Your job contains 1 sequence.
>042428
MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLSVPP
PGVDVWLPSDSLGTAFPQVDIEDAGLSTSESDHEDDSLSIFPLKNA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042428
(106 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2056558 - symbol:AT2G28480 species:3702 "Arabi... 224 7.1e-20 2
TAIR|locus:2123276 - symbol:AT4G13070 species:3702 "Arabi... 207 1.6e-16 1
TAIR|locus:2094438 - symbol:LOH1 "LAG One Homologue 1" sp... 149 1.3e-11 2
TAIR|locus:2091458 - symbol:AT3G27550 species:3702 "Arabi... 140 4.2e-10 2
TAIR|locus:2096662 - symbol:CFM2 "CRM family member 2" sp... 101 6.2e-07 2
TAIR|locus:2094997 - symbol:EMB1865 "embryo defective 186... 115 1.0e-05 1
TAIR|locus:2094558 - symbol:CFM3A "CRM family member 3A" ... 97 4.0e-05 2
>TAIR|locus:2056558 [details] [associations]
symbol:AT2G28480 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
EMBL:AC006587 Gene3D:3.30.110.60 SUPFAM:SSF75471
HOGENOM:HOG000241798 EMBL:BT011753 EMBL:AK226713 IPI:IPI00526248
PIR:D84685 RefSeq:NP_180415.1 UniGene:At.50106
ProteinModelPortal:Q9SK10 SMR:Q9SK10 EnsemblPlants:AT2G28480.1
GeneID:817396 KEGG:ath:AT2G28480 TAIR:At2g28480 eggNOG:NOG245924
InParanoid:Q9SK10 OMA:ANRKDPR PhylomeDB:Q9SK10
ProtClustDB:CLSN2913133 Genevestigator:Q9SK10 Uniprot:Q9SK10
Length = 372
Score = 224 (83.9 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 40/57 (70%), Positives = 48/57 (84%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M QKRS+ +P GRR VFGGVILNMH+HWKKHE VKV C SKPGQ+ ++AEE+A+LS
Sbjct: 175 MGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLS 231
Score = 32 (16.3 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 87 STSESDHEDDSL 98
S+SE + ED+ L
Sbjct: 339 SSSEDEDEDEEL 350
>TAIR|locus:2123276 [details] [associations]
symbol:AT4G13070 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003723
Gene3D:3.30.110.60 SUPFAM:SSF75471 EMBL:BT022043 EMBL:BT029203
EMBL:AK175251 EMBL:AK176471 EMBL:AK176848 IPI:IPI00516587
RefSeq:NP_193043.2 UniGene:At.43316 ProteinModelPortal:Q67YJ7
SMR:Q67YJ7 EnsemblPlants:AT4G13070.1 GeneID:826921
KEGG:ath:AT4G13070 TAIR:At4g13070 eggNOG:NOG314366
HOGENOM:HOG000241798 InParanoid:Q67YJ7 OMA:NELRFYR PhylomeDB:Q67YJ7
ProtClustDB:CLSN2918582 Genevestigator:Q67YJ7 Uniprot:Q67YJ7
Length = 343
Score = 207 (77.9 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 37/56 (66%), Positives = 48/56 (85%)
Query: 3 QKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKP-SKPGQINEFAEEIARLS 57
+KR + + GRR VFGGV+LN+H+HWKKHE VKV CKP +KPGQ++E+AEE+ARLS
Sbjct: 195 EKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLS 250
>TAIR|locus:2094438 [details] [associations]
symbol:LOH1 "LAG One Homologue 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042761 "very
long-chain fatty acid biosynthetic process" evidence=IGI]
[GO:0050291 "sphingosine N-acyltransferase activity" evidence=IGI]
InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295 SMART:SM01103
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
EMBL:AB025639 GO:GO:0042761 Gene3D:3.30.110.60 SUPFAM:SSF75471
GO:GO:0050291 KO:K01148 EMBL:AK176804 IPI:IPI00542084
RefSeq:NP_189171.2 UniGene:At.37388 ProteinModelPortal:Q67XL4
SMR:Q67XL4 PaxDb:Q67XL4 PRIDE:Q67XL4 EnsemblPlants:AT3G25440.1
GeneID:822128 KEGG:ath:AT3G25440 TAIR:At3g25440 eggNOG:NOG254408
HOGENOM:HOG000240887 InParanoid:Q67XL4 OMA:RRYIPRL PhylomeDB:Q67XL4
ProtClustDB:CLSN2681576 Genevestigator:Q67XL4 Uniprot:Q67XL4
Length = 444
Score = 149 (57.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+ARL+
Sbjct: 188 MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLT 244
Score = 38 (18.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 80 DIEDAGLSTSESDHEDDSLS 99
D D G + SE + DD S
Sbjct: 403 DFGDLGKAKSEGEENDDDKS 422
>TAIR|locus:2091458 [details] [associations]
symbol:AT3G27550 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
Gene3D:3.30.110.60 SUPFAM:SSF75471 EMBL:AB025626 IPI:IPI00525575
RefSeq:NP_189392.1 UniGene:At.37034 ProteinModelPortal:Q9LT57
SMR:Q9LT57 EnsemblPlants:AT3G27550.1 GeneID:822377
KEGG:ath:AT3G27550 TAIR:At3g27550 eggNOG:NOG248894
HOGENOM:HOG000241218 InParanoid:Q9LT57 OMA:RMRKESG PhylomeDB:Q9LT57
ProtClustDB:CLSN2685015 Genevestigator:Q9LT57 Uniprot:Q9LT57
Length = 491
Score = 140 (54.3 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 29/54 (53%), Positives = 34/54 (62%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
K + +P G R VFGGV+ NMHMHWK HE V+V C +I E A IARLS
Sbjct: 106 KNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLS 159
Score = 34 (17.0 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 69 SDSLGTAFPQVDIEDA---GLSTSESDHEDDSLSI 100
SD T + D EDA +S D ED++ ++
Sbjct: 420 SDLDNTMWDSEDEEDAPPANYISSSDDDEDENRTV 454
>TAIR|locus:2096662 [details] [associations]
symbol:CFM2 "CRM family member 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;RCA] [GO:0000372 "Group I
intron splicing" evidence=IMP] [GO:0000373 "Group II intron
splicing" evidence=IMP] InterPro:IPR001890 Pfam:PF01985
PROSITE:PS51295 SMART:SM01103 EMBL:CP002686 GO:GO:0003723
Gene3D:3.30.110.60 SUPFAM:SSF75471 GO:GO:0000373 GO:GO:0000372
EMBL:AY136347 EMBL:BT010594 IPI:IPI00518423 RefSeq:NP_186786.2
UniGene:At.28082 ProteinModelPortal:Q8L7C2 SMR:Q8L7C2 IntAct:Q8L7C2
STRING:Q8L7C2 PaxDb:Q8L7C2 PRIDE:Q8L7C2 EnsemblPlants:AT3G01370.1
GeneID:821288 KEGG:ath:AT3G01370 TAIR:At3g01370 eggNOG:NOG300241
InParanoid:Q8L7C2 OMA:ASMIKLW PhylomeDB:Q8L7C2
ProtClustDB:CLSN2690653 ArrayExpress:Q8L7C2 Genevestigator:Q8L7C2
Uniprot:Q8L7C2
Length = 1011
Score = 101 (40.6 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFC 38
GRR VF G I NMH+HWK E+VK+ C
Sbjct: 601 GRRGVFDGTIENMHLHWKYRELVKIIC 627
Score = 51 (23.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 19/48 (39%), Positives = 21/48 (43%)
Query: 56 LSVPPPGVDVWLPSDSLGTAFP-----QVDIEDAGLSTSESDHEDDSL 98
LSVP G + W DS G P Q ED S S HE +SL
Sbjct: 764 LSVPSSGEENW-EDDSEGEVDPLTTSSQEYQEDESESASSQRHEGNSL 810
>TAIR|locus:2094997 [details] [associations]
symbol:EMB1865 "embryo defective 1865" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0009737
"response to abscisic acid stimulus" evidence=IDA] [GO:0006655
"phosphatidylglycerol biosynthetic process" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0016117
"carotenoid biosynthetic process" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] InterPro:IPR001890 Pfam:PF01985
PROSITE:PS51295 SMART:SM01103 GO:GO:0009737 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AB026658
Gene3D:3.30.110.60 SUPFAM:SSF75471 HOGENOM:HOG000241574
EMBL:AY063908 IPI:IPI00520842 RefSeq:NP_188468.1 UniGene:At.20890
ProteinModelPortal:Q9LS51 SMR:Q9LS51 STRING:Q9LS51 PaxDb:Q9LS51
PRIDE:Q9LS51 EnsemblPlants:AT3G18390.1 GeneID:821368
KEGG:ath:AT3G18390 TAIR:At3g18390 eggNOG:NOG326934
InParanoid:Q9LS51 OMA:DMKTAHE PhylomeDB:Q9LS51
ProtClustDB:CLSN2684381 ArrayExpress:Q9LS51 Genevestigator:Q9LS51
Uniprot:Q9LS51
Length = 848
Score = 115 (45.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 28/54 (51%), Positives = 33/54 (61%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINE-FAEEIARL 56
K + LP G R VF GVI NMH+HWK E+VK+ K Q N+ F EE ARL
Sbjct: 667 KMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISK-----QKNQAFVEETARL 715
>TAIR|locus:2094558 [details] [associations]
symbol:CFM3A "CRM family member 3A" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0000373 "Group II
intron splicing" evidence=IMP] [GO:0048316 "seed development"
evidence=IGI] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 GO:GO:0009507 EMBL:CP002686 GO:GO:0003723
GO:GO:0048316 Gene3D:3.30.110.60 SUPFAM:SSF75471 GO:GO:0000373
IPI:IPI00537962 RefSeq:NP_188947.2 UniGene:At.6125 UniGene:At.71222
ProteinModelPortal:F4J2U9 SMR:F4J2U9 PRIDE:F4J2U9
EnsemblPlants:AT3G23070.1 GeneID:821881 KEGG:ath:AT3G23070
OMA:VEILRHE Uniprot:F4J2U9
Length = 881
Score = 97 (39.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
K + L GRR VF G + NMH+HWK E+VK+ K
Sbjct: 652 KMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK 687
Score = 36 (17.7 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 76 FPQVDIEDAGLSTSESDHEDDSLSIFP 102
+ ++D+ A S E+D EDD FP
Sbjct: 792 YNKLDMAYAS-SDEETDEEDDD-DAFP 816
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 106 106 0.00091 102 3 11 22 0.46 30
29 0.39 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 577 (61 KB)
Total size of DFA: 128 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.79u 0.15s 12.94t Elapsed: 00:00:00
Total cpu time: 12.79u 0.15s 12.94t Elapsed: 00:00:00
Start: Fri May 10 07:33:52 2013 End: Fri May 10 07:33:52 2013