BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042438
(89 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRGKV+LKRIENK NRQVTFSKR+NG+LKKA E+SVLCDAE+A ++FSP GK Y YA+D
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 61 HHTMDKIIARYRR 73
MDKI+ RY R
Sbjct: 61 SR-MDKILERYER 72
>sp|Q10CQ1|MAD14_ORYSJ MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica
GN=MADS14 PE=1 SV=2
Length = 246
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRGKV+LKRIENK NRQVTFSKR++G+LKKA E+SVLCDAE+AL+IFS GK Y YA+D
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 HHTMDKIIARYRR 73
MDKI+ RY R
Sbjct: 61 -SCMDKILERYER 72
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 62/76 (81%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRGK+E+KRIEN TNRQVTFSKR+ G+LKKA ELSVLCDAE+ L+IFS SGK + Y+S
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60
Query: 61 HHTMDKIIARYRREVG 76
+M KII RY++ G
Sbjct: 61 SSSMKKIIERYQKVSG 76
>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
Length = 268
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRGK+E+KRIENKT+RQVTFSKR+ G+LKK ELSVLCDA+I L+IFS GK + Y S
Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQ 63
Query: 61 HHTMDKIIARYRREVG-QLNSADQRSRL 87
H+M +II+RY + G L D R +L
Sbjct: 64 PHSMSQIISRYLQTTGASLPVEDNRVQL 91
>sp|P0C5B1|MAD14_ORYSI MADS-box transcription factor 14 OS=Oryza sativa subsp. indica
GN=MADS14 PE=2 SV=1
Length = 246
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRGKV+LKRIEN NRQVTFSKR++G+LKKA E+SVLCDAE+AL+IFS GK Y YA+D
Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATD 60
Query: 61 HHTMDKIIARYRR 73
MDKI+ RY R
Sbjct: 61 -SCMDKILERYER 72
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
M RGK E+KRIEN T+RQVTFSKR+NG+LKKAFELSVLCDAE+AL+IFSP GK Y ++S
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS- 59
Query: 61 HHTMDKIIARYRREVGQLNSADQRS 85
++ K + RY++ + L S +R+
Sbjct: 60 SSSIPKTVERYQKRIQDLGSNHKRN 84
>sp|P29383|AGL3_ARATH Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana
GN=AGL3 PE=2 SV=2
Length = 258
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 60/73 (82%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRGKVELKRIENK NRQVTF+KR+NG+LKKA+ELSVLCDAEIAL+IFS GK Y + S
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
Query: 61 HHTMDKIIARYRR 73
M + + +YR+
Sbjct: 61 PSGMARTVDKYRK 73
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba
GN=AGL8 PE=2 SV=1
Length = 241
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR++G+LKKA E+SVLCDAE+ALVIFS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYDR 72
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIENK NRQVTF+KR+NG+LKKA+ELSVLCDAE+AL++FS GK Y + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60
Query: 61 HHTMDKIIARYRR 73
M+K + RY+R
Sbjct: 61 -SCMNKTLERYQR 72
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG V+L+RIENK NRQVTFSKR+NG+LKKA E+SVLCDA++AL++FS GK Y ++S
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSS- 59
Query: 61 HHTMDKIIARYRR 73
H +M+ I+ RY+R
Sbjct: 60 HSSMEGILERYQR 72
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG V+L+RIENK NRQVTFSKR+NG+LKKA E+SVLCDA++AL++FS GK Y ++S
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSS- 59
Query: 61 HHTMDKIIARYRR 73
H +M+ I+ RY+R
Sbjct: 60 HSSMEGILERYQR 72
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
M RGK ++KRIEN T+RQVTFSKR+NG+LKKAFELSVLCDAE+AL++FSP GK Y +AS
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFAS- 59
Query: 61 HHTMDKIIARYR 72
+ K I RYR
Sbjct: 60 -ASTQKTIERYR 70
>sp|Q03489|AGL9_PETHY Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida
GN=FBP2 PE=1 SV=2
Length = 241
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIENK NRQVTF+KR+NG+LKKA+ELSVLCDAE+AL+IFS GK Y + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 HHTMDKIIARYRR 73
+M K + RY++
Sbjct: 61 -SSMLKTLERYQK 72
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2
SV=1
Length = 254
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G+LKKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYER 72
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G+LKKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYER 72
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
M RG+ ELKRIEN T+RQVTFSKR+NG+LKKAFELSVLCDAE+AL++FSP G+ Y +AS
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFAS- 59
Query: 61 HHTMDKIIARYR 72
++ K I RY+
Sbjct: 60 APSLQKTIDRYK 71
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
M RG+ ELKRIEN T+RQVTFSKR+NG+LKKAFELSVLCDAE+AL++FSP G+ Y +AS
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFAS- 59
Query: 61 HHTMDKIIARYR 72
++ K I RY+
Sbjct: 60 APSLQKTIDRYK 71
>sp|Q9SAR1|MADS8_ORYSJ MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica
GN=MADS8 PE=1 SV=1
Length = 248
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIENK NRQVTF+KR+NG+LKKA+ELSVLCDAE+AL+IFS GK Y + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60
Query: 61 HHTMDKIIARYRR 73
+M + + RY++
Sbjct: 61 -QSMTRTLERYQK 72
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
M RGK ++KRIEN T+RQVTFSKR+NG+LKKAFELSVLCDAE++L+IFSP GK Y +AS
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60
Query: 61 HHTMDKIIARYRR 73
+ M I RY R
Sbjct: 61 N--MQDTIDRYLR 71
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G+LKKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYER 72
>sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica
GN=MADS7 PE=1 SV=2
Length = 249
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIENK NRQVTF+KR+NG+LKKA+ELSVLCDAE+AL+IFS GK Y + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
Query: 61 HHTMDKIIARYRR 73
+M K + +Y++
Sbjct: 61 -QSMTKTLEKYQK 72
>sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza sativa subsp. indica
GN=MADS7 PE=2 SV=2
Length = 249
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIENK NRQVTF+KR+NG+LKKA+ELSVLCDAE+AL+IFS GK Y + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
Query: 61 HHTMDKIIARYRR 73
+M K + +Y++
Sbjct: 61 -QSMTKTLEKYQK 72
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR++G+LKKA E+SVLCDAE+ L++FS GK + YA+D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATD 60
Query: 61 HHTMDKIIARYRR 73
M++++ RY R
Sbjct: 61 -SCMERLLERYER 72
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana
GN=AGL8 PE=1 SV=1
Length = 242
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR++G+LKKA E+SVLCDAE+AL++FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M++I+ RY R
Sbjct: 61 -SCMERILERYDR 72
>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
GN=MADS2 PE=2 SV=1
Length = 209
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 63/78 (80%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRGK+E+KRIEN TNRQVTFSKR++GILKKA E+SVLCDAE+ +VIFS +GK Y Y S
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 61 HHTMDKIIARYRREVGQL 78
++ +I+ +Y+ G++
Sbjct: 61 KTSLSRILEKYQTNSGKI 78
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum
lycopersicum GN=TDR4 PE=2 SV=1
Length = 227
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR++G+LKKA E+SVLCDAE+ L++FS GK + YA+D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60
Query: 61 HHTMDKIIARYRR 73
M++I+ RY R
Sbjct: 61 -SCMERILERYER 72
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
M RGK E+KRIEN T+RQVTFSKR+NG+LKKAFELSVLCDAE+ALVIFSP K Y ++S
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSS- 59
Query: 61 HHTMDKIIARYRREVGQLNSADQRS 85
++ I RY+R + ++ + +R+
Sbjct: 60 -SSIAATIERYQRRIKEIGNNHKRN 83
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G++KKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYER 72
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G++KKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYER 72
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G++KKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYER 72
>sp|A2IB53|AP1_CITSI Floral homeotic protein APETALA 1 OS=Citrus sinensis GN=AP1 PE=2
SV=1
Length = 256
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G+LKKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYER 72
>sp|O22456|SEP3_ARATH Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3
PE=1 SV=1
Length = 251
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIENK NRQVTF+KR+NG+LKKA+ELSVLCDAE+AL+IFS GK Y + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS- 59
Query: 61 HHTMDKIIARYRR 73
+M + + RY++
Sbjct: 60 SSSMLRTLERYQK 72
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIENK NRQVTFSKR+NG+LKKA+ELSVLCDAE+AL+IFS GK Y + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 HHTMDKIIARYR 72
T K + RY+
Sbjct: 61 GIT--KTLERYQ 70
>sp|P29382|SEP1_ARATH Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1
PE=1 SV=2
Length = 251
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIENK NRQVTF+KR+NG+LKKA+ELSVLCDAE+AL+IFS GK Y + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 HHTMDKIIARYRR 73
+ M K + RY++
Sbjct: 61 SN-MLKTLDRYQK 72
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR++G+LKKA E+SVLCDAE+ L++FS GK + YA+D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60
Query: 61 HHTMDKIIARYRR 73
M++++ RY R
Sbjct: 61 -SCMERLLERYER 72
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 61/73 (83%), Gaps = 2/73 (2%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRGK+E+KRIEN TNRQVTF KR+NG+LKKA+ELSVLCDAE+AL++FS G+ Y YA++
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 60
Query: 61 HHTMDKIIARYRR 73
++ + RY++
Sbjct: 61 --SVKSTVERYKK 71
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRGKVELKRIENK +RQVTF+KR+NG+LKKA+ELSVLCDAE+AL+IFS G+ + +++
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 HHTMDKIIARYRREVGQLNSADQRSRL 87
M K + RYR LNS + + L
Sbjct: 61 -SCMYKTLERYRSCNYNLNSCEASAAL 86
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRGKVELKRIENK +RQVTF+KR+NG+LKKA+ELSVLCDAE+AL+IFS G+ + +++
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 HHTMDKIIARYRREVGQLNSADQRSRL 87
M K + RYR LNS + + L
Sbjct: 61 -SCMYKTLERYRSCNYNLNSCEASAAL 86
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 61/73 (83%), Gaps = 2/73 (2%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRGK+E+KRIEN TNRQVTF KR+NG+LKKA+ELSVLCDAE+AL++FS G+ Y YA++
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
Query: 61 HHTMDKIIARYRR 73
+ + I RY++
Sbjct: 61 N--IRSTIERYKK 71
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G+ KKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYER 72
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G+ KKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYER 72
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G+ KKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYER 72
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G+ KKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -SCMEKILERYER 72
>sp|O04067|AGL9_SINAL Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba
GN=AGL9 PE=2 SV=1
Length = 254
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIENK NRQVTF+KR+NG+LKKA+ELSVLCDAE+AL+IFS GK Y + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 HHTMDKIIARYRR 73
+M + + RY++
Sbjct: 61 -SSMIRTLERYQK 72
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIENK NRQVTFSKR+ G+LKKA E+SVLCDAE++L++FS GK + Y+S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 HHTMDKIIARYRR 73
M+K++ RY R
Sbjct: 61 -SCMEKVLERYER 72
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VE+KRIENK NRQVTFSKR+NG+LKKA+ELSVLCDAE+AL+IFS GK Y + S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS- 59
Query: 61 HHTMDKIIARYRR 73
++ I RY R
Sbjct: 60 -VGIESTIERYNR 71
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1
PE=2 SV=1
Length = 256
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+V+LKRIENK NRQVTFSKR+ G+ KKA E+SVLCDAE+ALV+FS GK + Y++D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 HHTMDKIIARYRR 73
M+KI+ RY R
Sbjct: 61 -PCMEKILERYER 72
>sp|Q42464|AGL9_SOLLC Agamous-like MADS-box protein AGL9 homolog OS=Solanum
lycopersicum GN=TDR5 PE=2 SV=1
Length = 224
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIE K NRQVTF+KR+NG+LKKA+ELSVLCDAE+AL+IFS GK Y + S
Sbjct: 1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 HHTMDKIIARYRR 73
+M K + RY++
Sbjct: 61 -SSMLKTLERYQK 72
>sp|O65874|MTF1_PEA MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2
SV=1
Length = 247
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKR+ENK NRQVTF+KR+NG+LKKA+ELSVLCDAE+AL++FS GK Y + S
Sbjct: 1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60
Query: 61 HHTMDKIIARYRR 73
+M K + RY++
Sbjct: 61 -SSMLKTLERYQK 72
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
Query: 1 MGRGKVELKRIENKTNRQVTFSKRKNGILKKAFELSVLCDAEIALVIFSPSGKAYHYASD 60
MGRG+VELKRIENK NRQVTFSKR+NG+LKKA+ELSVLCDAE+AL+IFS GK Y + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS- 59
Query: 61 HHTMDKIIARY 71
++K + +Y
Sbjct: 60 -AGINKTLEKY 69
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,401,260
Number of Sequences: 539616
Number of extensions: 972644
Number of successful extensions: 2914
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2740
Number of HSP's gapped (non-prelim): 186
length of query: 89
length of database: 191,569,459
effective HSP length: 59
effective length of query: 30
effective length of database: 159,732,115
effective search space: 4791963450
effective search space used: 4791963450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)