~id~vi~~ag~ 100 (254)
T PRK12746 86 VGTSEIDILVNNAGI 100 (254)
T ss_pred cCCCCccEEEECCCC
Confidence 1 258999999874
No 361
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.93 E-value=0.013 Score=44.76 Aligned_cols=98 Identities=18% Similarity=0.149 Sum_probs=60.5
Q ss_pred hcCCCCCcEEEEecCCchHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCC-C
Q 042426 75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV-G-CYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPE-G 150 (270)
Q Consensus 75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g-~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~-~ 150 (270)
...+++|++||.+|+ | .|..+..+++.. + .+|++++.++.. . ..++..+ .|..+. ...+.+.+..++ +
T Consensus 27 ~~~i~~g~~VLDiG~-G-tG~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~ 98 (188)
T TIGR00438 27 FKLIKPGDTVLDLGA-A-PGGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDK 98 (188)
T ss_pred hcccCCCCEEEEecC-C-CCHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCC
Confidence 356789999999995 3 344455555543 3 489999988643 1 2233311 244333 344445554444 7
Q ss_pred ccEEEeC-----CC-------------cchHHHHHHccccCCEEEEEc
Q 042426 151 IDIYFEN-----VG-------------GKMLDAVLLNMRICGHIAVCG 180 (270)
Q Consensus 151 ~d~v~d~-----~g-------------~~~~~~~~~~l~~~G~~v~~g 180 (270)
+|+|+.. .| ...+..+.++|+++|+++...
T Consensus 99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9999952 12 125677888999999998753
No 362
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.91 E-value=0.0058 Score=49.99 Aligned_cols=75 Identities=12% Similarity=-0.034 Sum_probs=52.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
++.+++|+|+ |+.+.+++.-+..+|+ +|+++.|+.++.+.+.++++.. .+..... . +.+.+.. ..+|+|++|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~---~-~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG---D-SGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc---h-hhhhhcc-cCCCEEEEC
Confidence 4678999997 9999999999999998 8999999998888776565432 1111110 0 1111111 248999999
Q ss_pred CCc
Q 042426 158 VGG 160 (270)
Q Consensus 158 ~g~ 160 (270)
+..
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 874
No 363
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.89 E-value=0.012 Score=44.13 Aligned_cols=93 Identities=18% Similarity=0.232 Sum_probs=62.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--DDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 160 (270)
+|.|+||+|-+|...++=|...|-+|++++|++.+....+ ...+ ..++| .......+ .|+|+|+++.|.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd------~~~~a~~l--~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFD------LTSLASDL--AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccC------hhhhHhhh--cCCceEEEeccC
Confidence 5889999999999999999999999999999998876543 2211 01222 11111112 259999999875
Q ss_pred c----------hHHHHHHccccC--CEEEEEccccc
Q 042426 161 K----------MLDAVLLNMRIC--GHIAVCGMISQ 184 (270)
Q Consensus 161 ~----------~~~~~~~~l~~~--G~~v~~g~~~~ 184 (270)
. ..+..+..|+.- -|+..+|..+.
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 3 223455566653 37777776443
No 364
>PLN02366 spermidine synthase
Probab=96.88 E-value=0.014 Score=48.31 Aligned_cols=98 Identities=15% Similarity=0.109 Sum_probs=62.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC------CceeecCCchhHHHHHHhHcCCCc
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF------DDAFNYKEEPDLDAALNRCFPEGI 151 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~~~~ 151 (270)
.+..+||++|+ |-|..+..++++-+. +|.++..+++-.+.+++.+.. +.-+..... |..+.+++..++.|
T Consensus 90 ~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~y 166 (308)
T PLN02366 90 PNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGTY 166 (308)
T ss_pred CCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCCC
Confidence 45689999995 446677788887665 888999888877877743432 101111112 33344443323479
Q ss_pred cEEEeCCCc-----------chHHHHHHccccCCEEEEE
Q 042426 152 DIYFENVGG-----------KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 152 d~v~d~~g~-----------~~~~~~~~~l~~~G~~v~~ 179 (270)
|+|+--... +.++.+.+.|+++|.++.-
T Consensus 167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q 205 (308)
T PLN02366 167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ 205 (308)
T ss_pred CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence 998754322 2477889999999999753
No 365
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.87 E-value=0.035 Score=45.15 Aligned_cols=95 Identities=14% Similarity=0.141 Sum_probs=60.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV 158 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~ 158 (270)
..+.+++|+|+ |++|.+++..+...|++|++..++.++.+.+.++++........ ...+ .....+|+|++|+
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~---~~~~----~~~~~~DivInat 186 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF---SMDE----LPLHRVDLIINAT 186 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe---chhh----hcccCccEEEECC
Confidence 45678999998 89999999888888999999999988776665454321101010 1111 1112589999999
Q ss_pred Ccch---H---HHHHHccccCCEEEEEcc
Q 042426 159 GGKM---L---DAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 159 g~~~---~---~~~~~~l~~~G~~v~~g~ 181 (270)
+... . ......++++..++.+..
T Consensus 187 p~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 187 SAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred CCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 8531 1 112345677777776644
No 366
>PRK00811 spermidine synthase; Provisional
Probab=96.87 E-value=0.012 Score=48.18 Aligned_cols=97 Identities=9% Similarity=0.064 Sum_probs=63.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-------CceeecCCchhHHHHHHhHcCCC
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF-------DDAFNYKEEPDLDAALNRCFPEG 150 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~-------~~vi~~~~~~~~~~~i~~~~~~~ 150 (270)
.+..+||++| +|.|..+..+++..+. +|.++..+++-.+.+++.+.. +.-+..... |..+.+.. ..+.
T Consensus 75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence 3457899999 5667778888887665 899999999888888744421 111111112 33444433 3447
Q ss_pred ccEEEeCCCc-----------chHHHHHHccccCCEEEEE
Q 042426 151 IDIYFENVGG-----------KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 151 ~d~v~d~~g~-----------~~~~~~~~~l~~~G~~v~~ 179 (270)
||+|+-.... +.++.+.+.|+++|.++.-
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9998764321 2457888999999998864
No 367
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.86 E-value=0.018 Score=45.44 Aligned_cols=101 Identities=18% Similarity=0.253 Sum_probs=72.6
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcC
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFP 148 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~ 148 (270)
...++.+|++|+=.| .|.|-+++.||++.|- +|+.....++..+.+++ ++|....+..... |..+.+...
T Consensus 88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-Dv~~~~~~~-- 162 (256)
T COG2519 88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-DVREGIDEE-- 162 (256)
T ss_pred HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-ccccccccc--
Confidence 457899999998877 6778899999998875 99999988887777763 3455433333332 333322221
Q ss_pred CCccEEEeCCCcc--hHHHHHHccccCCEEEEEc
Q 042426 149 EGIDIYFENVGGK--MLDAVLLNMRICGHIAVCG 180 (270)
Q Consensus 149 ~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g 180 (270)
.+|.+|=-...+ .++.+.+.|+++|+++.+.
T Consensus 163 -~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 163 -DVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred -ccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 588887656554 8899999999999998873
No 368
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.86 E-value=0.0024 Score=51.69 Aligned_cols=76 Identities=14% Similarity=0.164 Sum_probs=51.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEeC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFEN 157 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d~ 157 (270)
+.+++|+|++|++|.++++.+...|++|+.+++++++.+. .... ...|..+..++.+.+.+.. .+.+|+++.+
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ 84 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNN 84 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5789999999999999999999999999999877644321 1111 2235554423443333322 1368999998
Q ss_pred CCc
Q 042426 158 VGG 160 (270)
Q Consensus 158 ~g~ 160 (270)
.|.
T Consensus 85 Ag~ 87 (266)
T PRK06171 85 AGI 87 (266)
T ss_pred Ccc
Confidence 873
No 369
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.85 E-value=0.009 Score=46.14 Aligned_cols=97 Identities=12% Similarity=0.043 Sum_probs=62.1
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCccE
Q 042426 77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGIDI 153 (270)
Q Consensus 77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~ 153 (270)
...++.+||-.| +|.|..++.+++. |.+|++++.+++-.+.+++.. +... +..... ++.+. ..++.||+
T Consensus 27 ~~~~~~~vLDiG--cG~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~~~---~~~~~fD~ 98 (197)
T PRK11207 27 KVVKPGKTLDLG--CGNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLNNL---TFDGEYDF 98 (197)
T ss_pred ccCCCCcEEEEC--CCCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-ChhhC---CcCCCcCE
Confidence 345667899998 6678888888875 889999999988777666322 2221 111111 22211 11236999
Q ss_pred EEeCCCc---------chHHHHHHccccCCEEEEEcc
Q 042426 154 YFENVGG---------KMLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 154 v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~ 181 (270)
|+.+..- ..+....+.|+|+|.++.+..
T Consensus 99 I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~ 135 (197)
T PRK11207 99 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 135 (197)
T ss_pred EEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 9875431 256778889999999665443
No 370
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.85 E-value=0.0059 Score=48.71 Aligned_cols=80 Identities=24% Similarity=0.311 Sum_probs=49.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHH-HHHHH--HhCCCc---eeecCCchhHHHHHHhHc--CCCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKV-DLLKH--KFGFDD---AFNYKEEPDLDAALNRCF--PEGI 151 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~-~~~~~--~~g~~~---vi~~~~~~~~~~~i~~~~--~~~~ 151 (270)
+.+++|+|++|++|..+++.+...|++|++..+ +..+. +.+.+ ..+... ..|..+..+..+.+.+.. .+++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 568999999999999999999999999888653 23322 22220 234321 134444323333333221 1368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++++.|.
T Consensus 83 d~li~~ag~ 91 (246)
T PRK12938 83 DVLVNNAGI 91 (246)
T ss_pred CEEEECCCC
Confidence 999999974
No 371
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.85 E-value=0.023 Score=44.92 Aligned_cols=111 Identities=23% Similarity=0.288 Sum_probs=75.8
Q ss_pred hhHHH-HhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC---CceeecCCchhHH
Q 042426 66 LTAYG-GLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF---DDAFNYKEEPDLD 140 (270)
Q Consensus 66 ~ta~~-~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~ 140 (270)
.-.|. .+....+..+|++||=.+ +|+|-+++.+++..|- +|++++.++.-++.++++..- .. +.+-.. +..
T Consensus 36 ~~~Wr~~~i~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~-dAe 111 (238)
T COG2226 36 HRLWRRALISLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG-DAE 111 (238)
T ss_pred hHHHHHHHHHhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe-chh
Confidence 34444 233444566899999987 8899999999998875 999999999988888755432 11 221111 111
Q ss_pred HHHHhHcCC-CccEEEeCCCc-------chHHHHHHccccCCEEEEEcccc
Q 042426 141 AALNRCFPE-GIDIYFENVGG-------KMLDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 141 ~~i~~~~~~-~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~~ 183 (270)
.+. .++ .||++.-+.|- ..+.++.+.|+|+|+++.+....
T Consensus 112 -~LP--f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 112 -NLP--FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred -hCC--CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 111 222 68998877772 37899999999999999886643
No 372
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.84 E-value=0.014 Score=47.29 Aligned_cols=102 Identities=13% Similarity=0.192 Sum_probs=67.6
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcC-CCcc
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFP-EGID 152 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~-~~~d 152 (270)
...++.++.+||=.| +|.|..+..+++..+++|++++.+++-.+.+++.......+..... ++.+ ...+ +.||
T Consensus 46 ~~l~l~~~~~VLDiG--cG~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~---~~~~~~~FD 119 (263)
T PTZ00098 46 SDIELNENSKVLDIG--SGLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILK---KDFPENTFD 119 (263)
T ss_pred HhCCCCCCCEEEEEc--CCCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Cccc---CCCCCCCeE
Confidence 556788999999998 4556667777777788999999999888888744432211222111 2211 1112 3699
Q ss_pred EEEeCC-----C--c--chHHHHHHccccCCEEEEEcc
Q 042426 153 IYFENV-----G--G--KMLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 153 ~v~d~~-----g--~--~~~~~~~~~l~~~G~~v~~g~ 181 (270)
+|+..- . . ..+..+.+.|+|+|+++....
T Consensus 120 ~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 120 MIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 998621 1 1 267888899999999987654
No 373
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.84 E-value=0.0085 Score=48.72 Aligned_cols=71 Identities=20% Similarity=0.251 Sum_probs=52.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCc----eeecCCchhHHHHHHhHcCCCccEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDD----AFNYKEEPDLDAALNRCFPEGIDIY 154 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~----vi~~~~~~~~~~~i~~~~~~~~d~v 154 (270)
+|.+++|.|| ||.+.+++.-+...|+ +++++.|+.++.+.+.+.++... .....+. +... .+|++
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~----~~~~-----~~dli 194 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADL----EGLE-----EADLL 194 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccc----cccc-----ccCEE
Confidence 5789999998 9999999999999997 89999999999888875666421 1111111 0000 38999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
+||+.-
T Consensus 195 INaTp~ 200 (283)
T COG0169 195 INATPV 200 (283)
T ss_pred EECCCC
Confidence 999873
No 374
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.84 E-value=0.011 Score=48.56 Aligned_cols=45 Identities=20% Similarity=0.202 Sum_probs=35.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHh
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK---EKVDLLKHKF 125 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~---~~~~~~~~~~ 125 (270)
.+.+++|+|+ ||+|.+++..+...|+ +|+++.|+. ++.+.+.+++
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l 173 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI 173 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence 4678999998 8999999988888999 599999885 4554444344
No 375
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.83 E-value=0.018 Score=45.09 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=62.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE 156 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d 156 (270)
+|-+||=.|. |.|+.+.-+| .+|++|++++.+++..+.++. +-|. .+||... . .+.+.+.. +.||+|+.
T Consensus 59 ~g~~vLDvGC--GgG~Lse~mA-r~Ga~VtgiD~se~~I~~Ak~ha~e~gv--~i~y~~~-~-~edl~~~~-~~FDvV~c 130 (243)
T COG2227 59 PGLRVLDVGC--GGGILSEPLA-RLGASVTGIDASEKPIEVAKLHALESGV--NIDYRQA-T-VEDLASAG-GQFDVVTC 130 (243)
T ss_pred CCCeEEEecC--CccHhhHHHH-HCCCeeEEecCChHHHHHHHHhhhhccc--cccchhh-h-HHHHHhcC-CCccEEEE
Confidence 6778998885 4455555554 458999999999999988872 2222 2567653 2 23332221 47999865
Q ss_pred -----CCCc--chHHHHHHccccCCEEEEEc
Q 042426 157 -----NVGG--KMLDAVLLNMRICGHIAVCG 180 (270)
Q Consensus 157 -----~~g~--~~~~~~~~~l~~~G~~v~~g 180 (270)
-+.. ..+..+.++++|+|.++...
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 3433 26788999999999988753
No 376
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.83 E-value=0.021 Score=46.54 Aligned_cols=149 Identities=18% Similarity=0.183 Sum_probs=86.6
Q ss_pred CCCCCEEEecccceeeEeecCCccceeccCCCCCccccccccCchhhhHHH--HhhhhcCCCCCcEEEEecCCchHHHHH
Q 042426 20 YKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYG--GLHELCSPKKGEYVYVSAASGAVGQLV 97 (270)
Q Consensus 20 ~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~--~l~~~~~~~~g~~vlI~ga~g~vG~~a 97 (270)
+++|++.+-.-+|.+|-.-.... ++++ ..+ +.|....=| .|++. ++. ..+++|.+++=.| +|.|-++
T Consensus 109 ~rig~~f~I~Psw~~~~~~~~~~-~i~l-DPG--lAFGTG~Hp---TT~lcL~~Le--~~~~~g~~vlDvG--cGSGILa 177 (300)
T COG2264 109 VRIGERFVIVPSWREYPEPSDEL-NIEL-DPG--LAFGTGTHP---TTSLCLEALE--KLLKKGKTVLDVG--CGSGILA 177 (300)
T ss_pred EEeeeeEEECCCCccCCCCCCce-EEEE-ccc--cccCCCCCh---hHHHHHHHHH--HhhcCCCEEEEec--CChhHHH
Confidence 56688777777777764443233 6666 444 444222222 23222 332 2356899999998 6667766
Q ss_pred HHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCcee--ecCCchhHHHHHHhHcCCCccEEEeCCCc----chHHHHHHcc
Q 042426 98 GQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAF--NYKEEPDLDAALNRCFPEGIDIYFENVGG----KMLDAVLLNM 170 (270)
Q Consensus 98 i~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi--~~~~~~~~~~~i~~~~~~~~d~v~d~~g~----~~~~~~~~~l 170 (270)
|-.++ +|+ +|++++.++-..+.+++-.....+- .........+. ...+.||+|+-..=. .........+
T Consensus 178 IAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~---~~~~~~DvIVANILA~vl~~La~~~~~~l 253 (300)
T COG2264 178 IAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEV---PENGPFDVIVANILAEVLVELAPDIKRLL 253 (300)
T ss_pred HHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhh---cccCcccEEEehhhHHHHHHHHHHHHHHc
Confidence 65544 477 7999998887766665322111111 01110011111 112369999877633 2566788899
Q ss_pred ccCCEEEEEcccc
Q 042426 171 RICGHIAVCGMIS 183 (270)
Q Consensus 171 ~~~G~~v~~g~~~ 183 (270)
+|+|+++..|...
T Consensus 254 kpgg~lIlSGIl~ 266 (300)
T COG2264 254 KPGGRLILSGILE 266 (300)
T ss_pred CCCceEEEEeehH
Confidence 9999999998744
No 377
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.82 E-value=0.01 Score=47.30 Aligned_cols=80 Identities=21% Similarity=0.291 Sum_probs=50.6
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC-c--eeecCCchhHHHHHHhHcC--CCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKF---GFD-D--AFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
+.+++|+|++|++|..+++.+...|++|+++.+ ++++.+.+.+++ +.. . ..|..+...+.+.+.+... +.+
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKV 85 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999988888999887654 444443332122 322 1 1344443233333333222 258
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|.++.++|.
T Consensus 86 d~vi~~ag~ 94 (247)
T PRK12935 86 DILVNNAGI 94 (247)
T ss_pred CEEEECCCC
Confidence 999999874
No 378
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.80 E-value=0.012 Score=50.68 Aligned_cols=105 Identities=21% Similarity=0.206 Sum_probs=64.4
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHHh-CCC-ceeecCCchhHHHHHHhHcCC
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD------LLKHKF-GFD-DAFNYKEEPDLDAALNRCFPE 149 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~------~~~~~~-g~~-~vi~~~~~~~~~~~i~~~~~~ 149 (270)
-..+.+|+|+||+|.+|..+++.+...|.+|++++++..+.+ ...+.. +.. ...|..+.+++.+.+.+. .+
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~ 135 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-GD 135 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-CC
Confidence 345679999999999999999998888999999998765432 111011 222 123555542344444332 11
Q ss_pred CccEEEeCCCcc------h-------HHHHHHccccC--CEEEEEcccc
Q 042426 150 GIDIYFENVGGK------M-------LDAVLLNMRIC--GHIAVCGMIS 183 (270)
Q Consensus 150 ~~d~v~d~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~~ 183 (270)
++|+||+|++.. . ....++.+... +++|.++...
T Consensus 136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~ 184 (390)
T PLN02657 136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC 184 (390)
T ss_pred CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 599999998631 1 12334444333 4788877543
No 379
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.79 E-value=0.01 Score=47.58 Aligned_cols=79 Identities=15% Similarity=0.216 Sum_probs=50.4
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCcc
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGID 152 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d 152 (270)
.+++|+|++|++|..+++.+...|++|++++++. ++.+...+.+ +.. ...|..+..++.+.+.+... +.+|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999988999999998653 2322222122 221 12355554233333333321 3589
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99999873
No 380
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.012 Score=46.49 Aligned_cols=74 Identities=18% Similarity=0.259 Sum_probs=51.4
Q ss_pred EEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CCC-c--eeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 85 YVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF--GFD-D--AFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 85 lI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~--vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
+|+|+++++|..+++.+...|++|++++++.++.+.+.+.+ +.. + ..|..+.+++.+.+.+. +++|+++.+.|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 58999999999999988889999999999877766554333 221 1 23555543444444332 35899999987
Q ss_pred c
Q 042426 160 G 160 (270)
Q Consensus 160 ~ 160 (270)
.
T Consensus 79 ~ 79 (230)
T PRK07041 79 D 79 (230)
T ss_pred C
Confidence 3
No 381
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.79 E-value=0.018 Score=47.14 Aligned_cols=71 Identities=21% Similarity=0.139 Sum_probs=50.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC----ceeecCCchhHHHHHHhHcCCCccEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD----DAFNYKEEPDLDAALNRCFPEGIDIY 154 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~~~~~d~v 154 (270)
.+.+++|.|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++.. .+.... +..+.+ ..+|+|
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDiV 196 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADGL 196 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCEE
Confidence 4578999997 9999999999999998 8999999988887776455321 121111 222222 248999
Q ss_pred EeCCC
Q 042426 155 FENVG 159 (270)
Q Consensus 155 ~d~~g 159 (270)
++|+.
T Consensus 197 InaTp 201 (284)
T PRK12549 197 VHATP 201 (284)
T ss_pred EECCc
Confidence 99964
No 382
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.79 E-value=0.011 Score=46.40 Aligned_cols=100 Identities=21% Similarity=0.241 Sum_probs=65.4
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcC
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFP 148 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~ 148 (270)
+...++++++||-.| +|.|..++.+++..+. +|+.+..+++-.+.+++ +.|.+++- .... +..+... ..
T Consensus 71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~-~~~~-d~~~~~~--~~ 144 (215)
T TIGR00080 71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVI-VIVG-DGTQGWE--PL 144 (215)
T ss_pred HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeE-EEEC-CcccCCc--cc
Confidence 455688999999998 7778888888887654 79999999887776653 33443221 1111 2211111 11
Q ss_pred CCccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426 149 EGIDIYFENVGG-KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 149 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 179 (270)
+.||+|+-.... .......+.|+++|+++..
T Consensus 145 ~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 145 APYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred CCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 269988754433 4556788899999998864
No 383
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.77 E-value=0.047 Score=38.75 Aligned_cols=95 Identities=20% Similarity=0.232 Sum_probs=55.1
Q ss_pred EEEecCCchHHHHHHHHHHHcC--CEEEEEeCC--HHHHHHHHHHhCCCceeecCCc--hhHHHH---------------
Q 042426 84 VYVSAASGAVGQLVGQFVKLVG--CYVVGSARS--KEKVDLLKHKFGFDDAFNYKEE--PDLDAA--------------- 142 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~--~~~~~~~~~~~g~~~vi~~~~~--~~~~~~--------------- 142 (270)
|.|.|+||++|..++.+.+.+. ++|+..+.. -+.+....++|....+.-.++. ..+.+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 6799999999999999999887 688777743 2333332237777655544332 011111
Q ss_pred -HHhHcC-CCccEEEeCCCc-chHHHHHHccccCCEEEE
Q 042426 143 -LNRCFP-EGIDIYFENVGG-KMLDAVLLNMRICGHIAV 178 (270)
Q Consensus 143 -i~~~~~-~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~ 178 (270)
+.+... ..+|+++.++.+ .-+.-.+..++.+-++..
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 122222 257888887754 566667777776655544
No 384
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.76 E-value=0.025 Score=46.23 Aligned_cols=45 Identities=20% Similarity=0.167 Sum_probs=38.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKF 125 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~ 125 (270)
.+.+++|+|+ ||.+.+++.-+...|+ +++++.|+.++.+.+.+++
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 4678999998 9999999988888998 8999999998887776554
No 385
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.75 E-value=0.013 Score=46.35 Aligned_cols=70 Identities=26% Similarity=0.378 Sum_probs=50.4
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE--KVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~--~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
|+|.||+|.+|..+++.+...+.+|.+.+|+.. ..+.++ ..|+..+ .|+.+.+++.+.++ |+|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~~~l~~al~-----g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDPESLVAALK-----GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-HHHHHHHHT-----TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCHHHHHHHHc-----CCceEEeecC
Confidence 789999999999999999888899999998764 355566 6787532 34443323333332 5999999888
No 386
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.74 E-value=0.05 Score=45.35 Aligned_cols=88 Identities=22% Similarity=0.189 Sum_probs=63.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.|.++.|+|. |.+|++.+++++..|.+|+...+++. +...++.++.++ ++.+.+.+ .|++.-...
T Consensus 145 ~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~-------~l~ell~~-----sDii~l~~P 209 (324)
T COG1052 145 RGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV-------DLDELLAE-----SDIISLHCP 209 (324)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec-------cHHHHHHh-----CCEEEEeCC
Confidence 3789999996 99999999999999999999998765 333224444322 34444444 788766554
Q ss_pred -cc-----hHHHHHHccccCCEEEEEccc
Q 042426 160 -GK-----MLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 160 -~~-----~~~~~~~~l~~~G~~v~~g~~ 182 (270)
++ .-...++.|++++.+|.++..
T Consensus 210 lt~~T~hLin~~~l~~mk~ga~lVNtaRG 238 (324)
T COG1052 210 LTPETRHLINAEELAKMKPGAILVNTARG 238 (324)
T ss_pred CChHHhhhcCHHHHHhCCCCeEEEECCCc
Confidence 32 235788899999999998773
No 387
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.74 E-value=0.062 Score=45.97 Aligned_cols=94 Identities=23% Similarity=0.305 Sum_probs=65.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV 158 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~ 158 (270)
.+.++||+|+ |-+|..++..+...|+ +|++..|+.++.+.+.+++|.. ++..+ +....+.+ +|+||.++
T Consensus 177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---el~~~l~~-----~DvVissT 246 (414)
T COG0373 177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---ELLEALAE-----ADVVISST 246 (414)
T ss_pred ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---HHHHhhhh-----CCEEEEec
Confidence 5678999998 9999999999999996 8999999999888777799953 33222 23333333 99999999
Q ss_pred Ccc----hHHHHHHccccC-C-EEEEEcccc
Q 042426 159 GGK----MLDAVLLNMRIC-G-HIAVCGMIS 183 (270)
Q Consensus 159 g~~----~~~~~~~~l~~~-G-~~v~~g~~~ 183 (270)
+.+ .-......++.. . .++.++.+.
T Consensus 247 sa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 247 SAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred CCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 875 223333344433 2 455666643
No 388
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.73 E-value=0.0048 Score=47.78 Aligned_cols=89 Identities=10% Similarity=0.019 Sum_probs=55.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeecCCchhHHH-HHHhHcCCCccEEEeC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFDDAFNYKEEPDLDA-ALNRCFPEGIDIYFEN 157 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~-~i~~~~~~~~d~v~d~ 157 (270)
.|.+|+|.|+ |.+|...++.+...|++|+++.+... ....+. .-+. ..+..+. +.+ .+ .++|+|+-+
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~-i~~~~~~---~~~~~l-----~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGK-IRWKQKE---FEPSDI-----VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCC-EEEEecC---CChhhc-----CCceEEEEc
Confidence 3578999998 99999999888888999998875421 222222 1121 1111111 111 11 258999999
Q ss_pred CCcchHHHHHHccccCCEEEEE
Q 042426 158 VGGKMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 158 ~g~~~~~~~~~~l~~~G~~v~~ 179 (270)
++.+.++..+...+..+.++..
T Consensus 78 T~d~elN~~i~~~a~~~~lvn~ 99 (202)
T PRK06718 78 TNDPRVNEQVKEDLPENALFNV 99 (202)
T ss_pred CCCHHHHHHHHHHHHhCCcEEE
Confidence 9988777666655555666654
No 389
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.73 E-value=0.011 Score=50.71 Aligned_cols=91 Identities=19% Similarity=0.207 Sum_probs=56.7
Q ss_pred EEEecCCchHHHHHHHHHHHcC-C-EEEEEeCCHHHHHHHHHHhC-CC---ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 84 VYVSAASGAVGQLVGQFVKLVG-C-YVVGSARSKEKVDLLKHKFG-FD---DAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g-~-~v~~~~~~~~~~~~~~~~~g-~~---~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
|+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+++. .. ..+|..+..+ +.+... +.|+|++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPES----LAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHH----HHHHHT-TSSEEEE-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHH----HHHHHh-cCCEEEEC
Confidence 789999 999999999887665 4 89999999999888764422 21 2345544312 333322 37999999
Q ss_pred CCcchHH-HHHHccccCCEEEEEc
Q 042426 158 VGGKMLD-AVLLNMRICGHIAVCG 180 (270)
Q Consensus 158 ~g~~~~~-~~~~~l~~~G~~v~~g 180 (270)
+|..... -+-.|++.+-.++..+
T Consensus 75 ~gp~~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp SSGGGHHHHHHHHHHHT-EEEESS
T ss_pred CccchhHHHHHHHHHhCCCeeccc
Confidence 9975333 4444566677888743
No 390
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=96.73 E-value=0.017 Score=48.40 Aligned_cols=75 Identities=15% Similarity=0.131 Sum_probs=48.8
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCCCc----eeecCCchhHHHHHHhHcCCCccEE
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKFGFDD----AFNYKEEPDLDAALNRCFPEGIDIY 154 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~g~~~----vi~~~~~~~~~~~i~~~~~~~~d~v 154 (270)
|.+|||+||+|.+|..+++.+...| .+|++.+++..+.+.+.+.+.... ..|..+...+.+.+. ++|+|
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-----~iD~V 78 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-----GVDYV 78 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-----cCCEE
Confidence 5789999999999999988877665 689988877665444432332211 124444322333222 38999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
|.++|.
T Consensus 79 ih~Ag~ 84 (324)
T TIGR03589 79 VHAAAL 84 (324)
T ss_pred EECccc
Confidence 998873
No 391
>PRK04148 hypothetical protein; Provisional
Probab=96.72 E-value=0.023 Score=40.58 Aligned_cols=47 Identities=21% Similarity=0.195 Sum_probs=37.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD 128 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~ 128 (270)
.++.++++.|. | .|...+..+...|.+|++++.+++..+.++ +.+.+
T Consensus 15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~ 61 (134)
T PRK04148 15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLN 61 (134)
T ss_pred ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCe
Confidence 34678999996 6 887566666678999999999999988887 66654
No 392
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.71 E-value=0.043 Score=46.05 Aligned_cols=88 Identities=20% Similarity=0.207 Sum_probs=63.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.|.+|.|+|. |.+|..+++.++.+|.+|++..++.... ... ..+.. + . ++.+.+.+ .|+|+-++.
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~----~--~-~l~ell~~-----aDiV~l~lP 213 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAE----Y--R-PLEELLRE-----SDFVSLHVP 213 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCE----e--c-CHHHHHhh-----CCEEEEeCC
Confidence 4679999997 9999999999999999999998765432 222 44432 1 1 34444444 799998886
Q ss_pred c-c-----hHHHHHHccccCCEEEEEccc
Q 042426 160 G-K-----MLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 160 ~-~-----~~~~~~~~l~~~G~~v~~g~~ 182 (270)
. + .-...+..|+++..++.++..
T Consensus 214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aRg 242 (333)
T PRK13243 214 LTKETYHMINEERLKLMKPTAILVNTARG 242 (333)
T ss_pred CChHHhhccCHHHHhcCCCCeEEEECcCc
Confidence 3 2 224678889999999998763
No 393
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.71 E-value=0.024 Score=46.07 Aligned_cols=68 Identities=16% Similarity=0.172 Sum_probs=50.0
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE 156 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d 156 (270)
...+.+++|.|+ ||.+.+++.-+...|+ +|+++.|+.++.+.+.++++.. +...+. ...+|+|++
T Consensus 119 ~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~~---~~~~dlvIN 184 (272)
T PRK12550 119 VPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDLG---GIEADILVN 184 (272)
T ss_pred CCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhcc---cccCCEEEE
Confidence 444568999997 9999999999999998 7999999998888776455421 111111 124899999
Q ss_pred CCC
Q 042426 157 NVG 159 (270)
Q Consensus 157 ~~g 159 (270)
|+.
T Consensus 185 aTp 187 (272)
T PRK12550 185 VTP 187 (272)
T ss_pred CCc
Confidence 986
No 394
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.70 E-value=0.013 Score=46.49 Aligned_cols=79 Identities=25% Similarity=0.336 Sum_probs=49.6
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
..++||+||+|++|..+++.+...|.+|+++.++.. ..+.+.+. .+.. ...|..+..++.+.+.+... +++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 85 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence 358999999999999999999889999877665543 33322212 2221 12344444233333333211 368
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|.++.++|
T Consensus 86 d~vi~~ag 93 (249)
T PRK12825 86 DILVNNAG 93 (249)
T ss_pred CEEEECCc
Confidence 99999987
No 395
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.70 E-value=0.043 Score=38.47 Aligned_cols=101 Identities=23% Similarity=0.302 Sum_probs=65.7
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCC
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPE 149 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~ 149 (270)
....+.++++++-.|. |.|..+..+++..+ .+|++++.++...+.+++ .++...+ ..... +....... ..+
T Consensus 13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~~~-~~~~~~~~-~~~ 87 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNI-VIVEG-DAPEALED-SLP 87 (124)
T ss_pred HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCce-EEEec-cccccChh-hcC
Confidence 3345667889999984 55999999998765 599999999887777652 2343322 11111 11111111 113
Q ss_pred CccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426 150 GIDIYFENVGG----KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 150 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~ 179 (270)
.+|+|+-.... ..++.+.+.|+++|+++..
T Consensus 88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 88 EPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred CCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 69999876542 2678899999999998864
No 396
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.69 E-value=0.033 Score=45.35 Aligned_cols=95 Identities=18% Similarity=0.125 Sum_probs=65.8
Q ss_pred ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426 60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL 139 (270)
Q Consensus 60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~ 139 (270)
-+|+........+.+..---.|.+++|.|.+.-+|.-++.++...|++|++..+... ++
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l 195 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM 195 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence 356555555555533322236889999999666999999999999999988874321 23
Q ss_pred HHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEccc
Q 042426 140 DAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 140 ~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~ 182 (270)
.+.+++ +|+||.++|.+ .+.. +.++++..++.+|..
T Consensus 196 ~~~~~~-----ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~ 232 (286)
T PRK14175 196 ASYLKD-----ADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT 232 (286)
T ss_pred HHHHhh-----CCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence 333333 89999999986 3333 457888888888874
No 397
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.68 E-value=0.028 Score=43.94 Aligned_cols=98 Identities=13% Similarity=0.096 Sum_probs=63.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--------------eecCCchhHHHHHH
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA--------------FNYKEEPDLDAALN 144 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--------------i~~~~~~~~~~~i~ 144 (270)
.++.+||+.| +|.|.-++.+|. +|.+|++++.|+.-.+.+.++.+.... ++.... |+.+. .
T Consensus 33 ~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~~-~ 107 (213)
T TIGR03840 33 PAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCG-DFFAL-T 107 (213)
T ss_pred CCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEc-cCCCC-C
Confidence 5677999998 788888888885 699999999999988875434443210 110000 11100 0
Q ss_pred hHcCCCccEEEeCCCc---------chHHHHHHccccCCEEEEEcc
Q 042426 145 RCFPEGIDIYFENVGG---------KMLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 145 ~~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~ 181 (270)
....+.||.++|+..- ..+....++|+|+|+++..+.
T Consensus 108 ~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 108 AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 0001258999997641 257789999999998776654
No 398
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.67 E-value=0.013 Score=47.42 Aligned_cols=79 Identities=16% Similarity=0.226 Sum_probs=49.7
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhC----CC---ceeecCCchhH----HHHHHhHc--
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHKFG----FD---DAFNYKEEPDL----DAALNRCF-- 147 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~~g----~~---~vi~~~~~~~~----~~~i~~~~-- 147 (270)
.+++|+||++++|+.+++.+...|++|+++++. +++.+.+.+++. .. ...|..+.+.. .+.+.+..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 478999999999999999999999999998653 445444432332 11 12244443122 12222221
Q ss_pred CCCccEEEeCCCc
Q 042426 148 PEGIDIYFENVGG 160 (270)
Q Consensus 148 ~~~~d~v~d~~g~ 160 (270)
.+++|+++.++|.
T Consensus 82 ~g~iD~lv~nAG~ 94 (267)
T TIGR02685 82 FGRCDVLVNNASA 94 (267)
T ss_pred cCCceEEEECCcc
Confidence 2369999999873
No 399
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.66 E-value=0.013 Score=49.49 Aligned_cols=77 Identities=17% Similarity=0.239 Sum_probs=49.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----C-ceeecCCchhHHHHHHhHcCCCccEE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF----D-DAFNYKEEPDLDAALNRCFPEGIDIY 154 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~~~~d~v 154 (270)
++.+|||+||+|.+|..+++.+...|.+|+++.++........+.++. . ...|..+..++.+.+.+. ++|+|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---~~d~v 79 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF---KPEIV 79 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc---CCCEE
Confidence 467899999999999999999998999999998766543322112221 1 112333331232323221 58999
Q ss_pred EeCCC
Q 042426 155 FENVG 159 (270)
Q Consensus 155 ~d~~g 159 (270)
|.+++
T Consensus 80 ih~A~ 84 (349)
T TIGR02622 80 FHLAA 84 (349)
T ss_pred EECCc
Confidence 99987
No 400
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.66 E-value=0.013 Score=43.35 Aligned_cols=87 Identities=9% Similarity=0.099 Sum_probs=56.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.|.+|+|.|| |.+|..-++.+...|++|+++. ++..+.+. +++.- .++.+ .+.+. .-.++|+|+-+++
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i-~~~~~---~~~~~----dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYI-TWKQK---TFSND----DIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCc-EEEec---ccChh----cCCCceEEEECCC
Confidence 3678999998 9999998888888899999884 44444454 44321 12222 12111 1125899999999
Q ss_pred cchHHHHHHccccCCEEEE
Q 042426 160 GKMLDAVLLNMRICGHIAV 178 (270)
Q Consensus 160 ~~~~~~~~~~l~~~G~~v~ 178 (270)
.+..+..+...+..+.++.
T Consensus 80 d~e~N~~i~~~a~~~~~vn 98 (157)
T PRK06719 80 QHAVNMMVKQAAHDFQWVN 98 (157)
T ss_pred CHHHHHHHHHHHHHCCcEE
Confidence 8877766665555444444
No 401
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=96.66 E-value=0.014 Score=46.87 Aligned_cols=43 Identities=30% Similarity=0.342 Sum_probs=34.2
Q ss_pred EEEEecCCchHHHHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHh
Q 042426 83 YVYVSAASGAVGQLVGQFVKL----VGCYVVGSARSKEKVDLLKHKF 125 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~----~g~~v~~~~~~~~~~~~~~~~~ 125 (270)
.++|+|+++++|..++..+.. .|++|+.+.+++++.+.+.+++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l 48 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI 48 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence 589999999999987765543 6999999999988776665444
No 402
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.019 Score=46.20 Aligned_cols=80 Identities=15% Similarity=0.177 Sum_probs=49.6
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHc--C
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS----KEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCF--P 148 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~----~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~ 148 (270)
+.+++|+|++|++|..+++.+...|++|++++++ .++.+.+.+ ..+.. ...|..+..+..+.+.+.. .
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 87 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF 87 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence 5689999999999999999998899997776532 222222221 22322 1235554423333333322 1
Q ss_pred CCccEEEeCCCc
Q 042426 149 EGIDIYFENVGG 160 (270)
Q Consensus 149 ~~~d~v~d~~g~ 160 (270)
+++|+++.++|.
T Consensus 88 ~~id~li~~ag~ 99 (257)
T PRK12744 88 GRPDIAINTVGK 99 (257)
T ss_pred CCCCEEEECCcc
Confidence 368999999884
No 403
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.66 E-value=0.014 Score=46.54 Aligned_cols=78 Identities=19% Similarity=0.162 Sum_probs=49.0
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
.+++|+|+++++|..+++.+...|++|+++. +++++.+.+.++ .+.. ...|..+..++.+.+.+.. .+++|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999988899988765 444444333212 2322 1124343323443333322 13689
Q ss_pred EEEeCCC
Q 042426 153 IYFENVG 159 (270)
Q Consensus 153 ~v~d~~g 159 (270)
+++.++|
T Consensus 83 ~li~~ag 89 (248)
T PRK06947 83 ALVNNAG 89 (248)
T ss_pred EEEECCc
Confidence 9999887
No 404
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.65 E-value=0.011 Score=52.49 Aligned_cols=73 Identities=15% Similarity=0.134 Sum_probs=53.3
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
+.++++|+|+|. |..|++++++++..|++|++++..+...+.++ +.|.. ++... ...+.+. .+|+|+.+
T Consensus 9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~-~~~~~---~~~~~l~-----~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVA-TVSTS---DAVQQIA-----DYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCE-EEcCc---chHhHhh-----cCCEEEEC
Confidence 557889999997 99999999999999999999997766666666 66764 22211 1122232 37999999
Q ss_pred CCcc
Q 042426 158 VGGK 161 (270)
Q Consensus 158 ~g~~ 161 (270)
.|-+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 8853
No 405
>PLN03139 formate dehydrogenase; Provisional
Probab=96.65 E-value=0.052 Score=46.32 Aligned_cols=89 Identities=27% Similarity=0.270 Sum_probs=63.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.|.+|.|+|. |.+|...++.++.+|++|++..++....+... +.|+.. .+ ++.+.+.+ .|+|+-+..
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~----~~--~l~ell~~-----sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKF----EE--DLDAMLPK-----CDVVVINTP 264 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCcee----cC--CHHHHHhh-----CCEEEEeCC
Confidence 4679999996 99999999999999999999887643333333 455421 11 44444433 799988776
Q ss_pred c-c-----hHHHHHHccccCCEEEEEcc
Q 042426 160 G-K-----MLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 160 ~-~-----~~~~~~~~l~~~G~~v~~g~ 181 (270)
. + .-...+..|+++..+|.++.
T Consensus 265 lt~~T~~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 265 LTEKTRGMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred CCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence 3 2 22467889999999999876
No 406
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.64 E-value=0.015 Score=46.23 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=50.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCccE
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGIDI 153 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~ 153 (270)
+++|+|++|++|...++.+...|++|+++ .+++++.+...++ .+.. ...|..+.+++.+.+.+.. .+++|+
T Consensus 3 ~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~ 82 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAA 82 (247)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence 69999999999999999888889998875 4555544433212 2321 2235555424444444332 237899
Q ss_pred EEeCCCc
Q 042426 154 YFENVGG 160 (270)
Q Consensus 154 v~d~~g~ 160 (270)
++.+.|.
T Consensus 83 vi~~ag~ 89 (247)
T PRK09730 83 LVNNAGI 89 (247)
T ss_pred EEECCCC
Confidence 9999984
No 407
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.63 E-value=0.0026 Score=52.10 Aligned_cols=146 Identities=21% Similarity=0.263 Sum_probs=77.5
Q ss_pred CCCCCEEEecccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHH
Q 042426 20 YKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQ 99 (270)
Q Consensus 20 ~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~ 99 (270)
+++|++.+...+|.++-.-+.+. ++.+ ..+ +.|....=+..- ....++.+. ..+|++||=.| +|.|..++-
T Consensus 108 ~~vg~~~~I~P~w~~~~~~~~~~-~I~i-dPg--~AFGTG~H~TT~-lcl~~l~~~--~~~g~~vLDvG--~GSGILaia 178 (295)
T PF06325_consen 108 IRVGDRLVIVPSWEEYPEPPDEI-VIEI-DPG--MAFGTGHHPTTR-LCLELLEKY--VKPGKRVLDVG--CGSGILAIA 178 (295)
T ss_dssp EEECTTEEEEETT----SSTTSE-EEEE-STT--SSS-SSHCHHHH-HHHHHHHHH--SSTTSEEEEES---TTSHHHHH
T ss_pred EEECCcEEEECCCcccCCCCCcE-EEEE-CCC--CcccCCCCHHHH-HHHHHHHHh--ccCCCEEEEeC--CcHHHHHHH
Confidence 45566666666666662223344 5556 334 343222112111 111223222 57789999998 566666655
Q ss_pred HHHHcCC-EEEEEeCCHHHHHHHHHH---hCCCceee-cCCchhHHHHHHhHcCCCccEEEeCCCcc----hHHHHHHcc
Q 042426 100 FVKLVGC-YVVGSARSKEKVDLLKHK---FGFDDAFN-YKEEPDLDAALNRCFPEGIDIYFENVGGK----MLDAVLLNM 170 (270)
Q Consensus 100 la~~~g~-~v~~~~~~~~~~~~~~~~---~g~~~vi~-~~~~~~~~~~i~~~~~~~~d~v~d~~g~~----~~~~~~~~l 170 (270)
.++ +|+ +|++++.++...+.+++- -|...-+. .... +. ..+.||+|+-..-.. ......+++
T Consensus 179 A~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~~-------~~~~~dlvvANI~~~vL~~l~~~~~~~l 249 (295)
T PF06325_consen 179 AAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-DL-------VEGKFDLVVANILADVLLELAPDIASLL 249 (295)
T ss_dssp HHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-CT-------CCS-EEEEEEES-HHHHHHHHHHCHHHE
T ss_pred HHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-cc-------ccccCCEEEECCCHHHHHHHHHHHHHhh
Confidence 555 488 899999888766666521 22221111 1111 11 114699999877654 344556688
Q ss_pred ccCCEEEEEcccc
Q 042426 171 RICGHIAVCGMIS 183 (270)
Q Consensus 171 ~~~G~~v~~g~~~ 183 (270)
+++|.++..|...
T Consensus 250 ~~~G~lIlSGIl~ 262 (295)
T PF06325_consen 250 KPGGYLILSGILE 262 (295)
T ss_dssp EEEEEEEEEEEEG
T ss_pred CCCCEEEEccccH
Confidence 9999999998854
No 408
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.022 Score=45.38 Aligned_cols=80 Identities=16% Similarity=0.196 Sum_probs=50.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--EGI 151 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~ 151 (270)
+.+++|+|++|++|..+++.+...|++|+... +++++.+.+.+ ..+.. ...|..+..++.+.+.+... +.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 35799999999999999998888899887765 34444333321 22332 12344444234444433221 368
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999874
No 409
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.62 E-value=0.015 Score=48.26 Aligned_cols=81 Identities=19% Similarity=0.196 Sum_probs=50.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc-CCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF-PEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~-~~~~ 151 (270)
.+.+++|+|+++++|...++.+...|++|++.+++. ++.+.+.++ .|.. ...|..+.++..+.+.+.. .+++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 357899999999999999998888899999987642 333332222 2322 1123444312222222211 2469
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|++++++|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999999873
No 410
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.60 E-value=0.028 Score=47.01 Aligned_cols=93 Identities=15% Similarity=0.110 Sum_probs=63.9
Q ss_pred CCcEEEEecCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHh----CCCceeecCCchhHHHHHHhHcCCCccE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFV-KLVGC-YVVGSARSKEKVDLLKHKF----GFDDAFNYKEEPDLDAALNRCFPEGIDI 153 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la-~~~g~-~v~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~~~~~d~ 153 (270)
...+++|+|+ |..|.+.+..+ ...++ +|.+..+++++.+.+.+++ +.. +..+. ++.+.+. ..|+
T Consensus 126 ~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aDi 195 (325)
T PRK08618 126 DAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EADI 195 (325)
T ss_pred CCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCCE
Confidence 4568999996 99998777554 45677 8888899988877665444 332 22222 4444443 3899
Q ss_pred EEeCCCcchHHHHHHccccCCEEEEEcccc
Q 042426 154 YFENVGGKMLDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 154 v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 183 (270)
|+.|++...-... ..++++-++..+|...
T Consensus 196 Vi~aT~s~~p~i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 196 IVTVTNAKTPVFS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred EEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence 9999987533334 8889998998998743
No 411
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.019 Score=45.67 Aligned_cols=80 Identities=21% Similarity=0.264 Sum_probs=49.5
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--C
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR----SKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--P 148 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~----~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~ 148 (270)
+.+++|+||+|++|+..++.+...|++|+++.+ +.++.+.+.+++ +.. ...|..+.....+.+.+.. .
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF 85 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 468999999999999999988889999988654 333333332222 222 1234444323333333221 1
Q ss_pred CCccEEEeCCCc
Q 042426 149 EGIDIYFENVGG 160 (270)
Q Consensus 149 ~~~d~v~d~~g~ 160 (270)
+++|.++.++|.
T Consensus 86 ~~~d~vi~~ag~ 97 (249)
T PRK12827 86 GRLDILVNNAGI 97 (249)
T ss_pred CCCCEEEECCCC
Confidence 368999999873
No 412
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.59 E-value=0.012 Score=49.06 Aligned_cols=75 Identities=19% Similarity=0.353 Sum_probs=49.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-C--ce--eecCCchhHHHHHHhHcCCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF-D--DA--FNYKEEPDLDAALNRCFPEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~-~--~v--i~~~~~~~~~~~i~~~~~~~~ 151 (270)
.+.++||+||+|.+|..+++.+...|++|++++++..+.+...+.. +. . .. .|..+..++.+.+. ++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~ 78 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-----GC 78 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-----CC
Confidence 3678999999999999999999888999998887765433222111 11 1 11 24444312333332 38
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|+|+.+++
T Consensus 79 d~vih~A~ 86 (325)
T PLN02989 79 ETVFHTAS 86 (325)
T ss_pred CEEEEeCC
Confidence 99999987
No 413
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.58 E-value=0.093 Score=40.59 Aligned_cols=80 Identities=19% Similarity=0.270 Sum_probs=55.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.|.+++|.|. |.+|..+++.+...|++|+++++++++.+.+.+.+|+. .++..+ + +. ..+|+++.|..
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~---l---~~----~~~Dv~vp~A~ 94 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPEE---I---YS----VDADVFAPCAL 94 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcchh---h---cc----ccCCEEEeccc
Confidence 4678999998 89999999999999999999998888888777566643 333211 1 10 13888886654
Q ss_pred cc-hHHHHHHccc
Q 042426 160 GK-MLDAVLLNMR 171 (270)
Q Consensus 160 ~~-~~~~~~~~l~ 171 (270)
+. .....++.++
T Consensus 95 ~~~I~~~~~~~l~ 107 (200)
T cd01075 95 GGVINDDTIPQLK 107 (200)
T ss_pred ccccCHHHHHHcC
Confidence 43 3344445553
No 414
>PLN02244 tocopherol O-methyltransferase
Probab=96.58 E-value=0.021 Score=48.06 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=65.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCccEEE
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGIDIYF 155 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~ 155 (270)
+++++||=+| +|.|..+..+++..|++|++++.++...+.+++. .+...-+..... +... + ....+.||+|+
T Consensus 117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~-~-~~~~~~FD~V~ 191 (340)
T PLN02244 117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN-Q-PFEDGQFDLVW 191 (340)
T ss_pred CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc-C-CCCCCCccEEE
Confidence 6788999888 6778888899988899999999999877766522 233211222111 1111 0 01123699998
Q ss_pred eCCCc-------chHHHHHHccccCCEEEEEcc
Q 042426 156 ENVGG-------KMLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 156 d~~g~-------~~~~~~~~~l~~~G~~v~~g~ 181 (270)
..... ..+..+.+.|+|||+++...+
T Consensus 192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 64331 267788999999999987654
No 415
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=96.57 E-value=0.049 Score=46.11 Aligned_cols=98 Identities=17% Similarity=0.181 Sum_probs=64.2
Q ss_pred cEEEEecCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHhCCCceeecCCc--hhHHH--------------
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLV--GCYVVGSA--RSKEKVDLLKHKFGFDDAFNYKEE--PDLDA-------------- 141 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~--~~~~~~~~~~~~~g~~~vi~~~~~--~~~~~-------------- 141 (270)
.+|.|.|+||++|..++...+.. .++|++.+ ++.+++....++++...+.-..+. ..+.+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 47999999999999999988765 56888886 344455544457887655433321 01111
Q ss_pred HHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426 142 ALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 142 ~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 179 (270)
.+.+.... .+|+|+.++++ ..+...+..++.|-++.+.
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 11222222 58999999977 4677788888888776664
No 416
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.57 E-value=0.048 Score=42.35 Aligned_cols=89 Identities=20% Similarity=0.152 Sum_probs=57.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
|.+|+|.|+ |.+|..-++.+...|++|++++.... ....+. +.|- ..+-.++. . ...+ .++++|+-+++
T Consensus 9 gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~-i~~~~~~~-~-~~dl-----~~~~lVi~at~ 78 (205)
T TIGR01470 9 GRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGG-ITWLARCF-D-ADIL-----EGAFLVIAATD 78 (205)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCC-EEEEeCCC-C-HHHh-----CCcEEEEECCC
Confidence 578999998 99999999999999999999886432 333333 2231 11111222 1 1111 25899999999
Q ss_pred cc-hHHHHHHccccCCEEEEE
Q 042426 160 GK-MLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 160 ~~-~~~~~~~~l~~~G~~v~~ 179 (270)
.+ .-.......+..|.++.+
T Consensus 79 d~~ln~~i~~~a~~~~ilvn~ 99 (205)
T TIGR01470 79 DEELNRRVAHAARARGVPVNV 99 (205)
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 86 444555555666777754
No 417
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.016 Score=46.10 Aligned_cols=75 Identities=20% Similarity=0.224 Sum_probs=48.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHh----H-cC-CCccE
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNR----C-FP-EGIDI 153 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~----~-~~-~~~d~ 153 (270)
+++|+|++|++|..+++.+...|++|++++++.++. ... ..+.. ...|..+..++...+.+ . .. +..|+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 699999999999999999888899999999875532 222 33322 12355544233332222 1 22 26788
Q ss_pred EEeCCC
Q 042426 154 YFENVG 159 (270)
Q Consensus 154 v~d~~g 159 (270)
++.+.|
T Consensus 81 ~v~~ag 86 (243)
T PRK07023 81 LINNAG 86 (243)
T ss_pred EEEcCc
Confidence 888876
No 418
>PLN00203 glutamyl-tRNA reductase
Probab=96.55 E-value=0.068 Score=47.51 Aligned_cols=74 Identities=27% Similarity=0.394 Sum_probs=52.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
+.+|+|+|+ |.+|.++++.+...|+ +|+++.++.++.+.+.++++... +......+..+.+. ++|+||.|++
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~-i~~~~~~dl~~al~-----~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVE-IIYKPLDEMLACAA-----EADVVFTSTS 338 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCc-eEeecHhhHHHHHh-----cCCEEEEccC
Confidence 578999998 9999999999998997 89999999998887775664211 11111102323332 3899999987
Q ss_pred cc
Q 042426 160 GK 161 (270)
Q Consensus 160 ~~ 161 (270)
..
T Consensus 339 s~ 340 (519)
T PLN00203 339 SE 340 (519)
T ss_pred CC
Confidence 63
No 419
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.55 E-value=0.036 Score=45.99 Aligned_cols=89 Identities=18% Similarity=0.285 Sum_probs=60.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.+|.|+|+ |.+|.+.+..++..|. +|++..+++++.+.++ +.|....+. . +..+.+. .+|+|+.|+.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~---~-~~~~~~~-----~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT---T-SAAEAVK-----GADLVILCVP 75 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec---C-CHHHHhc-----CCCEEEECCC
Confidence 57999996 9999999998888885 8999999988888887 677521111 1 2222222 3899999987
Q ss_pred cch----HHHHHHccccCCEEEEEcc
Q 042426 160 GKM----LDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 160 ~~~----~~~~~~~l~~~G~~v~~g~ 181 (270)
... +......++++..++.++.
T Consensus 76 ~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 643 3333345566666666654
No 420
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.53 E-value=0.14 Score=39.40 Aligned_cols=102 Identities=18% Similarity=0.237 Sum_probs=63.2
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCC
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPE 149 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~ 149 (270)
...+++++++||=.| +|.|..++.+++.. +.+|+++..+++..+.+++ +++..++ ..... +..+.+.....
T Consensus 34 ~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v-~~~~~-d~~~~~~~~~~- 108 (196)
T PRK07402 34 SQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNV-EVIEG-SAPECLAQLAP- 108 (196)
T ss_pred HhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCe-EEEEC-chHHHHhhCCC-
Confidence 445677889988887 56666677777654 5699999999988777763 3454432 12111 33332322221
Q ss_pred CccE-EEeCCCc--chHHHHHHccccCCEEEEEc
Q 042426 150 GIDI-YFENVGG--KMLDAVLLNMRICGHIAVCG 180 (270)
Q Consensus 150 ~~d~-v~d~~g~--~~~~~~~~~l~~~G~~v~~g 180 (270)
.+|. +++.... ..++.+.+.|+++|+++...
T Consensus 109 ~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 109 APDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred CCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 2344 4443222 46788899999999988763
No 421
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.52 E-value=0.019 Score=45.62 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=49.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhC---CC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFG---FD---DAFNYKEEPDLDAALNRCF--PEGID 152 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g---~~---~vi~~~~~~~~~~~i~~~~--~~~~d 152 (270)
.+++|+|++|++|..+++.+...|++|+++.++.. ..+...+... .. ...|..+.....+.+.+.. .+.+|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 37999999999999999988888999999998743 2222221222 11 1234444323333333321 13589
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12824 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99998873
No 422
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.035 Score=42.74 Aligned_cols=63 Identities=21% Similarity=0.288 Sum_probs=43.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
+++|.|+++++|..++..+... .+|+++++++. ....|..+.++..+.+.+. +++|+++.+.|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~id~lv~~ag 64 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKV--GKVDAVVSAAG 64 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhc--CCCCEEEECCC
Confidence 6899999999999888877766 89999987642 1123444442333333332 35889988887
No 423
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.52 E-value=0.046 Score=45.43 Aligned_cols=88 Identities=16% Similarity=0.125 Sum_probs=62.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.|.+|.|+|. |.+|...++.++.+|++|++..++.++.. +..... ... ++.+.+.+ .|+|+.+..
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~--~~~-~l~e~l~~-----aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA--GRE-ELSAFLSQ-----TRVLINLLP 199 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec--ccc-cHHHHHhc-----CCEEEECCC
Confidence 4679999997 99999999999999999999886543211 111111 111 44444443 899999887
Q ss_pred c-c-----hHHHHHHccccCCEEEEEccc
Q 042426 160 G-K-----MLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 160 ~-~-----~~~~~~~~l~~~G~~v~~g~~ 182 (270)
. + .-...++.|+++..++.++..
T Consensus 200 lt~~T~~li~~~~l~~mk~ga~lIN~aRG 228 (312)
T PRK15469 200 NTPETVGIINQQLLEQLPDGAYLLNLARG 228 (312)
T ss_pred CCHHHHHHhHHHHHhcCCCCcEEEECCCc
Confidence 4 2 224578899999999998873
No 424
>PLN02928 oxidoreductase family protein
Probab=96.50 E-value=0.087 Score=44.49 Aligned_cols=93 Identities=19% Similarity=0.182 Sum_probs=63.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-----Cceee--cCCchhHHHHHHhHcCCCcc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF-----DDAFN--YKEEPDLDAALNRCFPEGID 152 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~-----~~vi~--~~~~~~~~~~i~~~~~~~~d 152 (270)
.|.++.|+|. |.+|+.+++.++.+|++|++..++...... . .++. ....+ .... ++.+.+.+ .|
T Consensus 158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-~L~ell~~-----aD 228 (347)
T PLN02928 158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPE-D-GLLIPNGDVDDLVDEKGGHE-DIYEFAGE-----AD 228 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhh-h-hhccccccccccccccCccc-CHHHHHhh-----CC
Confidence 4789999997 999999999999999999999876322111 1 1110 00000 0111 45555544 89
Q ss_pred EEEeCCCc-c-----hHHHHHHccccCCEEEEEcc
Q 042426 153 IYFENVGG-K-----MLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 153 ~v~d~~g~-~-----~~~~~~~~l~~~G~~v~~g~ 181 (270)
+|+.++.. + .-...++.|+++..+|.++.
T Consensus 229 iVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 229 IVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred EEEECCCCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 99998863 1 23578889999999999876
No 425
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=96.50 E-value=0.017 Score=47.02 Aligned_cols=73 Identities=23% Similarity=0.274 Sum_probs=46.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC----CCce--------eecCCchhHHHHHHhHcCC-
Q 042426 84 VYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFG----FDDA--------FNYKEEPDLDAALNRCFPE- 149 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g----~~~v--------i~~~~~~~~~~~i~~~~~~- 149 (270)
|||+||+|++|..+++.+..++. +++++++++.++-.+++++. ...+ -|.++. +.+.+....
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~----~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDK----ERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHH----HHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCH----HHHHHHHhhc
Confidence 79999999999988887777775 89999999988877776662 1111 133333 344444444
Q ss_pred CccEEEeCCCc
Q 042426 150 GIDIYFENVGG 160 (270)
Q Consensus 150 ~~d~v~d~~g~ 160 (270)
++|+||.++.-
T Consensus 77 ~pdiVfHaAA~ 87 (293)
T PF02719_consen 77 KPDIVFHAAAL 87 (293)
T ss_dssp T-SEEEE----
T ss_pred CCCEEEEChhc
Confidence 79999998874
No 426
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.49 E-value=0.11 Score=42.53 Aligned_cols=106 Identities=14% Similarity=0.170 Sum_probs=73.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----CceeecCCchh---HHHHHHhHcCC-Cc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF----DDAFNYKEEPD---LDAALNRCFPE-GI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~---~~~~i~~~~~~-~~ 151 (270)
++..|+|+|..+|.|..++.-+...|.+|++.|-.++..+.++.+... +--+|..++++ ..+.+++..+. +.
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL 107 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL 107 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence 355799999999999999999999999999999887777777633311 12345554423 34455666655 77
Q ss_pred cEEEeCCCcc---------------------------hHHHHHHcccc-CCEEEEEcccccc
Q 042426 152 DIYFENVGGK---------------------------MLDAVLLNMRI-CGHIAVCGMISQY 185 (270)
Q Consensus 152 d~v~d~~g~~---------------------------~~~~~~~~l~~-~G~~v~~g~~~~~ 185 (270)
=-++|++|.. .....+.++++ .||+|.+++..+.
T Consensus 108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 7889988821 12334445554 5999999887653
No 427
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.49 E-value=0.03 Score=46.81 Aligned_cols=94 Identities=19% Similarity=0.184 Sum_probs=62.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVK-LVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE 156 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~-~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d 156 (270)
-.+.+|+|+||+|.+|..+++.+. ..|. +++++.++.++...+.++++...+. ++.+.+. ..|+|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~-----~aDiVv~ 221 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALP-----EADIVVW 221 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHc-----cCCEEEE
Confidence 356899999999999998888775 4565 8999999888887776555422221 2333332 3899999
Q ss_pred CCCcc-hHHHHHHccccCCEEEEEcccc
Q 042426 157 NVGGK-MLDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 157 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~ 183 (270)
+++.. .+..-...+++.-.++.++.+-
T Consensus 222 ~ts~~~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 222 VASMPKGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred CCcCCcCCcCCHHHhCCCeEEEEecCCC
Confidence 98863 2212223446666777777643
No 428
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.49 E-value=0.017 Score=48.12 Aligned_cols=75 Identities=24% Similarity=0.371 Sum_probs=48.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--C-c--eeecCCchhHHHHHHhHcCCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF--D-D--AFNYKEEPDLDAALNRCFPEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~--~-~--vi~~~~~~~~~~~i~~~~~~~~ 151 (270)
.|.+|+|+||+|.+|..+++.+...|.+|+++.++..+.+.+.+.. +. . . ..|..+...+.+.+. ++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~ 78 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-----GC 78 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-----CC
Confidence 4679999999999999999988888999999888765433332111 11 1 1 123333312333332 38
Q ss_pred cEEEeCCC
Q 042426 152 DIYFENVG 159 (270)
Q Consensus 152 d~v~d~~g 159 (270)
|+||.+++
T Consensus 79 d~vih~A~ 86 (322)
T PLN02986 79 DAVFHTAS 86 (322)
T ss_pred CEEEEeCC
Confidence 99999886
No 429
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.033 Score=43.66 Aligned_cols=76 Identities=16% Similarity=0.244 Sum_probs=50.6
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC-ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-FD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.+++|+|++|.+|..++..+... .+|+++.++.++.+.+.++.. .. ...|..+..++.+.+... +++|.++.++|
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ag 80 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNAG 80 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 47999999999999988877666 999999998877665553332 21 123444432333333221 25899999987
Q ss_pred c
Q 042426 160 G 160 (270)
Q Consensus 160 ~ 160 (270)
.
T Consensus 81 ~ 81 (227)
T PRK08219 81 V 81 (227)
T ss_pred c
Confidence 4
No 430
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.48 E-value=0.016 Score=47.48 Aligned_cols=95 Identities=11% Similarity=0.098 Sum_probs=61.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC-CC-ccEEEeCCC
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP-EG-IDIYFENVG 159 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~-~~-~d~v~d~~g 159 (270)
+|+|+||+|.+|..+++.+...|.+|.+.+|++++.. ..+.. ...|+.+.+.+.+.++.... .+ +|.+|-+.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~ 76 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP 76 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence 4899999999999999998888999999999876532 22332 23466665344444432211 25 899987776
Q ss_pred cc-----hHHHHHHccccCC--EEEEEcc
Q 042426 160 GK-----MLDAVLLNMRICG--HIAVCGM 181 (270)
Q Consensus 160 ~~-----~~~~~~~~l~~~G--~~v~~g~ 181 (270)
.. .....++.++..| ++|.++.
T Consensus 77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 31 2334444444444 7887764
No 431
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.48 E-value=0.022 Score=45.41 Aligned_cols=106 Identities=14% Similarity=0.223 Sum_probs=67.1
Q ss_pred hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHH-HHHHh
Q 042426 72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLD-AALNR 145 (270)
Q Consensus 72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~-~~i~~ 145 (270)
+....++.||++|+=-| .|.|.+...+++..| -+|+....+++..+.+++. .|....+..... |.. +.+.+
T Consensus 32 I~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--ST
T ss_pred HHHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccc
Confidence 43567899999998877 667888888888776 3999999999988777643 455432222221 221 12211
Q ss_pred HcCCCccEEEeCCCcc--hHHHHHHcc-ccCCEEEEEc
Q 042426 146 CFPEGIDIYFENVGGK--MLDAVLLNM-RICGHIAVCG 180 (270)
Q Consensus 146 ~~~~~~d~v~d~~g~~--~~~~~~~~l-~~~G~~v~~g 180 (270)
...+.+|.||==...+ .+..+.+.| +++|+++.+.
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs 146 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS 146 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence 1123588887655554 889999999 8999998873
No 432
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.47 E-value=0.039 Score=48.13 Aligned_cols=45 Identities=20% Similarity=0.389 Sum_probs=36.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF 127 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~ 127 (270)
+|.|+||.|.+|.+.+..++..|.+|++.++++++.....+++|.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv 46 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGV 46 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCC
Confidence 589999789999999999999999999999887775333326664
No 433
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.024 Score=45.30 Aligned_cols=41 Identities=20% Similarity=0.386 Sum_probs=34.0
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLK 122 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~ 122 (270)
.+++|+|++|++|..+++.+...|++|+++++++ ++.+.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~ 43 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA 43 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence 3699999999999999999888899999999876 4444443
No 434
>PRK04457 spermidine synthase; Provisional
Probab=96.46 E-value=0.066 Score=43.34 Aligned_cols=96 Identities=10% Similarity=0.133 Sum_probs=64.7
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcCCCccEE
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFPEGIDIY 154 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~v 154 (270)
.++.+||++| +|.|..+..+++.. +.+++++..+++-.+.+++.++.. .-+..... |..+.+.+. ++.||+|
T Consensus 65 ~~~~~vL~IG--~G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIG--LGGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEEC--CCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEE
Confidence 3457899999 45688888888776 469999999999999888555531 11112222 444444432 3468988
Q ss_pred E-eCCC----------cchHHHHHHccccCCEEEE
Q 042426 155 F-ENVG----------GKMLDAVLLNMRICGHIAV 178 (270)
Q Consensus 155 ~-d~~g----------~~~~~~~~~~l~~~G~~v~ 178 (270)
+ |... .+.++.+.+.|+|+|+++.
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 6 3221 1367888999999999986
No 435
>PRK01581 speE spermidine synthase; Validated
Probab=96.45 E-value=0.08 Score=44.57 Aligned_cols=97 Identities=12% Similarity=0.110 Sum_probs=62.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC---------C-CceeecCCchhHHHHHHhHc
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFG---------F-DDAFNYKEEPDLDAALNRCF 147 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g---------~-~~vi~~~~~~~~~~~i~~~~ 147 (270)
....+|||+| ||.|..+..++++.+. +|+++..+++-.+.++ ++. . +.-+..... |..+.+.. .
T Consensus 149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-~ 223 (374)
T PRK01581 149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-P 223 (374)
T ss_pred CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-c
Confidence 3446899999 5677777888887654 9999999988888887 421 1 111111111 33344433 3
Q ss_pred CCCccEEEeCCCc------------chHHHHHHccccCCEEEEEc
Q 042426 148 PEGIDIYFENVGG------------KMLDAVLLNMRICGHIAVCG 180 (270)
Q Consensus 148 ~~~~d~v~d~~g~------------~~~~~~~~~l~~~G~~v~~g 180 (270)
.+.||+||--... +.++.+.+.|+|+|.++.-.
T Consensus 224 ~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 224 SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 3479998654321 15678899999999987653
No 436
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.44 E-value=0.027 Score=45.28 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=29.8
Q ss_pred CcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 042426 81 GEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARS 114 (270)
Q Consensus 81 g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~ 114 (270)
+.+++|+||+ |++|...+..+...|++|++++++
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 4689999998 489999998888889999999876
No 437
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=96.42 E-value=0.017 Score=45.35 Aligned_cols=98 Identities=12% Similarity=0.061 Sum_probs=62.6
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--------------eecCCchhHHHH
Q 042426 77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA--------------FNYKEEPDLDAA 142 (270)
Q Consensus 77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--------------i~~~~~~~~~~~ 142 (270)
.+.++.+||+.| +|.|.-++.||. +|++|++++.++...+.+.++.+.... ++.... |+.+.
T Consensus 34 ~~~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG-DFFAL 109 (218)
T ss_pred CCCCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC-cccCC
Confidence 345678999998 788988888886 699999999999988766434443210 111001 11110
Q ss_pred HHhHcCCCccEEEeCCC---------cchHHHHHHccccCCEEEEE
Q 042426 143 LNRCFPEGIDIYFENVG---------GKMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 143 i~~~~~~~~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~ 179 (270)
.....+.||.|+|... ...+....++|+|+|++..+
T Consensus 110 -~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 110 -TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred -CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 0001125899999664 12578888999999875543
No 438
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.40 E-value=0.025 Score=47.88 Aligned_cols=76 Identities=22% Similarity=0.236 Sum_probs=50.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CC-ce--eecCCchhHHHHHHhHcCCCccE
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG--FD-DA--FNYKEEPDLDAALNRCFPEGIDI 153 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g--~~-~v--i~~~~~~~~~~~i~~~~~~~~d~ 153 (270)
..+.+|||+|++|.+|..+++.+...|.+|+++.++.++.+.+.+.+. .. .. .|..+...+.+.+. ++|.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~ 82 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-----GCDG 82 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-----CCCE
Confidence 456789999999999999999998889999999887765554432321 11 11 23333212222222 3899
Q ss_pred EEeCCC
Q 042426 154 YFENVG 159 (270)
Q Consensus 154 v~d~~g 159 (270)
||.+++
T Consensus 83 Vih~A~ 88 (353)
T PLN02896 83 VFHVAA 88 (353)
T ss_pred EEECCc
Confidence 999886
No 439
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.38 E-value=0.069 Score=42.19 Aligned_cols=91 Identities=14% Similarity=0.209 Sum_probs=59.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCC----HHH--------HHHHHHHhCCCceeecCCchhHHHHH
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGC---YVVGSARS----KEK--------VDLLKHKFGFDDAFNYKEEPDLDAAL 143 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~---~v~~~~~~----~~~--------~~~~~~~~g~~~vi~~~~~~~~~~~i 143 (270)
-.+.+++|+|+ |+.|..++..+...|+ +++++.++ .++ .++++ .++... .+ . ++.+.+
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~---~-~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG---G-TLKEAL 95 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc---C-CHHHHH
Confidence 35679999998 9999999998888897 48888887 333 22233 333211 11 1 343444
Q ss_pred HhHcCCCccEEEeCCCcchH-HHHHHccccCCEEEEEcc
Q 042426 144 NRCFPEGIDIYFENVGGKML-DAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 144 ~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~ 181 (270)
. ++|+++++++...+ ...++.++++..++.+.+
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsn 129 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALAN 129 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCC
Confidence 2 38999999974333 466777777776665543
No 440
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=96.38 E-value=0.3 Score=40.15 Aligned_cols=91 Identities=12% Similarity=0.038 Sum_probs=53.6
Q ss_pred cEEEEecCCchHHHH-HHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 82 EYVYVSAASGAVGQL-VGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~-ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
-++.|+| +|.+|.. +..+.+.-+.++.+++..+. ..+.++ ++|..... . ++...+.+....++|+||++
T Consensus 5 lrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~-~~Gi~~~~--~---~ie~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARAR-RLGVATSA--E---GIDGLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHH-HcCCCccc--C---CHHHHHhCcCCCCCCEEEEC
Confidence 3689999 5999986 44455555678887774432 234555 77754222 1 34444432111359999999
Q ss_pred CCcc-hHHHHHHccccCCEEEEE
Q 042426 158 VGGK-MLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 158 ~g~~-~~~~~~~~l~~~G~~v~~ 179 (270)
++.. ..+.+..+...|-+++..
T Consensus 78 T~a~~H~e~a~~a~eaGk~VID~ 100 (302)
T PRK08300 78 TSAGAHVRHAAKLREAGIRAIDL 100 (302)
T ss_pred CCHHHHHHHHHHHHHcCCeEEEC
Confidence 9986 444444454455455443
No 441
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=96.38 E-value=0.022 Score=44.93 Aligned_cols=74 Identities=16% Similarity=0.249 Sum_probs=52.6
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426 84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 160 (270)
|||+||+|-+|..++..+...|.+|+...++..+......+.... ...|..+.+.+.+.+... .+|.||.+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence 799999999999999999999999998888776655544233322 234555542444444443 48999999874
No 442
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.36 E-value=0.023 Score=44.93 Aligned_cols=77 Identities=22% Similarity=0.290 Sum_probs=48.7
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426 84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY 154 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v 154 (270)
++|+|++|++|..+++.+...|++|+++.++. ++.+...+ ..+.. ...|..+..++.+.+.+.. .+++|.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999888899999998764 33322221 23421 2235554423333333221 1358999
Q ss_pred EeCCCc
Q 042426 155 FENVGG 160 (270)
Q Consensus 155 ~d~~g~ 160 (270)
+.+.|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 998884
No 443
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.33 E-value=0.055 Score=44.01 Aligned_cols=96 Identities=20% Similarity=0.174 Sum_probs=66.0
Q ss_pred ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426 60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL 139 (270)
Q Consensus 60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~ 139 (270)
-+|+........|....---.|.+++|.|.+.-+|.-++.++...|++|++.-+ ++. ++
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs--------------------~t~-~l 195 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS--------------------KTR-DL 195 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC--------------------CCC-CH
Confidence 345554444444533222236899999999888899999999999999887431 112 34
Q ss_pred HHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEccc
Q 042426 140 DAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 140 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 182 (270)
.+.+++ .|+|+-++|.+.+-. -+.++++..++.+|..
T Consensus 196 ~~~~~~-----ADIVV~avG~~~~i~-~~~ik~gavVIDVGin 232 (285)
T PRK14189 196 AAHTRQ-----ADIVVAAVGKRNVLT-ADMVKPGATVIDVGMN 232 (285)
T ss_pred HHHhhh-----CCEEEEcCCCcCccC-HHHcCCCCEEEEcccc
Confidence 444443 899999999864422 3889999999998863
No 444
>PLN02686 cinnamoyl-CoA reductase
Probab=96.33 E-value=0.031 Score=47.63 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=36.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK 122 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~ 122 (270)
..+.+|||+||+|.+|..+++.+...|++|+++.++.++.+.++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 44679999999999999999999989999999887766655444
No 445
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=96.32 E-value=0.06 Score=43.40 Aligned_cols=96 Identities=17% Similarity=0.226 Sum_probs=63.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCccEEE
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGIDIYF 155 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~ 155 (270)
.++.+||-.| +|.|..+..+++. |.+|++++.+++..+.+++.. |...-+..... +..+ +.....+.||+|+
T Consensus 43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~-l~~~~~~~fD~V~ 117 (255)
T PRK11036 43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQD-IAQHLETPVDLIL 117 (255)
T ss_pred CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHH-HhhhcCCCCCEEE
Confidence 4567888888 7788888888875 889999999998888777332 32111111111 2222 2222234699998
Q ss_pred eCCC-----c--chHHHHHHccccCCEEEEE
Q 042426 156 ENVG-----G--KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 156 d~~g-----~--~~~~~~~~~l~~~G~~v~~ 179 (270)
.... . ..+..+.+.|+|+|.++.+
T Consensus 118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 5432 2 2678899999999999765
No 446
>PRK07574 formate dehydrogenase; Provisional
Probab=96.31 E-value=0.037 Score=47.23 Aligned_cols=89 Identities=16% Similarity=0.136 Sum_probs=61.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.|.+|.|+|. |.+|+.+++.++.+|.+|++..++....+..+ .+|... .. ++.+.+.+ .|+|+-+..
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~----~~--~l~ell~~-----aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY----HV--SFDSLVSV-----CDVVTIHCP 257 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee----cC--CHHHHhhc-----CCEEEEcCC
Confidence 3678999997 99999999999999999999997753333333 444321 11 34444433 788888776
Q ss_pred c-c----h-HHHHHHccccCCEEEEEcc
Q 042426 160 G-K----M-LDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 160 ~-~----~-~~~~~~~l~~~G~~v~~g~ 181 (270)
. + . -...+..|+++..+|.++.
T Consensus 258 lt~~T~~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence 3 2 1 2456778888888888765
No 447
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.29 E-value=0.049 Score=44.67 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=46.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK---EKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDI 153 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~---~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~ 153 (270)
++.+++|+|+ ||.+.+++..+...|+ +++++.|++ ++.+.+.++++.. ..+..... +-.+.+.+.. ..+|+
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~~-~~aDi 199 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEAL-ASADI 199 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhhc-ccCCE
Confidence 4568999997 8889987777777898 899999984 3555554455431 11111111 1011122111 24899
Q ss_pred EEeCCC
Q 042426 154 YFENVG 159 (270)
Q Consensus 154 v~d~~g 159 (270)
|++|+.
T Consensus 200 vINaTp 205 (288)
T PRK12749 200 LTNGTK 205 (288)
T ss_pred EEECCC
Confidence 999885
No 448
>PLN00016 RNA-binding protein; Provisional
Probab=96.28 E-value=0.038 Score=47.28 Aligned_cols=96 Identities=17% Similarity=0.225 Sum_probs=60.4
Q ss_pred CcEEEEe----cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----------HHhCCCceeecCCchhHHHHHHhH
Q 042426 81 GEYVYVS----AASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK----------HKFGFDDAFNYKEEPDLDAALNRC 146 (270)
Q Consensus 81 g~~vlI~----ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~----------~~~g~~~vi~~~~~~~~~~~i~~~ 146 (270)
..+|||+ ||+|-+|..++..+...|.+|++++++......+. ...+...+. . |+.+ +.+.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~--~---D~~d-~~~~ 125 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW--G---DPAD-VKSK 125 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE--e---cHHH-HHhh
Confidence 3579999 99999999999988888999999998765432211 022332221 1 2222 2222
Q ss_pred cCC-CccEEEeCCCcc--hHHHHHHccccC--CEEEEEccc
Q 042426 147 FPE-GIDIYFENVGGK--MLDAVLLNMRIC--GHIAVCGMI 182 (270)
Q Consensus 147 ~~~-~~d~v~d~~g~~--~~~~~~~~l~~~--G~~v~~g~~ 182 (270)
... ++|+|+++.+.. .....++.++.. .+++.++..
T Consensus 126 ~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 126 VAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred hccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 223 699999998753 344455555433 378877654
No 449
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.26 E-value=0.0079 Score=41.13 Aligned_cols=86 Identities=19% Similarity=0.305 Sum_probs=55.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.|.+|||.|+ |.+|..-++.+...|++|++++... +..+ +. +..... .+.+.+ .++++|+-+.+
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~---i~~~~~-~~~~~l-----~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GL---IQLIRR-EFEEDL-----DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TS---CEEEES-S-GGGC-----TTESEEEE-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hH---HHHHhh-hHHHHH-----hhheEEEecCC
Confidence 3678999998 9999999999999999999999775 2222 11 112222 332111 25999999998
Q ss_pred cchHHHHH-HccccCCEEEEEcc
Q 042426 160 GKMLDAVL-LNMRICGHIAVCGM 181 (270)
Q Consensus 160 ~~~~~~~~-~~l~~~G~~v~~g~ 181 (270)
.+.++..+ ...+..|.++....
T Consensus 70 d~~~n~~i~~~a~~~~i~vn~~D 92 (103)
T PF13241_consen 70 DPELNEAIYADARARGILVNVVD 92 (103)
T ss_dssp -HHHHHHHHHHHHHTTSEEEETT
T ss_pred CHHHHHHHHHHHhhCCEEEEECC
Confidence 87555444 45555788888754
No 450
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.26 E-value=0.033 Score=44.13 Aligned_cols=76 Identities=16% Similarity=0.137 Sum_probs=47.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426 84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY 154 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v 154 (270)
++|+|++|++|..+++.+...|++|++++++ +++.+.+.++ .+.. ...|..+..+....+.+.. .+..|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999999899999988865 3333333222 2322 1234444423333333221 2357889
Q ss_pred EeCCC
Q 042426 155 FENVG 159 (270)
Q Consensus 155 ~d~~g 159 (270)
+.+.|
T Consensus 81 i~~ag 85 (239)
T TIGR01831 81 VLNAG 85 (239)
T ss_pred EECCC
Confidence 88876
No 451
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.25 E-value=0.038 Score=46.86 Aligned_cols=80 Identities=14% Similarity=0.115 Sum_probs=49.1
Q ss_pred CCCcEEEEecCCchHHHH--HHHHHHHcCCEEEEEeCCHH--H-------------H-HHHHHHhCCC-ce--eecCCch
Q 042426 79 KKGEYVYVSAASGAVGQL--VGQFVKLVGCYVVGSARSKE--K-------------V-DLLKHKFGFD-DA--FNYKEEP 137 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~--ai~la~~~g~~v~~~~~~~~--~-------------~-~~~~~~~g~~-~v--i~~~~~~ 137 (270)
..+.++||+|+++++|++ .++.+ ..|++++++....+ + . +.++ +.|.. .. .|-.+..
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence 345799999999999999 56666 88999888874221 1 1 2233 55543 11 2444432
Q ss_pred hHH---HHHHhHcCCCccEEEeCCCcc
Q 042426 138 DLD---AALNRCFPEGIDIYFENVGGK 161 (270)
Q Consensus 138 ~~~---~~i~~~~~~~~d~v~d~~g~~ 161 (270)
... +.+.+.. |++|+++++++.+
T Consensus 117 ~v~~lie~I~e~~-G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDL-GQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 233 3333322 4699999999864
No 452
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.24 E-value=0.036 Score=44.61 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=49.4
Q ss_pred CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHH---HhCCC---ceeecCCchhHH
Q 042426 80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARS-----------KEKVDLLKH---KFGFD---DAFNYKEEPDLD 140 (270)
Q Consensus 80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~-----------~~~~~~~~~---~~g~~---~vi~~~~~~~~~ 140 (270)
+|.+++|+|++ +++|...++.+...|++|++++++ .++.+.+.+ +.|.. ...|..+.++..
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~ 84 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK 84 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 46789999997 499999999999999999987532 122212211 33432 123444442444
Q ss_pred HHHHhHcC--CCccEEEeCCC
Q 042426 141 AALNRCFP--EGIDIYFENVG 159 (270)
Q Consensus 141 ~~i~~~~~--~~~d~v~d~~g 159 (270)
+.+.+... +..|+++.++|
T Consensus 85 ~~~~~~~~~~g~id~li~~ag 105 (256)
T PRK12859 85 ELLNKVTEQLGYPHILVNNAA 105 (256)
T ss_pred HHHHHHHHHcCCCcEEEECCC
Confidence 44433322 35899999887
No 453
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.24 E-value=0.087 Score=42.86 Aligned_cols=94 Identities=19% Similarity=0.138 Sum_probs=64.8
Q ss_pred ccCchhhhHHHHhhhhcCCC-CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchh
Q 042426 60 ILGMPGLTAYGGLHELCSPK-KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD 138 (270)
Q Consensus 60 ~l~~~~~ta~~~l~~~~~~~-~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 138 (270)
-+|+........|.. -++. .|.+++|.|.+.-+|.-++.++...|+.|++.-... . +
T Consensus 136 ~~PcTp~avi~lL~~-~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t--------------------~-~ 193 (285)
T PRK14191 136 FVPATPMGVMRLLKH-YHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT--------------------K-D 193 (285)
T ss_pred CCCCcHHHHHHHHHH-hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc--------------------H-H
Confidence 346555555555533 3343 589999999988999999999999999987753211 1 3
Q ss_pred HHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcc
Q 042426 139 LDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 139 ~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~ 181 (270)
+.+.+++ .|+++-++|.+.+- .-+.++++..++.+|.
T Consensus 194 l~~~~~~-----ADIvV~AvG~p~~i-~~~~vk~GavVIDvGi 230 (285)
T PRK14191 194 LSFYTQN-----ADIVCVGVGKPDLI-KASMVKKGAVVVDIGI 230 (285)
T ss_pred HHHHHHh-----CCEEEEecCCCCcC-CHHHcCCCcEEEEeec
Confidence 3333433 89999999986442 2456688989988886
No 454
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.23 E-value=0.046 Score=42.69 Aligned_cols=99 Identities=18% Similarity=0.145 Sum_probs=62.0
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCC
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEG 150 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~ 150 (270)
....++++++||-.| +|.|..+..+++.. .+|+.+..+++-.+.+++. .+... ++.... +..+.+. ..+.
T Consensus 72 ~~l~~~~~~~VLeiG--~GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~~~~--~~~~ 144 (212)
T PRK00312 72 ELLELKPGDRVLEIG--TGSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHN-VSVRHG-DGWKGWP--AYAP 144 (212)
T ss_pred HhcCCCCCCEEEEEC--CCccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCc-eEEEEC-CcccCCC--cCCC
Confidence 456788899999998 55566666666653 4899999888777666643 34432 222211 2211111 1136
Q ss_pred ccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426 151 IDIYFENVGG-KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 151 ~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 179 (270)
||+|+-.... .......+.|+++|+++..
T Consensus 145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 145 FDRILVTAAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred cCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence 9988765443 3556778899999998754
No 455
>PLN03075 nicotianamine synthase; Provisional
Probab=96.21 E-value=0.061 Score=44.00 Aligned_cols=97 Identities=9% Similarity=0.039 Sum_probs=67.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhC----CCceeecCCchhHHHHHHhHcCCCccE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKFG----FDDAFNYKEEPDLDAALNRCFPEGIDI 153 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~g----~~~vi~~~~~~~~~~~i~~~~~~~~d~ 153 (270)
+.++|+-+|. |+.++.++.+++.+ +.+++.++.+++..+.+++.+. ...-+.+... +..+.... .++||+
T Consensus 123 ~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~--l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTES--LKEYDV 198 (296)
T ss_pred CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhcccc--cCCcCE
Confidence 6789999984 88999888888654 4589999999998888874442 2233444333 33321111 136999
Q ss_pred EEeCC------Cc--chHHHHHHccccCCEEEEEc
Q 042426 154 YFENV------GG--KMLDAVLLNMRICGHIAVCG 180 (270)
Q Consensus 154 v~d~~------g~--~~~~~~~~~l~~~G~~v~~g 180 (270)
||-.+ .. ..++...+.|+|||.++.-.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 98875 12 27889999999999988654
No 456
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.19 E-value=0.012 Score=49.11 Aligned_cols=71 Identities=21% Similarity=0.217 Sum_probs=48.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
+++|+|++|.+|..+++.+...|.+|+++.+++++...+. ..+... ..|..+.+++.+.+. ++|.|+++++
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~l~~~~~-----~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDPASLRKAVA-----GCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCHHHHHHHHh-----CCCEEEEece
Confidence 5899999999999999999888999999998766544333 333331 224444312333332 3799999875
No 457
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=96.18 E-value=0.041 Score=43.94 Aligned_cols=81 Identities=25% Similarity=0.290 Sum_probs=51.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhC----CC---ceeecCC-chhHHHHHHhHc--
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK--VDLLKHKFG----FD---DAFNYKE-EPDLDAALNRCF-- 147 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~--~~~~~~~~g----~~---~vi~~~~-~~~~~~~i~~~~-- 147 (270)
.+.+++|+|+++++|.+++..+...|++|+++.+..+. .+.+.+... .. ...|..+ ..+....+.+..
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999888999998888876543 333331222 11 1135543 323332232222
Q ss_pred CCCccEEEeCCCc
Q 042426 148 PEGIDIYFENVGG 160 (270)
Q Consensus 148 ~~~~d~v~d~~g~ 160 (270)
-|+.|++++++|.
T Consensus 84 ~g~id~lvnnAg~ 96 (251)
T COG1028 84 FGRIDILVNNAGI 96 (251)
T ss_pred cCCCCEEEECCCC
Confidence 2368999999984
No 458
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.16 E-value=0.13 Score=42.53 Aligned_cols=93 Identities=9% Similarity=-0.002 Sum_probs=64.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVK-LVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~-~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
...+++|+|+ |..|.+.++.+. ..+. +|++..+++++.+.+.+++.... +..... +..+.+. ++|+|+.|
T Consensus 124 ~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~-~~~~~~-~~~~av~-----~aDiVita 195 (304)
T PRK07340 124 PPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALG-PTAEPL-DGEAIPE-----AVDLVVTA 195 (304)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC-CeeEEC-CHHHHhh-----cCCEEEEc
Confidence 4568999996 999999888876 4676 79999999888777665664311 111111 4544553 39999999
Q ss_pred CCcc--hHHHHHHccccCCEEEEEcccc
Q 042426 158 VGGK--MLDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 158 ~g~~--~~~~~~~~l~~~G~~v~~g~~~ 183 (270)
+.+. .+.. + ++|+-++..+|...
T Consensus 196 T~s~~Pl~~~-~--~~~g~hi~~iGs~~ 220 (304)
T PRK07340 196 TTSRTPVYPE-A--ARAGRLVVAVGAFT 220 (304)
T ss_pred cCCCCceeCc-c--CCCCCEEEecCCCC
Confidence 9863 4443 3 68888999998743
No 459
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=96.16 E-value=0.041 Score=38.27 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=60.8
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
|.+|+-.| .|.|..++.+++....+++++..++...+.+++.+ +.+.-++.... ++.+.......+.+|+|+-.
T Consensus 1 g~~vlD~~--~G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~D~Iv~n 77 (117)
T PF13659_consen 1 GDRVLDPG--CGSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG-DARDLPEPLPDGKFDLIVTN 77 (117)
T ss_dssp TEEEEEET--STTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES-HHHHHHHTCTTT-EEEEEE-
T ss_pred CCEEEEcC--cchHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC-chhhchhhccCceeEEEEEC
Confidence 46777776 55666666666665579999999999888777433 22211233333 55554433334489999864
Q ss_pred CCc---------------chHHHHHHccccCCEEEEE
Q 042426 158 VGG---------------KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 158 ~g~---------------~~~~~~~~~l~~~G~~v~~ 179 (270)
..- ..+..+.+.|+++|+++.+
T Consensus 78 pP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~ 114 (117)
T PF13659_consen 78 PPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI 114 (117)
T ss_dssp -STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 321 1367899999999998875
No 460
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.16 E-value=0.11 Score=39.39 Aligned_cols=96 Identities=21% Similarity=0.186 Sum_probs=54.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeecCC--chhHHHHHHhHc-----CC--Cc
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--DDAFNYKE--EPDLDAALNRCF-----PE--GI 151 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~~vi~~~~--~~~~~~~i~~~~-----~~--~~ 151 (270)
+|.|.|+ |.+|...+.++...|.+|...+.+++..+..++.... +....... .......+.... .. ++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~~a 79 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAVDA 79 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGCTE
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHhhh
Confidence 5889998 9999999999988899999999999887666533211 00111111 001112222111 11 69
Q ss_pred cEEEeCCCcc------hHHHHHHccccCCEEEEE
Q 042426 152 DIYFENVGGK------MLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 152 d~v~d~~g~~------~~~~~~~~l~~~G~~v~~ 179 (270)
|+|+|++... .+...-+.+.++-.+.+-
T Consensus 80 dlViEai~E~l~~K~~~~~~l~~~~~~~~ilasn 113 (180)
T PF02737_consen 80 DLVIEAIPEDLELKQELFAELDEICPPDTILASN 113 (180)
T ss_dssp SEEEE-S-SSHHHHHHHHHHHHCCS-TTSEEEE-
T ss_pred heehhhccccHHHHHHHHHHHHHHhCCCceEEec
Confidence 9999999863 344455555666666543
No 461
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.15 E-value=0.07 Score=39.52 Aligned_cols=81 Identities=21% Similarity=0.203 Sum_probs=56.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC------Cce----eecCCchhHHHHHHhHcCCCcc
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF------DDA----FNYKEEPDLDAALNRCFPEGID 152 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~------~~v----i~~~~~~~~~~~i~~~~~~~~d 152 (270)
+|.|.|+ |..|.+++..+...|.+|..-.++++..+.++ +-+. ... +... . ++.+.+++ .|
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~-~~~~n~~~~~~~~l~~~i~~t-~-dl~~a~~~-----ad 71 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEIN-ETRQNPKYLPGIKLPENIKAT-T-DLEEALED-----AD 71 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHH-HHTSETTTSTTSBEETTEEEE-S-SHHHHHTT------S
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhCCCCCCCCCcccCcccccc-c-CHHHHhCc-----cc
Confidence 5889998 99999999999999999999999998888887 3222 111 1111 1 56665543 89
Q ss_pred EEEeCCCcchHHHHHHcccc
Q 042426 153 IYFENVGGKMLDAVLLNMRI 172 (270)
Q Consensus 153 ~v~d~~g~~~~~~~~~~l~~ 172 (270)
+++=++....++..++.+++
T Consensus 72 ~IiiavPs~~~~~~~~~l~~ 91 (157)
T PF01210_consen 72 IIIIAVPSQAHREVLEQLAP 91 (157)
T ss_dssp EEEE-S-GGGHHHHHHHHTT
T ss_pred EEEecccHHHHHHHHHHHhh
Confidence 99999988766666665555
No 462
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=96.15 E-value=0.24 Score=37.76 Aligned_cols=98 Identities=14% Similarity=0.233 Sum_probs=63.7
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCC
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPE 149 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~ 149 (270)
....+.++++||=.| +|.|..++.+++.. +.+|+++..+++..+.+++ +.+... +..... +.... ..+
T Consensus 25 ~~l~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~-i~~~~~-d~~~~----~~~ 96 (187)
T PRK08287 25 SKLELHRAKHLIDVG--AGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGN-IDIIPG-EAPIE----LPG 96 (187)
T ss_pred HhcCCCCCCEEEEEC--CcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCC-eEEEec-Cchhh----cCc
Confidence 344567888999888 56678888888765 4699999999887777653 234332 112111 22111 123
Q ss_pred CccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426 150 GIDIYFENVGG----KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 150 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~ 179 (270)
.+|+|+..... ..+..+.+.|+++|+++..
T Consensus 97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 69999864321 2667888999999998764
No 463
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.14 E-value=0.08 Score=44.39 Aligned_cols=90 Identities=26% Similarity=0.163 Sum_probs=64.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC------ce----eecCCchhHHHHHHhHcCCCcc
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD------DA----FNYKEEPDLDAALNRCFPEGID 152 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~------~v----i~~~~~~~~~~~i~~~~~~~~d 152 (270)
+|.|+|+ |.+|.+.+..+...|.+|++..+++++.+.+. +.+.. .. +... . +..+.+. ..|
T Consensus 6 ~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~-~~~~~~~~~~g~~~~~~~~~~-~-~~~e~~~-----~aD 76 (328)
T PRK14618 6 RVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALA-AERENREYLPGVALPAELYPT-A-DPEEALA-----GAD 76 (328)
T ss_pred eEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HhCcccccCCCCcCCCCeEEe-C-CHHHHHc-----CCC
Confidence 6999997 99999999998888999999999888877776 33211 00 1111 1 3333332 389
Q ss_pred EEEeCCCcchHHHHHHccccCCEEEEEcc
Q 042426 153 IYFENVGGKMLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 153 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~ 181 (270)
+|+-|+....+...++.++++-.++.+..
T Consensus 77 ~Vi~~v~~~~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 77 FAVVAVPSKALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred EEEEECchHHHHHHHHhcCcCCEEEEEee
Confidence 99999998877888888888777776544
No 464
>PRK08317 hypothetical protein; Provisional
Probab=96.12 E-value=0.046 Score=43.27 Aligned_cols=102 Identities=23% Similarity=0.284 Sum_probs=66.5
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh-CCCceeecCCchhHHHHHHhHcCCC
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKF-GFDDAFNYKEEPDLDAALNRCFPEG 150 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~i~~~~~~~ 150 (270)
+...+.++++||-.|. |.|..+..+++..+ .++++++.+++..+.+++.. .....+..... +... . ....+.
T Consensus 13 ~~~~~~~~~~vLdiG~--G~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~ 87 (241)
T PRK08317 13 ELLAVQPGDRVLDVGC--GPGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADG-L-PFPDGS 87 (241)
T ss_pred HHcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-cccc-C-CCCCCC
Confidence 4567888999999985 45888889988773 59999999998888887331 11111212111 1111 0 011236
Q ss_pred ccEEEeCCC-----c--chHHHHHHccccCCEEEEEc
Q 042426 151 IDIYFENVG-----G--KMLDAVLLNMRICGHIAVCG 180 (270)
Q Consensus 151 ~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g 180 (270)
||+|+.... . ..+....++|+++|.++...
T Consensus 88 ~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 88 FDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred ceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 888875432 2 37788999999999998764
No 465
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.11 E-value=0.04 Score=45.46 Aligned_cols=74 Identities=27% Similarity=0.415 Sum_probs=53.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHhC-CC---ce--eecCCchhHHHHHHhHcCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV---DLLKHKFG-FD---DA--FNYKEEPDLDAALNRCFPEG 150 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~---~~~~~~~g-~~---~v--i~~~~~~~~~~~i~~~~~~~ 150 (270)
.+..|.|+||+|=+|.+.+..+-..|++|.+++|++++. +.++ ++. +. .+ -|-.++..|.+.+. |
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAID-----G 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHHh-----C
Confidence 567899999999999999999999999999999998864 3455 443 22 11 13333325555553 4
Q ss_pred ccEEEeCCC
Q 042426 151 IDIYFENVG 159 (270)
Q Consensus 151 ~d~v~d~~g 159 (270)
+|.||-++.
T Consensus 79 cdgVfH~As 87 (327)
T KOG1502|consen 79 CDGVFHTAS 87 (327)
T ss_pred CCEEEEeCc
Confidence 899988765
No 466
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=96.08 E-value=0.033 Score=42.90 Aligned_cols=96 Identities=11% Similarity=0.055 Sum_probs=59.8
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426 77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGIDI 153 (270)
Q Consensus 77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~ 153 (270)
...++.+||-.| +|.|..++.+++ .|.+|++++.++.-.+.+++. .+.. +..... ++.. . . .++.+|+
T Consensus 27 ~~~~~~~vLDiG--cG~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~-~-~-~~~~fD~ 97 (195)
T TIGR00477 27 KTVAPCKTLDLG--CGQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA-A-A-LNEDYDF 97 (195)
T ss_pred ccCCCCcEEEeC--CCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh-c-c-ccCCCCE
Confidence 344556899888 677888888887 488999999998877666522 2322 111111 1111 0 0 1235999
Q ss_pred EEeCCC-----c----chHHHHHHccccCCEEEEEcc
Q 042426 154 YFENVG-----G----KMLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 154 v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 181 (270)
|+.+.- . ..+..+.+.|+|+|.++.+..
T Consensus 98 I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~ 134 (195)
T TIGR00477 98 IFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA 134 (195)
T ss_pred EEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 876422 1 266788889999999665544
No 467
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.08 E-value=0.041 Score=40.87 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=39.5
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK 122 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~ 122 (270)
.|..|+++|+.-|+|...++-+...|++|+++.|.++++..+.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV 48 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV 48 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH
Confidence 4678999999899999999999999999999999999988777
No 468
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=96.07 E-value=0.061 Score=40.85 Aligned_cols=76 Identities=18% Similarity=0.225 Sum_probs=43.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH-------HHHHHHHHHhCCCc---eeecCCchhHHHHHHhHcC--C
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK-------EKVDLLKHKFGFDD---AFNYKEEPDLDAALNRCFP--E 149 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~-------~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~ 149 (270)
++||+|+.|++|+..++.+...+. +++++.++. +..+.++ +.|... -.|..+..++.+.+.+... +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 589999999999999988877766 999999882 1234444 445531 1244444234444443322 2
Q ss_pred CccEEEeCCC
Q 042426 150 GIDIYFENVG 159 (270)
Q Consensus 150 ~~d~v~d~~g 159 (270)
.++-||.+.|
T Consensus 81 ~i~gVih~ag 90 (181)
T PF08659_consen 81 PIDGVIHAAG 90 (181)
T ss_dssp -EEEEEE---
T ss_pred Ccceeeeeee
Confidence 5677777766
No 469
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=96.03 E-value=0.21 Score=41.77 Aligned_cols=88 Identities=17% Similarity=0.160 Sum_probs=61.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVK-LVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV 158 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~-~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~ 158 (270)
.|.++.|+|. |.+|...+++++ .+|.+|+...+.... +... .++.. + . ++.+.+.+ .|+|.-+.
T Consensus 144 ~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~~~-~~~~-~~~~~----~--~-~l~ell~~-----sDvv~lh~ 208 (323)
T PRK15409 144 HHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRHHK-EAEE-RFNAR----Y--C-DLDTLLQE-----SDFVCIIL 208 (323)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCCch-hhHH-hcCcE----e--c-CHHHHHHh-----CCEEEEeC
Confidence 4679999997 999999999998 899999987765322 1112 34432 1 1 45555544 78988877
Q ss_pred Cc-c-----hHHHHHHccccCCEEEEEccc
Q 042426 159 GG-K-----MLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 159 g~-~-----~~~~~~~~l~~~G~~v~~g~~ 182 (270)
.. + .-...++.|+++..++.++..
T Consensus 209 plt~~T~~li~~~~l~~mk~ga~lIN~aRG 238 (323)
T PRK15409 209 PLTDETHHLFGAEQFAKMKSSAIFINAGRG 238 (323)
T ss_pred CCChHHhhccCHHHHhcCCCCeEEEECCCc
Confidence 63 2 235688899999999998773
No 470
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.00 E-value=0.16 Score=42.24 Aligned_cols=85 Identities=19% Similarity=0.153 Sum_probs=61.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.|.++.|+|- |.+|..++++++.+|.+|++..++... . ..+. .+ . ++.+.+.+ .|+|.-++.
T Consensus 144 ~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~----~-~~~~----~~--~-~l~ell~~-----sDvv~lh~P 205 (311)
T PRK08410 144 KGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKN----K-NEEY----ER--V-SLEELLKT-----SDIISIHAP 205 (311)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccc----c-ccCc----ee--e-cHHHHhhc-----CCEEEEeCC
Confidence 4789999997 999999999999999999999865321 0 1111 11 1 45555544 788887765
Q ss_pred c-c-----hHHHHHHccccCCEEEEEccc
Q 042426 160 G-K-----MLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 160 ~-~-----~~~~~~~~l~~~G~~v~~g~~ 182 (270)
. + .-...+..|+++..+|.++..
T Consensus 206 lt~~T~~li~~~~~~~Mk~~a~lIN~aRG 234 (311)
T PRK08410 206 LNEKTKNLIAYKELKLLKDGAILINVGRG 234 (311)
T ss_pred CCchhhcccCHHHHHhCCCCeEEEECCCc
Confidence 2 2 336788999999999998773
No 471
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.99 E-value=0.13 Score=43.14 Aligned_cols=90 Identities=22% Similarity=0.233 Sum_probs=61.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHh----CCCceeecCCchhHHHHHHhHcCCCccE
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVK-LVGC-YVVGSARSKEKVDLLKHKF----GFDDAFNYKEEPDLDAALNRCFPEGIDI 153 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~-~~g~-~v~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~~~~~d~ 153 (270)
...+++|+|+ |+.|.+.+..+. ..++ +|++..++.++.+.+.+++ |.. +.... +..+.+. ..|+
T Consensus 128 ~~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~---~~~~av~-----~aDi 197 (326)
T TIGR02992 128 DSSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAAT---DPRAAMS-----GADI 197 (326)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeC---CHHHHhc-----cCCE
Confidence 4568999997 999988877765 5776 7999999998877665454 332 22121 4444443 3899
Q ss_pred EEeCCCcc--hHHHHHHccccCCEEEEEcc
Q 042426 154 YFENVGGK--MLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 154 v~d~~g~~--~~~~~~~~l~~~G~~v~~g~ 181 (270)
|+.|++.. .+.. +.++++-.+..+|.
T Consensus 198 VvtaT~s~~p~i~~--~~l~~g~~i~~vg~ 225 (326)
T TIGR02992 198 IVTTTPSETPILHA--EWLEPGQHVTAMGS 225 (326)
T ss_pred EEEecCCCCcEecH--HHcCCCcEEEeeCC
Confidence 99999863 3332 34788777777776
No 472
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.97 E-value=0.13 Score=41.39 Aligned_cols=96 Identities=15% Similarity=0.147 Sum_probs=65.2
Q ss_pred hcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426 75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDI 153 (270)
Q Consensus 75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~ 153 (270)
...+.++++||=+| +|.|..+..+++.. +.+|++++.++.-.+.+++.+.-...+. . +.... ...+.+|+
T Consensus 26 ~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~---~-d~~~~---~~~~~fD~ 96 (258)
T PRK01683 26 RVPLENPRYVVDLG--CGPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE---A-DIASW---QPPQALDL 96 (258)
T ss_pred hCCCcCCCEEEEEc--ccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE---C-chhcc---CCCCCccE
Confidence 34567789999998 66788888888776 5699999999988888874432111211 1 22111 11126999
Q ss_pred EEeCCCc-------chHHHHHHccccCCEEEEE
Q 042426 154 YFENVGG-------KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 154 v~d~~g~-------~~~~~~~~~l~~~G~~v~~ 179 (270)
|+....- ..+..+.+.|+++|.++..
T Consensus 97 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 97 IFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred EEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 9865441 2678889999999998875
No 473
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.95 E-value=0.038 Score=46.02 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=32.6
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK 117 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~ 117 (270)
+.+|||+||+|-+|..++..+...|.+|++++++..+
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 5689999999999999999998899999998876543
No 474
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.95 E-value=0.18 Score=34.98 Aligned_cols=91 Identities=19% Similarity=0.171 Sum_probs=60.7
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc--
Q 042426 84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-- 161 (270)
Q Consensus 84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-- 161 (270)
|+|.|. |.+|..+++.++..+.+|+++..+++..+.++ +.|.. ++. .+. .-.+.+++..-..++.++-+++..
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~~-~i~-gd~-~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGVE-VIY-GDA-TDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTSE-EEE-S-T-TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hcccc-ccc-ccc-hhhhHHhhcCccccCEEEEccCCHHH
Confidence 578887 99999999999997779999999999999998 66754 332 222 122334443333688888888764
Q ss_pred --hHHHHHHccccCCEEEEE
Q 042426 162 --MLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 162 --~~~~~~~~l~~~G~~v~~ 179 (270)
.....++.+.+..+++..
T Consensus 76 n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 233444555566676654
No 475
>PLN02650 dihydroflavonol-4-reductase
Probab=95.94 E-value=0.053 Score=45.83 Aligned_cols=41 Identities=27% Similarity=0.269 Sum_probs=34.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~ 121 (270)
..+|||+||+|-+|..++..+...|.+|++++++.++.+.+
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKV 45 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHH
Confidence 45899999999999999999988999999998876555443
No 476
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.93 E-value=0.12 Score=38.58 Aligned_cols=86 Identities=21% Similarity=0.201 Sum_probs=57.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-c
Q 042426 83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-K 161 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~ 161 (270)
+|.++|. |.+|...++-+...|.+|++..+++++.+.+. +.|+. ..+ +..+.+.+ .|+||-|+.. .
T Consensus 3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~-~~~-----s~~e~~~~-----~dvvi~~v~~~~ 69 (163)
T PF03446_consen 3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAE-VAD-----SPAEAAEQ-----ADVVILCVPDDD 69 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEE-EES-----SHHHHHHH-----BSEEEE-SSSHH
T ss_pred EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhh-hhh-----hhhhHhhc-----ccceEeecccch
Confidence 6889997 99999999998889999999999999998888 55642 221 34444444 6888888876 3
Q ss_pred hHHHH------HHccccCCEEEEEcc
Q 042426 162 MLDAV------LLNMRICGHIAVCGM 181 (270)
Q Consensus 162 ~~~~~------~~~l~~~G~~v~~g~ 181 (270)
..... +..+.++..++.++.
T Consensus 70 ~v~~v~~~~~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 70 AVEAVLFGENILAGLRPGKIIIDMST 95 (163)
T ss_dssp HHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred hhhhhhhhhHHhhccccceEEEecCC
Confidence 33333 334455556666544
No 477
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.93 E-value=0.11 Score=40.82 Aligned_cols=100 Identities=13% Similarity=0.102 Sum_probs=56.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH-------------------HHHHHHHHHh---CC-CceeecCCc
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK-------------------EKVDLLKHKF---GF-DDAFNYKEE 136 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~-------------------~~~~~~~~~~---g~-~~vi~~~~~ 136 (270)
.++|+|.|. ||+|.+++..+..-|+ ++..++.++ .+.+.+++.. .. .++--..+.
T Consensus 30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 368999997 9999999999988898 776666332 1222222111 11 111111111
Q ss_pred hhHHHHHHhHcCCCccEEEeCCCcc--hHHHHHHccccCCEEEEEccc
Q 042426 137 PDLDAALNRCFPEGIDIYFENVGGK--MLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 137 ~~~~~~i~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~ 182 (270)
-..+.+.+...++||+|+||..+- -......|.+.+=.+++.+..
T Consensus 109 -~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Ga 155 (263)
T COG1179 109 -ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGA 155 (263)
T ss_pred -hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccc
Confidence 122344444555899999999873 333344444555566665543
No 478
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.92 E-value=0.15 Score=41.50 Aligned_cols=94 Identities=18% Similarity=0.125 Sum_probs=66.3
Q ss_pred ccCchhhhHHHHhhhhcCC-CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchh
Q 042426 60 ILGMPGLTAYGGLHELCSP-KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD 138 (270)
Q Consensus 60 ~l~~~~~ta~~~l~~~~~~-~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 138 (270)
-.|+.....+..+.. .++ -.|.+++|.|.+.-+|.-++.++...|+.|++.-+. +. +
T Consensus 138 ~~PcTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~--------------------T~-~ 195 (285)
T PRK10792 138 LRPCTPRGIMTLLER-YGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF--------------------TK-N 195 (285)
T ss_pred CCCCCHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC--------------------CC-C
Confidence 346655555555533 333 358999999997889999999999999988777532 11 3
Q ss_pred HHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcc
Q 042426 139 LDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 139 ~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~ 181 (270)
+.+.+++ .|+++.++|.+.+-. -+.++++..++.+|.
T Consensus 196 l~~~~~~-----ADIvi~avG~p~~v~-~~~vk~gavVIDvGi 232 (285)
T PRK10792 196 LRHHVRN-----ADLLVVAVGKPGFIP-GEWIKPGAIVIDVGI 232 (285)
T ss_pred HHHHHhh-----CCEEEEcCCCccccc-HHHcCCCcEEEEccc
Confidence 3334443 899999999865422 378899999999885
No 479
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.91 E-value=0.18 Score=42.05 Aligned_cols=86 Identities=21% Similarity=0.206 Sum_probs=59.6
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
|.++.|+|. |.+|..+++.++.+|.+|++.++ ....... ..+. .-. . ++.+.+.+ .|++.-.+.
T Consensus 142 gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~---~~~~---~~~--~-~Ld~lL~~-----sDiv~lh~P 206 (324)
T COG0111 142 GKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAG---VDGV---VGV--D-SLDELLAE-----ADILTLHLP 206 (324)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhc---cccc---eec--c-cHHHHHhh-----CCEEEEcCC
Confidence 679999997 99999999999999999999997 3322221 1121 101 1 45555554 788877665
Q ss_pred c-c-----hHHHHHHccccCCEEEEEcc
Q 042426 160 G-K-----MLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 160 ~-~-----~~~~~~~~l~~~G~~v~~g~ 181 (270)
- + .-...+..|+++..++.++.
T Consensus 207 lT~eT~g~i~~~~~a~MK~gailIN~aR 234 (324)
T COG0111 207 LTPETRGLINAEELAKMKPGAILINAAR 234 (324)
T ss_pred CCcchhcccCHHHHhhCCCCeEEEECCC
Confidence 2 1 23567788888888888766
No 480
>PRK14967 putative methyltransferase; Provisional
Probab=95.89 E-value=0.14 Score=40.27 Aligned_cols=95 Identities=18% Similarity=0.117 Sum_probs=61.8
Q ss_pred cCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426 76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGI 151 (270)
Q Consensus 76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~ 151 (270)
..++++++||-.|. |.|..++.+++. +. +|+++..++...+.+++ ..+....+ ... ++.+.+ ..+.|
T Consensus 32 ~~~~~~~~vLDlGc--G~G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~--~~~-d~~~~~---~~~~f 102 (223)
T PRK14967 32 EGLGPGRRVLDLCT--GSGALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDV--RRG-DWARAV---EFRPF 102 (223)
T ss_pred cccCCCCeEEEecC--CHHHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEE--EEC-chhhhc---cCCCe
Confidence 45778899999984 448888888875 55 99999999887776652 23332111 112 333322 12369
Q ss_pred cEEEeCCCc----------------------------chHHHHHHccccCCEEEEE
Q 042426 152 DIYFENVGG----------------------------KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 152 d~v~d~~g~----------------------------~~~~~~~~~l~~~G~~v~~ 179 (270)
|+|+..... ..+..+.+.|+++|+++.+
T Consensus 103 D~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 103 DVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred eEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999875320 1345678899999999875
No 481
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=95.88 E-value=0.7 Score=37.03 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=60.6
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN 157 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~ 157 (270)
..++.+||-.|+ |.|..+..+++ .|.++++++.+++..+.+++.......+.. +... + ....+.||+|+..
T Consensus 40 ~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~----d~~~-~-~~~~~~fD~V~s~ 110 (251)
T PRK10258 40 QRKFTHVLDAGC--GPGWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAG----DIES-L-PLATATFDLAWSN 110 (251)
T ss_pred ccCCCeEEEeeC--CCCHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEc----Cccc-C-cCCCCcEEEEEEC
Confidence 345678999984 34665555554 588999999999988888733322222211 1111 0 0112269999875
Q ss_pred CCc-------chHHHHHHccccCCEEEEEcc
Q 042426 158 VGG-------KMLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 158 ~g~-------~~~~~~~~~l~~~G~~v~~g~ 181 (270)
..- ..+..+.+.|+|+|.++....
T Consensus 111 ~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 111 LAVQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred chhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 431 267888899999999987644
No 482
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.86 E-value=0.85 Score=38.09 Aligned_cols=85 Identities=12% Similarity=0.112 Sum_probs=54.8
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----------hCCC-----ceeecCCchhHHHHHHhH
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK----------FGFD-----DAFNYKEEPDLDAALNRC 146 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~----------~g~~-----~vi~~~~~~~~~~~i~~~ 146 (270)
.+|.|+|+ |.+|...++.+...|.+|++.+.+++..+.+++. .+.. .-+.... ++.+.+
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~--~l~~av--- 81 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVA--TIEACV--- 81 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecC--CHHHHh---
Confidence 47999997 9999999999888999999999988766554321 1110 0011111 222222
Q ss_pred cCCCccEEEeCCCcc------hHHHHHHccccCC
Q 042426 147 FPEGIDIYFENVGGK------MLDAVLLNMRICG 174 (270)
Q Consensus 147 ~~~~~d~v~d~~g~~------~~~~~~~~l~~~G 174 (270)
.++|+|++|+... .+...-+.++++.
T Consensus 82 --~~aDlViEavpE~l~vK~~lf~~l~~~~~~~a 113 (321)
T PRK07066 82 --ADADFIQESAPEREALKLELHERISRAAKPDA 113 (321)
T ss_pred --cCCCEEEECCcCCHHHHHHHHHHHHHhCCCCe
Confidence 2489999999853 3445555666665
No 483
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.83 E-value=0.027 Score=47.40 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=32.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK 115 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~ 115 (270)
++.+|||+||+|.+|..+++.+...|.+|++++++.
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~ 40 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRS 40 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence 357899999999999999999999999999998754
No 484
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.82 E-value=0.19 Score=41.50 Aligned_cols=34 Identities=9% Similarity=0.220 Sum_probs=30.2
Q ss_pred CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeC
Q 042426 80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSAR 113 (270)
Q Consensus 80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~ 113 (270)
.|.+++|+|++ +|+|.+.++.+...|++|++.++
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~ 42 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW 42 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence 47899999995 89999999999999999999653
No 485
>PRK00536 speE spermidine synthase; Provisional
Probab=95.80 E-value=0.046 Score=43.97 Aligned_cols=96 Identities=15% Similarity=0.015 Sum_probs=61.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CceeecCCchhHHHHHHhHcCCCccEEE-eC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF-DDAFNYKEEPDLDAALNRCFPEGIDIYF-EN 157 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~~~~d~v~-d~ 157 (270)
+..+|||+| ||=|.++-.++|+-. +|..+.-+++-.+..++-+.. ...++.... .+...+.+...+.||+|+ |+
T Consensus 72 ~pk~VLIiG--GGDGg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv-~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 72 ELKEVLIVD--GFDLELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKNF-THAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCeEEEEc--CCchHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCE-EEeehhhhccCCcCCEEEEcC
Confidence 347899999 566777788888864 999999888888888832332 111221111 111123333334698875 54
Q ss_pred CCc-chHHHHHHccccCCEEEEE
Q 042426 158 VGG-KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 158 ~g~-~~~~~~~~~l~~~G~~v~~ 179 (270)
.-. ...+.+.++|+++|.++.=
T Consensus 148 ~~~~~fy~~~~~~L~~~Gi~v~Q 170 (262)
T PRK00536 148 EPDIHKIDGLKRMLKEDGVFISV 170 (262)
T ss_pred CCChHHHHHHHHhcCCCcEEEEC
Confidence 443 4778899999999998863
No 486
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.79 E-value=0.057 Score=45.64 Aligned_cols=48 Identities=17% Similarity=0.160 Sum_probs=38.7
Q ss_pred hHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426 67 TAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK 115 (270)
Q Consensus 67 ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~ 115 (270)
|||.-++....++ ..+|+|+||+|=+|..++..+...|.+|+++++..
T Consensus 2 ~~~~~~~~~~~~~-~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~ 49 (348)
T PRK15181 2 TAYEELRTKLVLA-PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFS 49 (348)
T ss_pred chhhhhhhccccc-CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5676665444443 47899999999999999999998899999998754
No 487
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.78 E-value=0.2 Score=36.93 Aligned_cols=87 Identities=16% Similarity=0.249 Sum_probs=59.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV 158 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~ 158 (270)
.+.+|.|+|- |+-|.+.++-++..|.+|++..+... ..+.++ +-|.. +. ++.+.+.+ .|+|+-.+
T Consensus 3 ~~k~IAViGy-GsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~-~~Gf~-v~------~~~eAv~~-----aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGY-GSQGHAHALNLRDSGVNVIVGLREGSASWEKAK-ADGFE-VM------SVAEAVKK-----ADVVMLLL 68 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHH-HTT-E-CC------EHHHHHHC------SEEEE-S
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHH-HCCCe-ec------cHHHHHhh-----CCEEEEeC
Confidence 4678999998 99999999999999999999998766 677777 88874 32 45556655 89999888
Q ss_pred Ccc----hH-HHHHHccccCCEEEEEc
Q 042426 159 GGK----ML-DAVLLNMRICGHIAVCG 180 (270)
Q Consensus 159 g~~----~~-~~~~~~l~~~G~~v~~g 180 (270)
... .+ +.....|+++-.++...
T Consensus 69 PD~~q~~vy~~~I~p~l~~G~~L~fah 95 (165)
T PF07991_consen 69 PDEVQPEVYEEEIAPNLKPGATLVFAH 95 (165)
T ss_dssp -HHHHHHHHHHHHHHHS-TT-EEEESS
T ss_pred ChHHHHHHHHHHHHhhCCCCCEEEeCC
Confidence 764 33 45556888888777643
No 488
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=95.78 E-value=0.051 Score=39.92 Aligned_cols=98 Identities=21% Similarity=0.369 Sum_probs=65.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGIDI 153 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~ 153 (270)
+++.+||=.| +|.|.....+++.+ +.++++++.+++-.+.+++ +.+.+++ ..... ++.+ +.+...+.||+
T Consensus 2 ~~~~~iLDlG--cG~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni-~~~~~-d~~~-l~~~~~~~~D~ 76 (152)
T PF13847_consen 2 KSNKKILDLG--CGTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGLDNI-EFIQG-DIED-LPQELEEKFDI 76 (152)
T ss_dssp TTTSEEEEET---TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTSTTE-EEEES-BTTC-GCGCSSTTEEE
T ss_pred CCCCEEEEec--CcCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhccccccccccc-ceEEe-ehhc-cccccCCCeeE
Confidence 4567888887 77888888888543 6799999999998888874 3555522 11111 2222 22111146999
Q ss_pred EEeCCC-----c--chHHHHHHccccCCEEEEEcc
Q 042426 154 YFENVG-----G--KMLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 154 v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 181 (270)
|+.... . ..++.+.+.++++|.++....
T Consensus 77 I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~ 111 (152)
T PF13847_consen 77 IISNGVLHHFPDPEKVLKNIIRLLKPGGILIISDP 111 (152)
T ss_dssp EEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEEC
Confidence 998643 1 267889999999999887644
No 489
>PLN02214 cinnamoyl-CoA reductase
Probab=95.76 E-value=0.082 Score=44.60 Aligned_cols=75 Identities=23% Similarity=0.338 Sum_probs=49.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH--HHHHHh-CC-C--ce--eecCCchhHHHHHHhHcCCCc
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD--LLKHKF-GF-D--DA--FNYKEEPDLDAALNRCFPEGI 151 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~--~~~~~~-g~-~--~v--i~~~~~~~~~~~i~~~~~~~~ 151 (270)
++.+|+|+||+|-+|..++..+...|.+|++++++.++.. .+. .+ +. . .. .|..+..++.+.+. ++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~ 82 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLR-ELEGGKERLILCKADLQDYEALKAAID-----GC 82 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHH-HhhCCCCcEEEEecCcCChHHHHHHHh-----cC
Confidence 4678999999999999999999888999999998765422 122 22 11 1 11 23333312333332 48
Q ss_pred cEEEeCCCc
Q 042426 152 DIYFENVGG 160 (270)
Q Consensus 152 d~v~d~~g~ 160 (270)
|+||.+++.
T Consensus 83 d~Vih~A~~ 91 (342)
T PLN02214 83 DGVFHTASP 91 (342)
T ss_pred CEEEEecCC
Confidence 999999873
No 490
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.76 E-value=0.068 Score=43.24 Aligned_cols=101 Identities=17% Similarity=0.191 Sum_probs=65.6
Q ss_pred hcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhC------CCceeecCCchhHHHHHHhH
Q 042426 75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKFG------FDDAFNYKEEPDLDAALNRC 146 (270)
Q Consensus 75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~g------~~~vi~~~~~~~~~~~i~~~ 146 (270)
...++++++||-.| +|.|..+..+++..+ .+|++++.+++-.+.++++.. ... +..... +..+ + ..
T Consensus 68 ~~~~~~~~~VLDlG--cGtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~-i~~~~~-d~~~-l-p~ 141 (261)
T PLN02233 68 WSGAKMGDRVLDLC--CGSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKN-IEWIEG-DATD-L-PF 141 (261)
T ss_pred HhCCCCCCEEEEEC--CcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCC-eEEEEc-cccc-C-CC
Confidence 34677899999998 566777778887765 599999999998887764332 111 111111 1110 0 01
Q ss_pred cCCCccEEEeCCC-----c--chHHHHHHccccCCEEEEEcc
Q 042426 147 FPEGIDIYFENVG-----G--KMLDAVLLNMRICGHIAVCGM 181 (270)
Q Consensus 147 ~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 181 (270)
.++.||.|+-..+ . ..+.++.+.|+|+|+++.+..
T Consensus 142 ~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~ 183 (261)
T PLN02233 142 DDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDF 183 (261)
T ss_pred CCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence 1125899876443 1 268899999999999988755
No 491
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=95.76 E-value=0.018 Score=38.18 Aligned_cols=82 Identities=18% Similarity=0.237 Sum_probs=53.1
Q ss_pred chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeecCCchhHHHHHHhHcCCCccEEEeCCCc-------c
Q 042426 91 GAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD--AFNYKEEPDLDAALNRCFPEGIDIYFENVGG-------K 161 (270)
Q Consensus 91 g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-------~ 161 (270)
+|.|..+..+++.-+.++++++.+++..+.+++...... ....+.. ++ ...++.||.|+....- .
T Consensus 5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~ 78 (95)
T PF08241_consen 5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA 78 (95)
T ss_dssp -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence 568888888888867799999999999999884443322 1111111 11 1112258999875542 2
Q ss_pred hHHHHHHccccCCEEEE
Q 042426 162 MLDAVLLNMRICGHIAV 178 (270)
Q Consensus 162 ~~~~~~~~l~~~G~~v~ 178 (270)
.++++.+.|+|+|+++.
T Consensus 79 ~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 79 ALREIYRVLKPGGRLVI 95 (95)
T ss_dssp HHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHcCcCeEEeC
Confidence 67899999999999863
No 492
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.75 E-value=0.13 Score=36.36 Aligned_cols=91 Identities=21% Similarity=0.203 Sum_probs=51.1
Q ss_pred EEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHH----HHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEE
Q 042426 83 YVYVSAASGAVGQLVGQFVKL-VGCYVVGSARSKE----KVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYF 155 (270)
Q Consensus 83 ~vlI~ga~g~vG~~ai~la~~-~g~~v~~~~~~~~----~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~ 155 (270)
+|.|+|++|-+|.++++.+.. -+.++.....+.. ..+.-. -.|.. .+.-+ . ++.+.+.+ +|+++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~-~~~~~~~~~~v~--~-~l~~~~~~-----~DVvI 72 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGE-LAGIGPLGVPVT--D-DLEELLEE-----ADVVI 72 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHH-HCTSST-SSBEB--S--HHHHTTH------SEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhh-hhCcCCcccccc--h-hHHHhccc-----CCEEE
Confidence 689999999999999999987 6778766664432 001110 11211 11111 1 44444433 89999
Q ss_pred eCCCcchHHHHHHccccCCEEEEEccc
Q 042426 156 ENVGGKMLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 156 d~~g~~~~~~~~~~l~~~G~~v~~g~~ 182 (270)
|++..+.....++.+...|.-+.+|.+
T Consensus 73 DfT~p~~~~~~~~~~~~~g~~~ViGTT 99 (124)
T PF01113_consen 73 DFTNPDAVYDNLEYALKHGVPLVIGTT 99 (124)
T ss_dssp EES-HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred EcCChHHhHHHHHHHHhCCCCEEEECC
Confidence 999666665566655555655555543
No 493
>PRK14968 putative methyltransferase; Provisional
Probab=95.75 E-value=0.069 Score=40.61 Aligned_cols=44 Identities=27% Similarity=0.198 Sum_probs=34.6
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 042426 78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124 (270)
Q Consensus 78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~ 124 (270)
..++.++|..| +|.|..+..+++. +.+++++..+++-.+.+++.
T Consensus 21 ~~~~~~vLd~G--~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~ 64 (188)
T PRK14968 21 DKKGDRVLEVG--TGSGIVAIVAAKN-GKKVVGVDINPYAVECAKCN 64 (188)
T ss_pred ccCCCEEEEEc--cccCHHHHHHHhh-cceEEEEECCHHHHHHHHHH
Confidence 36778899998 6667777788777 88999999998877776533
No 494
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.74 E-value=0.11 Score=39.42 Aligned_cols=92 Identities=13% Similarity=0.156 Sum_probs=59.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426 81 GEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE 156 (270)
Q Consensus 81 g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d 156 (270)
++++|-.| +|.|..++.+++.. +.+|++++.+++..+.+++ +.+.++ +..... +..+ +. ..+.||+|+-
T Consensus 43 ~~~vLDiG--cGtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~-i~~i~~-d~~~-~~--~~~~fD~I~s 115 (181)
T TIGR00138 43 GKKVIDIG--SGAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNN-VEIVNG-RAED-FQ--HEEQFDVITS 115 (181)
T ss_pred CCeEEEec--CCCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCC-eEEEec-chhh-cc--ccCCccEEEe
Confidence 78899988 56667777777655 4599999999876655542 345443 222222 3322 11 1236999886
Q ss_pred CCCc---chHHHHHHccccCCEEEEE
Q 042426 157 NVGG---KMLDAVLLNMRICGHIAVC 179 (270)
Q Consensus 157 ~~g~---~~~~~~~~~l~~~G~~v~~ 179 (270)
..-. ..++.+.+.|+++|+++..
T Consensus 116 ~~~~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 116 RALASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred hhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence 5422 2567778899999999875
No 495
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=95.74 E-value=0.033 Score=39.56 Aligned_cols=80 Identities=21% Similarity=0.247 Sum_probs=50.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 160 (270)
-+|-|+|+ |.+|..+...++..|..|..+. ++.++.+.+.+.++...+.+..+ .+ ...|++|=++..
T Consensus 11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------~~-----~~aDlv~iavpD 78 (127)
T PF10727_consen 11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE------IL-----RDADLVFIAVPD 78 (127)
T ss_dssp -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG------GG-----CC-SEEEE-S-C
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc------cc-----ccCCEEEEEech
Confidence 47999998 9999999999999999988875 45556676664455433332211 11 138999999998
Q ss_pred chHHHHHHccccC
Q 042426 161 KMLDAVLLNMRIC 173 (270)
Q Consensus 161 ~~~~~~~~~l~~~ 173 (270)
..+......|...
T Consensus 79 daI~~va~~La~~ 91 (127)
T PF10727_consen 79 DAIAEVAEQLAQY 91 (127)
T ss_dssp CHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHh
Confidence 8777777766543
No 496
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.71 E-value=0.06 Score=39.88 Aligned_cols=81 Identities=21% Similarity=0.252 Sum_probs=56.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHhCCCceeecCCc---hhHHHHHHhHcC--CCcc
Q 042426 79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-VDLLKHKFGFDDAFNYKEE---PDLDAALNRCFP--EGID 152 (270)
Q Consensus 79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-~~~~~~~~g~~~vi~~~~~---~~~~~~i~~~~~--~~~d 152 (270)
.+|-.-+|+|+.++.|.+.+..+...|+.|+..+-...+ .+.++ ++|-.-++...+. .+....+...-. |..|
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence 345678999999999999999999999999888865554 45555 8887645443322 144444433322 3689
Q ss_pred EEEeCCCc
Q 042426 153 IYFENVGG 160 (270)
Q Consensus 153 ~v~d~~g~ 160 (270)
..++|.|.
T Consensus 86 ~~vncagi 93 (260)
T KOG1199|consen 86 ALVNCAGI 93 (260)
T ss_pred eeeeccce
Confidence 99999994
No 497
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=95.71 E-value=0.031 Score=44.34 Aligned_cols=101 Identities=20% Similarity=0.292 Sum_probs=61.9
Q ss_pred hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---CCCce--eecCCchhHHHHHHhH
Q 042426 74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKF---GFDDA--FNYKEEPDLDAALNRC 146 (270)
Q Consensus 74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~v--i~~~~~~~~~~~i~~~ 146 (270)
+....++|++||=.+ +|+|..+..+++..+ .+|++++-+++=++.++++. +...+ +.-+.. ++. +
T Consensus 41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~-~lp--~--- 112 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAE-DLP--F--- 112 (233)
T ss_dssp HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTT-B----S---
T ss_pred hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHH-Hhc--C---
Confidence 335678899999887 788888889998875 59999999998887777443 22211 111111 111 1
Q ss_pred cCCCccEEEeCCCc-------chHHHHHHccccCCEEEEEccc
Q 042426 147 FPEGIDIYFENVGG-------KMLDAVLLNMRICGHIAVCGMI 182 (270)
Q Consensus 147 ~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~ 182 (270)
.++-||.|.-+.|- ..+.+..+.|+|||+++.+...
T Consensus 113 ~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~ 155 (233)
T PF01209_consen 113 PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFS 155 (233)
T ss_dssp -TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeecc
Confidence 11249999987763 2678999999999999987663
No 498
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.70 E-value=0.07 Score=41.82 Aligned_cols=90 Identities=14% Similarity=0.133 Sum_probs=55.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV 158 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~ 158 (270)
++.+|||.|| |.++.-=+..+...|++|++++..-. ....+. +.|.-..+ .+ +|.+.- . .++++||-|+
T Consensus 24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~-~~~~i~~~-~r---~~~~~d--l--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK-KYGNLKLI-KG---NYDKEF--I--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH-hCCCEEEE-eC---CCChHH--h--CCCcEEEECC
Confidence 3568999998 99998888888888999999885431 222222 22221111 12 222111 1 2589999999
Q ss_pred CcchHHHHHHccc-cCCEEEEE
Q 042426 159 GGKMLDAVLLNMR-ICGHIAVC 179 (270)
Q Consensus 159 g~~~~~~~~~~l~-~~G~~v~~ 179 (270)
+.+.++..+...+ ..+.++..
T Consensus 94 dD~~vN~~I~~~a~~~~~lvn~ 115 (223)
T PRK05562 94 DDEKLNNKIRKHCDRLYKLYID 115 (223)
T ss_pred CCHHHHHHHHHHHHHcCCeEEE
Confidence 9877766665554 44666654
No 499
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=95.68 E-value=0.12 Score=37.89 Aligned_cols=96 Identities=17% Similarity=0.208 Sum_probs=63.7
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCC-----chhHHHHHHhHcCC-CccEEE
Q 042426 82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKE-----EPDLDAALNRCFPE-GIDIYF 155 (270)
Q Consensus 82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~-----~~~~~~~i~~~~~~-~~d~v~ 155 (270)
.+|+|+|+-|..|.+.++..+..++-|.-++-++.+. -....+++..+ ++...+++.+...+ ++|.||
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~ 77 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF 77 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence 4799999999999999999999999887777543221 11222333322 11333444455566 899999
Q ss_pred eCCCcc---------h------------------HHHHHHccccCCEEEEEcccc
Q 042426 156 ENVGGK---------M------------------LDAVLLNMRICGHIAVCGMIS 183 (270)
Q Consensus 156 d~~g~~---------~------------------~~~~~~~l~~~G~~v~~g~~~ 183 (270)
...|+= . ...+-..|+++|-+-+.|...
T Consensus 78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAka 132 (236)
T KOG4022|consen 78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKA 132 (236)
T ss_pred EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccccc
Confidence 877731 0 133456899999998887644
No 500
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=95.67 E-value=0.18 Score=41.76 Aligned_cols=86 Identities=20% Similarity=0.237 Sum_probs=60.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426 80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159 (270)
Q Consensus 80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g 159 (270)
.|.+|.|+|- |.+|...++.++..|.+|++..+.....+.+. ..|.. +. ++.+.+.+ .|+|+-++.
T Consensus 15 kgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~-~~G~~-v~------sl~Eaak~-----ADVV~llLP 80 (335)
T PRK13403 15 QGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAK-ADGFE-VM------SVSEAVRT-----AQVVQMLLP 80 (335)
T ss_pred CcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHH-HcCCE-EC------CHHHHHhc-----CCEEEEeCC
Confidence 4688999997 99999999999999999998876654555555 55652 21 34444443 789988886
Q ss_pred cc----hH-HHHHHccccCCEEEEE
Q 042426 160 GK----ML-DAVLLNMRICGHIAVC 179 (270)
Q Consensus 160 ~~----~~-~~~~~~l~~~G~~v~~ 179 (270)
.+ .+ ...+..|+++..++..
T Consensus 81 d~~t~~V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 81 DEQQAHVYKAEVEENLREGQMLLFS 105 (335)
T ss_pred ChHHHHHHHHHHHhcCCCCCEEEEC
Confidence 53 22 3567788888766543
Done!