BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042445
(246 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 2/211 (0%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91
I A++ + ++A+E+YG + F + + M + VP+L+ G ++ R +VPG RLGW+
Sbjct: 193 ILAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWI 252
Query: 92 VTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETAD 151
+ D I + I D + P T +QGA+ IL++T +EF+ + L+ AD
Sbjct: 253 LIHDRRDIFGNE-IRDGLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNAD 311
Query: 152 KCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV 211
C L IP + P +P G+M++MV + +D+EF +L E+SV LP
Sbjct: 312 LCYGALSAIPGLQ-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPATCF 370
Query: 212 GLKDWLRITFAVEPSALENGLGRMKAFYDRH 242
++ R+ V + R++ F ++H
Sbjct: 371 EYPNFFRVVITVPEVMMLEACSRIQEFCEQH 401
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91
I A + + ++A+E+YG + F + + + + VP+L+ G ++KR +VPG RLGW+
Sbjct: 216 ILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWI 275
Query: 92 VTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETAD 151
+ D I + I D + P T +QGA+ IL +T EF+ + L+ AD
Sbjct: 276 LIHDRRDIFGNE-IRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNAD 334
Query: 152 KCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV 211
C L IP + P +P G+M++MV + +D+EF +L E+SV LP
Sbjct: 335 LCYGALAAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCF 393
Query: 212 GLKDWLRITFAVEPSALENGLGRMKAFYDRH 242
+++R+ V + R++ F ++H
Sbjct: 394 EYPNFIRVVITVPEVMMLEACSRIQEFCEQH 424
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 9/217 (4%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFG----NTPFVSMGVFGSIVPLLTLGSISKRGIVPGLR 87
I A++L + + ++E+Y + F N F S+ F + VP + LG + +VPG R
Sbjct: 202 IVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWR 261
Query: 88 LGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILR 147
LGWL+ DP+G ++ +K + P T +Q A+ + L T +E +I+ +
Sbjct: 262 LGWLLYVDPHG--NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIE 319
Query: 148 ETADKCCDRLKEIPCI-TCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL 206
E+A + + E CI P P G+M++M +++ I +D+EF KL +EE+V VL
Sbjct: 320 ESAMYLYNHIGE--CIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVL 377
Query: 207 PGITVGLKDWLRITFAVEPSALENGLGRMKAFYDRHA 243
PG + R+T + R+KAF RHA
Sbjct: 378 PGTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQRHA 414
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG--SIVPLLTLGSISKRGIVPGLRLG 89
IA+ A + G+ V+++E+Y + + + +S+G + + +K + G R+G
Sbjct: 188 IAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVG 247
Query: 90 WLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRET 149
+L P + + KI + +S+ TF Q E + ++ +++ E
Sbjct: 248 FLAGPVPL-------VKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAER 299
Query: 150 ADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI 209
D L +P + CP KP+G+ ++ S+ + S ++F +L + V +PG
Sbjct: 300 RRYMLDALNAMPGLECP-KPDGAFYMFP----SIAKTGRSSLDFCSELLDQHQVATVPGA 354
Query: 210 TVGLKDWLRITFAVEPSALENGLGRMKAF 238
G D +R+++A + ++ G+ R++ F
Sbjct: 355 AFGADDCIRLSYATDLDTIKRGMERLEKF 383
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 10/209 (4%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91
I A + I VI++E+Y + + +S G VP++ + +SK G RLG++
Sbjct: 199 ILNIAGEYEIPVISDEIYDLMTYEGE-HISPGSLTKDVPVIVMNGLSKVYFATGWRLGYM 257
Query: 92 VTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETAD 151
DP L S + ++I I P T Q A L ++ + + L+E D
Sbjct: 258 YFVDPENKL--SEVREAIDRLARIRLCPNTPAQFAAIAGL-TGPMDYLKEYMKKLKERRD 314
Query: 152 KCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV 211
RL EIP I+ KP+G+ ++ K+ + +D EF L + V+ + G
Sbjct: 315 YIYKRLNEIPGIST-TKPQGAFYIFPKIEVGPWK---NDKEFVLDVLHNAHVLFVHGSGF 370
Query: 212 GL--KDWLRITFAVEPSALENGLGRMKAF 238
G R F LE + R + F
Sbjct: 371 GEYGAGHFRAVFLPPIEILEEAMDRFEKF 399
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 34 ETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVT 93
E A + +++ + Y L + P + F ++ LG+ SK + PG R+GW V
Sbjct: 210 ELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKI-LAPGFRIGW-VA 267
Query: 94 SDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTE-EEFFSKIIDILRETADK 152
+ P+ I + SI + N TF Q + +E +E KII+ + D
Sbjct: 268 AHPHLIRKMEIAKQSIDLCTN------TFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDA 321
Query: 153 CCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG--- 208
+ L+E +P KPEG MFV V +L EGI++ + +AK V +PG
Sbjct: 322 MLEALEEYMPEGVEWTKPEGGMFVRV----TLPEGIDTKLMMERAVAK--GVAYVPGEAF 375
Query: 209 -ITVGLKDWLRITFAVEP-SALENGLGRM 235
+ K+ +R+ F P + G+ R+
Sbjct: 376 FVHRDKKNTMRLNFTYVPEETIREGVRRL 404
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 38/192 (19%)
Query: 32 IAETAKKLGIMVIANEVYGHLAF--GNTP-FVSMGVFGSIVPLLTLGSISKRGIVPGLRL 88
I E A+K ++I ++ Y L F G P F+SM V G ++ + I I GLR+
Sbjct: 216 IYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKI----ISSGLRI 271
Query: 89 GWLVTSDPNGILQDSGIVDSIKIFLNISS-DPATFIQGAVPQILEKTEEE---------- 137
G+L P +++ + + + +S+ P+TF Q + Q+L + EE
Sbjct: 272 GFLTGPKP--------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVI 323
Query: 138 -FFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALK 196
F+S D + ADK L E P MF+ +K ++GIN E +
Sbjct: 324 DFYSNQKDAILAAADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEE 372
Query: 197 LAKEESVIVLPG 208
A + V++LPG
Sbjct: 373 KAVKMGVLMLPG 384
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 38/192 (19%)
Query: 32 IAETAKKLGIMVIANEVYGHLAF--GNTP-FVSMGVFGSIVPLLTLGSISKRGIVPGLRL 88
I E A+K ++I ++ Y L F G P F+SM V G ++ + I I GLR+
Sbjct: 216 IYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKI----ISSGLRI 271
Query: 89 GWLVTSDPNGILQDSGIVDSIKIFLNISS-DPATFIQGAVPQILEKTEEE---------- 137
G+L P +++ + + + +S+ P+TF Q + Q+L + EE
Sbjct: 272 GFLTGPKP--------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVI 323
Query: 138 -FFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALK 196
F+S D + ADK L E P MF+ +K ++GIN E +
Sbjct: 324 DFYSNQKDAILAAADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEE 372
Query: 197 LAKEESVIVLPG 208
A + V++LPG
Sbjct: 373 KAVKMGVLMLPG 384
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 36 AKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVTSD 95
AKK +I++EVY L + + + V ++ + SK + G R+G+L++S+
Sbjct: 203 AKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE 262
Query: 96 PNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155
KI + +S T Q A + LE S ++ +E + +
Sbjct: 263 KVATAVS-------KIQSHTTSCINTVAQYAALKALEVDN----SYMVQTFKERKNFVVE 311
Query: 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKD 215
RLK++ +PEG+ ++ K+ D++F +L +E+ V ++PG
Sbjct: 312 RLKKMGVKFV--EPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALVPGSAFLKPG 362
Query: 216 WLRITFAVEPSALENGLGRMKAF 238
++R++FA L L R++ F
Sbjct: 363 FVRLSFATSIERLTEALDRIEDF 385
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 38/192 (19%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGN---TPFVSMGVFGSIVPLLTLGSISKRGIVPGLRL 88
I E A+K ++I ++ Y L F F+SM V G ++ + I I GLR+
Sbjct: 216 IYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRI 271
Query: 89 GWLVTSDPNGILQDSGIVDSIKIFLNISS-DPATFIQGAVPQILEKTEEE---------- 137
G+L P +++ + + + +S+ P+TF Q + Q+L + EE
Sbjct: 272 GFLTGPKP--------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVI 323
Query: 138 -FFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALK 196
F+S D + ADK L E P MF+ +K ++GIN E +
Sbjct: 324 DFYSNQKDAILAAADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEE 372
Query: 197 LAKEESVIVLPG 208
A + V++LPG
Sbjct: 373 KAVKMGVLMLPG 384
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 38/192 (19%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGN---TPFVSMGVFGSIVPLLTLGSISKRGIVPGLRL 88
I E A+K ++I ++ Y L F F+SM V G ++ + I I GLR+
Sbjct: 216 IYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRI 271
Query: 89 GWLVTSDPNGILQDSGIVDSIKIFLNISS-DPATFIQGAVPQILEKTEEE---------- 137
G+L P +++ + + + +S+ P+TF Q + Q+L + EE
Sbjct: 272 GFLTGPKP--------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVI 323
Query: 138 -FFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALK 196
F+S D + ADK L E P MF+ +K ++GIN E +
Sbjct: 324 DFYSNQKDAILAAADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEE 372
Query: 197 LAKEESVIVLPG 208
A + V++LPG
Sbjct: 373 KAVKMGVLMLPG 384
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 38/192 (19%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGN---TPFVSMGVFGSIVPLLTLGSISKRGIVPGLRL 88
I E A+K ++I ++ Y L F F+SM V G ++ + I I GLR+
Sbjct: 216 IYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXI----ISSGLRI 271
Query: 89 GWLVTSDPNGILQDSGIVDSIKIFLNISS-DPATFIQGAVPQILEKTEEE---------- 137
G+L P +++ + + + +S+ P+TF Q + Q+L + EE
Sbjct: 272 GFLTGPKP--------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVI 323
Query: 138 -FFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALK 196
F+S D + ADK L E P MF+ +K ++GIN E +
Sbjct: 324 DFYSNQKDAILAAADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEE 372
Query: 197 LAKEESVIVLPG 208
A + V++LPG
Sbjct: 373 KAVKMGVLMLPG 384
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 38/192 (19%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGN---TPFVSMGVFGSIVPLLTLGSISKRGIVPGLRL 88
I E A+K ++I ++ Y L F F+SM V G ++ + I I GLR+
Sbjct: 218 IYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXI----ISSGLRI 273
Query: 89 GWLVTSDPNGILQDSGIVDSIKIFLNISS-DPATFIQGAVPQILEKTEEE---------- 137
G+L P +++ + + + +S+ P+TF Q + Q+L + EE
Sbjct: 274 GFLTGPKP--------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVI 325
Query: 138 -FFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALK 196
F+S D + ADK L E P MF+ +K ++GIN E +
Sbjct: 326 DFYSNQKDAILAAADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEE 374
Query: 197 LAKEESVIVLPG 208
A + V++LPG
Sbjct: 375 KAVKMGVLMLPG 386
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 38/192 (19%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGN---TPFVSMGVFGSIVPLLTLGSISKRGIVPGLRL 88
I E A+K ++I ++ Y L F F+SM V G ++ + I I GLR+
Sbjct: 216 IYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRI 271
Query: 89 GWLVTSDPNGILQDSGIVDSIKIFLNISS-DPATFIQGAVPQILEKTEEE---------- 137
G+L P +++ + + + +S+ P+TF Q + Q+L + EE
Sbjct: 272 GFLTGPKP--------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVI 323
Query: 138 -FFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALK 196
F+S D + ADK L E P MF+ +K ++GIN E +
Sbjct: 324 DFYSNQKDAILAAADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEE 372
Query: 197 LAKEESVIVLPG 208
A + V++LPG
Sbjct: 373 KAVKMGVLMLPG 384
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91
+ E A ++G ++++EVY + + P + + V+ + + S+S +PG+R+GW+
Sbjct: 179 LVEIASEVGAYILSDEVYRSFSELDVPSI-IEVYDKGI---AVNSLSXTYSLPGIRIGWV 234
Query: 92 VTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETAD 151
+ + D ++ + + + A V Q+ +E + IL E
Sbjct: 235 AA--------NHQVTDILRDYRDYTXICAGVFDDLVAQLALAHYQEILERNRHILEENLA 286
Query: 152 KCCDRLKEIPCITCPKKPEGSM-FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT 210
++E P ++ + S FV + ++ +F L+L +E V+++PG
Sbjct: 287 ILDQWIEEEPLVSYIRPAVVSTSFVKIAVD-------XPXEDFCLQLLQEHGVLLVPGNR 339
Query: 211 VGLKDWLRITFAVEPSALENGLGRMKAFYDR 241
++R+ FA E L GL ++ F R
Sbjct: 340 FERDGYVRLGFACEQETLIKGLEKLSQFLRR 370
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 34 ETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVT 93
E A + +V+ ++ YG L + P + + ++ LG+ SK + PG R+GW+V
Sbjct: 244 ELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKI-LAPGFRIGWMVG 302
Query: 94 SDPNGILQDSGIVDSIKIFLNISSDPATFIQGAV---PQILEKTEEEFFSKIIDILRETA 150
D GI+ ++I S+D T + G V + E+ +I +
Sbjct: 303 --------DPGIIRKMEI-AKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRR 353
Query: 151 DKCCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI 209
D + L+E +P KPEG MF+ V +L +GI+S L+ A ++ V +PG
Sbjct: 354 DAMLEALEEFMPEGVKWTKPEGGMFIWV----TLPDGIDSKK--MLERAIKKGVAYVPGE 407
Query: 210 TV----GLKDWLRITFA-VEPSALENGLGRM 235
+K+ +R+ F V+ + G+ R+
Sbjct: 408 AFYAHRDVKNTMRLNFTYVDEDKIMEGIKRL 438
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 34 ETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVT 93
E A + +V+ ++ YG L + P + + ++ LG+ SK + PG R+GW+V
Sbjct: 199 ELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKI-LAPGFRIGWMVG 257
Query: 94 SDPNGILQDSGIVDSIKIFLNISSDPATFIQGAV---PQILEKTEEEFFSKIIDILRETA 150
D GI+ ++I S+D T + G V + E+ +I +
Sbjct: 258 --------DPGIIRKMEI-AKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRR 308
Query: 151 DKCCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI 209
D + L+E +P KPEG MF+ V +L +GI+S L+ A ++ V +PG
Sbjct: 309 DAMLEALEEFMPEGVKWTKPEGGMFIWV----TLPDGIDSKK--MLERAIKKGVAYVPGE 362
Query: 210 TV----GLKDWLRITFA-VEPSALENGLGRM 235
+K+ +R+ F V+ + G+ R+
Sbjct: 363 AFYAHRDVKNTMRLNFTYVDEDKIMEGIKRL 393
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 43 VIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVTSDPNGILQD 102
+I++E+Y L + + ++ ++ + + S + G R+G+++++D
Sbjct: 186 IISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISNDE------ 239
Query: 103 SGIVDSI-KIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIP 161
I+++I K+ N+ T Q A + EK E + +I +K+
Sbjct: 240 --IIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFG 297
Query: 162 CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRI 219
P G+ +V + EFA KL KE+ V + PGI G K+++RI
Sbjct: 298 WEV--NNPIGAYYVFPNIG-------EDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRI 348
Query: 220 TFAVEPSALENGLGRMKAFYDR 241
++A ++ GL R+K F ++
Sbjct: 349 SYANSYENIKEGLERIKEFLNK 370
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 32 IAETAKKLG--IMVIANEVYGHLAFG--NTPFVSMGVFGSIVPLLTLGSISKRGIVPGLR 87
+ + +K++G I +IA+E Y + + PFV+ ++V S SK +PG R
Sbjct: 201 LEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCY----SYSKSLSLPGER 256
Query: 88 LGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEK--TEEEFFSKIIDI 145
+G+++ D + D +++ + P + +K + + + I+
Sbjct: 257 IGYVLVPDE--------VYDKAELYAAVCGAGRALGYVCAPSLFQKXIVKCQGATGDINA 308
Query: 146 LRETADKCCDRLKEI--PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESV 203
+E D + L I C KP+G+ + VK + D + AKEE V
Sbjct: 309 YKENRDLLYEGLTRIGYHCF----KPDGAFYXFVK-------ALEDDSNAFCEKAKEEDV 357
Query: 204 IVLPGITVGLKDWLRITFAVEPSALENGLGRMKAFYDRH 242
+++ G W+RI++ V+ +++ + Y ++
Sbjct: 358 LIVAADGFGCPGWVRISYCVDREXIKHSXPAFEKIYKKY 396
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 36/214 (16%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTP-----FVSMGVFGSIVPLLTLGSISKRGIVPGL 86
IA A+ + +I++EVY L +G P F F T+GS KR G
Sbjct: 177 IARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTF-------TVGSAGKRLEATGY 229
Query: 87 RLGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEE-FFSKIIDI 145
R+GW+V G + + ++ + + S+ T +Q V + L+ E F+ + +
Sbjct: 230 RVGWIV-----GPKEFMPRLAGMRQWTSFSAP--TPLQAGVAEALKLARREGFYEALREG 282
Query: 146 LRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV 205
R D L+ + PEG+ F+M +L G + A +L +E V +
Sbjct: 283 YRRRRDLLAGGLRAMGLRVY--VPEGTYFLMAELP-----GWD-----AFRLVEEARVAL 330
Query: 206 LPGITVGL----KDWLRITFAVEPSALENGLGRM 235
+P L KD R F L L R+
Sbjct: 331 IPASAFYLEDPPKDLFRFAFCKTEEELHLALERL 364
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 20/209 (9%)
Query: 40 GIMVIANEVYGHLAFGNTPFVS-MGVFGSIV--PLLTLGSISKRGI-VPGLRLGWLVTSD 95
GI +I++E+Y AF + F+S M V V + + S+S + + +PG R+G + ++D
Sbjct: 207 GIHLISDEIYSGTAFSSPSFISVMEVLKDEVWQRVHVVYSLSXKDLGLPGFRVGAIYSND 266
Query: 96 PNGILQDSGIVDSIKI--FLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153
D + + K+ F +SS + + +K + + ++ L++ K
Sbjct: 267 ------DMVVAAATKMSSFGLVSSQTQHLLSAMLSD--KKLTKNYIAENHKRLKQRQKKL 318
Query: 154 CDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG-INSDMEFALKLAKEESVIVLPGITVG 212
L++ I+C G +F V + + L ++ME K+ E + + PG +
Sbjct: 319 VSGLQK-SGISCLNGNAG-LFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCH 376
Query: 213 LKD--WLRITFAVEPS-ALENGLGRMKAF 238
+ W R+ FA P L+ + R+KAF
Sbjct: 377 CTEPGWFRVCFANLPERTLDLAMQRLKAF 405
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 20/155 (12%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVF---GSIVPLLTLGSISKRGIVPGLRL 88
+A KK ++ +++EVY H+ F PF + + G +T+GS K + G ++
Sbjct: 207 VANLCKKWNVLCVSDEVYEHMVF--EPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKI 264
Query: 89 GWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILE------KTEEEFFSKI 142
GW P +L++ +V N AT IQ A+ E K+ E +F+ I
Sbjct: 265 GW--AYGPEALLKNLQMVHQ-----NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSI 317
Query: 143 IDILRETADKCCDRLKEIPCITCPKKPEGSMFVMV 177
L D L E+ P P+G F++
Sbjct: 318 SGELMAKRDYMASFLAEVG--MNPTVPQGGYFMVA 350
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 40 GIMVIANEVYGHLAFGNTPFVS-MGVFGS---------IVPLLTLGSISKRGIVPGLRLG 89
GI +I++E+Y AF + F+S M V + + S+SK +PG R+G
Sbjct: 224 GIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVG 283
Query: 90 WLVTSDPNGILQDSGIVDSIKI--FLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILR 147
+ ++D D + + K+ F +SS + + +K + + ++ L+
Sbjct: 284 AIYSND------DMVVAAATKMSSFGLVSSQTQHLLSAMLSD--KKLTKNYIAENHKRLK 335
Query: 148 ETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG-INSDMEFALKLAKEESVIVL 206
+ K L++ I+C G +F V + + L ++ME K+ E + +
Sbjct: 336 QRQKKLVSGLQK-SGISCLNGNAG-LFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNIS 393
Query: 207 PGITVGLKD--WLRITFAVEPS-ALENGLGRMKAF 238
PG + + W R+ FA P L+ + R+KAF
Sbjct: 394 PGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 40 GIMVIANEVYGHLAFGNTPFVS-MGVFGS---------IVPLLTLGSISKRGIVPGLRLG 89
GI +I++E+Y AF + F+S M V + + S+SK +PG R+G
Sbjct: 222 GIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVG 281
Query: 90 WLVTSDPNGILQDSGIVDSIKI--FLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILR 147
+ ++D D + + K+ F +SS + + +K + + ++ L+
Sbjct: 282 AIYSND------DMVVAAATKMSSFGLVSSQTQHLLSAMLSD--KKLTKNYIAENHKRLK 333
Query: 148 ETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG-INSDMEFALKLAKEESVIVL 206
+ K L++ I+C G +F V + + L ++ME K+ E + +
Sbjct: 334 QRQKKLVSGLQK-SGISCLNGNAG-LFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNIS 391
Query: 207 PGITVGLKD--WLRITFAVEPS-ALENGLGRMKAF 238
PG + + W R+ FA P L+ + R+KAF
Sbjct: 392 PGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 426
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 40 GIMVIANEVYGHLAFGNTPFVS-MGVFGS---------IVPLLTLGSISKRGIVPGLRLG 89
GI +I++E+Y AF + F+S M V + + S+SK +PG R+G
Sbjct: 224 GIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVG 283
Query: 90 WLVTSDPNGILQDSGIVDSIKI--FLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILR 147
+ ++D D + + K+ F +SS + + +K + + ++ L+
Sbjct: 284 AIYSND------DMVVAAATKMSSFGLVSSQTQHLLSAMLSD--KKLTKNYIAENHKRLK 335
Query: 148 ETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG-INSDMEFALKLAKEESVIVL 206
+ K L++ I+C G +F V + + L ++ME K+ E + +
Sbjct: 336 QRQKKLVSGLQK-SGISCLNGNAG-LFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNIS 393
Query: 207 PGITVGLKD--WLRITFAVEPS-ALENGLGRMKAF 238
PG + + W R+ FA P L+ + R+KAF
Sbjct: 394 PGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 43/230 (18%)
Query: 38 KLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTL--GSISKRGIVPGLRLGWLVTSD 95
K +++I++EVY HL F ++ F + + LTL GS G R+GW+++
Sbjct: 232 KHNVVIISDEVYEHLYFTDS-FTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGWVLSL- 289
Query: 96 PNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQI--------LEKTEEEFFSKIIDILR 147
N L +I + P+ + I EK +E+ +K I
Sbjct: 290 -NAELLSYAAKAHTRICF---ASPSPLQEACANSINDALKIGYFEKMRQEYINK-FKIFT 344
Query: 148 ETADKCCDRLKEIPCITCPKKPEGSMFVMVKL-------NYSLLEGI---NSDMEFALKL 197
D+ +P PEG+ FV+V +Y E I D + L
Sbjct: 345 SIFDELG-----LPYTA----PEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWL 395
Query: 198 AKEESVIVLPGITVGLKDW-------LRITFAVEPSALENGLGRMKAFYD 240
E V+ +P +K+ LR + + LEN + R+K D
Sbjct: 396 INELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKLLKD 445
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVF-GSIVPLLTLGSISKRGIVPGLRLGW 90
+A ++ ++ I +EVY + + +S+ G LT+GS K G ++GW
Sbjct: 199 VASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGW 258
Query: 91 LVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQG-AVPQILEKTEEEFFSKIIDILRET 149
++ P+ I++ V +F + A + Q+L + +F + ++
Sbjct: 259 VL--GPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRC 316
Query: 150 ADKCCDRLKEIPCITCPKKPEGSMFVMVKLN 180
D L+ + P P+GS F++ ++
Sbjct: 317 RDHMIRSLQSVGL--KPLIPQGSYFLITDIS 345
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/151 (19%), Positives = 63/151 (41%), Gaps = 6/151 (3%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVF-GSIVPLLTLGSISKRGIVPGLRLGW 90
+A ++ ++ I +EVY + + +S+ G LT+GS G ++GW
Sbjct: 199 VASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGW 258
Query: 91 LVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQG-AVPQILEKTEEEFFSKIIDILRET 149
++ P+ I++ V +F + A + Q+L + +F + ++
Sbjct: 259 VL--GPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRC 316
Query: 150 ADKCCDRLKEIPCITCPKKPEGSMFVMVKLN 180
D L+ + P P+GS F++ ++
Sbjct: 317 RDHMIRSLQSVGL--KPLIPQGSYFLITDIS 345
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/151 (19%), Positives = 63/151 (41%), Gaps = 6/151 (3%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVF-GSIVPLLTLGSISKRGIVPGLRLGW 90
+A ++ ++ I +EVY + + +S+ G LT+GS G ++GW
Sbjct: 199 VASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGW 258
Query: 91 LVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQG-AVPQILEKTEEEFFSKIIDILRET 149
++ P+ I++ V +F + A + Q+L + +F + ++
Sbjct: 259 VL--GPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRC 316
Query: 150 ADKCCDRLKEIPCITCPKKPEGSMFVMVKLN 180
D L+ + P P+GS F++ ++
Sbjct: 317 RDHMIRSLQSVGL--KPIIPQGSYFLITDIS 345
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91
IA+ K L I +I +E + T F+ + L S++K +PGLRLG+L
Sbjct: 171 IADRCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTKFYAIPGLRLGYL 228
Query: 92 VTSD 95
V SD
Sbjct: 229 VNSD 232
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 25/182 (13%)
Query: 34 ETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVT 93
E A K +++I + Y + + V + + ++ G++SK + G R+GW++
Sbjct: 202 EIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKV-LGTGFRIGWIIA 260
Query: 94 SDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQI--LEKTEEEFFSKI-----IDIL 146
IL+ K+ + P F A+ Q LE + +F K +
Sbjct: 261 E--GEILK--------KVLMQ--KQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGY 308
Query: 147 RETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL 206
+E D L+ KP MFVM + L EG + + FA +L + E V+V+
Sbjct: 309 KEKRDIMLKALENHLPNAEFTKPIAGMFVM----FFLPEGADG-ISFANELMEREGVVVV 363
Query: 207 PG 208
PG
Sbjct: 364 PG 365
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 68/172 (39%), Gaps = 8/172 (4%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVF-GSIVPLLTLGSISKRGIVPGLRLGW 90
IA+ K + I++EVY L + V + G +T+GS K V G +LGW
Sbjct: 192 IADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGW 251
Query: 91 LVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEE-FFSKIIDILRET 149
+ P +++ V + + A + I + E +F+ + L
Sbjct: 252 SI--GPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVK 309
Query: 150 ADKCCDRLKEIPCITCPKKPEGSMFVMVKLNY--SLLEGINSDMEFALKLAK 199
D+ L + P P+G F++ ++ + L +NSD + K K
Sbjct: 310 RDRMVRLLNSVGLK--PIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVK 359
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 36 AKKLGIMVIANEVYGHLAFGNTPFVS-MGVFGSIVPLLTLGSISKRGIVPGLRLGWLVTS 94
AK+ +MV+ + Y + + S M V G+ + ++SK + G R+G++V
Sbjct: 201 AKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMV-- 258
Query: 95 DPNGILQDSGIVDSIKIFLNISS--DPATF--IQGAVPQILEKTEEEFFSKIIDILRETA 150
G + + I S D TF +Q A LE +++ I ++
Sbjct: 259 ---------GNPELVSALARIKSYHDYGTFTPLQVAAIAALE-GDQQCVRDIARQYQQRR 308
Query: 151 DKCCDRLKEIPCITCPKKPEGSMFVMVKLN--YSLLEGINSDMEFALKLAKEESVIVLPG 208
D L+E + + P+ SM+V K+ Y+ L +EFA KL ++ V V PG
Sbjct: 309 DVLVKGLREAGWMV--ENPKASMYVWAKIPEPYAHL----GSLEFAKKLLQDAKVSVSPG 362
Query: 209 ITVG 212
I G
Sbjct: 363 IGFG 366
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 86/219 (39%), Gaps = 30/219 (13%)
Query: 34 ETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVT 93
E A+ G I++E+Y + + ++ + + S SK G R+GW V
Sbjct: 188 EAAQAQGASFISDEIYHGIEYEAKAVTALELTDEC---YVINSFSKYFSXTGWRVGWXVV 244
Query: 94 SDPNGILQDSGIVDSIKIFLNISSDPATFI----QGAVPQILEKTEEEFFSKIIDILRET 149
+ D +++ I+ + FI V + + +D+ +
Sbjct: 245 PE-----------DQVRVVERIAQN--XFICAPHASQVAALAALDCDAELQANLDVYKAN 291
Query: 150 ADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDME-FALKLAKEESVIVLPG 208
+RL + T P+G+ +V Y+ + + D FA ++ ++ V V PG
Sbjct: 292 RKLXLERLPKA-GFTRIAPPDGAFYV-----YADVSDLTDDSRAFAAEILEKAGVAVTPG 345
Query: 209 ITVGLK---DWLRITFAVEPSALENGLGRMKAFYDRHAE 244
+ + LR ++A + +E GL R++AF E
Sbjct: 346 LDFDPERGAGTLRFSYARATADIEEGLDRLEAFXQARGE 384
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 14/151 (9%)
Query: 108 SIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC---DRLKEIPCIT 164
S+++ +S A I P E++ E+F + +L A K D ++P I
Sbjct: 347 SVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIH 406
Query: 165 CPKKPEGSMFVMVKL-------NYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKD-- 215
C +G+M+ ++ + + DM + +KL +E + V+PG G ++
Sbjct: 407 C-NPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGT 465
Query: 216 -WLRITFAVEPSALENGLGRMKAFYDRHAEK 245
R+T L+ L ++K F+ EK
Sbjct: 466 YHFRMTILPPVEKLKTVLQKVKDFHINFLEK 496
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 41 IMVIANEVYGHLAFGNTPFVSMGVF-GSIVPLLTLGSISKRGIVPGLRLGWLVTSDPNGI 99
++VI +EVY HL F + + + F G +T+ S + G ++GW P +
Sbjct: 194 LVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW--ACGPAEL 251
Query: 100 LQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKE 159
+ +G+ + + + P Q AV L+ TE+ + + + + LR D+ L E
Sbjct: 252 I--AGVRAAKQYLSYVGGAP---FQPAVALALD-TEDAWVAALRNSLRARRDRLAAGLTE 305
Query: 160 I 160
I
Sbjct: 306 I 306
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 8/172 (4%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVF-GSIVPLLTLGSISKRGIVPGLRLGW 90
IA+ K + I++EVY L + V + G +T+GS V G +LGW
Sbjct: 192 IADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGW 251
Query: 91 LVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEE-FFSKIIDILRET 149
+ P +++ V + + A + I + E +F+ + L
Sbjct: 252 SI--GPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVK 309
Query: 150 ADKCCDRLKEIPCITCPKKPEGSMFVMVKLNY--SLLEGINSDMEFALKLAK 199
D+ L + P P+G F++ ++ + L +NSD + K K
Sbjct: 310 RDRMVRLLNSVGLK--PIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVK 359
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 5/123 (4%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91
+ E AKK G +++ + Y + P + G+ + S SK G+RLGW
Sbjct: 223 LVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWT 282
Query: 92 VTSDPNGILQDSGI---VDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRE 148
V P +L G D +I + + Q L E K+I +E
Sbjct: 283 VI--PKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKE 340
Query: 149 TAD 151
+
Sbjct: 341 NTN 343
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 36 AKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVTSD 95
A+K G+ +I + Y + + + G+ ++ L S+SK + G RLG+ + S+
Sbjct: 187 ARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE 246
Query: 96 PNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155
+ ++ +K ++ + G + L KT +E + RE A +
Sbjct: 247 -----EALARLERVKGVIDFNQYAGVLRMGV--EAL-KTPKEVVRGYARVYRERALGMAE 298
Query: 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKL 197
LK + + P+ +M++ +L EG++ D+EF L+L
Sbjct: 299 ALKGVLSLLPPR---ATMYLWGRLP----EGVD-DLEFGLRL 332
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91
+ E AKK G +++ + Y + P + G+ S SK G+RLGW
Sbjct: 223 LVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGWT 282
Query: 92 VTSDPNGILQDSGI 105
V P +L G
Sbjct: 283 VI--PKKLLYSDGF 294
>pdb|1ZYE|A Chain A, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|B Chain B, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|C Chain C, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|D Chain D, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|E Chain E, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|F Chain F, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|G Chain G, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|H Chain H, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|I Chain I, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|J Chain J, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|K Chain K, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|L Chain L, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
Length = 220
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 41 IMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLT--LGSISK-RGIV---PGLRLGWLVTS 94
+ V + + HLA+ NTP + G+ + LL+ IS+ G++ PGL L L
Sbjct: 94 VAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFII 153
Query: 95 DPNGILQDSGIVD 107
DPNG+++ + D
Sbjct: 154 DPNGVIKHLSVND 166
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 5/123 (4%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91
+ E AKK G +++ + Y + P + G+ + S S+ G+RLGW
Sbjct: 223 LVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWT 282
Query: 92 VTSDPNGILQDSGI---VDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRE 148
V P +L G D +I + + Q L E K+I +E
Sbjct: 283 VI--PKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKE 340
Query: 149 TAD 151
+
Sbjct: 341 NTN 343
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Query: 32 IAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91
+ E AKK G +++ + Y + P + G+ + S S G+RLGW
Sbjct: 223 LVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWT 282
Query: 92 VTSDPNGILQDSGI---VDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRE 148
V P +L G D +I + + Q L E K+I +E
Sbjct: 283 VI--PKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKE 340
Query: 149 TAD 151
+
Sbjct: 341 NTN 343
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 32 IAETAKKLGIMVIANEVYG-HLAFGNTPF-------VSMGVFGSIVPLLTLGSISKRGIV 83
I + K G++++A+EVY ++ N F S+G +PL++ S+SK
Sbjct: 262 IVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYG 321
Query: 84 P-GLRLGWL-VTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSK 141
G R G+ +T + + + S+ + NI+ + P+ +++ + ++
Sbjct: 322 ECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAE 381
Query: 142 ---IIDILRETADKCCDRLKEIPCITCPKKPEGSMFVM--VKLNYSLLEGINS-----DM 191
I+ L A ++ ITC + EG+M+V + L +E + D
Sbjct: 382 KDGILASLARRAKALEHAFNKLEGITC-NEAEGAMYVFPQICLPQKAIEAAKAANKAPDA 440
Query: 192 EFALKLAKEESVIVLPGITVG 212
+AL+L + ++V+PG G
Sbjct: 441 FYALRLLESTGIVVVPGSGFG 461
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,564,187
Number of Sequences: 62578
Number of extensions: 257484
Number of successful extensions: 630
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 604
Number of HSP's gapped (non-prelim): 49
length of query: 246
length of database: 14,973,337
effective HSP length: 96
effective length of query: 150
effective length of database: 8,965,849
effective search space: 1344877350
effective search space used: 1344877350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)