BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042442
(283 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1
PE=2 SV=1
Length = 545
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/305 (68%), Positives = 231/305 (75%), Gaps = 43/305 (14%)
Query: 1 MTILSQTPDTRGEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITND 60
M+I +Q PD G+ QSGQDVRTQNV+A +AV+NIVK+SLGPVGLD L DDIGDV ITND
Sbjct: 1 MSISAQNPDISGDRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITND 60
Query: 61 GATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSI 120
GATIL+MLE+EHPAAKVLVELAELQDREVGDGTTSVVIVAAE+LKRANDLVRNKIHPTSI
Sbjct: 61 GATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI 120
Query: 121 ISGYRVG-REAWKRFFSKLCQDKHVLE----------------VGGDNDFFANL------ 157
ISGYR+ RE+ K KL L + GD+DFFANL
Sbjct: 121 ISGYRLAMRESCKYIEEKLVTKVEKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVL 180
Query: 158 ----------------GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACL 201
GINILKAH +SA DSYLLNGYALNTGRAAQGMPLRV+P +IACL
Sbjct: 181 SVKMTNQRGEIKYPIKGINILKAHGQSARDSYLLNGYALNTGRAAQGMPLRVSPAKIACL 240
Query: 202 DFNLQKTKIQLGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGID 261
DFNLQKTK+QLGVQV+V +PRELEKI Q READM KERIEKLLKAGANV+LTTKGID
Sbjct: 241 DFNLQKTKMQLGVQVVVNDPRELEKIRQ----READMTKERIEKLLKAGANVILTTKGID 296
Query: 262 DMAQK 266
DMA K
Sbjct: 297 DMALK 301
>sp|P18279|TCPA_CRIGR T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1
PE=2 SV=1
Length = 556
Score = 296 bits (758), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/296 (53%), Positives = 203/296 (68%), Gaps = 47/296 (15%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
G+ +G+ +R+QNV+A ++ANIVKSSLGPVGLD L DDIGDV ITNDGATILK+LE+E
Sbjct: 9 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVE 68
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAW 131
HPAAKVL ELA+LQD+EVGDGTTSVVI+AAE+LK A++LV+ KIHPTS+ISGYR+ +
Sbjct: 69 HPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEA 128
Query: 132 KRFFS-------------------KLCQDKHVLEVGGDNDFFANL--------------- 157
R+ S K ++ + G DFFAN+
Sbjct: 129 VRYISENLIINTDELGRDCLINAAKTSMSSKIIGING--DFFANMVVDAVLAVKYTDLRG 186
Query: 158 -------GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKI 210
+NILKAH +S ++S L+NGYALN +QGMP R+ +IACLDF+LQKTK+
Sbjct: 187 QPRYPVNSVNILKAHGRSQVESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKM 246
Query: 211 QLGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
+LGVQV++T+P +L++I Q RE+D+ KERIEK+L GANV+LTT GIDDM K
Sbjct: 247 KLGVQVVITDPEKLDQIRQ----RESDITKERIEKILATGANVILTTGGIDDMCLK 298
>sp|Q32L40|TCPA_BOVIN T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=1 SV=1
Length = 556
Score = 295 bits (756), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/296 (53%), Positives = 203/296 (68%), Gaps = 47/296 (15%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
G+ +G+ +R+QNV+A ++ANIVKSSLGPVGLD L DDIGDV ITNDGATILK+LE+E
Sbjct: 9 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVE 68
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAW 131
HPAAKVL ELA+LQD+EVGDGTTSVVI+AAE+LK A++LV+ KIHPTS+ISGYR+ +
Sbjct: 69 HPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEA 128
Query: 132 KRFFS-------------------KLCQDKHVLEVGGDNDFFANL--------------- 157
R+ S K V+ + G DFFANL
Sbjct: 129 VRYISENLIINTDELGRDCLINAAKTSMSSKVIGING--DFFANLVVDAVLAIKYTDIRG 186
Query: 158 -------GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKI 210
IN+LKAH +S ++S L+NGYALN +QGMP R+ +IACLDF+LQKTK+
Sbjct: 187 QPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKM 246
Query: 211 QLGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
+LGVQV++T+P +L++I Q RE+D+ KERI+K+L GANV+LTT GIDDM K
Sbjct: 247 KLGVQVVITDPEKLDQIRQ----RESDITKERIQKILATGANVILTTGGIDDMCLK 298
>sp|Q9XT06|TCPA_MONDO T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1
PE=2 SV=1
Length = 557
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 203/294 (69%), Gaps = 43/294 (14%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
GE +G+ +R+QNV+A ++ANIVKSSLGPVGLD L DDIGDV ITNDGATILK+LE+E
Sbjct: 9 GERTTGESIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVE 68
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVG-REA 130
HPAAKVL ELA+LQD+EVGDGTTSVVI+AAE+LK A++LV+ KIHPTSII GYR+ +EA
Sbjct: 69 HPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEA 128
Query: 131 WKRFFSKLCQDKHVLE----------------VGGDNDFFANL----------------- 157
+ L + L +G D DFFAN+
Sbjct: 129 VRYINENLIINTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAVKYTDVKGQP 188
Query: 158 -----GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQL 212
IN+LKAH +S +S L+NGYALN A+QGMP R+ +IACLDF+LQKTK++L
Sbjct: 189 RYPVNSINVLKAHGRSQKESMLINGYALNCVVASQGMPKRIVNAKIACLDFSLQKTKMKL 248
Query: 213 GVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
GVQV++T+P +L++I + READ+ KERI+K+L GANV+LTT GIDDM K
Sbjct: 249 GVQVVITDPEKLDQIRK----READITKERIQKILATGANVILTTGGIDDMCLK 298
>sp|P17987|TCPA_HUMAN T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1
Length = 556
Score = 291 bits (746), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/294 (53%), Positives = 204/294 (69%), Gaps = 43/294 (14%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
G+ +G+ +R+QNV+A ++ANIVKSSLGPVGLD L DDIGDV ITNDGATILK+LE+E
Sbjct: 9 GDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVE 68
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVG-REA 130
HPAAKVL ELA+LQD+EVGDGTTSVVI+AAE+LK A++LV+ KIHPTS+ISGYR+ +EA
Sbjct: 69 HPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEA 128
Query: 131 WKRFFSKLCQDKHVLE----------------VGGDNDFFANL----------------- 157
+ L + L +G + DFFAN+
Sbjct: 129 VRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQP 188
Query: 158 -----GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQL 212
+NILKAH +S ++S L++GYALN +QGMP R+ +IACLDF+LQKTK++L
Sbjct: 189 RYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKL 248
Query: 213 GVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
GVQV++T+P +L++I Q RE+D+ KERI+K+L GANV+LTT GIDDM K
Sbjct: 249 GVQVVITDPEKLDQIRQ----RESDITKERIQKILATGANVILTTGGIDDMCLK 298
>sp|P11983|TCPA_MOUSE T-complex protein 1 subunit alpha OS=Mus musculus GN=Tcp1 PE=1 SV=3
Length = 556
Score = 291 bits (746), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/296 (52%), Positives = 202/296 (68%), Gaps = 47/296 (15%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
G+ +G+ VR+QNV+A ++ANIVKSS GPVGLD L DDIGDV ITNDGATILK+LE+E
Sbjct: 9 GDRSTGEAVRSQNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKLLEVE 68
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAW 131
HPAAKVL ELA+LQD+EVGDGTTSVVI+AAE+LK A++LV+ KIHPTS+ISGYR+ +
Sbjct: 69 HPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEA 128
Query: 132 KRFF-------------------SKLCQDKHVLEVGGDNDFFANL--------------- 157
R+ +K ++ + G D+FAN+
Sbjct: 129 VRYINENLIINTDELGRDCLINAAKTSMSSKIIGING--DYFANMVVDAVLAVKYTDARG 186
Query: 158 -------GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKI 210
+NILKAH +S I+S L+NGYALN +QGMP R+ +IACLDF+LQKTK+
Sbjct: 187 QPRYPVNSVNILKAHGRSQIESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKM 246
Query: 211 QLGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
+LGVQV++T+P +L++I Q RE+D+ KERI+K+L GANV+LTT GIDDM K
Sbjct: 247 KLGVQVVITDPEKLDQIRQ----RESDITKERIQKILATGANVILTTGGIDDMYLK 298
>sp|P28480|TCPA_RAT T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1
SV=1
Length = 556
Score = 290 bits (741), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/296 (52%), Positives = 202/296 (68%), Gaps = 47/296 (15%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
G+ +G+ +R+QNV+A ++ANIVKSSLGPVGLD L DDIGDV ITNDGATILK+LE+E
Sbjct: 9 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVE 68
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAW 131
HPAAKVL ELA+LQD+EVGDGTTSVVI+AAE+LK A++LV+ KIHPTS+ISGYR+ +
Sbjct: 69 HPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEA 128
Query: 132 KRFF-------------------SKLCQDKHVLEVGGDNDFFANL--------------- 157
R+ +K ++ + G DFFAN+
Sbjct: 129 VRYINENLIINTDELGRDCLINAAKTSMSSKIIGING--DFFANMVVDAVLAVKYTDIRG 186
Query: 158 -------GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKI 210
+NILKAH +S I+S L+NGYALN +QGM R+ +IACLDF+LQKTK+
Sbjct: 187 QPRYPVNSVNILKAHGRSQIESMLINGYALNCVVGSQGMLKRIVNAKIACLDFSLQKTKM 246
Query: 211 QLGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
+LGVQV++T+P +L++I Q RE+D+ KERI+K+L GANV+LTT GIDDM K
Sbjct: 247 KLGVQVVITDPEKLDQIRQ----RESDITKERIQKILATGANVILTTGGIDDMCLK 298
>sp|Q4R5G2|TCPA_MACFA T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1
PE=2 SV=1
Length = 556
Score = 288 bits (737), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 203/294 (69%), Gaps = 43/294 (14%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
G+ +G+ +R+QNV+A ++ANIVKSSLGPVGLD L DDIGDV ITNDGATILK+LE+E
Sbjct: 9 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVE 68
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVG-REA 130
HPAAKVL ELA+LQD+EVGDGTTSVVI+AAE+LK A++L + KIHPTS+ISGYR+ +EA
Sbjct: 69 HPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACKEA 128
Query: 131 WKRFFSKLCQDKHVLE----------------VGGDNDFFANL----------------- 157
+ L + L +G + DFFAN+
Sbjct: 129 VRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDTRGQP 188
Query: 158 -----GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQL 212
+NILKAH +S ++S L++GYALN +QGMP R+ +IACLDF+LQKTK++L
Sbjct: 189 RYPVNSVNILKAHGRSQMESKLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKL 248
Query: 213 GVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
GVQV++T+P +L++I Q RE+D+ KERI+K+L GANV+LTT GIDDM K
Sbjct: 249 GVQVVITDPEKLDQIRQ----RESDITKERIQKILATGANVILTTGGIDDMCLK 298
>sp|Q9W790|TCPA_PALPA T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus
GN=TCP1 PE=2 SV=1
Length = 559
Score = 288 bits (736), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 197/294 (67%), Gaps = 43/294 (14%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
GE SG VR QNV A +ANIVKSSLGPVGLD L DDIGDV ITNDGATILK+LE+E
Sbjct: 12 GERSSGDTVRNQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVE 71
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVG-REA 130
HPAAKVL ELAELQD+EVGDGTTSVVI+AAE+LK +++LV+ KIHPTSII GYR+ +EA
Sbjct: 72 HPAAKVLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIHPTSIIGGYRLACKEA 131
Query: 131 WKRFFSKLCQDKHVLE----------------VGGDNDFFANL----------------- 157
+ L + L +G D DFFA++
Sbjct: 132 VRYINENLIINTDELGRDCLINSAKTSMSSKIIGIDGDFFASMVVDAASAVKYTDQKGQA 191
Query: 158 -----GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQL 212
IN+LKAH +S +S L+NGYALN +QGM R+ +IACLDF+LQKTK++L
Sbjct: 192 RYPINSINVLKAHGRSQKESILVNGYALNCVVGSQGMTKRIVNAKIACLDFSLQKTKMKL 251
Query: 213 GVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
GVQV++T+P +L++I Q RE+D+ KERI+K+L GANV+LTT GIDDM K
Sbjct: 252 GVQVVITDPEKLDQIRQ----RESDITKERIQKILATGANVILTTGGIDDMCLK 301
>sp|P41988|TCPA_CAEEL T-complex protein 1 subunit alpha OS=Caenorhabditis elegans
GN=cct-1 PE=3 SV=2
Length = 549
Score = 280 bits (716), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 157/293 (53%), Positives = 195/293 (66%), Gaps = 42/293 (14%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
G+ +GQ +R+QNV A A+ANIVKSSLGPVGLD L DD+GDV +TNDGATILK LE+E
Sbjct: 13 GKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVE 72
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVG-REA 130
HPA KVLVELA+LQD EVGDGTTSVVIVAAE+LKRA++LV+ K+HPT+II+GYR+ +EA
Sbjct: 73 HPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEA 132
Query: 131 WK------RFFSKLCQDKHVLE----------VGGDNDFFANL----------------- 157
K F S + V+ +G D DFF L
Sbjct: 133 VKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVT 192
Query: 158 ----GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLG 213
+N+LKAH KSA +S L+ GYALN A+Q MPLRV +IACLDF+L K K+ LG
Sbjct: 193 YPINAVNVLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNAKIACLDFSLMKAKMHLG 252
Query: 214 VQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
+ V+V +P +LE I + E D+ K RI+K+LKAGANVVLTT GIDD+ K
Sbjct: 253 ISVVVEDPAKLEAIRR----EEFDITKRRIDKILKAGANVVLTTGGIDDLCLK 301
>sp|P12613|TCPA_DROME T-complex protein 1 subunit alpha OS=Drosophila melanogaster
GN=T-cp1 PE=2 SV=2
Length = 557
Score = 278 bits (712), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/305 (50%), Positives = 196/305 (64%), Gaps = 43/305 (14%)
Query: 1 MTILSQTPDTRGEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITND 60
M+ L+ G QSG VRTQNV+A +++NIVKSSLGPVGLD L DDIGDV +TND
Sbjct: 1 MSTLASPLSIAGTRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTND 60
Query: 61 GATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSI 120
GATIL++LE+EHPAAKVLVELA+LQD EVGDGTTSVVI+AAE+LK A++LV+ KIHPTSI
Sbjct: 61 GATILRLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSI 120
Query: 121 ISGYRVG-REAWKRFFSKLCQDKHVLE----------------VGGDNDFFANL------ 157
ISGYR+ +EA K L L +G D +FF+ +
Sbjct: 121 ISGYRIACKEACKYISEHLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQ 180
Query: 158 ----------------GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACL 201
IN+LKAH KSA +S L+ GYALN A+Q MP ++ +IACL
Sbjct: 181 SVKITDPRGQAAYSIKAINVLKAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIACL 240
Query: 202 DFNLQKTKIQLGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGID 261
DF+LQKTK+++GVQVL+ +P +LE I RE D+ KERI +L G NVVL + G+D
Sbjct: 241 DFSLQKTKMKMGVQVLINDPDKLEAI----RARELDITKERINMILGTGVNVVLVSGGVD 296
Query: 262 DMAQK 266
D+ K
Sbjct: 297 DLCMK 301
>sp|O94501|TCPA_SCHPO T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct1 PE=3 SV=1
Length = 556
Score = 278 bits (710), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/295 (52%), Positives = 195/295 (66%), Gaps = 43/295 (14%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
GE SG+DVR QNV+A A+AN+VKSSLGPVGLD L DDIGDV +TNDGATIL +L++E
Sbjct: 14 GEKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVE 73
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVG-REA 130
HPA KVLVELA+ QD+EVGDGTTSVVI+AAE+L+RAN+LV+NKIHPT+II+GYR+ REA
Sbjct: 74 HPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREA 133
Query: 131 WKRFFSKLCQDKHVLE----------------VGGDNDFFANL----------------- 157
K L L +G D+DFF+ +
Sbjct: 134 VKFMTDVLSCSVDSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGET 193
Query: 158 -----GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQL 212
+NILKAH KS+ +S L+ GYALN A+Q M RV +IA LD +LQKTK+ L
Sbjct: 194 RYPVKAVNILKAHGKSSRESVLVKGYALNCTIASQAMKTRVQNAKIAVLDMDLQKTKMAL 253
Query: 213 GVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQKA 267
GV V + +P +LEKI + RE + ER++K+L AGANV+LTTKGIDD+ K+
Sbjct: 254 GVHVTIDDPDQLEKIRE----REVMITLERVKKILNAGANVILTTKGIDDLCLKS 304
>sp|P12612|TCPA_YEAST T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TCP1 PE=1 SV=2
Length = 559
Score = 278 bits (710), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 198/296 (66%), Gaps = 45/296 (15%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
GE SG D+R QNV+A AVAN+VKSSLGPVGLD L DDIGD +TNDGATIL +L+++
Sbjct: 17 GEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQ 76
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAW 131
HPA K+LVELA+ QDRE+GDGTTSVVI+A+E+LKRAN+LV+NKIHPT+II+G+RV
Sbjct: 77 HPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREA 136
Query: 132 KRFFSKLCQD------KHVL-----------EVGGDNDFFANL----------------- 157
RF +++ K L +G D+DFF+N+
Sbjct: 137 IRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEI 196
Query: 158 -----GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPP--RIACLDFNLQKTKI 210
+N+LKAH KSA +S L+ GYALN A+Q MP R+A +IACLD NLQK ++
Sbjct: 197 KYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKARM 256
Query: 211 QLGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
+GVQ+ + +P +LE+I + REA +V ER++K++ AGA VVLTTKGIDD+ K
Sbjct: 257 AMGVQINIDDPEQLEQIRK----REAGIVLERVKKIIDAGAQVVLTTKGIDDLCLK 308
>sp|Q55BM4|TCPA_DICDI T-complex protein 1 subunit alpha OS=Dictyostelium discoideum
GN=tcp1 PE=2 SV=1
Length = 548
Score = 263 bits (672), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/294 (50%), Positives = 192/294 (65%), Gaps = 43/294 (14%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
G+ SG +VR QNV+A A+ANIVK+S GP+GLD L D+IG + +TNDGATIL+ ++IE
Sbjct: 10 GDRISGNEVRAQNVLAVTAIANIVKTSFGPIGLDKMLIDNIGSIVVTNDGATILQKIDIE 69
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVG-REA 130
HPAAK+LV+L+ELQD+EVGDGTT+VVI+AAE+LKRAN+LV K+HPT IISG+R+ EA
Sbjct: 70 HPAAKILVQLSELQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIISGFRLACTEA 129
Query: 131 WKRFFSKLCQDKHVL----------------EVGGDNDFFANL----------------- 157
K L L + D+DFF+ +
Sbjct: 130 IKYINETLAVKVETLPKDFIVNIAKTSMSSKTINDDSDFFSKIVIEAITRVKTIDYKGDV 189
Query: 158 -----GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQL 212
INILKAH KSA +S L+ GYALN A++GMP R+ +IA LDFNL KTK++L
Sbjct: 190 KYPINAINILKAHGKSAKESTLVEGYALNCTVASEGMPKRIQGAKIAFLDFNLAKTKMKL 249
Query: 213 GVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
G +V+VTN +LE I RE D+VKERI ++K+GANVVLTTKGIDD+ K
Sbjct: 250 GQKVVVTNVNDLEAI----RDRENDIVKERISLIIKSGANVVLTTKGIDDLCLK 299
>sp|Q94757|TCPA_SCHMA T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A
PE=2 SV=1
Length = 545
Score = 263 bits (671), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/294 (50%), Positives = 191/294 (64%), Gaps = 43/294 (14%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
GE SG+ VR QNV+A + AN VK+SLGPVGLD L DD+GDV ITNDGATILK+L++E
Sbjct: 6 GERTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVE 65
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVG-REA 130
HPAAK+LV+LA+LQD EVGDGTTSVVI+AA +LK A++L+ +HPT++I+GYR+ REA
Sbjct: 66 HPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREA 125
Query: 131 WKRFFSKLCQDKHVLEVGG----------------DNDFFANL----------------- 157
K + D + L G D D F+ +
Sbjct: 126 CKYIQEHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVSGGPKGP 185
Query: 158 -----GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQL 212
+NILKAH +S +S L++GYALN A+Q MP + +IA LDF+LQK K++L
Sbjct: 186 VYPIKAVNILKAHGRSMSESMLIDGYALNCTAASQQMPRIIKKAKIAFLDFSLQKVKMKL 245
Query: 213 GVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
GVQV+V +P +LE I Q READ+ KERI+K+L AGANV+LTT GIDD+ K
Sbjct: 246 GVQVVVKDPAQLEAIRQ----READITKERIQKILNAGANVILTTGGIDDLCMK 295
>sp|O15891|TCPA_TETPY T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3
SV=1
Length = 547
Score = 263 bits (671), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/295 (48%), Positives = 194/295 (65%), Gaps = 45/295 (15%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
GE GQDVRT NV A A+ANIVKSSLGP GLD L DD+GDV ITNDGATIL+ LE++
Sbjct: 9 GERDQGQDVRTNNVTAVMAIANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILRQLEVQ 68
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRV----- 126
HPAAKV+VEL++LQD+EVGDGTTSVVI+AAE+LKRAN+L++NK+HPTSII+G+++
Sbjct: 69 HPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKIAAKEA 128
Query: 127 ---------------GREAW----------------KRFFSKLCQDK----HVLEVGGDN 151
GREA FS++ D + + GD
Sbjct: 129 CTYIKEHLAISVEELGREALINAAKTSMSSKLIGPESNLFSQIVVDAVESVKMTNLMGDT 188
Query: 152 DFFANLGINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQ 211
+ + I+K+H +S + S L+ GY L T R Q M R+ +IA LDFNL K ++Q
Sbjct: 189 KYPIK-NVKIIKSHGQSTLQSQLIRGYVLQTQRCDQQMKTRIEKAKIALLDFNLNKFRLQ 247
Query: 212 LGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
+G+Q+LV +P+ LEKI RF +E +++KER +K+++AGANV++T+ G+DD+A K
Sbjct: 248 MGIQILVNDPKNLEKI--RF--KECEILKERCKKIIEAGANVIITSAGMDDVATK 298
>sp|Q8SSC9|TCPA_ENCCU T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi
(strain GB-M1) GN=TCP1 PE=1 SV=1
Length = 540
Score = 181 bits (458), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 160/295 (54%), Gaps = 45/295 (15%)
Query: 12 GEHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIE 71
GE SG +N A V N +K+S GP+GLD D G+V ITNDGATIL+ + I+
Sbjct: 14 GESYSGISAVEKNAKAMMKVYNAIKTSFGPLGLDKMCVDSAGEVSITNDGATILQNMLID 73
Query: 72 HPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAW 131
PAAK+LV+LA QD EVGDGTTSVV++A ++++ L+ + +HP+ ++SGY++
Sbjct: 74 DPAAKILVDLATQQDHEVGDGTTSVVLIAVSLIEKGAKLIASGVHPSVVVSGYKMAFNEC 133
Query: 132 KRFFSKLCQDKHVLEVG------------------GDNDFFANL---------------- 157
+F K K L +G +++ F +
Sbjct: 134 VQFIKK-SMSKSTLNLGSKALRNVVETSISSKVISSESEVFCGIVIDALKCIESVDENRK 192
Query: 158 ------GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQ 211
INILK S +S+L GYALN A+ M +V P+I C+DF LQK K
Sbjct: 193 NMYPIEDINILKHPGGSMKESFLHQGYALNCSLASNFMKRQVKKPKILCIDFGLQKYKNP 252
Query: 212 LGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQK 266
L V ++V +P +LE I + +E ++ + +I+ ++ +GANVVLTT+GIDDM K
Sbjct: 253 LTVSIVVDDPNKLEDIRK----KELEITRRQIKTIIDSGANVVLTTRGIDDMCTK 303
>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
GN=thsB PE=3 SV=1
Length = 502
Score = 180 bits (457), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 160/290 (55%), Gaps = 41/290 (14%)
Query: 13 EHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEH 72
+ +G+D N++A RA++ ++K++ GP G+D L D +GDV ITNDGATIL EI+H
Sbjct: 1 QRTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQH 60
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGRE--- 129
PAAK+LV++A+ QD EVGDGT VI+A E+LK A +L+ IHPT IISGYR+ E
Sbjct: 61 PAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEAL 120
Query: 130 ---------------------AWKRFFSKLCQD-------------KHVLEVGGDNDFFA 155
A SK D K V+E GD ++
Sbjct: 121 KILDQMAEPIDLNNEELLRKVARTSLTSKAVHDAREFFADIAVKAVKQVVEKRGDKNYVD 180
Query: 156 NLGINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQ 215
I I+K + + +DS L+ G L+ GMP RV +I LD L+ K ++ +
Sbjct: 181 LDNIQIIKKYGGALLDSMLVYGIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEKPEIDAE 240
Query: 216 VLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+ + +P +LEK FL +E +++ + ++K+ GANVV+ KGID++AQ
Sbjct: 241 IRINDPEQLEK----FLQQEEEILMKMVDKIASVGANVVVCQKGIDEVAQ 286
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 177 bits (450), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 154/286 (53%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R +A VKS+LGP G+D L D +GDV ITNDG TILK +++EHPAAK
Sbjct: 21 GRDAQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTILKEMDVEHPAAK 80
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVG--------- 127
+++E+A+ QD EVGDGTT+ V++A E+LK+A +L+ IHPT I GYR+
Sbjct: 81 MIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRMAANKAVEILE 140
Query: 128 ----------REAWKRFFSKLCQDKH------------------VLEVGGDNDFFANLGI 159
E K+ + KH V E D I
Sbjct: 141 SIAMDIDVEDEETLKKIAATAITGKHSEYALDHLSSLVVEAVKRVAEKVDDRYKVDEDNI 200
Query: 160 NILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
+ K S D+ L+NG ++ GMP RV +IA L L+ + + ++ +T
Sbjct: 201 KLEKRQGGSVADTKLVNGIVIDKEVVHPGMPKRVKNAKIAVLKAALEVKETETDAEIRIT 260
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L +F+ +E M+KE +++L +AGANVV KGIDD+AQ
Sbjct: 261 DPDQL----MKFIEQEEKMLKEMVDRLAEAGANVVFCQKGIDDLAQ 302
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 177 bits (449), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 164/286 (57%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R +A V+S+LGP G+D L D +GDV ITNDG TILK +++EHPAAK
Sbjct: 21 GRDAQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDGVTILKEIDVEHPAAK 80
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
+++E+A+ QD EVGDGTT+ V++A E+LKRA +L+ +IHP I +GYR E +
Sbjct: 81 MIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEKALEILN 140
Query: 137 KLC-----QDKHVLE------VGGDN-----DFFANLGINILKA--------------HV 166
++ D +L+ + G D A + +N +K ++
Sbjct: 141 EIAIPISKDDDEILKKIATTAMTGKGAEVAIDKLAEIAVNAVKMIAEESNGQVEVNTDYI 200
Query: 167 K-------SAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
K S ++ L++G L+ GMP RV +I LD L+ + ++ ++ +T
Sbjct: 201 KIEKRQGGSIEETELVDGIVLDKEVVHPGMPKRVENAKILLLDSALEVKETEIDAKIRIT 260
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L Q+F+ +E M+KE ++K++ AGANVV KGIDD+AQ
Sbjct: 261 DPEKL----QKFIEQEEAMLKEMVDKIVNAGANVVFCQKGIDDLAQ 302
>sp|P48425|THSB_THEAC Thermosome subunit beta OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsB PE=1 SV=1
Length = 543
Score = 176 bits (447), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 161/290 (55%), Gaps = 41/290 (14%)
Query: 13 EHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEH 72
+ +SG+D +N+ A A++N V+SSLGP G+D L D +GD+ ITNDG TILK +++EH
Sbjct: 15 KRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEH 74
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWK 132
PAAK++VE+++ QD VGDGTT+ VI+A +L++A L+ +HPT I GYR+ E K
Sbjct: 75 PAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAK 134
Query: 133 RFF----SKLCQDKHVL----------------------EVG----------GDNDFFAN 156
R +K+ D+ L E+ D ++ +
Sbjct: 135 RVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVD 194
Query: 157 L-GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQ 215
I ++K + D+ L+NG ++ + GMP V +IA LD L+ K +
Sbjct: 195 FDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDTN 254
Query: 216 VLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+ + +P + Q+FL +E +M++E ++K+ GANVV+T KGIDDMAQ
Sbjct: 255 LRIEDP----SMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQ 300
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 174 bits (441), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 161/286 (56%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R +A V+++LGP G+D L D +GD+ ITNDGATIL ++I+HPAAK
Sbjct: 21 GRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAK 80
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
++VE+A+ QD+E GDGTT+ V++A E+LK+A +L+ IHP+ +I GY + E +
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIVIKGYMLAAEKAQEILD 140
Query: 137 KLCQ-----DKHVL------EVGG-----DNDFFANLGINILK--AHVK----------- 167
+ + D+ VL + G + ++ A L + +K A K
Sbjct: 141 SIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVEAVKLVAEEKDGKFKVDIDNI 200
Query: 168 --------SAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
+ D+ L+ G ++ GMP RV +IA ++ L+ + + ++ +T
Sbjct: 201 KFEKKEGGAVSDTKLIRGVVIDKEVVHPGMPKRVEKAKIALINDALEVKETETDAEIRIT 260
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L Q FL +E M+KE ++K+ + GANVV KGIDD+AQ
Sbjct: 261 SPEQL----QAFLEQEEKMLKEMVDKIKEVGANVVFVQKGIDDLAQ 302
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 162/286 (56%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R +A V+++LGP G+D L D +GD+ ITNDGATIL ++I+HPAAK
Sbjct: 21 GRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAK 80
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
++VE+A+ QD+E GDGTT+ V++A E+L++A +L+ IHP+ II GY + E +
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILD 140
Query: 137 KLC-----QDKHVLEVGG-----------DNDFFANLGINILKA--------------HV 166
++ +D+ +L+ + ++ A + + +K ++
Sbjct: 141 EIAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAVKQVAEKVGETYKVDLDNI 200
Query: 167 K-------SAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
K S D+ L+ G ++ GMP RV +IA ++ L+ + + ++ +T
Sbjct: 201 KFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETETDAEIRIT 260
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L Q FL +E M++E ++K+ + GANVV KGIDD+AQ
Sbjct: 261 SPEQL----QAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQ 302
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 162/286 (56%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R +A V+++LGP G+D L D +GD+ ITNDGATIL ++I+HPAAK
Sbjct: 21 GRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAK 80
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
++VE+A+ QD+E GDGTT+ V++A E+L++A +L+ IHP+ II GY + E +
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILD 140
Query: 137 KLC-----QDKHVLEVGG-----------DNDFFANLGINILKA--------------HV 166
++ +D+ +L+ + ++ A + + +K ++
Sbjct: 141 EIAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAVKQVAEKVGETYKVDLDNI 200
Query: 167 K-------SAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
K S D+ L+ G ++ GMP RV +IA ++ L+ + + ++ +T
Sbjct: 201 KFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETETDAEIRIT 260
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L Q FL +E M++E ++K+ + GANVV KGIDD+AQ
Sbjct: 261 SPEQL----QAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQ 302
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 161/286 (56%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R +A V+++LGP G+D L D +GD+ ITNDGATIL ++I+HPAAK
Sbjct: 21 GRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAK 80
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
++VE+A+ QD+E GDGTT+ V++A E+LK+A +L+ IHP+ II GY + + +
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYTLASQKAQEILD 140
Query: 137 KLCQ-----DKHVL------EVGG-----DNDFFANLGINILK-------AHVKSAI--- 170
+ + D+ VL + G + ++ A L + +K +K I
Sbjct: 141 SIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVEAVKLVAEEKDGKLKVDIDNI 200
Query: 171 -----------DSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
D+ L+ G ++ GMP R+ +IA ++ L+ + + ++ +T
Sbjct: 201 KLEKKEGGAVRDTRLIRGVVIDKEVVHPGMPKRIENAKIALINDALEVKETETDAEIRIT 260
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L Q FL +E M+KE ++K+ + GANVV KGIDD+AQ
Sbjct: 261 SPEQL----QAFLEQEEKMLKEMVDKIKEVGANVVFVQKGIDDLAQ 302
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 157/289 (54%), Gaps = 47/289 (16%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R VA V+++LGP+G+D L D++GDV +TNDG TIL+ ++IEHPAAK
Sbjct: 23 GRDAQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVTILEEMDIEHPAAK 82
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVG--------- 127
++VE+A+ Q+ EVGDGTT+ V++A E+L +A DL++ IHPT I GYR+
Sbjct: 83 MVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYRMAVEKAEEILE 142
Query: 128 ----------REAWKRFFSKLCQDKHVLEVGGDNDFFANLGINILKA------------- 164
E K+ K V + D+ A L + +K
Sbjct: 143 EIAEEIDPDDEETLKKIAKTAMTGKGVEKA---RDYLAELVVKAVKQVAEEEDGEIVIDT 199
Query: 165 -HVK-------SAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQV 216
H+K D+ L+ G ++ R GMP RV +IA L+ ++ + + ++
Sbjct: 200 DHIKLEKKEGGGLEDTELVKGMVIDKERVHPGMPRRVENAKIALLNCPIEVKETETDAEI 259
Query: 217 LVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+T+P +L Q F+ E M+ E ++K+ + GANVV KGIDD+AQ
Sbjct: 260 RITDPEQL----QAFIEEEERMLSEMVDKIAETGANVVFCQKGIDDLAQ 304
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 171 bits (432), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 156/299 (52%), Gaps = 51/299 (17%)
Query: 14 HQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHP 73
SG+D N++A +A ++KSSLGP GLD L D GDV ITNDGATI+K +EI+HP
Sbjct: 14 RSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHP 73
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKR 133
AAK+LVE A+ QD EVGDGTTS V++A +L +A +L+ +HPT II GY+
Sbjct: 74 AAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALE 133
Query: 134 FFSKL---------------CQDKHVLEVGGDNDFFA----------------------- 155
+L Q K ++ + F A
Sbjct: 134 IIDQLSLKIDVNDLSSPTAKAQLKKIVSTTMSSKFIAGGAEEIDKIIDLVIDAITIVAEK 193
Query: 156 ------NLGINILKAHVK---SAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQ 206
N+ ++++K K S DS L++G L+ GMP RV +IA LD L+
Sbjct: 194 RPDGTYNVPLDLIKIDKKKGGSIEDSILVHGLVLDKEVVHAGMPRRVEKAKIAVLDAALE 253
Query: 207 KTKIQLGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
K ++ ++ +T+P ++ + FL EA +KE ++KL GANVV+ KGIDD+AQ
Sbjct: 254 VEKPEISAKISITSPEQI----KSFLDEEARYLKEMVDKLASIGANVVICQKGIDDVAQ 308
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 163/288 (56%), Gaps = 39/288 (13%)
Query: 13 EHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEH 72
+ + G++ + N+ A +A+A+ V+++LGP G+D L D IGD+ I+NDGATILK +++EH
Sbjct: 16 QREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEH 75
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWK 132
P AK++VE+++ QD VGDGTT+ V+++ E+LK+A L+ +HPT I +GYR+ +
Sbjct: 76 PTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEAR 135
Query: 133 RFFSKLCQ---DKHVL-----------EVGGDNDFFANL--------------------- 157
+ ++ + D L G NDF A+L
Sbjct: 136 KIIDEIAEKSTDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTA 195
Query: 158 GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVL 217
I + K + S D+ ++G ++ + MP V +IA +D L+ K ++ +V
Sbjct: 196 NIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQ 255
Query: 218 VTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+++P ++ Q FL++E + K+ +EK+ K+GANVVL KGIDD+AQ
Sbjct: 256 ISDPSKI----QDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQ 299
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 157/286 (54%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R VA ++++LGP G+D L D +GD+ ITNDGATIL ++I+HPAAK
Sbjct: 21 GRDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAK 80
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
++VE+A+ QD+E GDGTT+ V++A E+LK+A +L+ IHP+ II GY + E +
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYALAAEKAQEILE 140
Query: 137 KLCQD-----------KHVLEVGG-----DNDFFANLGINILKAHVKSAIDSY------- 173
+ ++ V + G + ++ A + + ++ + D Y
Sbjct: 141 GIAKEVSPDDVETLKKAAVTSITGKAAEEEREYLAEIAVEAVRQVAEKVGDKYKVDLDNI 200
Query: 174 --------------LLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
L+ G ++ GMP RV +IA ++ L+ + + ++ +T
Sbjct: 201 KFEKKEGASVHETQLIRGVVIDKEVVHPGMPKRVENAKIALINDALEVKETETDAEIRIT 260
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L Q FL +E M++E ++K+ + GANVV KGIDD+AQ
Sbjct: 261 SPEQL----QAFLEQEERMLREMVDKIKEVGANVVFVQKGIDDLAQ 302
>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
Length = 560
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 156/296 (52%), Gaps = 50/296 (16%)
Query: 16 SGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAA 75
+G+D N++A + +A +++SSLGP GLD L D GDV ITNDGATI+K +EI+HPAA
Sbjct: 16 TGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAA 75
Query: 76 KVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYR---------- 125
K+LVE A+ QD EVGDGTTS V++A +L++A L+ IHPT II GY+
Sbjct: 76 KLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELL 135
Query: 126 ---------------VGREAWKRFFSKLCQDKHVLEVGGDNDFF---------------- 154
V R+ ++ K + E N
Sbjct: 136 PQLGTRIDIRDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEPLPN 195
Query: 155 --ANLGINILKAHVK---SAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTK 209
N+ ++++K K S DS L+ G L+ GMP RV +IA LD L+ K
Sbjct: 196 GGYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEK 255
Query: 210 IQLGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
++ ++ +T+P ++ + FL E+ +K+ ++KL GANVV+ KGIDD+AQ
Sbjct: 256 PEISAKISITSPEQI----KAFLDEESKYLKDMVDKLASIGANVVICQKGIDDIAQ 307
>sp|Q9V2S9|THSA_SULSO Thermosome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsA PE=3 SV=2
Length = 559
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 156/296 (52%), Gaps = 50/296 (16%)
Query: 16 SGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAA 75
+G+D N++A + +A +++SSLGP GLD L D GDV ITNDGATI+K +EI+HPAA
Sbjct: 16 TGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAA 75
Query: 76 KVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYR---------- 125
K+LVE A+ QD EVGDGTTS V++A +L++A L+ IHPT II GY+
Sbjct: 76 KLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALELL 135
Query: 126 ---------------VGREAWKRFFSKLCQDKHVLEVGGDNDFF---------------- 154
V R+ ++ K + E N
Sbjct: 136 PQLGTRIDIKDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEPLPN 195
Query: 155 --ANLGINILKAHVK---SAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTK 209
N+ ++++K K S DS L+ G L+ GMP RV +IA LD L+ K
Sbjct: 196 GGYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEK 255
Query: 210 IQLGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
++ ++ +T+P ++ + FL E+ +K+ ++KL GANVV+ KGIDD+AQ
Sbjct: 256 PEISAKISITSPEQI----KAFLDEESKYLKDMVDKLASIGANVVICQKGIDDIAQ 307
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 156/281 (55%), Gaps = 39/281 (13%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G++ + N++A + +A V+++LGP G+D L D +GD+ ITNDG TIL+ ++I HPAAK
Sbjct: 20 GREAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVITNDGVTILREMDISHPAAK 79
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYR----------- 125
+LVE+A+ Q+ EVGDGTT+ VI+A E+LK A L+ +HPT I GYR
Sbjct: 80 MLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHPTIIALGYRNAALKAQEILE 139
Query: 126 ----------------------VGREAWKRFFSKLCQDKHVLEVGGDNDFFANLGINILK 163
G E K ++L D V++V D + + INI +
Sbjct: 140 EISMEASDRDTLMKVAITAMTGKGSERAKEKLAELVVD-AVMQVEEDGEIDKD-NINIQR 197
Query: 164 AHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVTNPRE 223
S +S ++NG ++ RA MP R+ RIA L + ++ ++ ++ +T+P +
Sbjct: 198 IQGASVNESRIVNGIVIDKSRADTSMPKRIEKARIALLKYPIEVKDLETDAKIRLTDPSQ 257
Query: 224 LEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMA 264
+ Q F+ +E M+++ +EK+ +GANVV KGIDD+A
Sbjct: 258 M----QAFIEQEEQMIRDMVEKIKSSGANVVFCQKGIDDLA 294
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 159/286 (55%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R +A V+++LGP G+D L D +GD+ ITNDGATIL ++I+HPAAK
Sbjct: 21 GRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAK 80
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
++VE+A+ QD+E GDGTT+ V++A E+L++A +L+ IHP+ II GY + E +
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILD 140
Query: 137 KLC-----QDKHVLEVGG-----------DNDFFANLGINILKA---------HVK---- 167
+ +D+ +L+ + ++ A + + +K HV
Sbjct: 141 SIARDVDVEDREILKKAAMTAITGKAAEEEREYLAEIAVEAVKQVAEKVGDRYHVDLDNI 200
Query: 168 --------SAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
S D+ L+ G ++ GM RV +IA ++ L+ + + ++ +T
Sbjct: 201 KFEKKEGGSVKDTQLIKGVVIDKEVVHPGMRKRVEGAKIALINEALEVKETETDAEIRIT 260
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L Q FL +E M++E ++K+ + GANVV KGIDD+AQ
Sbjct: 261 SPEQL----QAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQ 302
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 157/289 (54%), Gaps = 44/289 (15%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G++ N++A R +A ++KSSLGP GLD L D GD+ +TNDGATI+K +EI+HPAAK
Sbjct: 20 GREALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITVTNDGATIVKEMEIQHPAAK 79
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
+LVE+A+ QD EVGDGTTSVV++A +L++A L+ +HPT II GY E R
Sbjct: 80 LLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYTKAMEEALRLVD 139
Query: 137 KLC-----QDKHVLE-------------VGGDNDFFANLGINILKA-------------- 164
+ +D VL G + D ++ I+ ++
Sbjct: 140 EAAVPVEVEDDSVLRRIAETTLASKFVGTGPERDKIISMVIDAIRTVAEKRPDGGYEVDL 199
Query: 165 -HVK-------SAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQV 216
+VK S +DS L+ G L+ MP RV +I LD L+ K +L ++
Sbjct: 200 DYVKIEKKKGGSLLDSKLVRGIVLDKEVVHPAMPKRVENAKILVLDAPLEVQKPELTTKI 259
Query: 217 LVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
VT+ +LE FL E M+++ +EK+ GANVV+T KGID++AQ
Sbjct: 260 RVTDIEKLES----FLEEETRMLRDMVEKIAATGANVVITQKGIDEVAQ 304
>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
Length = 554
Score = 168 bits (425), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 156/286 (54%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G++ N+ A +A+ +KS+ GP G+D L D +GD+ ITNDGATIL ++++HP K
Sbjct: 27 GKEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPTGK 86
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
+LV++A+ QD E DGT + VI+A E+ K+A DL+ +IHPT I+SGY+ E +
Sbjct: 87 LLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQ 146
Query: 137 KLCQ-----DKHVLE-----------VGGDNDFFANL---------------------GI 159
++ Q D VL V G ++ A+L +
Sbjct: 147 EIAQPVTINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAVAQVAELRGDKWYVDLDNV 206
Query: 160 NILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
I+K H S D+ L+ G ++ GMP R+ +IA LD +L+ K +L ++ +
Sbjct: 207 QIVKKHGGSVNDTQLVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPELDAEIRIN 266
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P ++ K FL E +++KE+++K+ GANVV+ KGID++AQ
Sbjct: 267 DPTQMHK----FLEEEENILKEKVDKIAATGANVVICQKGIDEVAQ 308
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 167 bits (424), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 156/286 (54%), Gaps = 47/286 (16%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A + +A V+++LGP G+D L D +GD+ +TNDG TILK ++IEHPAAK
Sbjct: 20 GRDAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVVTNDGVTILKEMDIEHPAAK 79
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
+LVE+A+ Q+ EVGDGTT+ VI+A E+LK+A +L+ +IHPT I GYR E +
Sbjct: 80 MLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHPTIIAMGYRQAAEKAQEILD 139
Query: 137 KLCQDKHVLEVGGDNDFFANLGINIL------------------------------KAHV 166
+ D D D + + + K H+
Sbjct: 140 DIAID------ASDRDTLMKVAMTAMTGKGTEKAREPLAELIVDAVKQVEEDGEVEKDHI 193
Query: 167 K------SAI-DSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
K +A+ DS L+ G ++ R GMP +V +IA L+ ++ + ++ ++ +T
Sbjct: 194 KIEKKEGAAVDDSTLVQGVIIDKERVHPGMPKKVENAKIALLNCPIEVKETEVDAEIRIT 253
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P ++ Q F+ +E M+++ + ++ GANV+ KGIDD+AQ
Sbjct: 254 DPSQM----QAFIEQEEQMIRDMVNSIVDTGANVLFCQKGIDDLAQ 295
>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct1 PE=1 SV=1
Length = 560
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 155/285 (54%), Gaps = 41/285 (14%)
Query: 16 SGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAA 75
SGQD ++ N+ A +AVA V+++LGP G+D L D G V +TNDG TILK ++I+HPAA
Sbjct: 22 SGQDAQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGGQVVVTNDGVTILKEMDIDHPAA 81
Query: 76 KVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRV--------- 126
++VE++E Q+ EVGDGTT+ VI A E+L +A DL+ + +H T+I GYR
Sbjct: 82 NMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDVHATTIAQGYRQAAEKAKEVL 141
Query: 127 --------------------------GREAWKRFFSKLCQDKHVLEVGGDNDFFANLGIN 160
G E+ K S+L D VL V D+ N ++
Sbjct: 142 EDNAIEVTEDDRETLTKIAATAMTGKGAESAKDLLSELVVDA-VLAVKDDDGIDTN-NVS 199
Query: 161 ILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVTN 220
I K + +S L+ G ++ R + MP V IA LD L+ + ++ +V VT+
Sbjct: 200 IEKVVGGTIDNSELVEGVIVDKERVDENMPYAVEDANIAILDDALEVRETEIDAEVNVTD 259
Query: 221 PRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
P +L Q+FL +E +KE +++L++ GA+ V GIDDMAQ
Sbjct: 260 PDQL----QQFLDQEEKQLKEMVDQLVEVGADAVFVGDGIDDMAQ 300
>sp|Q9HN70|THSA_HALSA Thermosome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=thsA PE=3 SV=2
Length = 562
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 152/283 (53%), Gaps = 37/283 (13%)
Query: 16 SGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAA 75
SG+D ++ N+ A +AVA V+++LGP G+D L D G+V +TNDG TILK ++IEHPAA
Sbjct: 21 SGEDAQSMNITAGKAVAESVRTTLGPKGMDKMLVDSSGEVVVTNDGVTILKEMDIEHPAA 80
Query: 76 KVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFF 135
++VE+AE Q+ EVGDGTT+ V+V+ E+L A L+ IH T++ GYR E K
Sbjct: 81 NMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHATTLAQGYRQAAEKAKELL 140
Query: 136 SKL-----CQDKHVLE---------VGGDN--DFFANLGINILKAHVK------------ 167
D LE G +N ++L + +++
Sbjct: 141 DDAAIDVSADDTETLEKIAATAMTGKGAENAKGVLSDLVVRAVQSVADDNDVDTDNVKVE 200
Query: 168 ----SAID-SYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVTNPR 222
AI+ S L+ G ++ R ++ MP V IA +D L+ + ++ +V VT+P
Sbjct: 201 KVTGGAIENSELIEGVIVDKERVSENMPYAVEDANIALVDDGLEVQETEIDTEVNVTDPD 260
Query: 223 ELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+L Q FL +E + +KE ++ L AGANVV GIDDMAQ
Sbjct: 261 QL----QNFLDQEEEQLKEMVDALKDAGANVVFADSGIDDMAQ 299
>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1
Length = 552
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 154/286 (53%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G++ N+ A +A+ +KS+ GP G+D D +GD+ ITNDGATIL ++++HP K
Sbjct: 27 GKEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITITNDGATILDKMDLQHPTGK 86
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
+LV++A+ QD E DGT + VI+A E+ K+A DL+ +IHPT I+SGY+ E +
Sbjct: 87 LLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQ 146
Query: 137 KLCQ-----DKHVLE-----------VGGDNDFFANL---------------------GI 159
+ Q D VL V G ++ A+L +
Sbjct: 147 DIAQPVSINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAVAQVAELRGDKWYVDLDNV 206
Query: 160 NILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
I+K H S D+ L+ G ++ GMP R+ +IA LD +L+ K +L ++ +
Sbjct: 207 QIVKKHGGSINDTQLVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPELDAEIRIN 266
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P ++ K FL E +++KE+++K+ GANVV+ KGID++AQ
Sbjct: 267 DPTQMHK----FLEEEENILKEKVDKIAATGANVVICQKGIDEVAQ 308
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 164 bits (416), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 156/283 (55%), Gaps = 38/283 (13%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R + V+S+LGP G+D L DD+GD+ +TNDG TILK + +EHPAAK
Sbjct: 19 GRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGVTILKEMSVEHPAAK 78
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
+L+E+A+ Q++EVGDGTT+ V++A E+L++A +L+ +HPT +I GY++ + +
Sbjct: 79 MLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQEVLK 138
Query: 137 KL-----CQDKHVLEV--------GGDNDFFANLG---------------------INIL 162
++ DK +L G LG I I
Sbjct: 139 EIAMDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTAVVDESGKVDKDLIKIE 198
Query: 163 KAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVTNPR 222
K S ++ L+NG ++ R + MP ++ +IA L+ ++ + + ++ +T+P
Sbjct: 199 KKEGASVDETELINGVLIDKERVSPQMPKKIENAKIALLNCPIEVKETETDAEIRITDPT 258
Query: 223 ELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+L F+ +E M+K+ ++ + +GANV+ KGIDD+AQ
Sbjct: 259 KL----MEFIEQEEKMLKDMVDTIKASGANVLFCQKGIDDLAQ 297
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 160/284 (56%), Gaps = 39/284 (13%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R +A V+++LGP G+D L D++GD+ +TNDG TILK + +EHPAAK
Sbjct: 20 GRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILKEMSVEHPAAK 79
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGR----EAWK 132
+L+E+A+ Q++EVGDGTT+ V++A E+L++A +L+ IHP+ II+GY + R E K
Sbjct: 80 MLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNKAVEELK 139
Query: 133 RFFSKL-CQDKHVLE------VGGDN-----DFFANLGINILKAHVKSAI---------- 170
++ +D +L+ + G + A + + ++A V
Sbjct: 140 SIAKEVKPEDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRAVVDEETGKVDKDLIKV 199
Query: 171 ---------DSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVTNP 221
++ L+ G ++ R MP +V +IA L+ ++ + + ++ +T+P
Sbjct: 200 EKKEGAPIEETKLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETETDAEIRITDP 259
Query: 222 RELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+L F+ +E M+K+ +EK+ GANVV KGIDD+AQ
Sbjct: 260 AKL----MEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQ 299
>sp|Q9V2T4|THSB_SULAC Thermosome subunit beta OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsB PE=3 SV=2
Length = 553
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 158/286 (55%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G++ N+ A +AV +K++ GP G+D L D +GD+ ITNDGATIL ++++HPAAK
Sbjct: 28 GKEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAK 87
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
+LV++A+ QD E DGT + VI + E++K+A +L+ +IHPT I+SGY+ E +
Sbjct: 88 LLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGYKKAEEMAIKTIE 147
Query: 137 KLC-----QDKHVLE-----------VGGDNDFFANL---------------------GI 159
++ D +L V G + A++ +
Sbjct: 148 EISTKVSVNDTEILRKVALTSLSSKAVAGAREHLADIVVKAITQVAELRGDKWYVDLDNV 207
Query: 160 NILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
I+K H S D+ ++ G ++ GMP RV +IA LD +L+ K +L ++ +
Sbjct: 208 QIVKKHGGSINDTQIVYGIIVDKEVVHPGMPKRVENAKIALLDASLEVEKPELDAEIRIN 267
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +++K FL E +++KE+++K+ + GANVV+ KGID++AQ
Sbjct: 268 DPTQMKK----FLDEEENILKEKVDKIAQTGANVVICQKGIDEVAQ 309
>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
Length = 559
Score = 161 bits (407), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 158/299 (52%), Gaps = 50/299 (16%)
Query: 13 EHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEH 72
+ SG+D N++A +A ++KSSLGP GLD L D GDV ITNDGATI+K +EI+H
Sbjct: 14 QRSSGRDALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQH 73
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWK 132
PAAK+LVE A+ QD EVGDGTTS V++A +L +A+DL+ IHPT II GY+
Sbjct: 74 PAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYKKALNKSL 133
Query: 133 RFFSKLC---------------QDKHVLEVGGDNDFFA---------------------- 155
+L Q K ++ + F A
Sbjct: 134 EIIDQLATKIDVSNLNSLATRDQLKKIVYTTMSSKFIAGGEEMDKIMNMVIDAVSIVAEP 193
Query: 156 ------NLGINILKAHVK---SAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQ 206
N+ ++++K K S DS L++G L+ GMP RV +IA LD L+
Sbjct: 194 LPEGGYNVPLDLIKIDKKKGGSIEDSMLVHGLVLDKEVVHPGMPRRVEKAKIAVLDAALE 253
Query: 207 KTKIQLGVQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
K ++ ++ +T+P ++ + FL EA +K+ ++KL GANVV+ KGIDD+AQ
Sbjct: 254 VEKPEISAKISITSPEQI----KAFLDEEAKYLKDMVDKLASIGANVVICQKGIDDVAQ 308
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 160 bits (406), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 159/289 (55%), Gaps = 47/289 (16%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G++ N++A RA+A I+K++ GP G+D L D +GD+ ITN+GATIL +++ HPAAK
Sbjct: 28 GREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATILDKMDVAHPAAK 87
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKR--- 133
+LV++++ Q+ E GDGT + VI A E+LK A L+ IHPT I+ GY +EA ++
Sbjct: 88 MLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGY---KEALRKASE 144
Query: 134 -----------------------------------FFSKLCQD--KHVLEVGGDNDFFAN 156
+F++L + + V E GD +
Sbjct: 145 VIESIAEPVSYDDVEKLKLIAKTSLNSKAVAEARDYFAELAVEAVRTVAERRGDRWYVDL 204
Query: 157 LGINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQV 216
I I+K H S D+ L+ G L+ MP RV RIA LD L+ K ++ +++
Sbjct: 205 NNIQIVKKHGGSLRDTRLVRGIVLDKEVVHPDMPRRVENARIALLDTPLEIEKPEIDLEI 264
Query: 217 LVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+T+P +++ + + ++ +++E+IEK+ GANVV+T KGIDD+AQ
Sbjct: 265 SITSPEQIKALYE----KQERILQEKIEKIAATGANVVITQKGIDDVAQ 309
>sp|O24731|THSA_THEK8 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA
PE=3 SV=1
Length = 549
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 156/286 (54%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R +A V+++LGP G+D L D +GD+ +TNDGATIL ++++HPAAK
Sbjct: 21 GRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAK 80
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
++VE+A+ QD+E GDGTT+ V++A E+L++A +L+ IHP+ II GY + E +
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILE 140
Query: 137 KLC-----QDKHVL------EVGGDN-----DFFANLGINILKAHVKSAIDSYLLN---- 176
++ D+ L + G N + A L ++ +K + Y+++
Sbjct: 141 EIAIKVNPDDEETLLRIAMTSITGKNAESHKELLAKLAVDAVKQVAEKKDGKYVVDLDNI 200
Query: 177 ------GYALNTGRAAQG-----------MPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
G + +G MP RV +IA ++ L+ K + ++ +T
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEGAKIALINEALEVKKTETDAKINIT 260
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L FL +E M+K+ ++ + + GANVV KGIDD+AQ
Sbjct: 261 SPDQL----MSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQ 302
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 155/286 (54%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R +A V+++LGP G+D L D +GD+ +TNDGATIL ++++HPAAK
Sbjct: 21 GRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAK 80
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
++VE+A+ QD+E GDGTT+ V++A E+L++A +L+ IHP+ II GY + E +
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILD 140
Query: 137 KLC-----QDKHVL------EVGGDN-----DFFANLGINILKAHVKSAIDSYLLN---- 176
++ D+ L + G N + A L + +K + Y+++
Sbjct: 141 EIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNI 200
Query: 177 ------GYALNTGRAAQG-----------MPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
G + +G MP RV +IA ++ L+ K + ++ +T
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINIT 260
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L FL +E M+K+ ++ + + GANVV KGIDD+AQ
Sbjct: 261 SPDQL----MSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQ 302
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 155/286 (54%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G+D + N++A R +A V+++LGP G+D L D +GD+ +TNDGATIL ++++HPAAK
Sbjct: 21 GRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAK 80
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
++VE+A+ QD+E GDGTT+ V++A E+L++A +L+ IHP+ II GY + E +
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILD 140
Query: 137 KLC-----QDKHVL------EVGGDN-----DFFANLGINILKAHVKSAIDSYLLN---- 176
++ D+ L + G N + A L + +K + Y+++
Sbjct: 141 EIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNI 200
Query: 177 ------GYALNTGRAAQG-----------MPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
G + +G MP RV +IA ++ L+ K + ++ +T
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINIT 260
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L FL +E M+K+ ++ + + GANVV KGIDD+AQ
Sbjct: 261 SPDQL----MSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQ 302
>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
Length = 552
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 155/286 (54%), Gaps = 41/286 (14%)
Query: 17 GQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAK 76
G++ N+ A +AV +KS+ GP G+D L D +GD+ ITNDGATIL ++++HPAAK
Sbjct: 28 GKEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAK 87
Query: 77 VLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFS 136
+LV++A+ QD E DGT + VI+A E++K+A +L+ +IHPT I+SG++ E +
Sbjct: 88 LLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPTIIVSGFKKAEEQALKTIE 147
Query: 137 KLCQ-----DKHVLE-----------VGGDNDFFANL---------------------GI 159
++ Q D +L+ V G ++ A++ I
Sbjct: 148 EIAQKVSVNDMDILKKVAMTSLNSKAVAGAREYLADIVAKAVTQVAELRGDRWYVDLDNI 207
Query: 160 NILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
I+K H S D+ ++ G ++ GMP RV +IA LD +L+ K +L ++ +
Sbjct: 208 QIVKKHGGSINDTQIIYGIVVDKEVVHPGMPKRVENAKIALLDASLEVEKPELDAEIRIN 267
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +++K + + + V +K+ GANVV+ KGID++AQ
Sbjct: 268 DPTQMKKFLEEEENLLKEKV----DKIAATGANVVICQKGIDEVAQ 309
>sp|O30560|THS2_HALVD Thermosome subunit 2 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct2 PE=1 SV=1
Length = 557
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 156/286 (54%), Gaps = 42/286 (14%)
Query: 18 QDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEHPAAKV 77
+D + N+ A RAVA V+S+LGP G+D L D +GDV ITNDG TILK ++I++P A++
Sbjct: 24 RDAQEYNIRAARAVAEAVRSTLGPKGMDKMLVDSMGDVTITNDGVTILKEMDIDNPTAEM 83
Query: 78 LVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGREAWKRFFSK 137
+VE+AE Q+ E GDGTT+ V +A E+LK A DL+ IHPT+II G+ + E +
Sbjct: 84 IVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIRGFNLASEKAREEIDD 143
Query: 138 LCQ-----DKHVLEVGGDN-----------DFFANLGINILK---------AHV------ 166
+ + D+ +L+ + + A+L + ++ +HV
Sbjct: 144 IAERVDPDDEELLKKVAETSMTGKSSELNKELLADLIVRAVRQVTVEANDGSHVVDLENV 203
Query: 167 -------KSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLGVQVLVT 219
+SA +S LL G ++ MP++ + L+ ++ + + V +
Sbjct: 204 SIETQTGRSASESELLTGAVIDKDPVHDDMPVQFDEADVLLLNEPVEVEETDIDTNVSIE 263
Query: 220 NPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMAQ 265
+P +L Q+FL +E +K+++++++ +GA+VV KGIDD+AQ
Sbjct: 264 SPDQL----QKFLDQEEAQLKQKVDQIVDSGADVVFCQKGIDDLAQ 305
>sp|Q9V2T7|THSG_SULSO Thermosome subunit gamma OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsC PE=3 SV=1
Length = 535
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 149/291 (51%), Gaps = 44/291 (15%)
Query: 13 EHQSGQDVRTQNVVARRAVANIVKSSLGPVGLDICLFDDIGDVKITNDGATILKMLEIEH 72
+ +G +V N+ + + ++KSSLGP GLD L + DV ITNDGATI+K +E++H
Sbjct: 10 QRSTGNEVILNNIAVAKILLEMLKSSLGPKGLDKMLVEG-QDVTITNDGATIVKNMEVQH 68
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYR------- 125
P AK+L+E A+ D EVGDGTTSVV++A +L++A DL+ KIHPT II GYR
Sbjct: 69 PTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALNSSL 128
Query: 126 -----------------VGREAWKRFFSKLCQDKHVLE------------VGGDNDFFAN 156
V + SK +H LE V D +
Sbjct: 129 ELLKNIADKISPEDRKIVHDLVYTTLSSKFFSTEHTLEKIINLVIDASLAVLDKRDGSYD 188
Query: 157 L---GINILKAHVKSAIDSYLLNGYALNTGRAAQGMPLRVAPPRIACLDFNLQKTKIQLG 213
L I I+K + DS L+NG ++ + MP RV ++ DF L+ K ++
Sbjct: 189 LDIKNIKIVKVNGGEFDDSELINGIVVDKEPTNENMPKRVENVKVMLADFPLKLEKTEIS 248
Query: 214 VQVLVTNPRELEKICQRFLHREADMVKERIEKLLKAGANVVLTTKGIDDMA 264
+++ +++P ++ + +L + VK+ ++K+ G + +T K ID++A
Sbjct: 249 MKLGISDPTQI----KGYLDEQTAYVKQMVDKIKAMGVKLFITQKDIDEIA 295
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,910,205
Number of Sequences: 539616
Number of extensions: 3979331
Number of successful extensions: 14306
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 11736
Number of HSP's gapped (non-prelim): 1428
length of query: 283
length of database: 191,569,459
effective HSP length: 116
effective length of query: 167
effective length of database: 128,974,003
effective search space: 21538658501
effective search space used: 21538658501
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)