BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042427
(229 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q499T2|GILT_RAT Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus
norvegicus GN=Ifi30 PE=2 SV=1
Length = 248
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 7 LTFFFPASLLLLSISPFGSSENVTVSVYYETLCPYCADFIVNHLVKLFQKGLNSIVNLRM 66
L F P LL S+ V VS+YYE+LC C F+V +L + + I+N+ +
Sbjct: 45 LCLFGPRRLL--------SAPPVNVSLYYESLCGACRYFLVRNLFPTWLMVME-IMNITL 95
Query: 67 IPWGNSMMQP-DGT--FVCQHGPGECLLNTIEACTISIYPDVVQHFSFIHCVERLALEKR 123
+P+GN+ + GT F CQHG EC LN +EAC + + + E +EK+
Sbjct: 96 VPYGNAQERNVSGTWEFTCQHGELECKLNKVEACLLDKLEKEAAFLTIVCMEEMEDMEKK 155
Query: 124 QAEWINCFELTKLGRVPIDCYRNGLGKLLEQKYATETAQLKPPHRFVPWVVVNNQPLQED 183
+ + ++C G L + A T L+PPH +VPWV+VN +PL D
Sbjct: 156 LGPCLQLYVPEVSPESIMECATGKRGTELMHENAQLTDALQPPHEYVPWVLVNEKPLT-D 214
Query: 184 FMNFANHVCKAYKGTGLPEACRSLPHNIPVNAESTSSVCY 223
+ VC+ Y+GT P+ C S+ A++ VCY
Sbjct: 215 PSQLLSSVCELYQGTEKPDICSSM-------ADAPREVCY 247
>sp|Q9ESY9|GILT_MOUSE Gamma-interferon-inducible lysosomal thiol reductase OS=Mus
musculus GN=Ifi30 PE=1 SV=3
Length = 248
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 29 VTVSVYYETLCPYCADFIVNHLVKLFQKGLNSIVNLRMIPWGNSMMQP-DGT--FVCQHG 85
V VS+YYE+LC C F+V L + + I+N+ ++P+GN+ + GT F CQHG
Sbjct: 59 VRVSLYYESLCGACRYFLVRDLFPTWLMVME-IMNITLVPYGNAQERNVSGTWEFTCQHG 117
Query: 86 PGECLLNTIEACTISIYPDVVQHFSFIHCVERLALEKRQAEWINCFELTKLGRVPIDCYR 145
EC LN +EAC + + + E +EK+ + + ++C
Sbjct: 118 ELECRLNMVEACLLDKLEKEAAFLTIVCMEEMDDMEKKLGPCLQVYAPEVSPESIMECAT 177
Query: 146 NGLGKLLEQKYATETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACR 205
G L + A T L PPH +VPWV+VN +PL+ D + VC+ Y+GT P+ C
Sbjct: 178 GKRGTQLMHENAQLTDALHPPHEYVPWVLVNEKPLK-DPSELLSIVCQLYQGTEKPDICS 236
Query: 206 SLPHNIPVNAESTSSVCY 223
S+ A+S VCY
Sbjct: 237 SI-------ADSPRKVCY 247
>sp|O17861|YVRI_CAEEL GILT-like protein F37H8.5 OS=Caenorhabditis elegans GN=F37H8.5 PE=1
SV=1
Length = 277
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 17/185 (9%)
Query: 26 SENVTVSVYYETLCPYCADFIVNHLVKLFQKGLNSIVNLRMIPWGNSMMQPDGTFVCQHG 85
++ + ++V E LCP C +F+ L + K + VN+ ++P+GN+ + DGT CQHG
Sbjct: 73 NQKINITVLIEALCPDCQNFLTKQLYPIVFKNFANYVNIELVPFGNAKVLEDGTIKCQHG 132
Query: 86 PGECLLNTIEACTISIYPDVVQHFSFIHCVERLALEKRQAEWIN----CFELTKLG---- 137
EC +N E C I D + C+E +L+K+ E+ + CFE ++G
Sbjct: 133 EEECSINKFEGCFIDSMQD-QSPLPTLSCIEE-SLQKK-VEFADAVQQCFEKLQIGGDIQ 189
Query: 138 RVPIDCYRNGLGKLLEQKYATETAQLKPP-HRFVPWVVVNNQPLQEDFMNFANH----VC 192
R+ C + LG L+ K A TA + P H+FVPWV++N L F F N +C
Sbjct: 190 RLTQSCLVSKLGADLQNKAAAATANVWPEQHKFVPWVIINGVSL-TSFQGFQNQLPTLLC 248
Query: 193 KAYKG 197
+ Y G
Sbjct: 249 EWYSG 253
>sp|P13284|GILT_HUMAN Gamma-interferon-inducible lysosomal thiol reductase OS=Homo
sapiens GN=IFI30 PE=1 SV=3
Length = 250
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 29 VTVSVYYETLCPYCADFIVNHLVKLFQKGLNSIVNLRMIPWGNSMMQ---PDGTFVCQHG 85
V V++YYE LC C F++ L + + I+N+ ++P+GN+ Q F CQHG
Sbjct: 62 VNVTLYYEALCGGCRAFLIRELFPTWLLVM-EILNVTLVPYGNAQEQNVSGRWEFKCQHG 120
Query: 86 PGECLLNTIEACTISIYPDVVQHFSFIHCVERLALEKRQAEWINCFELTKLGRVP---ID 142
EC N +EAC + D+ F I C+E E + C +L G P ++
Sbjct: 121 EEECKFNKVEACVLDEL-DMELAFLTIVCMEEF--EDMERSLPLCLQLYAPGLSPDTIME 177
Query: 143 CYRNGLGKLLEQKYATETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPE 202
C G L A T L+PPH +VPWV VN +PL ED VC+ Y+G P+
Sbjct: 178 CAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPL-EDQTQLLTLVCQLYQGKK-PD 235
Query: 203 ACRSLPHNIPVNAESTSSVCY 223
C P + S SVC+
Sbjct: 236 VC-------PSSTSSLRSVCF 249
>sp|A6QPN6|GILT_BOVIN Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus
GN=IFI30 PE=2 SV=1
Length = 244
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 29 VTVSVYYETLCPYCADFIVNHLVKLFQKGLNSIVNLRMIPWGNSM---MQPDGTFVCQHG 85
V VS+YYE LCP C +F++ L + L I+N+ ++P+GN+ + F CQHG
Sbjct: 56 VNVSLYYEALCPGCREFLIRELFPTWLMVL-EILNVTLVPYGNAQERNVSGKWEFTCQHG 114
Query: 86 PGECLLNTIEACTISIYPDVVQHFSFIHCVERLALEKRQAEWINCFELTKLGRVPIDCYR 145
ECLLN +EAC + + + + E +E+ + + ++C
Sbjct: 115 ERECLLNKVEACLLDQLEQKIAFLTIVCLEEMDDMEQNLKPCLQIYAPKVSADSIMECAT 174
Query: 146 NGLGKLLEQKYATETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACR 205
G L A T L+PPH++VPWVVVN + ++ D + + VC+ Y+G P+ C+
Sbjct: 175 GNRGMQLLHINAQLTDALRPPHKYVPWVVVNGEHMK-DAEHLLHLVCRLYQGQK-PDVCQ 232
>sp|B3SP85|GILT_PIG Gamma-interferon-inducible-lysosomal thiol reductase OS=Sus scrofa
GN=IFI30 PE=2 SV=1
Length = 246
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 22 PFGSSEN--VTVSVYYETLCPYCADFIVNHLVKLFQKGLNSIVNLRMIPWGNSM---MQP 76
P G S+ V V++YYE+LC C F+V L + + I+N+ ++P+GN+ +
Sbjct: 49 PVGKSDPPPVNVNLYYESLCNGCRYFLVRELFPTWLM-VWEILNVTLVPYGNAQERNVSG 107
Query: 77 DGTFVCQHGPGECLLNTIEACTISIYPDVVQHFSFIHCVERLALEKRQAEWINCFELTKL 136
F CQHG EC +N +EAC + + + + C+E L ++ E C ++
Sbjct: 108 RWEFTCQHGEQECKMNKVEACLLDKLEKNMAFLTIV-CIEELDDMEKNLE--PCLQIYAP 164
Query: 137 GRVP---IDCYRNGLGKLLEQKYATETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCK 193
P ++C G L A T LKPPH +VPWVVVN +P+ E VC+
Sbjct: 165 KVSPDSIMECAMGDRGMQLLHINAQLTDALKPPHEYVPWVVVNGKPMTEKD-QLLRLVCQ 223
Query: 194 AYKGTGLPEACRSLPHNIPVNAESTSSVCY 223
Y+G P+ C+ L A S VC+
Sbjct: 224 LYEGEK-PDVCQIL-------ASSHKEVCF 245
>sp|P34276|YKJ2_CAEEL GILT-like protein C02D5.2 OS=Caenorhabditis elegans GN=C02D5.2 PE=3
SV=1
Length = 323
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 29 VTVSVYYETLCPYCADFIVNHLVKLFQ-KGLNSIVNLRMIPWGNSMMQPDGTFV---CQH 84
V + VY E CP + F L K + G + + L +IP+G + G CQH
Sbjct: 139 VKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIPFGKARCTEKGNDFECQCQH 198
Query: 85 GPGECLLNTIEACTISIYPDVVQHFSFIHCVE-RLALEKRQAEWINCF------ELTKLG 137
GP EC +N + C I + ++ + C++ + +L+ E + C E ++
Sbjct: 199 GPTECQINQLMNCVIDRFGFPHRYLPGVLCMQGKYSLD----EAMKCVTENYPSEYERMR 254
Query: 138 RVPIDCYRNGLGKLLEQKYATETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKG 197
+C G+ L +TA L P F+PW+V+N + + +VC+A +
Sbjct: 255 ----ECASGTRGRRLLALSGQKTASLTPAIDFIPWIVINGSRNSDALYDLTQNVCEAMQ- 309
Query: 198 TGLPEACRS 206
+P AC+
Sbjct: 310 -PMPSACKD 317
>sp|Q61Z40|YO30_CAEBR GILT-like protein CBG03282 OS=Caenorhabditis briggsae GN=CBG03282
PE=3 SV=1
Length = 220
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 11/197 (5%)
Query: 8 TFFFPASLLLLSISPFGSSENVTVSVYYETLCPYCADFIVNHLVKLFQK-GLNSIVNLRM 66
+F F L + + E V + + E C + ++ H + +++ G +N
Sbjct: 12 SFLFILVLCSSKDTEVNNGEKVNIVAFGEGRCSDTSFWMKWHWLPMWRMLGSTGRINFEY 71
Query: 67 IPWG------NSMMQPDGTFVCQHGPGECLLNTIEACTISIYPDVVQHFSFIHCVERLAL 120
P+G +S D C HG ECLLN ++AC I P+ ++ + C++
Sbjct: 72 HPYGIKTTCVDSDSGDDVVCECHHGARECLLNQLQACVIEALPNFEEYMEVVTCIQGKQN 131
Query: 121 EKRQAEWINCF-ELTKLGRVP-IDCYRNGLGKLLEQKYATETAQLKPPHRFVPWVVVNNQ 178
AE CF E +KL R + C + G+ L + AQ+ P + PW+++N +
Sbjct: 132 ISMAAE--ACFNEPSKLERAKMMSCADSRHGRKLFSDHENFVAQMAPEMDWAPWILINGK 189
Query: 179 PLQEDFMNFANHVCKAY 195
+E + +C +
Sbjct: 190 RYKEAEEDLWQFLCDRF 206
>sp|Q23570|YO30_CAEEL GILT-like protein ZK669.3 OS=Caenorhabditis elegans GN=ZK669.3 PE=1
SV=1
Length = 218
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 11/181 (6%)
Query: 24 GSSENVTVSVYYETLCPYCADFIVNHLVKLFQK-GLNSIVNLRMIPWG------NSMMQP 76
+ + V + + E C + ++ H + +++ G +N P+G +S
Sbjct: 26 ANGDMVNIVAFGEGRCSDTSYWMKWHWLPMWRMLGSTGRINFDYHPYGIKTTCVDSESAD 85
Query: 77 DGTFVCQHGPGECLLNTIEACTISIYPDVVQHFSFIHCVERLALEKRQAEWINCFEL-TK 135
D C HG ECLLN ++AC I P+ + + C++ AE CFE TK
Sbjct: 86 DVVCDCHHGNRECLLNQLQACVIEALPNFEDYMEVVTCIQGKQNISMAAE--VCFEGPTK 143
Query: 136 LGRVP-IDCYRNGLGKLLEQKYATETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKA 194
L R ++C + G+ L AQ+ P + PW+++N +E + +C
Sbjct: 144 LDRTKMMECAESRHGRKLFSDQENIVAQMAPEMDWAPWILINGTRYKEAEEDLWQFLCDR 203
Query: 195 Y 195
+
Sbjct: 204 F 204
>sp|Q04095|POL_RSVSA Gag-Pro-Pol polyprotein OS=Avian leukosis virus RSA GN=gag-pro-pol
PE=3 SV=2
Length = 1603
Score = 35.0 bits (79), Expect = 0.38, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 159 ETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACRS 206
E A+L P PW + P E F++FAN + KA +G+ LP + R+
Sbjct: 381 EVARLAEPAG--PWADITQGP-SESFVDFANRLIKAVEGSDLPPSARA 425
>sp|O92956|POL_RSVSB Gag-Pro-Pol polyprotein OS=Rous sarcoma virus (strain
Schmidt-Ruppin B) GN=gag-pro-pol PE=1 SV=2
Length = 1603
Score = 35.0 bits (79), Expect = 0.40, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 159 ETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACRS 206
E A+L P PW + P E F++FAN + KA +G+ LP + R+
Sbjct: 381 EVARLAEPAG--PWADITQGP-SESFVDFANRLIKAVEGSDLPPSARA 425
>sp|P0C776|GAG_RSVSA Gag-Pro polyprotein OS=Avian leukosis virus RSA GN=gag-pro PE=3
SV=1
Length = 701
Score = 35.0 bits (79), Expect = 0.40, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 159 ETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACRS 206
E A+L P PW + P E F++FAN + KA +G+ LP + R+
Sbjct: 381 EVARLAEPAG--PWADITQGP-SESFVDFANRLIKAVEGSDLPPSARA 425
>sp|O92954|GAG_RSVSB Gag-Pro polyprotein OS=Rous sarcoma virus (strain Schmidt-Ruppin B)
GN=gag-pro PE=1 SV=1
Length = 701
Score = 35.0 bits (79), Expect = 0.41, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 159 ETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACRS 206
E A+L P PW + P E F++FAN + KA +G+ LP + R+
Sbjct: 381 EVARLAEPAG--PWADITQGP-SESFVDFANRLIKAVEGSDLPPSARA 425
>sp|P06444|GAG_AVIMD Gag polyprotein OS=Avian myelocytomatosis virus HBI GN=gag PE=4
SV=1
Length = 453
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 159 ETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACRS 206
E A+L P PW + P E F++FAN + KA +G+ LP + R+
Sbjct: 381 EVARLAEPAG--PWADITQGP-SESFVDFANRLIKAVEGSDLPPSARA 425
>sp|P03323|GAG_AVIMC Gag polyprotein OS=Avian myelocytomatosis virus MC29 GN=gag PE=4
SV=1
Length = 453
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 159 ETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACRS 206
E A+L P PW + P E F++FAN + KA +G+ LP + R+
Sbjct: 381 EVARLAEPAG--PWADITQGP-SESFVDFANRLIKAVEGSDLPPSARA 425
>sp|O95619|YETS4_HUMAN YEATS domain-containing protein 4 OS=Homo sapiens GN=YEATS4 PE=1
SV=1
Length = 227
Score = 34.3 bits (77), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 49 HLVKLFQKGLNSIVNLRMI--PWGNSMMQPDGTFVCQHGPGECLLNTIEACTISIYPDVV 106
HL+KLFQ N+++ + + + + M+ D T + Q LL T T+ Y
Sbjct: 116 HLLKLFQSDTNAMLGKKTVVSEFYDEMIFQDPTAMMQQ-----LLTTSRQLTLGAYKHET 170
Query: 107 QHFSF-IHCVERLALEKRQA--EWINCFELTKLGRVPIDCYRNGLGKLLEQKYATE 159
+ + E+L K++ E E K R I+C +N + KL E A +
Sbjct: 171 EFAELEVKTREKLEAAKKKTSFEIAELKERLKASRETINCLKNEIRKLEEDDQAKD 226
>sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein OS=Rous sarcoma virus (strain Prague C)
GN=gag-pro-pol PE=1 SV=2
Length = 1603
Score = 34.3 bits (77), Expect = 0.74, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 159 ETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACRS 206
E A+L P PW + P E F++FAN + KA +G+ LP + R+
Sbjct: 381 EVARLAEPAG--PWADIMQGP-SESFVDFANRLIKAVEGSDLPPSARA 425
>sp|P03322|GAG_RSVP Gag-Pro polyprotein OS=Rous sarcoma virus (strain Prague C)
GN=gag-pro PE=1 SV=1
Length = 701
Score = 34.3 bits (77), Expect = 0.80, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 159 ETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACRS 206
E A+L P PW + P E F++FAN + KA +G+ LP + R+
Sbjct: 381 EVARLAEPAG--PWADIMQGP-SESFVDFANRLIKAVEGSDLPPSARA 425
>sp|A8LQ63|DNAJ_DINSH Chaperone protein DnaJ OS=Dinoroseobacter shibae (strain DFL 12)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 192 CKAYKGTGLPEACRSLPHNIPVNAESTSSVCYTGEG 227
C+A +G G E R+L NIP E+ + + GEG
Sbjct: 208 CQACRGAGREEKTRALSVNIPAGVETGTRIRLAGEG 243
>sp|B0SRF0|DNAJ_LEPBP Chaperone protein DnaJ OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1
Length = 375
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 192 CKAYKGTGLPEACRSLPHNIPVNAESTSSVCYTGEGKN 229
CK KG GL E R++ IP ES S + +GEG++
Sbjct: 208 CKTCKGEGLTEKRRTIHIKIPAGVESGSRLKVSGEGES 245
>sp|B0SHT0|DNAJ_LEPBA Chaperone protein DnaJ OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / Ames) GN=dnaJ PE=3 SV=1
Length = 375
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 192 CKAYKGTGLPEACRSLPHNIPVNAESTSSVCYTGEGKN 229
CK KG GL E R++ IP ES S + +GEG++
Sbjct: 208 CKTCKGEGLTEKRRTIHIKIPAGVESGSRLKVSGEGES 245
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,978,775
Number of Sequences: 539616
Number of extensions: 3644751
Number of successful extensions: 6439
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 6407
Number of HSP's gapped (non-prelim): 25
length of query: 229
length of database: 191,569,459
effective HSP length: 113
effective length of query: 116
effective length of database: 130,592,851
effective search space: 15148770716
effective search space used: 15148770716
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)