BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042428
(106 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359478175|ref|XP_002266278.2| PREDICTED: uncharacterized protein LOC100250974 [Vitis vinifera]
Length = 711
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 50/57 (87%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
MAQKRS+ +P GRR VFGGVILNMHMHWKKHE VKV CKP KPGQ++E+A EIARLS
Sbjct: 465 MAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQVHEYANEIARLS 521
>gi|297743805|emb|CBI36688.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 51/61 (83%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLSVPP 60
MAQKRS+ +P GRR VFGGVILNMHMHWKKHE VKV CKP KPGQ++E+A EIARLS
Sbjct: 86 MAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQVHEYANEIARLSGGT 145
Query: 61 P 61
P
Sbjct: 146 P 146
>gi|449437795|ref|XP_004136676.1| PREDICTED: uncharacterized protein LOC101208777 [Cucumis sativus]
gi|449494725|ref|XP_004159629.1| PREDICTED: uncharacterized LOC101208777 [Cucumis sativus]
Length = 431
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 51/57 (89%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M QKRS+ +P GRR VFGGVILNMHMHWKKHE VKV+CKP KPGQ++E+A+EIARLS
Sbjct: 179 MGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLS 235
>gi|147820521|emb|CAN67658.1| hypothetical protein VITISV_012474 [Vitis vinifera]
Length = 375
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 51/61 (83%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLSVPP 60
MAQKRS+ +P GRR VFGGVILNMHMHWKKHE VKV CKP KPGQ++E+A EIARLS
Sbjct: 129 MAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQVHEYANEIARLSGGT 188
Query: 61 P 61
P
Sbjct: 189 P 189
>gi|356544514|ref|XP_003540695.1| PREDICTED: uncharacterized protein LOC100796393 [Glycine max]
Length = 426
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/57 (75%), Positives = 51/57 (89%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
MAQKRS+ L GRR +FGGV+LNMHMHWKKHE VKVFCKP KPGQ++E+A+E+ARLS
Sbjct: 183 MAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVFCKPCKPGQVHEYAQELARLS 239
>gi|226509977|ref|NP_001151028.1| CFM6 [Zea mays]
gi|195643764|gb|ACG41350.1| CFM6 [Zea mays]
gi|238011754|gb|ACR36912.1| unknown [Zea mays]
Length = 394
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
++QK+S+ +P GRR VFGGVILNMH+HWKKHE VKV CKP KPGQI E+A EIARLS
Sbjct: 184 VSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLS 240
>gi|242055631|ref|XP_002456961.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
gi|241928936|gb|EES02081.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
Length = 405
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
++QK+S+ +P GRR VFGGVILNMH+HWKKHE VKV CKP KPGQI E+A EIARLS
Sbjct: 184 VSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLS 240
>gi|57900098|dbj|BAD88160.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900278|dbj|BAD87111.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
Length = 394
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
++QK+S+ +P GRR VFGGVILNMH+HWKKHE VKV CKP KPGQI E+A EIARLS
Sbjct: 183 VSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLS 239
>gi|115442347|ref|NP_001045453.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|57900096|dbj|BAD88158.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900276|dbj|BAD87109.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|113534984|dbj|BAF07367.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|215768161|dbj|BAH00390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189771|gb|EEC72198.1| hypothetical protein OsI_05277 [Oryza sativa Indica Group]
gi|222619906|gb|EEE56038.1| hypothetical protein OsJ_04827 [Oryza sativa Japonica Group]
Length = 415
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
++QK+S+ +P GRR VFGGVILNMH+HWKKHE VKV CKP KPGQI E+A EIARLS
Sbjct: 183 VSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLS 239
>gi|57900097|dbj|BAD88159.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900277|dbj|BAD87110.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|215695021|dbj|BAG90212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 417
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
++QK+S+ +P GRR VFGGVILNMH+HWKKHE VKV CKP KPGQI E+A EIARLS
Sbjct: 183 VSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLS 239
>gi|357131757|ref|XP_003567501.1| PREDICTED: uncharacterized protein LOC100829186 [Brachypodium
distachyon]
Length = 402
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
++QK+S+ +P GRR VFGGVILNMH+HWKKHE VKV CKP KPGQI E+A EIARLS
Sbjct: 186 VSQKKSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLS 242
>gi|255585329|ref|XP_002533362.1| conserved hypothetical protein [Ricinus communis]
gi|223526802|gb|EEF29024.1| conserved hypothetical protein [Ricinus communis]
Length = 412
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
MAQK+S+ +P GRR VFGGVILNMHMHWKKHE VKV C KPGQ++E+A+EIARLS
Sbjct: 155 MAQKQSNYVPLGRRGVFGGVILNMHMHWKKHETVKVICNFCKPGQVHEYAQEIARLS 211
>gi|224095670|ref|XP_002310431.1| predicted protein [Populus trichocarpa]
gi|222853334|gb|EEE90881.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPS-KPGQINEFAEEIARLS 57
MAQK+S+ +P GRR VFGGVILNMHMHWKKHE VKV C S KPGQ+ EFA+EIARLS
Sbjct: 124 MAQKKSNYVPIGRRGVFGGVILNMHMHWKKHETVKVICNSSCKPGQVQEFAQEIARLS 181
>gi|224128874|ref|XP_002328988.1| predicted protein [Populus trichocarpa]
gi|222839222|gb|EEE77573.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/56 (69%), Positives = 48/56 (85%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ + +P GRR VFGGV+LNMH+HWKKHE VKV CKP KPGQI+E+AEE+ARLS
Sbjct: 191 GEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVTCKPCKPGQIDEYAEELARLS 246
>gi|15226402|ref|NP_180415.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|4510396|gb|AAD21483.1| hypothetical protein [Arabidopsis thaliana]
gi|44917583|gb|AAS49116.1| At2g28480 [Arabidopsis thaliana]
gi|110741747|dbj|BAE98819.1| hypothetical protein [Arabidopsis thaliana]
gi|330253035|gb|AEC08129.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 372
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLSVPP 60
M QKRS+ +P GRR VFGGVILNMH+HWKKHE VKV C SKPGQ+ ++AEE+A+LS
Sbjct: 175 MGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGV 234
Query: 61 P----GVDVWLPSDSLGTAFPQV 79
P G D + G PQV
Sbjct: 235 PVNIIGDDTIIFYRGKGYVQPQV 257
>gi|297822421|ref|XP_002879093.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
gi|297324932|gb|EFH55352.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
Length = 345
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/57 (70%), Positives = 48/57 (84%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M QKRS+ +P GRR VFGGVILNMH+HWKKHE VKV C SKPGQ+ ++AEE+A+LS
Sbjct: 172 MGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLS 228
>gi|356524301|ref|XP_003530768.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ +P GRR VFGGV+LNMH+HWK HE VKV CKP KPGQ++E+AEE+ARLS
Sbjct: 137 GEKKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARLS 192
>gi|125555042|gb|EAZ00648.1| hypothetical protein OsI_22670 [Oryza sativa Indica Group]
Length = 304
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ + +P GRR VFGGV+LNMH+HWKKHE VKV CKP +PGQ+ E+AEE+ RLS
Sbjct: 170 GEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCRPGQVYEYAEELTRLS 225
>gi|356511313|ref|XP_003524371.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+++ +P GRR VFGGV+LNMH+HWK HE VKV CKP KPGQ++E+AEE+ARLS
Sbjct: 137 GERKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARLS 192
>gi|326525483|dbj|BAJ88788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 47/56 (83%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ + +P GRR VFGGV+LNMH+HWKKHE +KV CKP +PGQ+ E+AEE+ARLS
Sbjct: 185 GEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETMKVVCKPCRPGQVYEYAEELARLS 240
>gi|225444203|ref|XP_002270373.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Vitis vinifera]
gi|296089227|emb|CBI38999.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ + +P GRR VFGGV+LNMH+HWKKHE VKV CKP K GQ+ E+AEE+ARLS
Sbjct: 134 GEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCKVGQVYEYAEELARLS 189
>gi|449479099|ref|XP_004155504.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 290
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ + + GRR VFGGV+LNMHMHWKKHE VKV CKP KPGQ++E+AEE+ RLS
Sbjct: 148 GEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLS 203
>gi|255567361|ref|XP_002524660.1| conserved hypothetical protein [Ricinus communis]
gi|223536021|gb|EEF37679.1| conserved hypothetical protein [Ricinus communis]
Length = 260
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 47/56 (83%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ + + GRR VFGGV+LNMH+HWKKHE VK+ CKP KPGQI+++AEE+ARLS
Sbjct: 118 GEKKKNFILVGRRGVFGGVVLNMHLHWKKHETVKIICKPCKPGQIHQYAEELARLS 173
>gi|449438181|ref|XP_004136868.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 352
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ + + GRR VFGGV+LNMHMHWKKHE VKV CKP KPGQ++E+AEE+ RLS
Sbjct: 210 GEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLS 265
>gi|357478871|ref|XP_003609721.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355510776|gb|AES91918.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 399
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 45/56 (80%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ +P GRR VFGGV+LNMH+HWK HE VKV CKP KPGQ +E+AEE+ARLS
Sbjct: 264 GEKKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQAHEYAEELARLS 319
>gi|162459283|ref|NP_001105859.1| LOC732768 [Zea mays]
gi|89212802|gb|ABD63903.1| CFM6 [Zea mays]
gi|413918693|gb|AFW58625.1| hypothetical protein ZEAMMB73_217436 [Zea mays]
Length = 338
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ + +P GRR VFGGV+LNMH+HWKKHE VKV CKP +PGQ+ E+AEE+ RLS
Sbjct: 182 GEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVVCKPCRPGQVYEYAEELTRLS 237
>gi|357124470|ref|XP_003563923.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 337
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 47/56 (83%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ + +P GRR VFGGV+LNMH+HWKKHE +KV CKP +PGQ+ E+AEE+ARLS
Sbjct: 182 GEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETMKVVCKPCRPGQVYEYAEELARLS 237
>gi|115467732|ref|NP_001057465.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|113595505|dbj|BAF19379.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|125596971|gb|EAZ36751.1| hypothetical protein OsJ_21087 [Oryza sativa Japonica Group]
Length = 348
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ + +P GRR VFGGV+LNMH+HWKKHE VKV CKP +PGQ+ E+AEE+ RLS
Sbjct: 194 GEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCRPGQVYEYAEELTRLS 249
>gi|5123948|emb|CAB45506.1| putative protein [Arabidopsis thaliana]
gi|7268009|emb|CAB78349.1| putative protein [Arabidopsis thaliana]
Length = 332
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKP-SKPGQINEFAEEIARLS 57
+KR + + GRR VFGGV+LN+H+HWKKHE VKV CKP +KPGQ++E+AEE+ARLS
Sbjct: 183 GEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLS 239
>gi|297790600|ref|XP_002863185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309019|gb|EFH39444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKP-SKPGQINEFAEEIARLS 57
+KR + + GRR VFGGV+LN+H+HWKKHE VKV CKP +KPGQ++E+AEE+ARLS
Sbjct: 194 GEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLS 250
>gi|42566743|ref|NP_193043.2| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|51968644|dbj|BAD43014.1| putative protein [Arabidopsis thaliana]
gi|51971084|dbj|BAD44234.1| putative protein [Arabidopsis thaliana]
gi|51971893|dbj|BAD44611.1| putative protein [Arabidopsis thaliana]
gi|63003852|gb|AAY25455.1| At4g13070 [Arabidopsis thaliana]
gi|115646846|gb|ABJ17138.1| At4g13070 [Arabidopsis thaliana]
gi|332657826|gb|AEE83226.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 343
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKP-SKPGQINEFAEEIARLS 57
+KR + + GRR VFGGV+LN+H+HWKKHE VKV CKP +KPGQ++E+AEE+ARLS
Sbjct: 194 GEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLS 250
>gi|242076260|ref|XP_002448066.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
gi|241939249|gb|EES12394.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
Length = 338
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ + +P GRR VFGGV+LNMH+HWK HE VKV CKP +PGQ+ E+AEE+ RLS
Sbjct: 183 GEKKKNYVPVGRRGVFGGVVLNMHLHWKNHETVKVVCKPCRPGQVYEYAEELTRLS 238
>gi|357521229|ref|XP_003630903.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355524925|gb|AET05379.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 318
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 2 AQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+K+ +P GRR VFG V+LNMH+HWKKHE VKV CKP KPGQ +E+ EE+ R S
Sbjct: 199 GEKKKHYVPVGRRGVFGEVVLNMHLHWKKHETVKVICKPCKPGQAHEYTEELTRPS 254
>gi|115459160|ref|NP_001053180.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|21740788|emb|CAD41533.1| OSJNBb0091E11.2 [Oryza sativa Japonica Group]
gi|38346227|emb|CAE02049.2| OJ990528_30.7 [Oryza sativa Japonica Group]
gi|90265163|emb|CAH67731.1| H0522A01.2 [Oryza sativa Indica Group]
gi|113564751|dbj|BAF15094.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|116310744|emb|CAH67539.1| H0425E08.7 [Oryza sativa Indica Group]
gi|125548841|gb|EAY94663.1| hypothetical protein OsI_16441 [Oryza sativa Indica Group]
Length = 479
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M QK + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+ARLS
Sbjct: 190 MGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPDEVKEIASELARLS 246
>gi|125590852|gb|EAZ31202.1| hypothetical protein OsJ_15301 [Oryza sativa Japonica Group]
Length = 484
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M QK + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+ARLS
Sbjct: 190 MGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPDEVKEIASELARLS 246
>gi|242073570|ref|XP_002446721.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
gi|241937904|gb|EES11049.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
Length = 484
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M QK + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+ARLS
Sbjct: 196 MGQKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIATELARLS 252
>gi|449458069|ref|XP_004146770.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
gi|449516505|ref|XP_004165287.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 500
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ VKV K P ++ E A E+ARL+
Sbjct: 222 MGIKGKNYVPVGRRGIYQGVILNMHLHWKKHQTVKVVVKTFSPEEVKEIAAELARLT 278
>gi|297831446|ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329445|gb|EFH59864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1055
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++NE A E+ARL+
Sbjct: 802 MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVNEIAVELARLT 858
>gi|357167884|ref|XP_003581379.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 485
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M QK + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+A LS
Sbjct: 197 MGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIASELAILS 253
>gi|255572670|ref|XP_002527268.1| conserved hypothetical protein [Ricinus communis]
gi|223533361|gb|EEF35112.1| conserved hypothetical protein [Ricinus communis]
Length = 458
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ V+V K P ++ E A E+ARL+
Sbjct: 182 MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTVQVVVKTFSPEEVKEIAAELARLT 238
>gi|238007578|gb|ACR34824.1| unknown [Zea mays]
gi|414586597|tpg|DAA37168.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 342
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M QK + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+A LS
Sbjct: 54 MGQKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIAIELATLS 110
>gi|356501797|ref|XP_003519710.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ +KV K ++ E A E+ARLS
Sbjct: 129 MGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKEIATELARLS 185
>gi|212723506|ref|NP_001132081.1| uncharacterized protein LOC100193495 [Zea mays]
gi|194693368|gb|ACF80768.1| unknown [Zea mays]
gi|414586598|tpg|DAA37169.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
gi|414586599|tpg|DAA37170.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 485
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M QK + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+A LS
Sbjct: 197 MGQKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIAIELATLS 253
>gi|9279724|dbj|BAB01314.1| unnamed protein product [Arabidopsis thaliana]
Length = 1115
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+ARL+
Sbjct: 859 MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLT 915
>gi|224132018|ref|XP_002321235.1| predicted protein [Populus trichocarpa]
gi|222862008|gb|EEE99550.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ +KV K P ++ E A E+AR +
Sbjct: 141 MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFTPEEVKEIAAELARFT 197
>gi|79417439|ref|NP_189171.2| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|75116513|sp|Q67XL4.1|Y3544_ARATH RecName: Full=Uncharacterized CRM domain-containing protein
At3g25440, chloroplastic; Flags: Precursor
gi|51971805|dbj|BAD44567.1| unknown protein [Arabidopsis thaliana]
gi|332643490|gb|AEE77011.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 444
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+ARL+
Sbjct: 188 MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLT 244
>gi|357439925|ref|XP_003590240.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479288|gb|AES60491.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 472
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ ++V K ++ E A E+ARL+
Sbjct: 169 MGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLT 225
>gi|356498434|ref|XP_003518057.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like, partial [Glycine max]
Length = 383
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ +KV K ++ E A E+ARLS
Sbjct: 109 MGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKEIAAELARLS 165
>gi|168020023|ref|XP_001762543.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686276|gb|EDQ72666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 548
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
+ K + +P GRR ++GG I NMHMHWKKHE V++ C +I E E + RLS
Sbjct: 236 LGYKNKNYVPVGRRGIYGGTIQNMHMHWKKHETVRIDCDNFPKEKIKEMGETLERLS 292
>gi|225448146|ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Vitis vinifera]
Length = 401
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+ARL+
Sbjct: 124 MGLKCKNYVPIGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLT 180
>gi|145332683|ref|NP_001078207.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|332643491|gb|AEE77012.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 380
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+ARL+
Sbjct: 124 MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLT 180
>gi|297739537|emb|CBI29719.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ ++V K P ++ E A E+ARL+
Sbjct: 54 MGLKCKNYVPIGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLT 110
>gi|357439975|ref|XP_003590265.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479313|gb|AES60516.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 443
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M K + +P GRR ++ GVILNMH+HWKKH+ ++V K ++ E A E+ARL+
Sbjct: 169 MGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLT 225
>gi|356560779|ref|XP_003548665.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized CRM
domain-containing protein At3g25440, chloroplastic-like
[Glycine max]
Length = 273
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
M KR + +P GRR ++ GVIL+MH+H KKH+ +KV K ++ E A E+ARLS
Sbjct: 68 MGLKRKNNVPVGRRGIYQGVILSMHLHXKKHQTLKV-VKTFSAAEVKEIAAELARLS 123
>gi|413946392|gb|AFW79041.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 197
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 7 SCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLSVPPPG 62
+ LP G R VF GVI NMH+HWK E+VK+ K F EE ARL G
Sbjct: 19 AYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLS----FVEETARLLAYESG 70
>gi|255552728|ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
gi|223543418|gb|EEF44949.1| conserved hypothetical protein [Ricinus communis]
Length = 1009
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEI 53
GRR VF G I NMH+HWK E+VK+ CK ++E A+ +
Sbjct: 601 GRRGVFDGTIENMHLHWKYRELVKIICKERSLNAVHEVAQSL 642
>gi|326521980|dbj|BAK04118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 232
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
K + LP G R VF GVI NMH+HWK E+VK+ K F EE ARL
Sbjct: 61 KMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLA----FVEETARL 109
>gi|449441730|ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 760
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 28/51 (54%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAE 51
M K SCL GRR VF GVI +H HWK E+VKV Q+N A+
Sbjct: 624 MGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVNYTAK 674
>gi|449490080|ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 760
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 28/51 (54%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAE 51
M K SCL GRR VF GVI +H HWK E+VKV Q+N A+
Sbjct: 624 MGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVNYTAK 674
>gi|413946391|gb|AFW79040.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 266
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 7 SCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLSVPPPG 62
+ LP G R VF GVI NMH+HWK E+VK+ K F EE ARL G
Sbjct: 19 AYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLS----FVEETARLLAYESG 70
>gi|218194999|gb|EEC77426.1| hypothetical protein OsI_16218 [Oryza sativa Indica Group]
Length = 818
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
K S L GRR VF G + NMH+HWK E+VK+ CK
Sbjct: 400 KMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICK 435
>gi|125590660|gb|EAZ31010.1| hypothetical protein OsJ_15093 [Oryza sativa Japonica Group]
Length = 818
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
K S L GRR VF G + NMH+HWK E+VK+ CK
Sbjct: 400 KMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICK 435
>gi|21741981|emb|CAD41031.1| OSJNBa0060P14.12 [Oryza sativa Japonica Group]
gi|32492164|emb|CAE04823.1| OSJNBb0048E02.3 [Oryza sativa Japonica Group]
Length = 1012
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
K S L GRR VF G + NMH+HWK E+VK+ CK
Sbjct: 594 KMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICK 629
>gi|116310121|emb|CAH67138.1| OSIGBa0130P02.2 [Oryza sativa Indica Group]
Length = 1048
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
K S L GRR VF G + NMH+HWK E+VK+ CK
Sbjct: 630 KMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICK 665
>gi|297602873|ref|NP_001053020.2| Os04g0464800 [Oryza sativa Japonica Group]
gi|255675534|dbj|BAF14934.2| Os04g0464800 [Oryza sativa Japonica Group]
Length = 1042
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
K S L GRR VF G + NMH+HWK E+VK+ CK
Sbjct: 594 KMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICK 629
>gi|222632479|gb|EEE64611.1| hypothetical protein OsJ_19463 [Oryza sativa Japonica Group]
Length = 601
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 9 LPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
LP G R VF GVI NMH+HWK E+VK+ K + F EE ARL
Sbjct: 420 LPVGIRGVFDGVIENMHLHWKHREVVKLITKQ----KTLPFVEETARL 463
>gi|15229636|ref|NP_188468.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|11994102|dbj|BAB01105.1| unnamed protein product [Arabidopsis thaliana]
gi|17380904|gb|AAL36264.1| unknown protein [Arabidopsis thaliana]
gi|332642570|gb|AEE76091.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 848
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINE-FAEEIARL 56
K + LP G R VF GVI NMH+HWK E+VK+ K Q N+ F EE ARL
Sbjct: 667 KMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISK-----QKNQAFVEETARL 715
>gi|326507446|dbj|BAK03116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 775
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
K + LP G R VF GVI NMH+HWK E+VK+ K F EE ARL
Sbjct: 604 KMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLA----FVEETARL 652
>gi|167998334|ref|XP_001751873.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696971|gb|EDQ83308.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 590
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 9 LPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIAR-LSVPPPGVDVWL 67
L SGRR VF GV+ NMH+HWK E+VKV K G I E AE+ A+ L + GV V +
Sbjct: 171 LSSGRRGVFDGVVENMHLHWKHRELVKVIFK----GPIFE-AEQTAKILEMESGGVLVGI 225
Query: 68 PSDSLGTA 75
+ + G A
Sbjct: 226 VTTTKGQA 233
>gi|413918579|gb|AFW58511.1| CFM2 [Zea mays]
Length = 1039
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCK 39
GRR VF G I NMH+HWK E+VK+ CK
Sbjct: 650 GRRGVFDGTIENMHLHWKYRELVKIICK 677
>gi|357158137|ref|XP_003578028.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 962
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
K + L GRR VF G + NMH+HWK E+VK+ K Q+ A
Sbjct: 780 KMKAFLMLGRREVFAGTVQNMHLHWKHRELVKIIVKGKSFAQVKHIA 826
>gi|154986383|gb|ABS89145.1| CFM2 [Zea mays]
Length = 942
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCK 39
GRR VF G I NMH+HWK E+VK+ CK
Sbjct: 553 GRRGVFDGTIENMHLHWKYRELVKIICK 580
>gi|357167767|ref|XP_003581323.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 1053
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCK 39
GRR VF G I NMH+HWK E+VK+ CK
Sbjct: 658 GRRGVFDGTIENMHLHWKYRELVKIICK 685
>gi|413946390|gb|AFW79039.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 132
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 6 SSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLSVPPPG 62
+ LP G R VF GVI NMH+HWK E+VK+ K F EE ARL G
Sbjct: 18 KAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLS----FVEETARLLAYESG 70
>gi|297612106|ref|NP_001068192.2| Os11g0592400 [Oryza sativa Japonica Group]
gi|255680227|dbj|BAF28555.2| Os11g0592400, partial [Oryza sativa Japonica Group]
Length = 108
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 11 SGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
SGRR VF G I NMH+HWK E+VK+ K G + + A
Sbjct: 7 SGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIA 46
>gi|242044486|ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
gi|241923491|gb|EER96635.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
Length = 962
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLSVPPPGV 63
K + L GRR VF G + NMH+HWK E+VK+ + Q+ A L GV
Sbjct: 778 KMRAFLMLGRREVFDGTVQNMHLHWKHRELVKIIVRGKSFAQVKHIA---ISLEAESEGV 834
Query: 64 DVWLPSDSLGTAF 76
+ L S G A
Sbjct: 835 LISLDKTSKGYAI 847
>gi|47900539|gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group]
gi|50878415|gb|AAT85189.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 798
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 9 LPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
LP G R VF GVI NMH+HWK E+VK+ K + F EE ARL
Sbjct: 617 LPVGIRGVFDGVIENMHLHWKHREVVKLITKQ----KTLPFVEETARL 660
>gi|242076096|ref|XP_002447984.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
gi|241939167|gb|EES12312.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
Length = 800
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCK 39
GRR VF G I NMH+HWK E+VK+ CK
Sbjct: 655 GRRGVFDGTIENMHLHWKYRELVKIICK 682
>gi|125553229|gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indica Group]
Length = 801
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 9 LPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
LP G R VF GVI NMH+HWK E+VK+ K + F EE ARL
Sbjct: 620 LPVGIRGVFDGVIENMHLHWKHREVVKLITKQ----KTLPFVEETARL 663
>gi|326497411|dbj|BAK05795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1070
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCK 39
GRR VF G I NMH+HWK E+VK+ CK
Sbjct: 672 GRRGVFDGTIENMHLHWKYRELVKIICK 699
>gi|357128578|ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
K + LP G R VF GVI NMH+HWK E+VK+ K +NE A
Sbjct: 607 KMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLAFVNETA 653
>gi|154986387|gb|ABS89147.1| CFM2 alternative polyadenylation form 2 [Zea mays]
Length = 783
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCK 39
GRR VF G I NMH+HWK E+VK+ CK
Sbjct: 643 GRRGVFDGTIENMHLHWKYRELVKIICK 670
>gi|449440945|ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449477054|ref|XP_004154915.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 560
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
+ ++ LP G R VF GV+ NMH+HWK E+VK+ K F EE ARL
Sbjct: 365 RMTAYLPMGIRGVFDGVVENMHLHWKHRELVKLISKQKTLA----FVEETARL 413
>gi|168038664|ref|XP_001771820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676951|gb|EDQ63428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1106
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
K L GRR VFGG + NMH+HWK E+VK+ K
Sbjct: 767 KHKGYLLLGRRGVFGGTVENMHLHWKHRELVKILVK 802
>gi|357496109|ref|XP_003618343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355493358|gb|AES74561.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 1096
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIAR-LSVPPPGVDVWLPSD 70
GRR VF G + NMH+HWK E+VK+ C E+A + AR L G+ V +
Sbjct: 579 GRRGVFDGTVENMHLHWKYRELVKIICNQESV----EYAHQTARTLEAESGGILVAVERV 634
Query: 71 SLGTAF 76
+ G A
Sbjct: 635 NKGYAI 640
>gi|168024308|ref|XP_001764678.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683972|gb|EDQ70377.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 625
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
+ K + L GRR VF G + NMH+HWK E+VK+ K S P AE IA++
Sbjct: 453 LGLKMKAFLLLGRRGVFSGTVENMHLHWKYRELVKILVKTSLPE-----AERIAKI 503
>gi|255582755|ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
gi|223528164|gb|EEF30228.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 9 LPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
LP G R VF GVI NMH+HWK E+VK+ K FAE+ ARL
Sbjct: 639 LPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLA----FAEDTARL 682
>gi|30678323|ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana]
gi|22531018|gb|AAM97013.1| unknown protein [Arabidopsis thaliana]
gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana]
gi|332640136|gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana]
Length = 1011
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIA 54
GRR VF G I NMH+HWK E+VK+ C NE++ E A
Sbjct: 601 GRRGVFDGTIENMHLHWKYRELVKIIC--------NEYSIEAA 635
>gi|6692258|gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]
Length = 1020
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIA 54
GRR VF G I NMH+HWK E+VK+ C NE++ E A
Sbjct: 610 GRRGVFDGTIENMHLHWKYRELVKIIC--------NEYSIEAA 644
>gi|115478793|ref|NP_001062990.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|48716728|dbj|BAD23409.1| putative CRS1 [Oryza sativa Japonica Group]
gi|50726191|dbj|BAD33710.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113631223|dbj|BAF24904.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|125591023|gb|EAZ31373.1| hypothetical protein OsJ_15500 [Oryza sativa Japonica Group]
Length = 947
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
K + L GRR VF G + NMH+HWK E+VKV K Q+ A
Sbjct: 765 KMKAFLMLGRREVFDGTVQNMHLHWKHRELVKVLVKGKSFPQVKHIA 811
>gi|125549065|gb|EAY94887.1| hypothetical protein OsI_16687 [Oryza sativa Indica Group]
Length = 893
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
K + L GRR VF G + NMH+HWK E+VKV K Q+ A
Sbjct: 710 KMKAFLMLGRREVFDGTVQNMHLHWKHRELVKVLVKGKSFPQVKHIA 756
>gi|356573408|ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1027
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFC 38
K S L GRR VF G + NMH+HWK E+VK+ C
Sbjct: 557 KMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIIC 591
>gi|356576487|ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 835
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G I NMH+HWK E+VK+ K Q+ + A
Sbjct: 652 GRRGVFDGTIENMHLHWKYRELVKIIVKAKTFEQVKKIA 690
>gi|356529577|ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 791
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 9 LPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
LP G R VF GV+ NMH+HWK E+VK+ K F E+ ARL
Sbjct: 608 LPLGIRGVFDGVVENMHLHWKHRELVKLMTKQKTLA----FVEDTARL 651
>gi|297830494|ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
gi|297328969|gb|EFH59388.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
Length = 846
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
K + LP G R VF GVI NMH+HWK E+VK+ K F E+ ARL
Sbjct: 667 KMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKNLA----FVEDTARL 715
>gi|356564786|ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 794
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLSVPPPGVDVWLPSDS 71
GRR V+ G I NMH+HWK E+VK+ K Q+ + L GV V + D+
Sbjct: 639 GRRDVYAGTIENMHLHWKYRELVKLIVKGRNSAQVKHIS---ISLEAESGGVLVSVDKDT 695
Query: 72 LG 73
G
Sbjct: 696 RG 697
>gi|356527819|ref|XP_003532504.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 719
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 9 LPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
LP G R VF GVI NMH+HWK E+VK+ K F E+ ARL
Sbjct: 541 LPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTLA----FVEDTARL 584
>gi|356573410|ref|XP_003554854.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1028
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPS 41
GRR VF G + NMH+HWK E+VK+ C S
Sbjct: 585 GRRGVFDGTVENMHLHWKYRELVKIICNGS 614
>gi|168014862|ref|XP_001759970.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688720|gb|EDQ75095.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 512
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPS 41
GRR VF GVI NMH+HWK ++VK+ K S
Sbjct: 367 GRREVFSGVIENMHLHWKWRQLVKIIVKKS 396
>gi|162459980|ref|NP_001106061.1| CRM family member 3 [Zea mays]
gi|156789080|gb|ABU96081.1| CRM family member 3 [Zea mays]
Length = 842
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G I NMH+HWK E+VK+ K + A
Sbjct: 606 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIA 644
>gi|242071513|ref|XP_002451033.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
gi|241936876|gb|EES10021.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
Length = 895
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G I NMH+HWK E+VK+ K + A
Sbjct: 611 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIA 649
>gi|224059986|ref|XP_002300024.1| predicted protein [Populus trichocarpa]
gi|222847282|gb|EEE84829.1| predicted protein [Populus trichocarpa]
Length = 1012
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCK 39
G R VF G I NMH+HWK E+VK+ CK
Sbjct: 605 GERGVFDGTIENMHLHWKYRELVKIICK 632
>gi|302781424|ref|XP_002972486.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
gi|300159953|gb|EFJ26572.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
Length = 795
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCK 39
GRR VF GVI NMH+HWK E+VK+ K
Sbjct: 624 GRRGVFDGVIENMHLHWKHRELVKLILK 651
>gi|326492672|dbj|BAJ90192.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLSVPPPGVDVWLPSDS 71
GRR VF G I NMH+HWK E+VK+ K + A L V GV V + S
Sbjct: 623 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRTA---LSLEVESGGVLVSVDKVS 679
Query: 72 LGTAF 76
G A
Sbjct: 680 KGYAI 684
>gi|414591664|tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
Length = 1523
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G I NMH+HWK E+VK+ K + A
Sbjct: 1287 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIA 1325
>gi|357500379|ref|XP_003620478.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355495493|gb|AES76696.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 820
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 7 SCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
+ L G R VF GVI NMH+HWK E+VK+ K F E+ ARL
Sbjct: 638 AYLQLGIRGVFDGVIENMHLHWKHRELVKLVTKQKNRA----FVEDTARL 683
>gi|297803062|ref|XP_002869415.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
gi|297315251|gb|EFH45674.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
Length = 775
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR V+ G I NMH+HWK E+VKV + Q+ A
Sbjct: 626 GRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQVKHIA 664
>gi|357156286|ref|XP_003577404.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 881
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G I NMH+HWK E+VK+ K ++ A
Sbjct: 608 GRRGVFDGTIENMHLHWKYRELVKILVKVKSFTEVKRIA 646
>gi|356522763|ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 734
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 9 LPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
LP G R VF GV+ NMH+HWK E+VK+ K F E+ ARL
Sbjct: 608 LPLGIRGVFDGVVENMHLHWKHRELVKLMTKQKTVA----FVEDTARL 651
>gi|222616258|gb|EEE52390.1| hypothetical protein OsJ_34482 [Oryza sativa Japonica Group]
Length = 560
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G I NMH+HWK E+VK+ K G + + A
Sbjct: 460 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIA 498
>gi|357441009|ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355479830|gb|AES61033.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 838
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G I NMH+HWK E+VK+ K + + + A
Sbjct: 652 GRRGVFDGTIENMHLHWKYRELVKIIVKANNFEHVKKIA 690
>gi|414885161|tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea mays]
Length = 964
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
K + L GRR VF G + NMH+HWK E+VK+ + Q A
Sbjct: 782 KMRAFLMLGRREVFDGTVQNMHLHWKHRELVKIVVRGKSFAQAKHIA 828
>gi|225452088|ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1184
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQI 46
+ QK S L GRR VF GVI +H HWK EIVKV Q+
Sbjct: 646 IGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQV 691
>gi|77551737|gb|ABA94534.1| CRS1/YhbY domain containing protein, expressed [Oryza sativa
Japonica Group]
Length = 886
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G I NMH+HWK E+VK+ K G + + A
Sbjct: 614 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIA 652
>gi|297734212|emb|CBI15459.3| unnamed protein product [Vitis vinifera]
Length = 830
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
+ + + L G R VF GVI NMH+HWK E+VK+ K F E+ ARL
Sbjct: 635 LGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLA----FVEDTARL 686
>gi|224118814|ref|XP_002317913.1| predicted protein [Populus trichocarpa]
gi|222858586|gb|EEE96133.1| predicted protein [Populus trichocarpa]
Length = 806
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 9 LPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
LP G R VF GVI NMH+HWK E+VK+ K F E+ A+L
Sbjct: 630 LPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLA----FVEDTAKL 673
>gi|147815878|emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
Length = 850
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
+ + + L G R VF GVI NMH+HWK E+VK+ K F E+ ARL
Sbjct: 635 LGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLA----FVEDTARL 686
>gi|296087258|emb|CBI33632.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 23/36 (63%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKV 36
+ QK S L GRR VF GVI +H HWK EIVKV
Sbjct: 347 IGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKV 382
>gi|255551945|ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
gi|223543652|gb|EEF45180.1| conserved hypothetical protein [Ricinus communis]
Length = 773
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G + NMH+HWK E+VK+ K Q+ + A
Sbjct: 548 GRRGVFDGTVENMHLHWKYRELVKIILKAKNIEQVKKIA 586
>gi|302805129|ref|XP_002984316.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
gi|300148165|gb|EFJ14826.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
Length = 692
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIAR-LSVPPPGVDVWLPSD 70
GRR VF GVI NMH+HWK E+VK+ K A E+A+ L + G+ V + +
Sbjct: 509 GRRGVFDGVIENMHLHWKHRELVKLILKEKDKA----IALEVAKMLEIESGGILVGVVTT 564
Query: 71 SLGTA 75
S G A
Sbjct: 565 SKGQA 569
>gi|326492786|dbj|BAJ90249.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQIN 47
GRR +F GVI +H HWK EIVKV K ++ QI
Sbjct: 601 GRRGIFDGVIEEIHQHWKHKEIVKVITKQNQAYQIT 636
>gi|326499694|dbj|BAJ86158.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQIN 47
GRR +F GVI +H HWK EIVKV K ++ QI
Sbjct: 601 GRRGIFDGVIEEIHQHWKHKEIVKVITKQNQAYQIT 636
>gi|225432918|ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Vitis vinifera]
gi|297737163|emb|CBI26364.3| unnamed protein product [Vitis vinifera]
Length = 902
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G + NMH+HWK E+VK+ K Q+ + A
Sbjct: 667 GRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTA 705
>gi|147852748|emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
Length = 902
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G + NMH+HWK E+VK+ K Q+ + A
Sbjct: 667 GRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTA 705
>gi|218201029|gb|EEC83456.1| hypothetical protein OsI_28955 [Oryza sativa Indica Group]
Length = 514
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQI 46
GRR VF GVI +H HWK E+VKV K ++ QI
Sbjct: 377 GRRGVFEGVIEEIHQHWKHKEVVKVITKQNQANQI 411
>gi|224111046|ref|XP_002315729.1| predicted protein [Populus trichocarpa]
gi|222864769|gb|EEF01900.1| predicted protein [Populus trichocarpa]
Length = 894
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G + NMH+HWK E+VK+ K Q+ + A
Sbjct: 656 GRRGVFDGTVENMHLHWKYRELVKIILKAKSFEQVKKIA 694
>gi|302761182|ref|XP_002964013.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
gi|300167742|gb|EFJ34346.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
Length = 555
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 9 LPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEI 53
L +GRR V+ G+I NMH+HWK E+VKV K I + A+ I
Sbjct: 455 LLAGRRGVYSGIIENMHLHWKYRELVKVVYKGKDRMDIEDTAKMI 499
>gi|334187011|ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|332660271|gb|AEE85671.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 841
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR V+ G I NMH+HWK E+VKV + Q+ A
Sbjct: 669 GRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQVKHIA 707
>gi|5123569|emb|CAB45335.1| putative protein [Arabidopsis thaliana]
gi|7269874|emb|CAB79733.1| putative protein [Arabidopsis thaliana]
Length = 776
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR V+ G I NMH+HWK E+VKV + Q+ A
Sbjct: 627 GRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQVKHIA 665
>gi|449432614|ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 874
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEI 53
GRR VF G + NMH+HWK E+VK+ K + + A ++
Sbjct: 679 GRREVFDGTVENMHLHWKYRELVKIMIKANSFDHVKNIALQL 720
>gi|302766798|ref|XP_002966819.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
gi|300164810|gb|EFJ31418.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
Length = 672
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFC-KPSKPGQINEFAEEIARLS 57
G+R ++GGVI N+H +WK HE V++ C + + + E+ARLS
Sbjct: 147 GKRGIYGGVIHNIHTNWKFHETVRIKCPRHNSMEETRRIGAELARLS 193
>gi|297818350|ref|XP_002877058.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
gi|297322896|gb|EFH53317.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
Length = 488
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 22/35 (62%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMHMHWK HE V+V C +I E A IARLS
Sbjct: 125 NMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLS 159
>gi|15232195|ref|NP_189392.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|11994182|dbj|BAB01285.1| unnamed protein product [Arabidopsis thaliana]
gi|332643815|gb|AEE77336.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 491
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 22/35 (62%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMHMHWK HE V+V C +I E A IARLS
Sbjct: 125 NMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLS 159
>gi|224091282|ref|XP_002309217.1| predicted protein [Populus trichocarpa]
gi|222855193|gb|EEE92740.1| predicted protein [Populus trichocarpa]
Length = 977
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR VF G I NMH+HWK E+VK+ + Q+ A
Sbjct: 802 GRRGVFDGTIENMHLHWKYRELVKIIVERKGIAQVKHIA 840
>gi|449452735|ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 846
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR V+ G + NMH+HWK E+VK+ + Q+ A
Sbjct: 717 GRRGVYDGTVENMHLHWKFRELVKIIVRGKTLQQVKHVA 755
>gi|224055583|ref|XP_002298551.1| predicted protein [Populus trichocarpa]
gi|222845809|gb|EEE83356.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 22/35 (62%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMHMHWK HE V+V C +I E A IARLS
Sbjct: 114 NMHMHWKFHETVQVSCDNFPKEKIKEMATMIARLS 148
>gi|359484307|ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 884
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
G R +F G + NMH+HWK E+VK+ K Q+ A
Sbjct: 705 GTRGIFDGTVENMHLHWKYRELVKIIVKGKNFAQVKHIA 743
>gi|302768979|ref|XP_002967909.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
gi|300164647|gb|EFJ31256.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
Length = 557
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEI 53
K + L GRR V+ G+I NMH+HWK E+VKV K I + A+ I
Sbjct: 452 KMKAFLLLGRRGVYSGIIENMHLHWKYRELVKVVYKGKDRMDIEDTAKMI 501
>gi|297738658|emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
G R +F G + NMH+HWK E+VK+ K Q+ A
Sbjct: 702 GTRGIFDGTVENMHLHWKYRELVKIIVKGKNFAQVKHIA 740
>gi|357145812|ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 730
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQI 46
GRR VF GVI +H HWK EIVKV K ++ QI
Sbjct: 602 GRRGVFDGVIEEIHQHWKHKEIVKVITKQNQSYQI 636
>gi|222640429|gb|EEE68561.1| hypothetical protein OsJ_27045 [Oryza sativa Japonica Group]
Length = 725
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQI 46
GRR VF GVI +H HWK E+VKV K ++ QI
Sbjct: 588 GRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQI 622
>gi|115476078|ref|NP_001061635.1| Os08g0360100 [Oryza sativa Japonica Group]
gi|75132343|sp|Q6YYA3.1|CRS1_ORYSJ RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|38637564|dbj|BAD03815.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113623604|dbj|BAF23549.1| Os08g0360100 [Oryza sativa Japonica Group]
Length = 725
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQI 46
GRR VF GVI +H HWK E+VKV K ++ QI
Sbjct: 588 GRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQI 622
>gi|2244807|emb|CAB10230.1| hypothetical protein [Arabidopsis thaliana]
gi|7268157|emb|CAB78493.1| hypothetical protein [Arabidopsis thaliana]
Length = 918
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
K + L GRR VF G + NMH+HWK E++K+ K
Sbjct: 690 KMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVK 725
>gi|334186525|ref|NP_193187.3| CRM family member 3B [Arabidopsis thaliana]
gi|332658053|gb|AEE83453.1| CRM family member 3B [Arabidopsis thaliana]
Length = 907
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
K + L GRR VF G + NMH+HWK E++K+ K
Sbjct: 679 KMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVK 714
>gi|449515235|ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 1053
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFC 38
GRR VF G + NMH+HWK E+VK+
Sbjct: 623 GRRGVFDGTVENMHLHWKYRELVKIIT 649
>gi|242078893|ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
gi|241940565|gb|EES13710.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
Length = 728
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQI 46
GRR +F GVI +H HWK E+VKV K ++ QI
Sbjct: 599 GRRGIFDGVIEEIHQHWKHKEVVKVITKQNQARQI 633
>gi|449459492|ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 1032
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFC 38
GRR VF G + NMH+HWK E+VK+
Sbjct: 602 GRRGVFDGTVENMHLHWKYRELVKIIT 628
>gi|30686898|ref|NP_188947.2| CRM family member 3A [Arabidopsis thaliana]
gi|332643191|gb|AEE76712.1| CRM family member 3A [Arabidopsis thaliana]
Length = 881
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
K + L GRR VF G + NMH+HWK E+VK+ K
Sbjct: 652 KMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK 687
>gi|9294196|dbj|BAB02098.1| unnamed protein product [Arabidopsis thaliana]
Length = 850
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
K + L GRR VF G + NMH+HWK E+VK+ K
Sbjct: 621 KMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK 656
>gi|297800788|ref|XP_002868278.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
gi|297314114|gb|EFH44537.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
Length = 919
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCK 39
GRR VF G + NMH+HWK E++K+ K
Sbjct: 692 GRRGVFDGTVENMHLHWKYRELIKILVK 719
>gi|414870652|tpg|DAA49209.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 715
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQI 46
GRR +F GVI +H HWK E+VKV K ++ QI
Sbjct: 586 GRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQI 620
>gi|162463484|ref|NP_001105008.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic precursor [Zea mays]
gi|75173308|sp|Q9FYT6.1|CRS1_MAIZE RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|9837550|gb|AAG00595.1|AF290414_1 CRS1 [Zea mays]
Length = 715
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQI 46
GRR +F GVI +H HWK E+VKV K ++ QI
Sbjct: 586 GRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQI 620
>gi|297831030|ref|XP_002883397.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
gi|297329237|gb|EFH59656.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
Length = 873
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 1 MAQKRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFCK 39
+ K + L GRR VF G + NMH+HWK E+VK+ K
Sbjct: 644 LGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK 682
>gi|255546121|ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
gi|223546576|gb|EEF48074.1| conserved hypothetical protein [Ricinus communis]
Length = 930
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
G+R V+ G I NMH+HWK E+VKV + Q+ A
Sbjct: 764 GKRGVYDGTIENMHLHWKYRELVKVIVRGKSFAQVKHIA 802
>gi|302759655|ref|XP_002963250.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
gi|300168518|gb|EFJ35121.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
Length = 274
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 3 QKRSSC----LPSGRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
++R+ C L G+R V+ G I +++ HW HE ++++C+ ++ AE++AR+S
Sbjct: 109 KERNRCIDDFLTIGKRGVWEGFIRDIYSHWINHETLRIYCEGYPLRKLRPMAEKVARMS 167
>gi|255551422|ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
gi|223544130|gb|EEF45655.1| conserved hypothetical protein [Ricinus communis]
Length = 742
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKV 36
K S L GRR VF GVI +H HWK E+VKV
Sbjct: 608 KMRSSLLLGRRGVFDGVIEGLHQHWKHREVVKV 640
>gi|225452572|ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1044
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVF 37
GRR +F G + NMH+HWK E+VK+
Sbjct: 628 GRRGIFDGTVENMHLHWKYRELVKII 653
>gi|296087726|emb|CBI34982.3| unnamed protein product [Vitis vinifera]
Length = 1028
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVF 37
GRR +F G + NMH+HWK E+VK+
Sbjct: 628 GRRGIFDGTVENMHLHWKYRELVKII 653
>gi|296087592|emb|CBI34848.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMH+HWK HE V+V C +I E A +ARLS
Sbjct: 182 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLS 216
>gi|147852955|emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]
Length = 1399
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVF 37
GRR +F G + NMH+HWK E+VK+
Sbjct: 1003 GRRGIFDGTVENMHLHWKYRELVKII 1028
>gi|147838476|emb|CAN69859.1| hypothetical protein VITISV_037991 [Vitis vinifera]
Length = 371
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/25 (68%), Positives = 18/25 (72%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKV 36
GRR VF GVI +H HWK EIVKV
Sbjct: 119 GRRGVFDGVIEGLHQHWKHREIVKV 143
>gi|255560940|ref|XP_002521483.1| conserved hypothetical protein [Ricinus communis]
gi|223539382|gb|EEF40973.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMH+HWK HE V+V C +I E A +ARLS
Sbjct: 185 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLS 219
>gi|359488800|ref|XP_002272412.2| PREDICTED: uncharacterized protein LOC100254349 [Vitis vinifera]
Length = 666
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMH+HWK HE V+V C +I E A +ARLS
Sbjct: 167 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLS 201
>gi|449483922|ref|XP_004156733.1| PREDICTED: uncharacterized protein LOC101226279 [Cucumis sativus]
Length = 619
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMH+HWK HE V+V C +I E A +ARLS
Sbjct: 182 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLS 216
>gi|449450187|ref|XP_004142845.1| PREDICTED: uncharacterized protein LOC101215761 [Cucumis sativus]
Length = 619
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMH+HWK HE V+V C +I E A +ARLS
Sbjct: 182 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLS 216
>gi|356513969|ref|XP_003525680.1| PREDICTED: uncharacterized protein LOC100780131 [Glycine max]
Length = 653
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMH+HWK HE V+V C +I E A +ARLS
Sbjct: 184 NMHLHWKFHETVQVCCDNFPKEKIKEMASMLARLS 218
>gi|356573355|ref|XP_003554827.1| PREDICTED: uncharacterized protein LOC100782246 [Glycine max]
Length = 653
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMH+HWK HE V+V C +I E A +ARLS
Sbjct: 184 NMHLHWKFHETVQVCCDNFPKEKIKEMASMLARLS 218
>gi|356567264|ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 712
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKVFC 38
K S L GRR +F GV+ +H HWK E+VKV
Sbjct: 571 KMQSSLLLGRRGIFDGVLEGLHQHWKHREVVKVIT 605
>gi|413917671|gb|AFW57603.1| hypothetical protein ZEAMMB73_144408 [Zea mays]
Length = 520
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMHMHWK HE V+V C +I E A + RLS
Sbjct: 169 NMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLS 203
>gi|413950005|gb|AFW82654.1| hypothetical protein ZEAMMB73_283519 [Zea mays]
Length = 645
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMHMHWK HE V+V C +I E A + RLS
Sbjct: 166 NMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLS 200
>gi|242086871|ref|XP_002439268.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
gi|241944553|gb|EES17698.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
Length = 652
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMHMHWK HE V+V C +I E A + RLS
Sbjct: 167 NMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLS 201
>gi|357134703|ref|XP_003568955.1| PREDICTED: uncharacterized protein LOC100832553 [Brachypodium
distachyon]
Length = 562
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMHMHWK HE V+V C +I E A + RLS
Sbjct: 181 NMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLS 215
>gi|449529423|ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like, partial [Cucumis sativus]
Length = 789
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFA 50
GRR V+ G + NMH+HWK E+VK+ + Q+ A
Sbjct: 660 GRRGVYDGTVENMHLHWKFRELVKIIVRGKTLQQVKHVA 698
>gi|125550822|gb|EAY96531.1| hypothetical protein OsI_18436 [Oryza sativa Indica Group]
Length = 560
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMHMHWK HE V+V C +I E A + RLS
Sbjct: 177 NMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLS 211
>gi|51038196|gb|AAT93999.1| unknow protein [Oryza sativa Japonica Group]
gi|222630175|gb|EEE62307.1| hypothetical protein OsJ_17096 [Oryza sativa Japonica Group]
Length = 560
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 23 NMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARLS 57
NMHMHWK HE V+V C +I E A + RLS
Sbjct: 177 NMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLS 211
>gi|9755828|emb|CAC01859.1| putative protein [Arabidopsis thaliana]
Length = 718
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKV 36
K +S L GRR VF GV+ +H HWK E+ KV
Sbjct: 584 KMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKV 616
>gi|186523322|ref|NP_197122.2| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
gi|374095377|sp|Q9LF10.2|CRS1_ARATH RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|332004875|gb|AED92258.1| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
Length = 720
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 4 KRSSCLPSGRRRVFGGVILNMHMHWKKHEIVKV 36
K +S L GRR VF GV+ +H HWK E+ KV
Sbjct: 586 KMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKV 618
>gi|224127512|ref|XP_002329296.1| predicted protein [Populus trichocarpa]
gi|222870750|gb|EEF07881.1| predicted protein [Populus trichocarpa]
Length = 687
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKV 36
GRR VF GV+ +H HWK E+VKV
Sbjct: 550 GRRGVFEGVMEGLHQHWKHREVVKV 574
>gi|357454755|ref|XP_003597658.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355486706|gb|AES67909.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 880
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 7 SCLPSGRRRVFGGVILNMHMHWKKHEIVKV 36
S +GRR VF GV+ +H HWK E+ KV
Sbjct: 693 STTSAGRRGVFDGVLEGLHQHWKHREVAKV 722
>gi|357521157|ref|XP_003630867.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355524889|gb|AET05343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 676
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 16 VFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEFAEEIARL 56
VF VI NMH+HW++ E+VK+ K F EE A L
Sbjct: 551 VFDSVIENMHLHWRQRELVKLITKQKSLA----FVEETASL 587
>gi|149924239|ref|ZP_01912613.1| putative DNA-binding regulatory protein [Plesiocystis pacifica
SIR-1]
gi|149814907|gb|EDM74471.1| putative DNA-binding regulatory protein [Plesiocystis pacifica
SIR-1]
Length = 307
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 43 PGQIN--EFAEEIARLSVPPPGVDVWLPSDSLGTAFPQVDIEDAGLSTSESDHEDDSLSI 100
PG +N A IAR S PP DV D G FP + IED L+ S ++ E +L
Sbjct: 43 PGDVNASRLAAAIARASPEPPSADV----DDSGQPFPGLAIEDLYLAASCAEGERAALRE 98
Query: 101 FPLK 104
F L+
Sbjct: 99 FELR 102
>gi|225441943|ref|XP_002264267.1| PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic
[Vitis vinifera]
gi|297742914|emb|CBI35781.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 14 RRVFGGVILNMHMHWKKHEIVKVFCKPSKPGQINEF 49
+ +FG + +N + WK+H ++ F KPSKPG+ + F
Sbjct: 174 QNLFGELGINDRLQWKEHSMI--FAKPSKPGEFSRF 207
>gi|330993543|ref|ZP_08317478.1| Protein-export membrane protein secD [Gluconacetobacter sp. SXCC-1]
gi|329759573|gb|EGG76082.1| Protein-export membrane protein secD [Gluconacetobacter sp. SXCC-1]
Length = 516
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 57 SVPPPGVDVWLPSDSLGT--AFPQVDIEDAGLSTSESDHEDDS 97
SVPPPGVD+ SD GT F VD++ A L+ + + + S
Sbjct: 214 SVPPPGVDLLPMSDGQGTLPVFSHVDVDGADLTNASASIDQQS 256
>gi|297807647|ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
gi|297317544|gb|EFH47966.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
Length = 727
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 GRRRVFGGVILNMHMHWKKHEIVKV 36
GRR VF G++ +H HWK E+ KV
Sbjct: 601 GRRGVFVGIMEGLHQHWKHREVAKV 625
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,806,669,374
Number of Sequences: 23463169
Number of extensions: 69087467
Number of successful extensions: 151268
Number of sequences better than 100.0: 191
Number of HSP's better than 100.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 150987
Number of HSP's gapped (non-prelim): 282
length of query: 106
length of database: 8,064,228,071
effective HSP length: 74
effective length of query: 32
effective length of database: 6,327,953,565
effective search space: 202494514080
effective search space used: 202494514080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)