Query 042445
Match_columns 246
No_of_seqs 125 out of 1364
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 10:30:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042445.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042445hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dyd_A Tyrosine aminotransfera 100.0 2E-37 6.9E-42 265.8 23.8 240 2-243 182-425 (427)
2 2r2n_A Kynurenine/alpha-aminoa 100.0 4.3E-36 1.5E-40 257.4 24.6 216 13-242 197-424 (425)
3 3aow_A Putative uncharacterize 100.0 7E-36 2.4E-40 257.7 24.5 217 12-244 222-447 (448)
4 1b5p_A Protein (aspartate amin 100.0 2.2E-36 7.5E-41 255.9 20.8 221 3-240 156-383 (385)
5 1bw0_A TAT, protein (tyrosine 100.0 1.4E-35 4.8E-40 253.2 24.7 240 2-244 168-415 (416)
6 3ihj_A Alanine aminotransferas 100.0 7.4E-36 2.5E-40 260.5 20.8 224 12-245 240-496 (498)
7 3tcm_A Alanine aminotransferas 100.0 1.9E-35 6.4E-40 258.2 21.8 224 12-244 242-496 (500)
8 3fdb_A Beta C-S lyase, putativ 100.0 3.8E-35 1.3E-39 247.2 18.2 227 2-242 141-376 (377)
9 3nra_A Aspartate aminotransfer 100.0 6.8E-35 2.3E-39 248.0 19.8 228 2-243 170-406 (407)
10 2o1b_A Aminotransferase, class 100.0 9.5E-35 3.3E-39 247.5 20.3 224 2-242 172-403 (404)
11 1c7n_A Cystalysin; transferase 100.0 2.4E-34 8.2E-39 244.2 22.6 230 2-244 154-395 (399)
12 1j32_A Aspartate aminotransfer 100.0 1.8E-34 6.3E-39 244.1 21.7 227 2-242 154-387 (388)
13 2x5d_A Probable aminotransfera 100.0 3.5E-34 1.2E-38 244.4 22.9 229 2-243 163-399 (412)
14 3ei9_A LL-diaminopimelate amin 100.0 1.2E-34 4.2E-39 248.7 19.9 219 12-242 203-428 (432)
15 3piu_A 1-aminocyclopropane-1-c 100.0 2.9E-34 1E-38 246.6 21.8 222 12-243 196-433 (435)
16 3h14_A Aminotransferase, class 100.0 4.6E-34 1.6E-38 242.0 22.5 216 12-245 166-385 (391)
17 3qgu_A LL-diaminopimelate amin 100.0 1.6E-34 5.5E-39 249.1 19.9 217 12-244 214-442 (449)
18 3jtx_A Aminotransferase; NP_28 100.0 2.8E-34 9.7E-39 243.5 20.9 219 2-239 159-395 (396)
19 3dzz_A Putative pyridoxal 5'-p 100.0 7.1E-34 2.4E-38 240.4 22.8 229 2-243 150-390 (391)
20 1gd9_A Aspartate aminotransfer 100.0 6.7E-34 2.3E-38 240.7 22.4 228 2-243 151-387 (389)
21 3fvs_A Kynurenine--oxoglutarat 100.0 1.8E-34 6E-39 246.8 18.9 228 3-241 166-421 (422)
22 2dou_A Probable N-succinyldiam 100.0 4.2E-34 1.4E-38 241.0 20.9 220 2-239 149-375 (376)
23 3b46_A Aminotransferase BNA3; 100.0 1.7E-34 5.7E-39 249.0 18.4 226 2-238 192-443 (447)
24 3kax_A Aminotransferase, class 100.0 9.6E-34 3.3E-38 239.0 22.3 225 2-239 147-382 (383)
25 1vp4_A Aminotransferase, putat 100.0 5.2E-34 1.8E-38 244.4 20.4 216 13-244 194-420 (425)
26 3d6k_A Putative aminotransfera 100.0 7.6E-34 2.6E-38 243.2 20.8 226 2-244 168-420 (422)
27 2zyj_A Alpha-aminodipate amino 100.0 1.5E-33 5.1E-38 239.4 22.3 227 2-244 152-395 (397)
28 3op7_A Aminotransferase class 100.0 7.3E-34 2.5E-38 239.4 19.6 224 2-244 145-373 (375)
29 3e2y_A Kynurenine-oxoglutarate 100.0 4.4E-34 1.5E-38 243.3 18.0 224 3-237 159-408 (410)
30 1iay_A ACC synthase 2, 1-amino 100.0 1.6E-33 5.5E-38 241.4 21.6 221 12-242 193-427 (428)
31 1u08_A Hypothetical aminotrans 100.0 5.4E-34 1.8E-38 241.2 18.1 222 2-237 154-385 (386)
32 1yiz_A Kynurenine aminotransfe 100.0 6.3E-34 2.2E-38 244.0 17.2 228 3-240 174-427 (429)
33 4dq6_A Putative pyridoxal phos 100.0 3.6E-33 1.2E-37 236.1 21.3 215 12-239 169-390 (391)
34 3l8a_A METC, putative aminotra 100.0 2.4E-33 8.1E-38 240.0 20.4 226 2-240 184-420 (421)
35 1d2f_A MALY protein; aminotran 100.0 5.3E-33 1.8E-37 235.4 22.3 227 2-242 152-389 (390)
36 2o0r_A RV0858C (N-succinyldiam 100.0 1.6E-33 5.6E-38 240.2 19.2 228 2-243 151-397 (411)
37 3ezs_A Aminotransferase ASPB; 100.0 2.5E-33 8.7E-38 236.1 19.6 207 12-242 159-375 (376)
38 2zc0_A Alanine glyoxylate tran 100.0 9.3E-33 3.2E-37 235.0 23.1 217 12-243 180-405 (407)
39 1o4s_A Aspartate aminotransfer 100.0 5.3E-33 1.8E-37 235.5 20.4 217 2-240 165-387 (389)
40 3ppl_A Aspartate aminotransfer 100.0 5E-33 1.7E-37 238.4 20.4 225 2-243 170-421 (427)
41 2x5f_A Aspartate_tyrosine_phen 100.0 8.7E-33 3E-37 237.0 21.3 221 2-242 177-429 (430)
42 3k7y_A Aspartate aminotransfer 100.0 9.8E-34 3.3E-38 240.9 15.2 203 12-241 178-404 (405)
43 3ele_A Amino transferase; RER0 100.0 7.1E-33 2.4E-37 235.1 20.5 223 2-243 163-397 (398)
44 3asa_A LL-diaminopimelate amin 100.0 4E-33 1.4E-37 237.0 18.0 214 12-243 168-394 (400)
45 3g7q_A Valine-pyruvate aminotr 100.0 2.9E-32 1E-36 232.6 23.4 216 12-244 185-415 (417)
46 1xi9_A Putative transaminase; 100.0 1.1E-32 3.6E-37 234.8 20.0 231 2-243 165-404 (406)
47 1v2d_A Glutamine aminotransfer 100.0 1.1E-32 3.6E-37 232.8 18.5 221 2-244 143-373 (381)
48 2zy4_A L-aspartate beta-decarb 100.0 1.7E-32 5.9E-37 241.4 20.5 217 12-243 250-523 (546)
49 3ez1_A Aminotransferase MOCR f 100.0 2.6E-32 9E-37 233.5 20.7 225 2-243 161-416 (423)
50 2gb3_A Aspartate aminotransfer 100.0 1.4E-31 4.8E-36 228.1 24.6 226 2-244 165-404 (409)
51 1fg7_A Histidinol phosphate am 100.0 3.6E-32 1.2E-36 227.9 20.5 201 12-237 151-353 (356)
52 2z61_A Probable aspartate amin 100.0 2.2E-32 7.5E-37 230.0 19.1 217 2-240 145-369 (370)
53 3f6t_A Aspartate aminotransfer 100.0 1.5E-32 5.1E-37 241.5 18.5 233 2-244 235-527 (533)
54 3ffh_A Histidinol-phosphate am 100.0 4.9E-32 1.7E-36 227.2 20.0 213 2-238 146-362 (363)
55 3g0t_A Putative aminotransfera 100.0 1.4E-31 4.7E-36 229.8 21.2 223 2-241 172-436 (437)
56 1lc5_A COBD, L-threonine-O-3-p 100.0 1.6E-31 5.4E-36 224.4 21.0 207 12-242 151-360 (364)
57 3ftb_A Histidinol-phosphate am 100.0 1.8E-31 6.3E-36 223.4 21.2 207 12-239 149-358 (361)
58 3ly1_A Putative histidinol-pho 100.0 7.4E-32 2.5E-36 225.3 18.5 215 2-241 130-351 (354)
59 3b1d_A Betac-S lyase; HET: PLP 100.0 6.9E-35 2.3E-39 247.3 0.0 216 12-240 169-391 (392)
60 3rq1_A Aminotransferase class 100.0 8E-32 2.8E-36 230.1 18.3 208 12-243 184-416 (418)
61 3if2_A Aminotransferase; YP_26 100.0 7.5E-31 2.6E-35 225.8 23.7 217 12-244 211-442 (444)
62 3get_A Histidinol-phosphate am 100.0 7.9E-32 2.7E-36 226.1 16.7 214 2-239 144-364 (365)
63 3t18_A Aminotransferase class 100.0 2.1E-31 7.2E-36 227.2 18.4 206 12-244 183-412 (413)
64 3euc_A Histidinol-phosphate am 100.0 5.1E-31 1.7E-35 221.4 19.7 211 2-240 147-366 (367)
65 4eu1_A Mitochondrial aspartate 100.0 9.2E-32 3.2E-36 229.2 14.4 202 12-239 188-408 (409)
66 4h51_A Aspartate aminotransfer 100.0 2.1E-31 7.2E-36 226.9 16.1 209 12-244 195-419 (420)
67 4f4e_A Aromatic-amino-acid ami 100.0 2.9E-31 9.9E-36 227.0 16.6 212 2-239 183-419 (420)
68 3bwn_A AT1G70560, L-tryptophan 100.0 1.5E-31 5.2E-36 226.8 12.5 200 12-243 162-388 (391)
69 1ajs_A Aspartate aminotransfer 100.0 5.9E-31 2E-35 224.3 15.8 204 12-242 188-411 (412)
70 3fsl_A Aromatic-amino-acid ami 100.0 6.9E-31 2.4E-35 222.7 15.7 203 12-238 178-396 (397)
71 7aat_A Aspartate aminotransfer 100.0 1.2E-30 4.2E-35 221.6 15.0 204 12-239 180-400 (401)
72 3meb_A Aspartate aminotransfer 100.0 1.3E-30 4.6E-35 224.7 15.1 210 12-242 207-444 (448)
73 3fkd_A L-threonine-O-3-phospha 100.0 3.4E-30 1.2E-34 215.1 16.1 206 12-241 134-341 (350)
74 1yaa_A Aspartate aminotransfer 100.0 1.7E-30 5.8E-35 221.5 13.9 203 12-241 181-410 (412)
75 3hdo_A Histidinol-phosphate am 100.0 3.6E-29 1.2E-33 209.7 20.4 201 12-241 154-354 (360)
76 2q7w_A Aspartate aminotransfer 100.0 5.3E-30 1.8E-34 217.2 12.1 205 12-238 177-395 (396)
77 2hox_A ALLIIN lyase 1; cystein 100.0 1.7E-29 5.8E-34 216.5 15.0 209 2-241 187-424 (427)
78 3p1t_A Putative histidinol-pho 100.0 2.2E-28 7.4E-33 202.9 19.6 195 12-239 140-334 (337)
79 2ay1_A Aroat, aromatic amino a 100.0 3.1E-29 1.1E-33 212.4 12.8 201 12-238 174-392 (394)
80 1uu1_A Histidinol-phosphate am 100.0 2.4E-28 8.1E-33 202.9 16.8 192 12-238 143-334 (335)
81 3cq5_A Histidinol-phosphate am 100.0 8.9E-28 3E-32 201.9 19.3 207 2-240 154-366 (369)
82 3a2b_A Serine palmitoyltransfe 99.9 1.9E-26 6.4E-31 195.6 20.0 207 12-243 178-393 (398)
83 1fc4_A 2-amino-3-ketobutyrate 99.9 1.7E-25 5.8E-30 189.8 19.7 206 12-243 182-398 (401)
84 3tqx_A 2-amino-3-ketobutyrate 99.9 2.5E-25 8.4E-30 188.5 20.1 208 12-242 180-396 (399)
85 2dr1_A PH1308 protein, 386AA l 99.9 5.2E-25 1.8E-29 185.6 21.2 205 12-243 151-380 (386)
86 1e5e_A MGL, methionine gamma-l 99.9 8.9E-25 3.1E-29 186.0 20.6 208 2-245 138-398 (404)
87 1vjo_A Alanine--glyoxylate ami 99.9 2.6E-25 8.7E-30 188.2 17.1 212 2-239 149-392 (393)
88 2ord_A Acoat, acetylornithine 99.9 2.6E-26 8.8E-31 194.8 9.9 213 2-241 174-396 (397)
89 1sff_A 4-aminobutyrate aminotr 99.9 1.3E-25 4.5E-30 191.9 14.1 209 14-243 207-425 (426)
90 2w8t_A SPT, serine palmitoyltr 99.9 3.5E-25 1.2E-29 189.7 16.3 209 12-243 199-416 (427)
91 2bwn_A 5-aminolevulinate synth 99.9 7.8E-25 2.7E-29 185.8 18.2 208 12-241 183-399 (401)
92 1bs0_A Protein (8-amino-7-oxon 99.9 7.5E-25 2.6E-29 184.8 17.4 201 12-238 173-383 (384)
93 4ffc_A 4-aminobutyrate aminotr 99.9 1.3E-25 4.6E-30 193.7 12.9 217 12-245 229-452 (453)
94 3i4j_A Aminotransferase, class 99.9 1.3E-24 4.4E-29 186.3 18.0 226 2-242 177-428 (430)
95 4adb_A Succinylornithine trans 99.9 3.1E-25 1.1E-29 188.4 13.9 219 2-244 174-402 (406)
96 1zod_A DGD, 2,2-dialkylglycine 99.9 4.1E-25 1.4E-29 189.4 14.4 213 12-242 207-432 (433)
97 2eh6_A Acoat, acetylornithine 99.9 4E-25 1.4E-29 185.9 13.5 204 2-238 163-374 (375)
98 3kki_A CAI-1 autoinducer synth 99.9 2.5E-24 8.4E-29 183.3 18.2 215 2-242 176-404 (409)
99 1kmj_A Selenocysteine lyase; p 99.9 2.7E-24 9.1E-29 182.3 18.1 212 2-242 155-405 (406)
100 2eo5_A 419AA long hypothetical 99.9 1.1E-24 3.9E-29 186.1 15.8 198 12-242 216-418 (419)
101 3ruy_A Ornithine aminotransfer 99.9 1.1E-24 3.6E-29 184.5 14.2 208 2-239 173-391 (392)
102 3oks_A 4-aminobutyrate transam 99.9 3E-24 1E-28 185.2 15.9 213 12-241 231-450 (451)
103 3nx3_A Acoat, acetylornithine 99.9 1.3E-24 4.5E-29 184.1 13.4 215 2-241 170-394 (395)
104 3gju_A Putative aminotransfera 99.9 1.1E-23 3.6E-28 182.2 18.4 217 12-245 225-459 (460)
105 1t3i_A Probable cysteine desul 99.9 7.9E-24 2.7E-28 180.2 17.0 214 2-243 160-414 (420)
106 3kgw_A Alanine-glyoxylate amin 99.9 1.3E-23 4.3E-28 177.4 18.1 216 2-244 138-390 (393)
107 3dxv_A Alpha-amino-epsilon-cap 99.9 4E-24 1.4E-28 183.7 15.1 214 12-243 206-426 (439)
108 3lws_A Aromatic amino acid bet 99.9 3.8E-24 1.3E-28 178.8 14.6 205 12-239 140-356 (357)
109 3n5m_A Adenosylmethionine-8-am 99.9 3.2E-24 1.1E-28 185.0 14.2 214 12-241 220-451 (452)
110 1eg5_A Aminotransferase; PLP-d 99.9 7.8E-24 2.7E-28 178.1 16.0 214 2-244 130-378 (384)
111 2yrr_A Aminotransferase, class 99.9 1.2E-23 4E-28 175.0 16.7 212 2-241 114-352 (353)
112 2pb2_A Acetylornithine/succiny 99.9 4.4E-24 1.5E-28 182.6 14.1 215 2-242 192-418 (420)
113 2huf_A Alanine glyoxylate amin 99.9 2.3E-23 7.9E-28 176.1 18.3 216 2-244 134-385 (393)
114 4a6r_A Omega transaminase; tra 99.9 1.4E-23 4.8E-28 181.4 16.8 214 12-244 223-451 (459)
115 1s0a_A Adenosylmethionine-8-am 99.9 1.1E-23 3.8E-28 180.4 16.0 203 12-243 208-425 (429)
116 1m32_A 2-aminoethylphosphonate 99.9 2.2E-23 7.5E-28 174.2 16.4 202 12-241 136-364 (366)
117 1vef_A Acetylornithine/acetyl- 99.9 8.1E-24 2.8E-28 179.2 13.8 210 2-239 176-394 (395)
118 3zrp_A Serine-pyruvate aminotr 99.9 1.1E-22 3.7E-27 171.1 19.9 213 2-243 117-364 (384)
119 2aeu_A Hypothetical protein MJ 99.9 2E-23 6.9E-28 175.9 15.3 215 12-244 146-373 (374)
120 2z9v_A Aspartate aminotransfer 99.9 1.7E-22 5.7E-27 170.7 20.1 204 12-243 139-372 (392)
121 3pj0_A LMO0305 protein; struct 99.9 2.4E-23 8.3E-28 174.0 14.4 204 12-238 142-358 (359)
122 2ch1_A 3-hydroxykynurenine tra 99.9 9.9E-23 3.4E-27 172.3 17.8 216 2-243 133-384 (396)
123 1iug_A Putative aspartate amin 99.9 2.4E-22 8.3E-27 167.2 18.9 204 12-244 126-350 (352)
124 1elu_A L-cysteine/L-cystine C- 99.9 6.7E-23 2.3E-27 172.9 15.5 207 2-237 145-387 (390)
125 2dkj_A Serine hydroxymethyltra 99.9 4.8E-22 1.6E-26 168.7 20.6 214 2-241 153-387 (407)
126 3l44_A Glutamate-1-semialdehyd 99.9 1.6E-23 5.6E-28 179.6 11.6 210 12-244 206-432 (434)
127 3ffr_A Phosphoserine aminotran 99.9 2.6E-22 8.8E-27 167.6 17.9 198 12-239 135-361 (362)
128 1z7d_A Ornithine aminotransfer 99.9 8.1E-23 2.8E-27 175.4 14.6 216 2-244 202-431 (433)
129 4eb5_A Probable cysteine desul 99.9 1.4E-22 4.9E-27 170.4 15.5 218 2-244 129-375 (382)
130 3nnk_A Ureidoglycine-glyoxylat 99.9 4.6E-22 1.6E-26 168.9 18.8 216 2-243 128-391 (411)
131 3lvm_A Cysteine desulfurase; s 99.9 1.9E-22 6.6E-27 172.1 16.4 212 2-244 154-401 (423)
132 3a8u_X Omega-amino acid--pyruv 99.9 1E-22 3.4E-27 175.4 14.5 207 12-242 223-447 (449)
133 3f9t_A TDC, L-tyrosine decarbo 99.9 3.4E-22 1.2E-26 168.6 17.4 210 2-240 161-396 (397)
134 3dod_A Adenosylmethionine-8-am 99.9 1.8E-22 6.3E-27 173.9 15.8 211 12-243 214-444 (448)
135 3i5t_A Aminotransferase; pyrid 99.9 1.7E-22 5.9E-27 175.2 15.3 210 12-244 226-456 (476)
136 3k28_A Glutamate-1-semialdehyd 99.9 4.7E-23 1.6E-27 176.5 10.6 207 12-242 204-427 (429)
137 4hvk_A Probable cysteine desul 99.9 6.5E-22 2.2E-26 166.1 17.4 218 2-244 129-375 (382)
138 3tfu_A Adenosylmethionine-8-am 99.9 2.7E-22 9.1E-27 173.2 15.3 204 12-243 238-454 (457)
139 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.1E-23 3.9E-28 176.6 6.4 196 12-242 152-370 (371)
140 2oat_A Ornithine aminotransfer 99.9 3.5E-22 1.2E-26 171.7 15.8 215 2-241 213-438 (439)
141 1w23_A Phosphoserine aminotran 99.9 2E-22 6.9E-27 168.4 13.6 205 2-241 131-359 (360)
142 1v72_A Aldolase; PLP-dependent 99.9 3.9E-22 1.3E-26 166.2 15.1 202 12-243 146-354 (356)
143 3isl_A Purine catabolism prote 99.9 2.3E-21 8E-26 164.9 20.1 214 2-243 126-391 (416)
144 2rfv_A Methionine gamma-lyase; 99.9 2E-21 6.8E-26 164.9 19.6 202 2-236 140-394 (398)
145 3f0h_A Aminotransferase; RER07 99.9 1.1E-21 3.6E-26 164.9 17.6 213 2-241 135-373 (376)
146 3hmu_A Aminotransferase, class 99.9 5.9E-22 2E-26 171.7 16.1 210 12-243 227-453 (472)
147 2fyf_A PSAT, phosphoserine ami 99.9 1E-21 3.4E-26 166.7 16.2 200 12-241 170-397 (398)
148 1jg8_A L-ALLO-threonine aldola 99.9 2.5E-22 8.7E-27 167.0 12.3 201 12-242 137-346 (347)
149 1ibj_A CBL, cystathionine beta 99.9 1.8E-21 6.3E-26 168.1 17.6 212 2-241 208-461 (464)
150 2bkw_A Alanine-glyoxylate amin 99.9 1.5E-21 5E-26 164.4 16.6 209 2-241 127-383 (385)
151 1cs1_A CGS, protein (cystathio 99.9 8.5E-21 2.9E-25 160.3 20.7 209 2-243 128-384 (386)
152 2epj_A Glutamate-1-semialdehyd 99.9 3.3E-22 1.1E-26 171.5 12.1 211 12-244 207-433 (434)
153 3cai_A Possible aminotransfera 99.9 2.4E-21 8.2E-26 164.4 16.4 207 2-237 156-404 (406)
154 4e77_A Glutamate-1-semialdehyd 99.9 4.2E-22 1.4E-26 170.6 11.8 210 12-241 204-428 (429)
155 2e7u_A Glutamate-1-semialdehyd 99.9 2.5E-22 8.7E-27 171.7 10.3 206 12-239 203-424 (424)
156 3fq8_A Glutamate-1-semialdehyd 99.9 3.3E-22 1.1E-26 171.1 11.0 207 12-241 204-426 (427)
157 2ez2_A Beta-tyrosinase, tyrosi 99.9 3.2E-21 1.1E-25 166.2 17.2 213 12-243 179-432 (456)
158 2cy8_A D-phgat, D-phenylglycin 99.9 5.9E-22 2E-26 170.8 11.8 207 12-243 205-436 (453)
159 2cjg_A L-lysine-epsilon aminot 99.9 1.1E-21 3.9E-26 169.0 12.8 207 4-242 221-448 (449)
160 3ndn_A O-succinylhomoserine su 99.9 9E-21 3.1E-25 161.6 16.7 207 2-239 157-413 (414)
161 1pff_A Methionine gamma-lyase; 99.9 7.6E-21 2.6E-25 157.2 15.5 204 2-237 74-329 (331)
162 3ecd_A Serine hydroxymethyltra 99.9 1.8E-20 6.3E-25 159.7 17.8 216 2-242 162-397 (425)
163 1gc0_A Methionine gamma-lyase; 99.9 3.9E-20 1.3E-24 157.0 19.2 203 2-236 141-395 (398)
164 2vi8_A Serine hydroxymethyltra 99.9 2.3E-20 7.8E-25 158.3 17.6 216 2-242 153-387 (405)
165 3vax_A Putative uncharacterize 99.9 3E-21 1E-25 163.4 11.4 216 2-241 150-399 (400)
166 2c0r_A PSAT, phosphoserine ami 99.8 5.8E-21 2E-25 159.8 12.6 196 12-242 147-361 (362)
167 1qz9_A Kynureninase; kynurenin 99.8 1.2E-20 4.3E-25 160.5 14.8 208 2-242 156-402 (416)
168 3n0l_A Serine hydroxymethyltra 99.8 8.9E-20 3.1E-24 155.2 19.6 216 2-242 154-389 (417)
169 3h7f_A Serine hydroxymethyltra 99.8 6.1E-20 2.1E-24 158.1 18.4 216 2-242 175-414 (447)
170 2oga_A Transaminase; PLP-depen 99.8 2.8E-20 9.6E-25 157.8 15.7 213 2-243 142-397 (399)
171 3acz_A Methionine gamma-lyase; 99.8 1.3E-19 4.5E-24 153.3 19.4 205 2-240 135-387 (389)
172 3cog_A Cystathionine gamma-lya 99.8 2.3E-19 8E-24 152.4 20.9 207 2-242 142-398 (403)
173 1qgn_A Protein (cystathionine 99.8 9E-20 3.1E-24 156.5 18.4 209 2-241 190-444 (445)
174 1wyu_B Glycine dehydrogenase s 99.8 1.6E-20 5.6E-25 162.8 12.8 213 2-241 194-440 (474)
175 3qhx_A Cystathionine gamma-syn 99.8 1.3E-19 4.6E-24 153.4 18.1 208 2-239 142-391 (392)
176 1n8p_A Cystathionine gamma-lya 99.8 9.5E-20 3.2E-24 154.4 17.2 137 3-162 130-276 (393)
177 3gbx_A Serine hydroxymethyltra 99.8 1.5E-19 5E-24 153.9 18.4 217 2-242 159-396 (420)
178 1b9h_A AHBA synthase, protein 99.8 1.6E-19 5.6E-24 152.4 18.0 213 2-241 117-387 (388)
179 1ax4_A Tryptophanase; tryptoph 99.8 1.3E-19 4.5E-24 156.6 17.7 209 12-243 188-442 (467)
180 3mad_A Sphingosine-1-phosphate 99.8 1.4E-19 5E-24 158.3 18.0 218 2-244 230-471 (514)
181 1rv3_A Serine hydroxymethyltra 99.8 1E-18 3.5E-23 151.8 20.0 221 2-241 183-430 (483)
182 2oqx_A Tryptophanase; lyase, p 99.8 1E-19 3.5E-24 157.3 13.4 225 2-243 170-443 (467)
183 1svv_A Threonine aldolase; str 99.8 5.1E-20 1.7E-24 153.4 10.9 203 12-242 150-358 (359)
184 2cb1_A O-acetyl homoserine sul 99.8 2.1E-18 7.3E-23 146.9 20.1 209 2-235 131-409 (412)
185 3mc6_A Sphingosine-1-phosphate 99.8 3.8E-19 1.3E-23 155.0 15.7 216 2-243 197-438 (497)
186 3a9z_A Selenocysteine lyase; P 99.8 2.1E-19 7.2E-24 153.8 13.4 214 2-244 166-430 (432)
187 3nmy_A Xometc, cystathionine g 99.8 1.6E-18 5.6E-23 147.0 16.2 209 2-240 143-397 (400)
188 2fq6_A Cystathionine beta-lyas 99.8 3.2E-18 1.1E-22 145.9 18.0 139 2-164 158-304 (415)
189 3ri6_A O-acetylhomoserine sulf 99.8 2E-18 6.8E-23 147.7 16.8 213 2-239 158-429 (430)
190 3ke3_A Putative serine-pyruvat 99.8 3.8E-18 1.3E-22 143.8 17.5 206 12-243 140-377 (379)
191 3e9k_A Kynureninase; kynurenin 99.8 4.4E-19 1.5E-23 153.4 11.3 200 12-243 219-462 (465)
192 1mdo_A ARNB aminotransferase; 99.8 3.3E-18 1.1E-22 144.5 16.1 212 2-243 118-387 (393)
193 1ohv_A 4-aminobutyrate aminotr 99.8 4.4E-19 1.5E-23 153.7 10.8 200 12-242 263-471 (472)
194 2yky_A Beta-transaminase; tran 99.7 9.7E-21 3.3E-25 163.1 0.0 217 2-243 221-461 (465)
195 3uwc_A Nucleotide-sugar aminot 99.8 4.4E-18 1.5E-22 142.8 15.9 212 2-242 116-371 (374)
196 2po3_A 4-dehydrase; external a 99.8 3.3E-17 1.1E-21 140.0 19.3 217 2-243 129-387 (424)
197 2c81_A Glutamine-2-deoxy-scyll 99.8 5.3E-17 1.8E-21 138.4 18.6 222 2-244 121-416 (418)
198 2dgk_A GAD-beta, GADB, glutama 99.7 7.5E-17 2.5E-21 139.0 17.9 223 2-243 178-435 (452)
199 2qma_A Diaminobutyrate-pyruvat 99.7 4.5E-17 1.6E-21 141.9 15.7 212 12-242 263-496 (497)
200 2okj_A Glutamate decarboxylase 99.7 1.5E-16 5E-21 138.9 18.3 214 12-242 250-502 (504)
201 1js3_A DDC;, DOPA decarboxylas 99.7 6.3E-17 2.2E-21 140.6 15.8 210 12-243 240-475 (486)
202 2fnu_A Aminotransferase; prote 99.7 2.6E-16 9E-21 131.8 19.0 210 2-242 112-372 (375)
203 2ctz_A O-acetyl-L-homoserine s 99.7 5.6E-17 1.9E-21 138.6 14.6 214 2-239 135-420 (421)
204 3frk_A QDTB; aminotransferase, 99.7 7.9E-17 2.7E-21 135.2 14.6 209 2-242 115-368 (373)
205 3dr4_A Putative perosamine syn 99.7 1.3E-16 4.5E-21 134.7 15.6 211 2-239 135-390 (391)
206 2a7v_A Serine hydroxymethyltra 99.7 7.2E-16 2.5E-20 133.5 18.6 220 2-241 193-440 (490)
207 3hbx_A GAD 1, glutamate decarb 99.7 4E-16 1.4E-20 136.1 17.1 224 2-244 193-446 (502)
208 3nyt_A Aminotransferase WBPE; 99.7 5.3E-16 1.8E-20 130.0 15.0 205 2-239 114-361 (367)
209 2z67_A O-phosphoseryl-tRNA(SEC 99.7 2.1E-16 7.1E-21 136.4 12.6 203 12-239 236-455 (456)
210 1wyu_A Glycine dehydrogenase ( 99.7 1.6E-15 5.4E-20 130.2 16.6 196 12-239 201-437 (438)
211 2x3l_A ORN/Lys/Arg decarboxyla 99.7 6E-16 2.1E-20 133.1 13.1 197 12-242 151-353 (446)
212 2jis_A Cysteine sulfinic acid 99.6 9.6E-15 3.3E-19 127.8 18.9 212 12-241 264-514 (515)
213 3vp6_A Glutamate decarboxylase 99.6 2.4E-14 8.2E-19 125.1 17.3 216 12-241 253-504 (511)
214 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.6 6.5E-14 2.2E-18 120.0 18.1 208 2-240 149-434 (437)
215 4e1o_A HDC, histidine decarbox 99.6 2E-14 6.7E-19 124.8 14.9 210 12-244 246-480 (481)
216 4e3q_A Pyruvate transaminase; 99.6 3.4E-14 1.2E-18 122.5 16.1 204 20-245 249-471 (473)
217 3k40_A Aromatic-L-amino-acid d 99.6 2.5E-14 8.6E-19 123.9 15.0 213 12-246 239-475 (475)
218 1o69_A Aminotransferase; struc 99.6 5.5E-14 1.9E-18 118.9 16.8 199 18-241 130-386 (394)
219 1c4k_A Protein (ornithine deca 99.6 1.5E-13 5E-18 124.2 20.2 218 12-243 286-567 (730)
220 4atq_A 4-aminobutyrate transam 99.6 7.2E-14 2.5E-18 120.0 15.0 206 20-242 239-455 (456)
221 4a0g_A Adenosylmethionine-8-am 99.5 1.7E-15 5.9E-20 138.6 3.9 206 17-242 605-828 (831)
222 3ht4_A Aluminum resistance pro 99.5 1.4E-13 5E-18 117.6 15.5 159 2-181 156-330 (431)
223 3i16_A Aluminum resistance pro 99.5 1.5E-13 5E-18 117.2 14.4 154 2-181 165-341 (427)
224 3jzl_A Putative cystathionine 99.5 1.4E-13 4.8E-18 116.8 14.0 139 2-164 150-304 (409)
225 3ju7_A Putative PLP-dependent 99.5 3.2E-13 1.1E-17 113.6 15.0 196 16-242 135-375 (377)
226 4ao9_A Beta-phenylalanine amin 99.5 2.3E-13 7.7E-18 116.6 13.4 202 20-244 233-448 (454)
227 2vyc_A Biodegradative arginine 99.5 7.6E-13 2.6E-17 120.3 16.8 215 12-242 317-605 (755)
228 3hvy_A Cystathionine beta-lyas 99.5 1.3E-12 4.5E-17 111.3 15.7 153 2-180 165-340 (427)
229 3b8x_A WBDK, pyridoxamine 5-ph 99.4 2.1E-11 7.1E-16 102.7 16.4 205 2-235 119-389 (390)
230 3e77_A Phosphoserine aminotran 99.3 1.1E-10 3.9E-15 97.7 15.9 204 13-242 158-375 (377)
231 3qm2_A Phosphoserine aminotran 99.3 6.3E-10 2.2E-14 93.6 18.6 210 3-242 158-385 (386)
232 3m5u_A Phosphoserine aminotran 99.2 6E-10 2E-14 92.9 14.9 195 12-242 145-360 (361)
233 3n75_A LDC, lysine decarboxyla 99.1 3E-09 1E-13 95.7 16.2 209 12-241 302-559 (715)
234 3ou5_A Serine hydroxymethyltra 99.0 1.6E-07 5.5E-12 79.3 20.2 198 28-240 219-439 (490)
235 3hl2_A O-phosphoseryl-tRNA(SEC 98.9 2.2E-07 7.6E-12 78.7 17.6 205 27-245 233-464 (501)
236 3bc8_A O-phosphoseryl-tRNA(SEC 98.6 2E-06 6.9E-11 73.2 15.6 217 12-244 202-445 (450)
237 2yl5_A Beta-N-acetylhexosamini 65.0 5.2 0.00018 33.8 3.6 28 18-45 86-113 (442)
238 2yl6_A Beta-N-acetylhexosamini 62.8 5.2 0.00018 33.8 3.2 28 18-45 83-110 (434)
239 1hjs_A Beta-1,4-galactanase; 4 61.3 10 0.00036 30.6 4.7 36 17-52 50-85 (332)
240 2ya0_A Putative alkaline amylo 59.0 7.3 0.00025 35.1 3.7 28 26-53 254-281 (714)
241 1fob_A Beta-1,4-galactanase; B 57.8 15 0.00051 29.6 5.1 36 17-52 50-85 (334)
242 4gqr_A Pancreatic alpha-amylas 56.2 8.4 0.00029 32.5 3.5 30 24-53 74-103 (496)
243 2ya1_A Putative alkaline amylo 52.1 10 0.00035 35.7 3.6 28 26-53 561-588 (1014)
244 1lwj_A 4-alpha-glucanotransfer 51.8 15 0.0005 30.8 4.2 30 24-53 67-96 (441)
245 1g94_A Alpha-amylase; beta-alp 51.3 12 0.00041 31.5 3.6 30 25-54 63-92 (448)
246 2kfp_A Pspto_3016 protein; alp 51.0 42 0.0014 22.7 5.7 39 194-234 71-111 (125)
247 1ht6_A AMY1, alpha-amylase iso 50.2 16 0.00055 30.3 4.2 33 22-54 64-96 (405)
248 3bzy_B ESCU; auto cleavage pro 49.9 11 0.00038 23.7 2.4 24 27-50 27-50 (83)
249 2e8y_A AMYX protein, pullulana 49.2 11 0.00038 34.0 3.2 29 26-54 315-343 (718)
250 3rcn_A Beta-N-acetylhexosamini 48.8 14 0.00046 32.2 3.6 28 18-45 215-242 (543)
251 1gcy_A Glucan 1,4-alpha-maltot 48.5 18 0.00062 31.2 4.4 32 24-55 90-121 (527)
252 1wza_A Alpha-amylase A; hydrol 48.0 17 0.00059 30.9 4.1 29 25-53 80-108 (488)
253 1mxg_A Alpha amylase; hyperthe 48.0 18 0.00061 30.3 4.1 30 24-53 84-113 (435)
254 2z1k_A (NEO)pullulanase; hydro 47.7 18 0.0006 30.6 4.1 30 24-53 94-123 (475)
255 2dh2_A 4F2 cell-surface antige 47.5 18 0.00062 30.2 4.1 29 25-53 80-108 (424)
256 1yht_A DSPB; beta barrel, hydr 47.1 15 0.00053 30.1 3.5 25 21-45 89-113 (367)
257 4aie_A Glucan 1,6-alpha-glucos 47.0 17 0.00057 31.3 3.9 30 24-53 77-106 (549)
258 2guy_A Alpha-amylase A; (beta- 46.7 17 0.00059 30.7 3.9 31 24-54 95-125 (478)
259 1wzl_A Alpha-amylase II; pullu 45.6 19 0.00066 31.5 4.1 32 22-53 215-246 (585)
260 2aaa_A Alpha-amylase; glycosid 45.6 20 0.00067 30.5 4.1 32 23-54 94-125 (484)
261 1jae_A Alpha-amylase; glycosid 45.4 17 0.00058 30.8 3.7 31 25-55 73-103 (471)
262 1b93_A Protein (methylglyoxal 45.2 21 0.0007 25.3 3.4 43 4-47 74-120 (152)
263 1ud2_A Amylase, alpha-amylase; 44.9 16 0.00056 30.9 3.5 31 23-53 77-107 (480)
264 1j0h_A Neopullulanase; beta-al 44.7 23 0.00078 31.0 4.5 32 22-53 218-249 (588)
265 1ea9_C Cyclomaltodextrinase; h 44.4 27 0.00093 30.5 4.9 32 22-53 214-245 (583)
266 1hvx_A Alpha-amylase; hydrolas 44.4 17 0.00057 31.3 3.5 31 23-53 78-108 (515)
267 3bh4_A Alpha-amylase; calcium, 44.2 17 0.00058 30.9 3.5 31 23-53 75-105 (483)
268 1ua7_A Alpha-amylase; beta-alp 44.0 20 0.00068 29.8 3.8 31 25-55 73-103 (422)
269 1m7x_A 1,4-alpha-glucan branch 44.0 27 0.00092 30.8 4.8 37 19-55 197-233 (617)
270 1wpc_A Glucan 1,4-alpha-maltoh 43.5 18 0.00061 30.8 3.5 31 23-53 79-109 (485)
271 2wc7_A Alpha amylase, catalyti 43.4 17 0.0006 30.8 3.4 29 25-53 101-129 (488)
272 2vt1_B Surface presentation of 43.2 16 0.00055 23.5 2.4 24 27-50 27-50 (93)
273 1zja_A Trehalulose synthase; s 42.4 22 0.00074 30.9 3.9 31 23-53 76-106 (557)
274 2gjx_A Beta-hexosaminidase alp 42.2 22 0.00075 30.6 3.9 27 19-45 207-233 (507)
275 3t7y_A YOP proteins translocat 41.1 16 0.00053 23.8 2.1 23 28-50 43-65 (97)
276 1m53_A Isomaltulose synthase; 41.0 24 0.0008 30.8 3.9 30 24-53 90-119 (570)
277 3m05_A Uncharacterized protein 40.4 9.1 0.00031 25.7 0.9 52 190-241 17-71 (114)
278 3c01_E Surface presentation of 40.1 17 0.00057 23.7 2.1 24 27-50 27-50 (98)
279 3dhu_A Alpha-amylase; structur 39.8 22 0.00075 29.8 3.5 29 25-53 82-110 (449)
280 1uok_A Oligo-1,6-glucosidase; 39.8 25 0.00086 30.5 3.9 30 24-53 76-105 (558)
281 2xw6_A MGS, methylglyoxal synt 39.7 13 0.00043 25.8 1.6 42 4-46 66-111 (134)
282 2bhu_A Maltooligosyltrehalose 39.7 32 0.0011 30.3 4.6 34 22-55 188-221 (602)
283 2gjh_A Designed protein; oblig 39.0 49 0.0017 18.2 4.5 28 215-242 2-30 (62)
284 3m07_A Putative alpha amylase; 38.9 36 0.0012 30.1 4.8 34 22-55 198-231 (618)
285 4aef_A Neopullulanase (alpha-a 38.6 27 0.00091 31.0 3.9 31 22-52 281-311 (645)
286 3edf_A FSPCMD, cyclomaltodextr 38.4 29 0.001 30.4 4.1 31 23-53 195-225 (601)
287 3aj7_A Oligo-1,6-glucosidase; 38.0 28 0.00095 30.5 3.9 30 24-53 85-114 (589)
288 3k1d_A 1,4-alpha-glucan-branch 37.6 33 0.0011 31.0 4.4 37 19-55 305-341 (722)
289 1vmd_A MGS, methylglyoxal synt 36.4 24 0.0008 25.7 2.6 42 4-46 90-135 (178)
290 2zic_A Dextran glucosidase; TI 36.4 28 0.00094 30.1 3.6 29 25-53 77-105 (543)
291 2ze0_A Alpha-glucosidase; TIM 36.1 29 0.00099 30.1 3.7 29 25-53 77-105 (555)
292 1jak_A Beta-N-acetylhexosamini 36.0 32 0.0011 29.6 3.9 25 21-45 225-249 (512)
293 1wwh_A Nucleoporin 35, nucleop 35.9 49 0.0017 22.3 4.0 47 150-205 37-83 (119)
294 2ki0_A DS119; beta-alpha-beta, 35.4 24 0.00081 17.3 1.7 20 24-43 12-31 (36)
295 3aml_A OS06G0726400 protein; s 34.7 35 0.0012 31.0 4.1 36 20-55 244-279 (755)
296 3vgf_A Malto-oligosyltrehalose 34.6 28 0.00096 30.3 3.4 32 24-55 165-196 (558)
297 4aee_A Alpha amylase, catalyti 34.6 30 0.001 31.0 3.7 31 23-53 308-338 (696)
298 3bc9_A AMYB, alpha amylase, ca 34.4 29 0.001 30.5 3.5 31 23-53 205-235 (599)
299 3gh5_A HEX1, beta-hexosaminida 34.3 33 0.0011 29.7 3.7 26 20-45 249-274 (525)
300 1qho_A Alpha-amylase; glycosid 34.3 29 0.00098 31.1 3.5 31 23-53 104-134 (686)
301 1d3c_A Cyclodextrin glycosyltr 33.9 29 0.001 31.0 3.5 31 23-53 112-142 (686)
302 3bmv_A Cyclomaltodextrin gluca 33.8 29 0.001 31.0 3.5 31 23-53 113-143 (683)
303 2vr5_A Glycogen operon protein 33.7 51 0.0017 29.7 5.0 30 26-55 266-295 (718)
304 1cyg_A Cyclodextrin glucanotra 33.4 30 0.001 30.9 3.5 31 23-53 108-138 (680)
305 3pzt_A Endoglucanase; alpha/be 33.3 27 0.00093 28.0 2.9 23 26-48 104-126 (327)
306 1bf2_A Isoamylase; hydrolase, 32.8 59 0.002 29.4 5.3 29 26-54 272-300 (750)
307 1bqc_A Protein (beta-mannanase 32.2 36 0.0012 26.6 3.4 24 25-48 63-86 (302)
308 2wsk_A Glycogen debranching en 32.0 34 0.0012 30.4 3.5 31 25-55 240-270 (657)
309 2whl_A Beta-mannanase, baman5; 31.9 32 0.0011 26.8 3.1 24 25-48 62-85 (294)
310 2r2a_A Uncharacterized protein 31.8 16 0.00055 27.0 1.2 27 27-53 75-101 (199)
311 7a3h_A Endoglucanase; hydrolas 31.4 31 0.001 27.2 2.9 24 26-49 79-102 (303)
312 1ji1_A Alpha-amylase I; beta/a 31.1 49 0.0017 29.3 4.4 34 22-55 234-271 (637)
313 3vup_A Beta-1,4-mannanase; TIM 31.0 34 0.0012 26.6 3.1 21 27-47 90-110 (351)
314 1now_A Beta-hexosaminidase bet 30.9 38 0.0013 29.1 3.5 25 21-45 214-238 (507)
315 1tvn_A Cellulase, endoglucanas 30.5 36 0.0012 26.5 3.1 22 27-48 79-100 (293)
316 2wan_A Pullulanase; hydrolase, 30.4 48 0.0017 30.9 4.4 30 26-55 531-560 (921)
317 3czg_A Sucrose hydrolase; (alp 30.1 35 0.0012 30.3 3.3 30 24-53 153-182 (644)
318 2fki_A Protein YJBR; NESG, GFT 30.0 1.3E+02 0.0043 20.2 5.5 49 190-239 53-103 (126)
319 2a1v_A Conserved hypothetical 29.7 1.4E+02 0.0048 20.6 7.3 49 190-238 64-114 (144)
320 1g5a_A Amylosucrase; glycosylt 29.5 40 0.0014 29.8 3.5 30 24-53 160-189 (628)
321 3b1s_B Flagellar biosynthetic 34.5 12 0.00042 23.7 0.0 27 28-54 28-54 (87)
322 3jug_A Beta-mannanase; TIM-bar 28.4 36 0.0012 27.6 2.8 25 25-49 85-109 (345)
323 1g01_A Endoglucanase; alpha/be 28.2 40 0.0014 27.3 3.1 23 27-49 90-112 (364)
324 1gjw_A Maltodextrin glycosyltr 28.2 46 0.0016 29.4 3.7 30 26-55 181-210 (637)
325 2keb_A DNA polymerase subunit 28.2 43 0.0015 21.7 2.5 21 21-41 39-59 (101)
326 1c7s_A Beta-N-acetylhexosamini 28.0 44 0.0015 30.9 3.5 27 19-45 392-418 (858)
327 1egz_A Endoglucanase Z, EGZ, C 27.8 43 0.0015 26.0 3.1 21 27-47 77-97 (291)
328 2jli_A YSCU, YOP proteins tran 27.6 34 0.0012 23.2 2.1 23 28-50 72-94 (123)
329 3ayr_A Endoglucanase; TIM barr 27.3 56 0.0019 26.6 3.9 25 26-50 102-126 (376)
330 3pg6_A E3 ubiquitin-protein li 26.9 67 0.0023 22.7 3.5 28 214-241 75-102 (159)
331 4hty_A Cellulase; (alpha/beta) 26.8 44 0.0015 27.0 3.1 23 26-48 120-142 (359)
332 2fcj_A Small toprim domain pro 26.8 26 0.00088 23.7 1.4 27 24-50 36-62 (119)
333 3bzs_A ESCU; auto cleavage pro 26.7 35 0.0012 23.6 2.1 23 28-50 82-104 (137)
334 3zss_A Putative glucanohydrola 26.6 48 0.0017 29.8 3.5 26 25-50 319-344 (695)
335 3n9k_A Glucan 1,3-beta-glucosi 26.6 45 0.0015 27.6 3.1 24 25-48 111-134 (399)
336 2cks_A Endoglucanase E-5; carb 26.0 43 0.0015 26.3 2.8 22 27-48 80-101 (306)
337 1ur4_A Galactanase; hydrolase, 25.8 1.1E+02 0.0038 25.3 5.3 30 24-53 86-115 (399)
338 3ozo_A N-acetylglucosaminidase 25.7 54 0.0018 28.7 3.5 25 21-45 250-274 (572)
339 3faw_A Reticulocyte binding pr 25.6 89 0.0031 28.9 5.2 28 26-53 369-396 (877)
340 3ucq_A Amylosucrase; thermosta 25.4 51 0.0018 29.3 3.5 31 23-53 157-187 (655)
341 2jlj_A YSCU, YOP proteins tran 25.0 39 0.0013 23.6 2.1 23 28-50 81-103 (144)
342 1h4p_A Glucan 1,3-beta-glucosi 24.9 50 0.0017 27.4 3.1 25 25-49 112-136 (408)
343 4aio_A Limit dextrinase; hydro 24.8 71 0.0024 29.3 4.4 29 27-55 379-407 (884)
344 1qnr_A Endo-1,4-B-D-mannanase; 24.4 48 0.0016 26.3 2.9 23 26-48 89-111 (344)
345 3q8j_A Asteropsin A, ABU8-1; c 23.9 12 0.00039 18.5 -0.6 13 12-24 23-35 (37)
346 3o63_A Probable thiamine-phosp 23.8 61 0.0021 24.7 3.2 20 30-49 86-105 (243)
347 3k8k_A Alpha-amylase, SUSG; al 23.4 87 0.003 28.0 4.5 31 23-53 103-133 (669)
348 1h1n_A Endo type cellulase ENG 23.3 58 0.002 25.5 3.1 23 27-49 72-94 (305)
349 1wky_A Endo-beta-1,4-mannanase 23.3 61 0.0021 27.4 3.4 24 25-48 70-93 (464)
350 3qr3_A Endoglucanase EG-II; TI 23.0 59 0.002 26.2 3.1 24 27-50 84-107 (340)
351 3nco_A Endoglucanase fncel5A; 22.9 70 0.0024 25.2 3.6 24 26-49 81-104 (320)
352 1ceo_A Cellulase CELC; glycosy 22.9 59 0.002 25.8 3.1 24 27-50 69-92 (343)
353 3aie_A Glucosyltransferase-SI; 22.5 81 0.0028 29.1 4.2 31 23-53 689-719 (844)
354 2epl_X N-acetyl-beta-D-glucosa 22.1 73 0.0025 28.2 3.7 26 20-45 138-163 (627)
355 3mm5_A Sulfite reductase, diss 22.0 32 0.0011 28.8 1.4 25 16-40 100-124 (418)
356 2c0h_A Mannan endo-1,4-beta-ma 21.9 63 0.0021 25.7 3.1 21 27-47 91-111 (353)
357 3pzg_A Mannan endo-1,4-beta-ma 21.8 81 0.0028 25.9 3.8 23 26-48 99-121 (383)
358 1qwg_A PSL synthase;, (2R)-pho 21.5 70 0.0024 24.6 3.1 35 20-54 48-82 (251)
359 1ece_A Endocellulase E1; glyco 21.4 65 0.0022 25.7 3.1 24 26-49 94-117 (358)
360 1qys_A TOP7; alpha-beta, novel 21.4 1.5E+02 0.0051 18.1 4.3 29 214-242 45-74 (106)
361 3or1_A Sulfite reductase alpha 21.1 34 0.0012 28.8 1.4 25 16-40 102-126 (437)
362 3h74_A Pyridoxal kinase; PSI-I 20.9 92 0.0032 24.2 3.8 31 20-50 80-111 (282)
363 3b0z_B Flagellar biosynthetic 26.2 21 0.00071 23.9 0.0 27 28-54 28-54 (114)
364 4go7_X Aspartokinase; transfer 20.4 75 0.0026 23.5 3.0 46 191-240 132-177 (200)
365 3ttq_A Dextransucrase; (beta/a 20.2 75 0.0026 30.1 3.5 30 24-53 910-939 (1108)
366 1iv8_A Maltooligosyl trehalose 20.2 59 0.002 29.3 2.8 29 25-53 64-92 (720)
367 3ndz_A Endoglucanase D; cellot 20.1 66 0.0022 25.9 2.9 25 27-51 83-107 (345)
No 1
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=2e-37 Score=265.80 Aligned_cols=240 Identities=28% Similarity=0.537 Sum_probs=199.8
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..++...++++++|+
T Consensus 182 ~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~ 261 (427)
T 3dyd_A 182 KQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGL 261 (427)
T ss_dssp HHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEES
T ss_pred HHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeec
Confidence 3445555433 889999999999999999999999999999999999999999987767677777766789999999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRL 157 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 157 (246)
||.|+++|+|+||+++++....+. +++++.+......+++++++.|.++..+|+.....++++.++.++++++.+.+.|
T Consensus 262 sK~~~~~G~riG~~~~~~~~~~~~-~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L 340 (427)
T 3dyd_A 262 AKRWLVPGWRLGWILIHDRRDIFG-NEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGAL 340 (427)
T ss_dssp TTTSSCGGGCCEEEEEECSTTSSH-HHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCcCcceEEEEecCcchhhH-HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999986311110 1567777665433458999999999999996557889999999999999999999
Q ss_pred hcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHHHH
Q 042445 158 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRMKA 237 (246)
Q Consensus 158 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l~~ 237 (246)
+++|++. +..|++|+|+|++++...+++..++.+++..+++++||.+.||..|+.++++|++++.+++++++++++|.+
T Consensus 341 ~~~~g~~-~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~i~~~l~~l~~ 419 (427)
T 3dyd_A 341 AAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQE 419 (427)
T ss_dssp HHSTTEE-EECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHHHHHHH
T ss_pred hcCCCce-ecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHHHHHHHHHHHH
Confidence 9988886 568899999999887543322234677777777899999999999988999999999899999999999999
Q ss_pred HHHHHh
Q 042445 238 FYDRHA 243 (246)
Q Consensus 238 ~~~~~~ 243 (246)
+++++.
T Consensus 420 ~l~~~~ 425 (427)
T 3dyd_A 420 FCEQHY 425 (427)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 998765
No 2
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=4.3e-36 Score=257.38 Aligned_cols=216 Identities=19% Similarity=0.275 Sum_probs=184.4
Q ss_pred ccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEEE
Q 042445 13 SDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLV 92 (246)
Q Consensus 13 ~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i~ 92 (246)
.++||||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..++..+++++++||||.|+ +|+|+||++
T Consensus 197 ~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~ 275 (425)
T 2r2n_A 197 VPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLT 275 (425)
T ss_dssp CCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEE
T ss_pred CCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEe
Confidence 3688999999999999999999999999999999999999988766666666766678999999999997 999999999
Q ss_pred eeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhc----hHHHHHHHHHHHHHHHHHHHHHhhc-CCCCccc
Q 042445 93 TSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKT----EEEFFSKIIDILRETADKCCDRLKE-IPCITCP 166 (246)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~ 166 (246)
+++ ++++.+..... .+.++|++.|.++..+|+.. ...++++.++.++++++.+.+.|++ ++++..+
T Consensus 276 ~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 347 (425)
T 2r2n_A 276 GPK--------PLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEW 347 (425)
T ss_dssp EEH--------HHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred cCH--------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEE
Confidence 998 99998887643 34578999999999999852 1478899999999999999999987 6776435
Q ss_pred cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC-----CCeEEEEee-cChHHHHHHHHHHHHHHH
Q 042445 167 KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-----KDWLRITFA-VEPSALENGLGRMKAFYD 240 (246)
Q Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----~~~iRls~~-~~~~~l~~~~~~l~~~~~ 240 (246)
..|++|+|+|++++... ++.+++.+.+.++||.+.||..|+. .+++|++++ .+++++++++++|.++++
T Consensus 348 ~~p~~g~~~~~~~~~~~-----~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 348 HVPAAGMFLWIKVKGIN-----DVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIK 422 (425)
T ss_dssp CCCSBSSEEEEEETTCS-----CCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHH
T ss_pred eCCCceEEEEEEeCCCC-----CHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 67899999999997532 3455566778899999999998864 479999998 599999999999999987
Q ss_pred HH
Q 042445 241 RH 242 (246)
Q Consensus 241 ~~ 242 (246)
+.
T Consensus 423 ~~ 424 (425)
T 2r2n_A 423 ES 424 (425)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 3
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=7e-36 Score=257.70 Aligned_cols=217 Identities=21% Similarity=0.349 Sum_probs=184.8
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.++|.+++++|+++|++||++||+||+|.++.+++..+.++..++..+++++++||||.|+ +|+|+||+
T Consensus 222 ~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v 300 (448)
T 3aow_A 222 TVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWM 300 (448)
T ss_dssp ECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEE
T ss_pred ECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEE
Confidence 46899999999999999999999999999999999999999988766667767766678999999999998 99999999
Q ss_pred EeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhc-CC-CCcccc
Q 042445 92 VTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTE-EEFFSKIIDILRETADKCCDRLKE-IP-CITCPK 167 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~~~ 167 (246)
++++ ++++.+..... .+.++|++.|.++.++|+... +.++++.++.++++++.+.+.|++ +| ++. +.
T Consensus 301 ~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~-~~ 371 (448)
T 3aow_A 301 VGDP--------GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVK-WT 371 (448)
T ss_dssp EECH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE-EC
T ss_pred EeCH--------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE-Ee
Confidence 9998 99998877643 344779999999999998653 688999999999999999999987 67 576 56
Q ss_pred CCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC----CCeEEEEeec-ChHHHHHHHHHHHHHHHHH
Q 042445 168 KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KDWLRITFAV-EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~iRls~~~-~~~~l~~~~~~l~~~~~~~ 242 (246)
.|++|+|+|++++... +..+++.. |.++||.+.||..|+. ++++|++++. +++++++++++|.+++++.
T Consensus 372 ~p~~g~~~~v~~~~~~-----~~~~l~~~-l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 372 KPEGGMFIWVTLPDGI-----DSKKMLER-AIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp CCSBSSEEEEECSTTC-----CHHHHHHH-HHHTTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHHH
T ss_pred CCCccEEEEEEcCCCC-----CHHHHHHH-HHHCCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 7899999999987431 34555555 5566999999998853 6899999997 7999999999999999876
Q ss_pred hh
Q 042445 243 AE 244 (246)
Q Consensus 243 ~~ 244 (246)
.+
T Consensus 446 ~~ 447 (448)
T 3aow_A 446 LK 447 (448)
T ss_dssp HC
T ss_pred Hh
Confidence 54
No 4
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=2.2e-36 Score=255.94 Aligned_cols=221 Identities=18% Similarity=0.305 Sum_probs=183.1
Q ss_pred hhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccc
Q 042445 3 LINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSIS 78 (246)
Q Consensus 3 ~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 78 (246)
.+++.++++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++ .+.++..+.+ +++++++|||
T Consensus 156 ~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~S 233 (385)
T 1b5p_A 156 RVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAA 233 (385)
T ss_dssp HHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEEST
T ss_pred HHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEech
Confidence 455555433 788999999999999999999999999999999999999998876 4555555655 7899999999
Q ss_pred cccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhh-cCCCCchHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHHHHH
Q 042445 79 KRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNI-SSDPATFIQGAVPQILEKT--EEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 79 K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~ 155 (246)
|.|+++|+|+||+++++ ++++.+...... +.+++.+.|.++.++|+.. ...++++.++.++++++.+.+
T Consensus 234 K~~~~~G~RiG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 305 (385)
T 1b5p_A 234 KAFAMTGWRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLE 305 (385)
T ss_dssp TTTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCcccceEEEEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988 898888876443 3478999999999999741 246789999999999999999
Q ss_pred HhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHH
Q 042445 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRM 235 (246)
Q Consensus 156 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l 235 (246)
.|+++ |+. +..|++++|+|+.++... . +..++... |.++||.+.||..|+.++++|+|++.+++++++++++|
T Consensus 306 ~L~~~-g~~-~~~~~~~~~~~~~~~~~~---~-~~~~l~~~-l~~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~~l~~l 378 (385)
T 1b5p_A 306 GLTAL-GLK-AVRPSGAFYVLMDTSPIA---P-DEVRAAER-LLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERF 378 (385)
T ss_dssp HHHHH-TCC-BCCCSBTTEEEEECTTTC---S-SHHHHHHH-HHHTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHG
T ss_pred HHHHC-CCe-ecCCCeeEEEEEecCCCC---C-CHHHHHHH-HHHCCeEEecccccCCCCeEEEEecCCHHHHHHHHHHH
Confidence 99987 776 567889999999886311 1 35555555 44999999999999778999999998889999999999
Q ss_pred HHHHH
Q 042445 236 KAFYD 240 (246)
Q Consensus 236 ~~~~~ 240 (246)
.++++
T Consensus 379 ~~~l~ 383 (385)
T 1b5p_A 379 ARVLG 383 (385)
T ss_dssp GGGC-
T ss_pred HHHHh
Confidence 87764
No 5
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.4e-35 Score=253.19 Aligned_cols=240 Identities=29% Similarity=0.480 Sum_probs=190.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCC----CCccccccCCcccEEE
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNT----PFVSMGVFGSIVPLLT 73 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~----~~~~~~~~~~~~~~i~ 73 (246)
+.+++.++++ ++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. .+.++..++..+++++
T Consensus 168 ~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~ 247 (416)
T 1bw0_A 168 DEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVI 247 (416)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEE
T ss_pred HHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEE
Confidence 3455555433 7889999999999999999999999999999999999999988765 4555555555557899
Q ss_pred EcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 74 LGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 74 ~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
++|+||.|+++|+|+||+++++...+.. .+...++......+++|++.|.++..+|+...+.++++.++.++++++.+
T Consensus 248 ~~s~sK~~~~~Glr~G~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 325 (416)
T 1bw0_A 248 LGGTAKNLVVPGWRLGWLLYVDPHGNGP--SFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYL 325 (416)
T ss_dssp EEESTTTTSCGGGCCEEEEEECTTCSCH--HHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred EecchhhCCCCCceEEEEEeeCchhhHH--HHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987211221 24434443322334789999999999998544778899999999999999
Q ss_pred HHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHH
Q 042445 154 CDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLG 233 (246)
Q Consensus 154 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~ 233 (246)
.+.|++++++. +..|++|+|+|++++...+++..+..+++..+++++||.+.||..|+.++++|++++.++++++++++
T Consensus 326 ~~~L~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~~e~l~~~l~ 404 (416)
T 1bw0_A 326 YNHIGECIGLA-PTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVE 404 (416)
T ss_dssp HHHHTTSTTEE-ECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHH
T ss_pred HHHHHhCCCCc-ccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCCHHHHHHHHH
Confidence 99999887877 45788899999988643211111355666666678999999999998789999999888999999999
Q ss_pred HHHHHHHHHhh
Q 042445 234 RMKAFYDRHAE 244 (246)
Q Consensus 234 ~l~~~~~~~~~ 244 (246)
+|.+++++..+
T Consensus 405 ~l~~~l~~~~~ 415 (416)
T 1bw0_A 405 RIKAFCQRHAA 415 (416)
T ss_dssp HHHHHHHHHBC
T ss_pred HHHHHHHHhhc
Confidence 99999987654
No 6
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.4e-36 Score=260.55 Aligned_cols=224 Identities=21% Similarity=0.217 Sum_probs=183.3
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCC-CCccccccC--------CcccEEEEccccccc-
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNT-PFVSMGVFG--------SIVPLLTLGSISKRG- 81 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~--------~~~~~i~~~s~sK~~- 81 (246)
+++|||||||.++|.+++++|+++|++||+++|+||+|.++.+++. .+.++..+. ...++++++||||.|
T Consensus 240 ~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 319 (498)
T 3ihj_A 240 CIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYM 319 (498)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTT
T ss_pred EEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccc
Confidence 7789999999999999999999999999999999999999999753 455554432 223589999999999
Q ss_pred ccCCceEEEEEe---eCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhc------hH---HHHHHHHHHHHHH
Q 042445 82 IVPGLRLGWLVT---SDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKT------EE---EFFSKIIDILRET 149 (246)
Q Consensus 82 ~~~g~r~G~i~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~------~~---~~~~~~~~~~~~~ 149 (246)
|++|+|+||++. ++ ++++.+........+++.+.|.++..+++.. -+ .+..+.++.++++
T Consensus 320 G~~G~R~G~~~~~~~~~--------~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~ 391 (498)
T 3ihj_A 320 GECGYRGGYMEVINLHP--------EIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKK 391 (498)
T ss_dssp CCSSSCCEEEEEESCCH--------HHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cCcccceEEEEEecCCH--------HHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHH
Confidence 789999999984 55 8888888776666688999999999999741 12 3456778899999
Q ss_pred HHHHHHHhhcCCCCccccCCCCceEEEEEecccc--c-----cCCCChHH-HHHHHHHhcCeEEecCCCcCC---CCeEE
Q 042445 150 ADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSL--L-----EGINSDME-FALKLAKEESVIVLPGITVGL---KDWLR 218 (246)
Q Consensus 150 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~--~-----~~~~~~~~-~~~~ll~~~gi~v~pg~~f~~---~~~iR 218 (246)
++.+.+.|++++|+. +..|++|+|+|++++.+. . .+. ++.+ ++.++|+++||.+.||..|+. ++++|
T Consensus 392 ~~~l~~~L~~~~g~~-~~~p~gg~~~~~~l~~p~~~~~~~~~~g~-~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~R 469 (498)
T 3ihj_A 392 AKLTEDLFNQVPGIH-CNPLQGAMYAFPRIFIPAKAVEAAQAHQM-APDMFYCMKLLEETGICVVPGSGFGQREGTYHFR 469 (498)
T ss_dssp HHHHHHHHHTSTTEE-CCCCCBSSEECCEECCCHHHHHHHHHTTS-CHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEE
T ss_pred HHHHHHHHhcCCCcE-ecCCCeEEEEEEeccCchhhhHHHHhcCC-CcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEE
Confidence 999999999988887 578999999998775321 0 012 2333 378889999999999999984 56999
Q ss_pred EEeecChHHHHHHHHHHHHHHHHHhhc
Q 042445 219 ITFAVEPSALENGLGRMKAFYDRHAEK 245 (246)
Q Consensus 219 ls~~~~~~~l~~~~~~l~~~~~~~~~~ 245 (246)
++++.+++++++++++|.++++++.++
T Consensus 470 is~~~~~e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 470 MTILPPVEKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp EECCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999889999999999999999887653
No 7
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.9e-35 Score=258.22 Aligned_cols=224 Identities=19% Similarity=0.215 Sum_probs=183.6
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCC-CCCccccc----c---CCcccEEEEccccccc-c
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGN-TPFVSMGV----F---GSIVPLLTLGSISKRG-I 82 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~----~---~~~~~~i~~~s~sK~~-~ 82 (246)
+++|||||||.++|.+++++|+++|+++|+++|+||+|.++.+++ ..+.++.. + ....++++++||||.| |
T Consensus 242 vl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 321 (500)
T 3tcm_A 242 VVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYG 321 (500)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTC
T ss_pred EEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCC
Confidence 788999999999999999999999999999999999999999864 34445432 2 2334689999999998 8
Q ss_pred cCCceEEEEEe---eCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhc---------hHHHHHHHHHHHHHHH
Q 042445 83 VPGLRLGWLVT---SDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKT---------EEEFFSKIIDILRETA 150 (246)
Q Consensus 83 ~~g~r~G~i~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~---------~~~~~~~~~~~~~~~~ 150 (246)
++|+|+||+++ ++ ++++.+.......+++++++|.++..+++.. ...++.+.++.+++++
T Consensus 322 ~~G~R~G~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 393 (500)
T 3tcm_A 322 ECGKRGGYFEITGFSA--------PVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRA 393 (500)
T ss_dssp CGGGCCEEEEEESCCT--------THHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccceEEEEEeCCCH--------HHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 55 8888888776655688999999999999732 2356788888999999
Q ss_pred HHHHHHhhcCCCCccccCCCCceEEEEEecccc-------ccCCCChHHHHHHHHHhcCeEEecCCCcCC---CCeEEEE
Q 042445 151 DKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSL-------LEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRIT 220 (246)
Q Consensus 151 ~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~iRls 220 (246)
+.+.+.|++++|+. +..|++|+|+|+++..+. ..+..++..++.++|+++||.+.||..|+. ++++|++
T Consensus 394 ~~l~~~L~~~~g~~-~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis 472 (500)
T 3tcm_A 394 KALEHAFNKLEGIT-CNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCT 472 (500)
T ss_dssp HHHHHHHHTSTTEE-CCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEE
T ss_pred HHHHHHHhcCCCcE-EecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEE
Confidence 99999999988888 578999999997664321 001212344567889899999999999984 5689999
Q ss_pred eecChHHHHHHHHHHHHHHHHHhh
Q 042445 221 FAVEPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 221 ~~~~~~~l~~~~~~l~~~~~~~~~ 244 (246)
++.+++++++++++|.++++++.+
T Consensus 473 ~~~~~e~i~~~i~~l~~~~~~~~~ 496 (500)
T 3tcm_A 473 ILPQEDKIPAVISRFTVFHEAFMS 496 (500)
T ss_dssp SCSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHHHHHHHHH
Confidence 998889999999999999987764
No 8
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=3.8e-35 Score=247.19 Aligned_cols=227 Identities=15% Similarity=0.194 Sum_probs=190.8
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCC-CCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGN-TPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.++++ ++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ ..+.++..+...++++++.|
T Consensus 141 ~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s 220 (377)
T 3fdb_A 141 HDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITA 220 (377)
T ss_dssp HHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEEC
T ss_pred HHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEe
Confidence 4556655543 889999999999999999999999999999999999999999887 55556655555678999999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
+||.+|++|+|+||+++++. ++++.+..... .++++|++.|.++..++... +.++++.++.++++++.+.+
T Consensus 221 ~sK~~g~~G~r~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~ 292 (377)
T 3fdb_A 221 PSKAWNIAGLKCAQIIFSNP-------SDAEHWQQLSPVIKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLH 292 (377)
T ss_dssp STTTTTCGGGCCEEEECCSH-------HHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHH
T ss_pred ChHhccCcchhheEEEeCCH-------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988542 78888876633 34588999999999999853 67889999999999999999
Q ss_pred Hhhc-CCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHH
Q 042445 156 RLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGL 232 (246)
Q Consensus 156 ~L~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~ 232 (246)
.|++ +|++. +..|.+++++|++++.... +.+++..+++++||.+.||..|+. ++++|++++.+++++++++
T Consensus 293 ~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l 366 (377)
T 3fdb_A 293 EIPKRIPGAK-ITPMQATYLMWIDFRDTTI-----EGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAI 366 (377)
T ss_dssp HHHHHSTTCE-ECCCSBCSEEEEECTTSCC-----CSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHH
T ss_pred HHHhhCCCce-EecCCeeEEEEEECcccCC-----CHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHH
Confidence 9998 88887 5688999999998875321 345667777777999999999886 7999999999999999999
Q ss_pred HHHHHHHHHH
Q 042445 233 GRMKAFYDRH 242 (246)
Q Consensus 233 ~~l~~~~~~~ 242 (246)
++|.++++++
T Consensus 367 ~~l~~~l~~~ 376 (377)
T 3fdb_A 367 DRMAKAVSHH 376 (377)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhhc
Confidence 9999988653
No 9
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=6.8e-35 Score=248.00 Aligned_cols=228 Identities=18% Similarity=0.268 Sum_probs=190.0
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccC--CcccEEEEc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG--SIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~~i~~~ 75 (246)
|.+++.++++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++..+.++..++ ..++++++.
T Consensus 170 ~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 249 (407)
T 3nra_A 170 TGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIM 249 (407)
T ss_dssp HHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEE
T ss_pred HHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEe
Confidence 3455555433 7899999999999999999999999999999999999999999877666666664 466899999
Q ss_pred ccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
|+||.|+++|+|+||+++++ ++++.+..... .+++.+++.|.++..++.. ...++++.++.++++++.+.
T Consensus 250 s~sK~~g~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~ 320 (407)
T 3nra_A 250 GPSKTESLSGYRLGVAFGSR--------AIIARMEKLQAIVSLRAAGYSQAVLRGWFDE-APGWMEDRIARHQAIRDELL 320 (407)
T ss_dssp CSSSTTCCGGGCCEEEEECH--------HHHHHHHHHHHHHTSSSCHHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCeeeEEEEEcCH--------HHHHHHHHHHhhhccCCChHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988 89998887643 4557788999998888874 24667888888999999999
Q ss_pred HHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHH
Q 042445 155 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGL 232 (246)
Q Consensus 155 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~ 232 (246)
+.|++++++. +..|.+|+|+|++++... .+..++...+++++||.+.||..|+. ++++|++++.+++++++++
T Consensus 321 ~~L~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~ 395 (407)
T 3nra_A 321 HVLRGCEGVF-ARTPQAGSYLFPRLPKLA----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAA 395 (407)
T ss_dssp HHHHTSTTCB-CCCCSBSSEECCBCCCBS----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHH
T ss_pred HHHhcCCCce-eccCCeeEEEEEeCCCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHH
Confidence 9999988887 567888999998886521 13556666655678999999998874 7999999999999999999
Q ss_pred HHHHHHHHHHh
Q 042445 233 GRMKAFYDRHA 243 (246)
Q Consensus 233 ~~l~~~~~~~~ 243 (246)
++|.+++++++
T Consensus 396 ~~l~~~~~~~~ 406 (407)
T 3nra_A 396 RRIVTLVERYR 406 (407)
T ss_dssp HHHHHHHHHHB
T ss_pred HHHHHHHHHhh
Confidence 99999998764
No 10
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=9.5e-35 Score=247.46 Aligned_cols=224 Identities=17% Similarity=0.265 Sum_probs=185.0
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccC-CcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG-SIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s 76 (246)
+.+++.++++ ++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++. +.++..+. ..++++++.|
T Consensus 172 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s 250 (404)
T 2o1b_A 172 SKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK-NPSILASENGKDVAIEIYS 250 (404)
T ss_dssp GGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSC-CCCGGGSTTHHHHEEEEEE
T ss_pred HHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCCCCCCEEEEEe
Confidence 4455554432 7789999999999999999999999999999999999999988653 33443443 3467899999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
+||.|+++|+|+||+++++ ++++.+..... .++++|++.|.++..+|+.. +.++++.++.++++++.+.+
T Consensus 251 ~sK~~g~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~ 321 (404)
T 2o1b_A 251 LSKGYNMSGFRVGFAVGNK--------DMIQALKKYQTHTNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEA 321 (404)
T ss_dssp STTTTTCGGGCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHH
T ss_pred cchhccCchhheEeEecCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 89998887644 34588999999999999854 77899999999999999999
Q ss_pred HhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHH
Q 042445 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLG 233 (246)
Q Consensus 156 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~ 233 (246)
.|+++ ++. +..|.+|+|+|++++... +..++...+++++||.+.||..|+. ++++|++++.++++++++++
T Consensus 322 ~L~~~-g~~-~~~~~~g~~~~~~~~~~~-----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~ 394 (404)
T 2o1b_A 322 MLAKA-DLP-FVHAKGGIYVWLETPPGY-----DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAI 394 (404)
T ss_dssp HHHHT-TCC-EECCCBSSEEEEECCTTC-----CHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHH
T ss_pred HHHhc-CCe-ecCCCcceEEEEeCCCCC-----CHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHH
Confidence 99987 666 467888999999886421 3556666666678999999998875 78999999998889999999
Q ss_pred HHHHHHHHH
Q 042445 234 RMKAFYDRH 242 (246)
Q Consensus 234 ~l~~~~~~~ 242 (246)
+|.++++++
T Consensus 395 ~l~~~l~~~ 403 (404)
T 2o1b_A 395 RLTELAYLY 403 (404)
T ss_dssp HHHGGGGGG
T ss_pred HHHHHHHhh
Confidence 999988664
No 11
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=2.4e-34 Score=244.23 Aligned_cols=230 Identities=13% Similarity=0.139 Sum_probs=188.4
Q ss_pred hhhhhhhc-cc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC--cccEEEE
Q 042445 2 ELINQDIT-RE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS--IVPLLTL 74 (246)
Q Consensus 2 e~~~~~~~-~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~ 74 (246)
|.+++.++ .+ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++..+.++..+.. .++++++
T Consensus 154 ~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 233 (399)
T 1c7n_A 154 QKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITF 233 (399)
T ss_dssp HHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEE
T ss_pred HHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEE
Confidence 44555555 22 77899999999999999999999999999999999999999987755556655544 4688999
Q ss_pred cccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhc-C-CCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 042445 75 GSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNIS-S-DPATFIQGAVPQILEKTEEEFFSKIIDILRETADK 152 (246)
Q Consensus 75 ~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (246)
.|+||.|+++|+|+||+++++. ++++.+......+ + ++|++.|.++.+++... +.++++.++.++++++.
T Consensus 234 ~s~sK~~~~~G~r~G~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~ 305 (399)
T 1c7n_A 234 TAPSKTFNIAGMGMSNIIIKNP-------DIRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRI 305 (399)
T ss_dssp ECSHHHHTCGGGCCEEEECCCH-------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH
T ss_pred EeChhhccccchheEEEEECCH-------HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHH
Confidence 9999999999999999999852 6888887764432 2 67999999999999853 67899999999999999
Q ss_pred HHHHhhc-CCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHH
Q 042445 153 CCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALE 229 (246)
Q Consensus 153 l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~ 229 (246)
+.+.|++ +|++. +..|.+++++|++++... . +..++...+++++||.+.||..|+. ++++|++++.++++++
T Consensus 306 l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~---~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~ 380 (399)
T 1c7n_A 306 VKDFFEVNHPEIK-APLIEGTYLQWIDFRALK---M-DHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQ 380 (399)
T ss_dssp HHHHHHHHCTTSB-CCCCSBSSEEEEECGGGC---C-CHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHH
T ss_pred HHHHHHhhCCCCe-EecCCceEEEEEEcccCC---C-CHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHH
Confidence 9999998 88887 567888999999887421 1 3455555544589999999998873 7899999998888999
Q ss_pred HHHHHHHHHHHHHhh
Q 042445 230 NGLGRMKAFYDRHAE 244 (246)
Q Consensus 230 ~~~~~l~~~~~~~~~ 244 (246)
+++++|.+++++..+
T Consensus 381 ~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 381 ESLERLNKALKDLKN 395 (399)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987654
No 12
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=1.8e-34 Score=244.10 Aligned_cols=227 Identities=21% Similarity=0.379 Sum_probs=187.7
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC--cccEEEEc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS--IVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~ 75 (246)
|.+++.++++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++..+.++..+.. .++++++.
T Consensus 154 ~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (388)
T 1j32_A 154 EQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCS 233 (388)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEE
T ss_pred HHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEe
Confidence 3455555443 77899999999999999999999999999999999999999987755556555543 46789999
Q ss_pred ccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
|+||.|+++|+|+||+++++ ++++.+..... .+.+++++.|.++..+|... ..++++.++.++++++.+.
T Consensus 234 s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~ 304 (388)
T 1j32_A 234 GFAKTYAMTGWRVGFLAGPV--------PLVKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYML 304 (388)
T ss_dssp ESTTTTTCTTTCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHH
T ss_pred echhccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988 88888877643 34578999999998999743 5678889999999999999
Q ss_pred HHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHH
Q 042445 155 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGR 234 (246)
Q Consensus 155 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~ 234 (246)
+.|++++++. +..|.+++++|++++... . +..++...+++++||.+.||..|+.++++|++++.+++++++++++
T Consensus 305 ~~L~~~~g~~-~~~~~~~~~~~~~~~~~~---~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~~~~ 379 (388)
T 1j32_A 305 DALNAMPGLE-CPKPDGAFYMFPSIAKTG---R-SSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMER 379 (388)
T ss_dssp HHHHTCTTCB-CCCCCBTTEECCBCGGGT---C-CHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHH
T ss_pred HHHhhCCCCc-ccCCCeeEEEEEecCCCC---C-CHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHHHHH
Confidence 9999987887 467888999998775311 1 3555655555568999999998887899999999899999999999
Q ss_pred HHHHHHHH
Q 042445 235 MKAFYDRH 242 (246)
Q Consensus 235 l~~~~~~~ 242 (246)
|.++++++
T Consensus 380 l~~~l~~~ 387 (388)
T 1j32_A 380 LEKFLHGI 387 (388)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998764
No 13
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.5e-34 Score=244.38 Aligned_cols=229 Identities=20% Similarity=0.257 Sum_probs=186.2
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC-cccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS-IVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s 76 (246)
+.+++.++++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++..+.++..+.. .++++++.|
T Consensus 163 ~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s 242 (412)
T 2x5d_A 163 ERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFT 242 (412)
T ss_dssp HHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEE
T ss_pred HHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEec
Confidence 3455555433 77899999999999999999999999999999999999999987654555555543 568999999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
+||.|+++|+|+||+++++ ++++.+..... .++++|++.|.++..+|+.. +.++++.++.++++++.+.+
T Consensus 243 ~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~ 313 (412)
T 2x5d_A 243 LSKSYNMAGWRIGFMVGNP--------ELVSALARIKSYHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVK 313 (412)
T ss_dssp CC-CCSCTTSCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCcccceEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHH
Confidence 9999989999999999987 88888877643 34588999999999999853 46789999999999999999
Q ss_pred HhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHH
Q 042445 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLG 233 (246)
Q Consensus 156 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~ 233 (246)
.|+++ ++. +..|.+|+|+|++++... . ..+..++...+++++||.+.||..|+. ++++|++++.++++++++++
T Consensus 314 ~L~~~-g~~-~~~~~~g~~~~~~~~~~~-~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~ 389 (412)
T 2x5d_A 314 GLREA-GWM-VENPKASMYVWAKIPEPY-A-HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVR 389 (412)
T ss_dssp HHHHH-TCC-CCCCSBSSEEEEECCTTT-G-GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHH
T ss_pred HHHHC-CCE-ecCCCeeeEEEEEcCCcc-C-CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHH
Confidence 99987 666 467788999999886321 0 002556666666678999999998864 68999999999999999999
Q ss_pred HHHHHHHHHh
Q 042445 234 RMKAFYDRHA 243 (246)
Q Consensus 234 ~l~~~~~~~~ 243 (246)
+|.+++++..
T Consensus 390 ~l~~~l~~~~ 399 (412)
T 2x5d_A 390 GIKAMFRADG 399 (412)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 9999987654
No 14
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=1.2e-34 Score=248.68 Aligned_cols=219 Identities=17% Similarity=0.235 Sum_probs=179.7
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccC-CcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG-SIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++.+. ++..+. ..+++++++|+||.||++|+|+||
T Consensus 203 ~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~ 281 (432)
T 3ei9_A 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPR-SIFEIPGAEEVAMETASFSNYAGFTGVRLGW 281 (432)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCS-SGGGSTTGGGTEEEEEESHHHHCTTTTCCEE
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCC-ChhhcCCCCCeEEEEecchhccCCcccceEE
Confidence 788999999999999999999999999999999999999998876433 343342 346799999999999999999999
Q ss_pred EEeeCCC---CCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 042445 91 LVTSDPN---GILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCP 166 (246)
Q Consensus 91 i~~~~~~---~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 166 (246)
+++++.. ... .+++.+..... .++++++++|.++..++......++++.++.++++++.+.+.|+++ ++. +
T Consensus 282 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~ 356 (432)
T 3ei9_A 282 TVIPKKLLYSDGF---PVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYD-V 356 (432)
T ss_dssp EECCTTCBCTTSC---BHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-E
T ss_pred EEEChHHhhcchH---HHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Cce-e
Confidence 9999821 000 12666665533 3446899999999999875445789999999999999999999988 676 4
Q ss_pred cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHHHHHHHHHHH
Q 042445 167 KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~~l~~~~~~~ 242 (246)
..+.+++|+|+.++.. ++.+++..+++++||.+.||..|+. ++++|+|+..+++++++++++|++.-+.+
T Consensus 357 ~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~~~~~~ 428 (432)
T 3ei9_A 357 YGGKNAPYVWVHFPNQ------SSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYKHH 428 (432)
T ss_dssp EECSSSSEEEEECTTS------CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTS
T ss_pred cCCCcceEEEEECCCC------CHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHHHhhhc
Confidence 5667899999988732 3677778888888999999999876 79999999889999999999999876544
No 15
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=2.9e-34 Score=246.58 Aligned_cols=222 Identities=19% Similarity=0.277 Sum_probs=181.6
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC----------cccEEEEccccccc
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS----------IVPLLTLGSISKRG 81 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~----------~~~~i~~~s~sK~~ 81 (246)
++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++..+.++..+.. .+++++++|+||.|
T Consensus 196 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~ 275 (435)
T 3piu_A 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL 275 (435)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc
Confidence 78899999999999999999999999999999999999998888766655544432 56889999999999
Q ss_pred ccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhch--HHHHHHHHHHHHHHHHHHHHHhhc
Q 042445 82 IVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTE--EEFFSKIIDILRETADKCCDRLKE 159 (246)
Q Consensus 82 ~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~ 159 (246)
|++|+|+||+++++. .+.+.+......+ ..+++.|.++..++.... +.++++.++.++++++.+.+.|++
T Consensus 276 g~~G~r~G~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 347 (435)
T 3piu_A 276 GLPGFRVGAIYSNDD-------MVVAAATKMSSFG-LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK 347 (435)
T ss_dssp CCGGGCEEEEEESCH-------HHHHHHHHHGGGS-CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCceeEEEEEeCCH-------HHHHHHHHHhhcC-CCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999652 6667776655443 779999999999998543 457888899999999999999998
Q ss_pred CCCCccccCCCCceEEEEEeccccccCCC-ChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeec-ChHHHHHHHHHH
Q 042445 160 IPCITCPKKPEGSMFVMVKLNYSLLEGIN-SDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAV-EPSALENGLGRM 235 (246)
Q Consensus 160 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~-~~~~l~~~~~~l 235 (246)
. ++. +..+.+|+|+|++++........ +..+++..+++++||.+.||..|+. ++++|++++. +++++++++++|
T Consensus 348 ~-g~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l 425 (435)
T 3piu_A 348 S-GIS-CLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRL 425 (435)
T ss_dssp T-TCE-ECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHH
T ss_pred c-CCc-ccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHH
Confidence 7 676 56788899999988753100000 1345666666666999999998865 7899999997 999999999999
Q ss_pred HHHHHHHh
Q 042445 236 KAFYDRHA 243 (246)
Q Consensus 236 ~~~~~~~~ 243 (246)
.+++++..
T Consensus 426 ~~~l~~~~ 433 (435)
T 3piu_A 426 KAFVGEYY 433 (435)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998765
No 16
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=4.6e-34 Score=241.95 Aligned_cols=216 Identities=19% Similarity=0.311 Sum_probs=181.1
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++.+. +...+ .+++++++|+||.++++|+|+||+
T Consensus 166 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~ 242 (391)
T 3h14_A 166 MVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVINSFSKYFSMTGWRVGWM 242 (391)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEEEESSSTTCCTTSCCEEE
T ss_pred EECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEEEechhccCCccceeEEE
Confidence 788999999999999999999999999999999999999999887533 32222 457899999999999999999999
Q ss_pred EeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 042445 92 VTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPE 170 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 170 (246)
++++ ++++.+..... .+++++++.|.++.+++. ...++++.++.++++++.+.+.|++++ +..+..|.
T Consensus 243 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~ 311 (391)
T 3h14_A 243 VVPE--------DQVRVVERIAQNMFICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKAG-FTRIAPPD 311 (391)
T ss_dssp ECCG--------GGHHHHHHHHHHTTCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHT-CCCBCCCC
T ss_pred EeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcC-CCcccCCC
Confidence 9998 88888877644 345789999999988888 568899999999999999999999874 43346788
Q ss_pred CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC---CCeEEEEeecChHHHHHHHHHHHHHHHHHhhc
Q 042445 171 GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFAVEPSALENGLGRMKAFYDRHAEK 245 (246)
Q Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~iRls~~~~~~~l~~~~~~l~~~~~~~~~~ 245 (246)
+++++|++++... .+..++...+++++||.+.||..|+. ++++|++++.+++++++++++|.++++++...
T Consensus 312 ~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~~~~~~~ 385 (391)
T 3h14_A 312 GAFYVYADVSDLT----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQARGEG 385 (391)
T ss_dssp BTTEEEEECTTTC----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHHHHC---
T ss_pred eeEEEEEecCccC----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhccc
Confidence 9999999886421 13566666667677999999999876 68999999998999999999999999887654
No 17
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=1.6e-34 Score=249.10 Aligned_cols=217 Identities=13% Similarity=0.176 Sum_probs=180.2
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC-cccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS-IVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++..+.++..++. .++++++.||||.||++|+|+||
T Consensus 214 ~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~ 293 (449)
T 3qgu_A 214 FFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGW 293 (449)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEE
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEE
Confidence 77899999999999999999999999999999999999999988755556666644 56789999999999999999999
Q ss_pred EEeeCCCCCcchhhHHH--------HHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 042445 91 LVTSDPNGILQDSGIVD--------SIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIP 161 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~--------~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 161 (246)
+++++ ++++ .+..... .+++++++.|.++..++......++++.++.++++++.+.+.|+++
T Consensus 294 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 364 (449)
T 3qgu_A 294 TVVPK--------ALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM- 364 (449)
T ss_dssp EECCT--------TCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred EecCH--------HHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 99988 3332 3433322 3347899999999999986445789999999999999999999988
Q ss_pred CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHHHHHHHH
Q 042445 162 CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLGRMKAFY 239 (246)
Q Consensus 162 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~~l~~~~ 239 (246)
|+. +..|.+|+|+|+.++ .. ++.+++..+++++||.+.||..|+. ++++||++..+++++++++++|.+++
T Consensus 365 g~~-~~~~~~~~~~~~~~~-~~-----~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~ 437 (449)
T 3qgu_A 365 GFS-VYGGDDAPYIWVGFP-GK-----PSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAY 437 (449)
T ss_dssp TCC-EEESSSSSEEEEECT-TS-----CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCe-eeCCCCeeEEEEECC-CC-----CHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 676 457788999999887 21 4667777777778999999998876 79999998889999999999999998
Q ss_pred HHHhh
Q 042445 240 DRHAE 244 (246)
Q Consensus 240 ~~~~~ 244 (246)
++...
T Consensus 438 ~~~~~ 442 (449)
T 3qgu_A 438 GKRNA 442 (449)
T ss_dssp C----
T ss_pred HhcCc
Confidence 76543
No 18
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=2.8e-34 Score=243.46 Aligned_cols=219 Identities=21% Similarity=0.351 Sum_probs=181.1
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCC-CCccccc---cC-CcccEE
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNT-PFVSMGV---FG-SIVPLL 72 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~---~~-~~~~~i 72 (246)
+.+++.++++ ++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. +...+.. ++ ..++++
T Consensus 159 ~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 238 (396)
T 3jtx_A 159 RSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLL 238 (396)
T ss_dssp GGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEE
T ss_pred HHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEE
Confidence 3455555443 7789999999999999999999999999999999999999988763 2222211 11 256899
Q ss_pred EEcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 042445 73 TLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETAD 151 (246)
Q Consensus 73 ~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 151 (246)
++.|+||.|+++|+|+||+++++ ++++.+..... .++++|++.|.++..++.. +.++++.++.++++++
T Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~ 308 (396)
T 3jtx_A 239 MFTSLSKRSNVPGLRSGFVAGDA--------ELLKNFLLYRTYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFE 308 (396)
T ss_dssp EEEESTTTSSCGGGCCEEEEECH--------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHH
T ss_pred EEeccccccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 89998887644 3457899999999999984 5788999999999999
Q ss_pred HHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--------CCeEEEEeec
Q 042445 152 KCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--------KDWLRITFAV 223 (246)
Q Consensus 152 ~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--------~~~iRls~~~ 223 (246)
.+.+.|++. +. +..|++|+|+|++++.. ++.+++..+++++||.+.||..|+. ++++|++++.
T Consensus 309 ~l~~~l~~~--~~-~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~ 379 (396)
T 3jtx_A 309 RVIPILQQV--FD-VKLPDASFYIWLKVPDG------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA 379 (396)
T ss_dssp HHHHHHTTT--SC-CCCCSSSSEEEEECTTS------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS
T ss_pred HHHHHHHhc--CC-ccCCCeeEEEEEECCCC------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC
Confidence 999999885 22 45788999999988752 3667777777888999999998864 5899999999
Q ss_pred ChHHHHHHHHHHHHHH
Q 042445 224 EPSALENGLGRMKAFY 239 (246)
Q Consensus 224 ~~~~l~~~~~~l~~~~ 239 (246)
+++++++++++|.+++
T Consensus 380 ~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 380 DVATCVKAAEDIVSLY 395 (396)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998864
No 19
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=7.1e-34 Score=240.43 Aligned_cols=229 Identities=16% Similarity=0.181 Sum_probs=191.3
Q ss_pred hhhhhhhc-cc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC--cccEEEE
Q 042445 2 ELINQDIT-RE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS--IVPLLTL 74 (246)
Q Consensus 2 e~~~~~~~-~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~ 74 (246)
+.+++.++ ++ ++++||||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..+.. .++++++
T Consensus 150 ~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~ 229 (391)
T 3dzz_A 150 ADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSL 229 (391)
T ss_dssp HHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEE
T ss_pred HHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEE
Confidence 45566665 33 78999999999999999999999999999999999999999988766666666543 5689999
Q ss_pred cccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh--hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 042445 75 GSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN--ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADK 152 (246)
Q Consensus 75 ~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (246)
.|+||.++++|+|+||+++++. ++++.+..... ..++++++.+.++..++.. .+.++++.++.++++++.
T Consensus 230 ~s~sK~~g~~G~r~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~ 301 (391)
T 3dzz_A 230 ISPSKTFNLAALHAACAIIPNP-------DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAY 301 (391)
T ss_dssp ECSHHHHTCTTTCCEEEECCSH-------HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHH
T ss_pred EeChhhccccchhheEEEECCH-------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999842 88888876632 2347899999999999985 467899999999999999
Q ss_pred HHHHhhc-CCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHH
Q 042445 153 CCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALE 229 (246)
Q Consensus 153 l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~ 229 (246)
+.+.|++ ++++. +..|.+++++|++++.... +..++...+++++||.+.||..|+. ++++|++++.++++++
T Consensus 302 l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~ 376 (391)
T 3dzz_A 302 AREFLAKEVPEVK-VLDSNASYLAWVDISALGM----NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVI 376 (391)
T ss_dssp HHHHHHHHCTTSE-ECCCCBSSEEEEECGGGCS----CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHH
T ss_pred HHHHHHhhCCCcE-EeccCceEEEEEehhhcCC----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHH
Confidence 9999998 88887 5688999999998875311 3555655555689999999998876 5899999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 042445 230 NGLGRMKAFYDRHA 243 (246)
Q Consensus 230 ~~~~~l~~~~~~~~ 243 (246)
+++++|.++++++.
T Consensus 377 ~~l~~l~~~l~~~~ 390 (391)
T 3dzz_A 377 DGMQRLKQGVLNLN 390 (391)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999987653
No 20
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=6.7e-34 Score=240.70 Aligned_cols=228 Identities=21% Similarity=0.360 Sum_probs=185.9
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC-cccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS-IVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s 76 (246)
|.+++.++++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++..+.++..+.. .++++++.|
T Consensus 151 ~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 230 (389)
T 1gd9_A 151 DELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNG 230 (389)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEE
T ss_pred HHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEec
Confidence 3445555433 77899999999999999999999999999999999999999887653445555533 567899999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTE-EEFFSKIIDILRETADKCC 154 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~ 154 (246)
+||.|+++|+|+||+++++ ++++.+..... .+++++++.|.++..+|+... +.++++.++.++++++.+.
T Consensus 231 ~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 302 (389)
T 1gd9_A 231 FSKTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVW 302 (389)
T ss_dssp STTTTTCGGGCCEEEECCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhcCCcccceEEEEECH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988 89998887644 344789999999999998532 2388999999999999999
Q ss_pred HHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHH
Q 042445 155 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGL 232 (246)
Q Consensus 155 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~ 232 (246)
+.|+++ ++. +..|.+|+++|++++... .+..++...+++++||.+.||..|+. ++++|++++.+++++++++
T Consensus 303 ~~L~~~-g~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l 376 (389)
T 1gd9_A 303 KRLNEM-GLP-TVKPKGAFYIFPRIRDTG----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAM 376 (389)
T ss_dssp HHHHHT-TCC-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHH
T ss_pred HHHHHc-CCe-ecCCCeeeEEEEeccCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHH
Confidence 999988 676 457888999998876411 13555555555589999999998874 7899999999999999999
Q ss_pred HHHHHHHHHHh
Q 042445 233 GRMKAFYDRHA 243 (246)
Q Consensus 233 ~~l~~~~~~~~ 243 (246)
++|.+++++.+
T Consensus 377 ~~l~~~~~~~~ 387 (389)
T 1gd9_A 377 DRMERVLKERK 387 (389)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcc
Confidence 99999987643
No 21
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.8e-34 Score=246.76 Aligned_cols=228 Identities=18% Similarity=0.309 Sum_probs=189.2
Q ss_pred hhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC-cccEEEEccc
Q 042445 3 LINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS-IVPLLTLGSI 77 (246)
Q Consensus 3 ~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~ 77 (246)
.+++.++++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++..+.++..+.. .++++++.|+
T Consensus 166 ~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 245 (422)
T 3fvs_A 166 ELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSA 245 (422)
T ss_dssp HHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEH
T ss_pred HHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecc
Confidence 344444433 78899999999999999999999999999999999999999998766666666643 5789999999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhc------hHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKT------EEEFFSKIIDILRETA 150 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~ 150 (246)
||.|+++|+|+||+++++ ++++.+..... ..++++++.|.++..++... .+.++++.++.+++++
T Consensus 246 sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (422)
T 3fvs_A 246 GKTFSATGWKVGWVLGPD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCR 317 (422)
T ss_dssp HHHHTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHH
T ss_pred hhccCCccceEEEEEeCH--------HHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHH
Confidence 999999999999999998 89998877643 34478999999999999741 2567899999999999
Q ss_pred HHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCC---------hHHHHHHHHHhcCeEEecCCCcCC-------C
Q 042445 151 DKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINS---------DMEFALKLAKEESVIVLPGITVGL-------K 214 (246)
Q Consensus 151 ~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gi~v~pg~~f~~-------~ 214 (246)
+.+.+.|+++ ++. +..|++|+|+|++++.... +..+ +.+++..+++++||.+.||..|+. .
T Consensus 318 ~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~ 394 (422)
T 3fvs_A 318 DHMIRSLQSV-GLK-PIIPQGSYFLITDISDFKR-KMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFD 394 (422)
T ss_dssp HHHHHHHHTT-TCE-EEBCSBSSEEEEECHHHHH-HCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSC
T ss_pred HHHHHHHHHc-CCe-ecCCCeeeEEEEechhhcc-cccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCC
Confidence 9999999988 676 4678999999998864210 0000 446777778889999999998853 6
Q ss_pred CeEEEEeecChHHHHHHHHHHHHHHHH
Q 042445 215 DWLRITFAVEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 215 ~~iRls~~~~~~~l~~~~~~l~~~~~~ 241 (246)
+++|++++.+++++++++++|.+++++
T Consensus 395 ~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 395 HYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp SEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 899999999999999999999998864
No 22
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=4.2e-34 Score=241.03 Aligned_cols=220 Identities=20% Similarity=0.291 Sum_probs=179.0
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++.....+...+..++++++.|+
T Consensus 149 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 228 (376)
T 2dou_A 149 KAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSL 228 (376)
T ss_dssp GGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEH
T ss_pred HHHHHhhccCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecc
Confidence 3455554332 778999999999999999999999999999999999999998876333233333445688999999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDR 156 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (246)
||.|+++|+|+||+++++ ++++.+..... .++++|++.|.++..+++.. +.++++.++.++++++.+.+.
T Consensus 229 sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~ 299 (376)
T 2dou_A 229 SKSYNLAGFRLGFALGSE--------EALARLERVKGVIDFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEA 299 (376)
T ss_dssp HHHHTCGGGCCEEEEECH--------HHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCChhheeEEEecCH--------HHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988 89998887644 34478999999999999853 678999999999999999999
Q ss_pred hhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHHH
Q 042445 157 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLGR 234 (246)
Q Consensus 157 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~~ 234 (246)
|+++ +. +..|.+|+|+|++++... +..++... |.++||.+.||..|+. ++++|++++.+++++++++++
T Consensus 300 L~~~--~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~-l~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~ 370 (376)
T 2dou_A 300 LKGV--LS-LLPPRATMYLWGRLPEGV-----DDLEFGLR-LVERGVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKR 370 (376)
T ss_dssp HTTT--SE-ECCCCBSSEEEEECCTTC-----CHHHHHHH-HHHTTEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHH
T ss_pred HHHh--cC-ccCCCeeEEEEEECCCCC-----CHHHHHHH-HHHCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHH
Confidence 9886 54 456788999999886431 34555554 5566999999998874 689999999888999999999
Q ss_pred HHHHH
Q 042445 235 MKAFY 239 (246)
Q Consensus 235 l~~~~ 239 (246)
|.+++
T Consensus 371 l~~~l 375 (376)
T 2dou_A 371 IREAL 375 (376)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 98764
No 23
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=249.03 Aligned_cols=226 Identities=21% Similarity=0.335 Sum_probs=182.9
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCcccccc--CCcccEEEEc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVF--GSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~--~~~~~~i~~~ 75 (246)
|.+++.++++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++ .+.++..+ +..++++++.
T Consensus 192 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~ 270 (447)
T 3b46_A 192 EQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVG 270 (447)
T ss_dssp HHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEE
T ss_pred HHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEe
Confidence 3455555433 778999999999999999999999999999999999999999876 33444444 2346899999
Q ss_pred ccccccccCCceEEEEEe-eCCCCCcchhhHHHHHHHHh-hhcCCCCchHHHHHHHHHhhch-HHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVT-SDPNGILQDSGIVDSIKIFL-NISSDPATFIQGAVPQILEKTE-EEFFSKIIDILRETADK 152 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~ 152 (246)
|+||.|+++|+|+||+++ ++ ++++.+.... ..+++.+++.|.++..+|+... +.++++.++.++++++.
T Consensus 271 S~sK~~~~~G~riG~~~~~~~--------~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~ 342 (447)
T 3b46_A 271 SAGKSFAATGWRIGWVLSLNA--------ELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKI 342 (447)
T ss_dssp EHHHHTTCTTSCCEEEECSCH--------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cCchhcCCcchhhEEEEeCCH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999 77 8888887653 3445789999999999998643 56789999999999999
Q ss_pred HHHHhhcCCCCccccCCCCceEEEEEeccccccC----------CCChHHHHHHHHHhcCeEEecCCCcCC-------CC
Q 042445 153 CCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG----------INSDMEFALKLAKEESVIVLPGITVGL-------KD 215 (246)
Q Consensus 153 l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------~~~~~~~~~~ll~~~gi~v~pg~~f~~-------~~ 215 (246)
+.+.|+++ |+. +..|.+|+|+|++++....+. ..++.+++..+++++||.+.||..|+. .+
T Consensus 343 l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~ 420 (447)
T 3b46_A 343 FTSIFDEL-GLP-YTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAEN 420 (447)
T ss_dssp HHHHHHHH-TCC-EECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTT
T ss_pred HHHHHHHC-CCe-ecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCC
Confidence 99999987 666 467899999999886421100 013446666666789999999988864 58
Q ss_pred eEEEEeecChHHHHHHHHHHHHH
Q 042445 216 WLRITFAVEPSALENGLGRMKAF 238 (246)
Q Consensus 216 ~iRls~~~~~~~l~~~~~~l~~~ 238 (246)
++|++++.+++++++++++|.++
T Consensus 421 ~iRls~~~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 421 LLRFAVCKDDAYLENAVERLKLL 443 (447)
T ss_dssp EEEEECCSCHHHHHHHHHHGGGG
T ss_pred EEEEEEeCCHHHHHHHHHHHHHH
Confidence 99999999999999999999873
No 24
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=9.6e-34 Score=238.99 Aligned_cols=225 Identities=18% Similarity=0.289 Sum_probs=187.5
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC--cccEEEEc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS--IVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~ 75 (246)
|.+++.+.++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++..+.++..+.. .++++++.
T Consensus 147 ~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 226 (383)
T 3kax_A 147 EHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCM 226 (383)
T ss_dssp HHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEE
T ss_pred HHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEE
Confidence 4455555433 78999999999999999999999999999999999999999988766666666654 47899999
Q ss_pred ccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhh--cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNI--SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
|+||.++++|+|+||+++++. ++++.+...... .+++|++.+.++..++.. .+.++++.++.++++++.+
T Consensus 227 s~sK~~~~~G~r~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l 298 (383)
T 3kax_A 227 APSKTFNIAGLQASIIIIPNE-------KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE-CNDWLNEIRFYIEDNAKFA 298 (383)
T ss_dssp CSHHHHTCGGGCCEEEECCCH-------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHH
T ss_pred EChhhccCcchhheEEEeCCH-------HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999542 788888766432 237899999999999985 4678999999999999999
Q ss_pred HHHhhc-CCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHH
Q 042445 154 CDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEN 230 (246)
Q Consensus 154 ~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~ 230 (246)
.+.|++ +|++. +..|.+++++|++++.... +..++...+++++||.+.||..|+. ++++|++++.+++++++
T Consensus 299 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~ 373 (383)
T 3kax_A 299 CEYIKDHIPTLS-VMKPEGSFLLWIDCSALNL----SQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEE 373 (383)
T ss_dssp HHHHHHHCTTCE-ECCCSBSSEEEEECGGGCC----CHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHH
T ss_pred HHHHHhhCCCce-EecCCceEEEEEEccccCC----CHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcCCHHHHHH
Confidence 999988 78887 5688999999998875321 3556655555589999999998876 69999999999999999
Q ss_pred HHHHHHHHH
Q 042445 231 GLGRMKAFY 239 (246)
Q Consensus 231 ~~~~l~~~~ 239 (246)
++++|.+++
T Consensus 374 ~l~~l~~~l 382 (383)
T 3kax_A 374 ILNRLRHTF 382 (383)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998876
No 25
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=5.2e-34 Score=244.38 Aligned_cols=216 Identities=19% Similarity=0.274 Sum_probs=180.5
Q ss_pred ccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEEE
Q 042445 13 SDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLV 92 (246)
Q Consensus 13 ~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i~ 92 (246)
+++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++..+.++..++..++++++.|+||.|+ +|+|+||++
T Consensus 194 ~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~ 272 (425)
T 1vp4_A 194 VSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVA 272 (425)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEE
T ss_pred CCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEe
Confidence 6899999999999999999999999999999999999999987655556655655568999999999998 999999999
Q ss_pred eeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhc-CC---CCccc
Q 042445 93 TSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTE-EEFFSKIIDILRETADKCCDRLKE-IP---CITCP 166 (246)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~---~~~~~ 166 (246)
+++ ++++.+..... .++++|++.|.++..+|+... +.++++.++.++++++.+.+.|++ .+ ++. +
T Consensus 273 ~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~-~ 343 (425)
T 1vp4_A 273 GSK--------EFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVK-W 343 (425)
T ss_dssp CCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCE-E
T ss_pred eCH--------HHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceE-E
Confidence 998 89988876633 344779999999999998642 678899999999999999999987 45 466 4
Q ss_pred cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC----CCeEEEEeec-ChHHHHHHHHHHHHHHHH
Q 042445 167 KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KDWLRITFAV-EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~iRls~~~-~~~~l~~~~~~l~~~~~~ 241 (246)
..|++|+|+|++++... +..++... |.++||.+.||..|+. ++++|++++. +++++++++++|.+++++
T Consensus 344 ~~~~~g~~~~~~~~~~~-----~~~~l~~~-l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~ 417 (425)
T 1vp4_A 344 VKSEGGLFIWLTLPEGF-----DTWEMFEY-AKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLE 417 (425)
T ss_dssp CCCSBSSEEEEECCTTC-----CTTTTHHH-HHHHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred ecCCccEEEEEEcCCCC-----CHHHHHHH-HHHCCCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 57889999999887421 23445454 4456999999988853 6899999997 789999999999999987
Q ss_pred Hhh
Q 042445 242 HAE 244 (246)
Q Consensus 242 ~~~ 244 (246)
..+
T Consensus 418 ~~~ 420 (425)
T 1vp4_A 418 YGK 420 (425)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 26
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=7.6e-34 Score=243.18 Aligned_cols=226 Identities=15% Similarity=0.138 Sum_probs=180.7
Q ss_pred hhhhhhhcc---c--c-ccCCcCCCccCCChhhHHHHHHHHH-HcCCEEEEccccCC--cccCCCCCccccc----cCCc
Q 042445 2 ELINQDITR---E--F-SDFQVFHVGSGFSGSFVSPIAETAK-KLGIMVIANEVYGH--LAFGNTPFVSMGV----FGSI 68 (246)
Q Consensus 2 e~~~~~~~~---~--~-~~~p~NPtG~~~~~~~~~~l~~~~~-~~~~~ii~De~y~~--~~~~~~~~~~~~~----~~~~ 68 (246)
|.+++.+++ + + +++||||||.++|.+++++|+++|+ +||+++|+||+|.+ +..++..+.++.. .+..
T Consensus 168 ~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (422)
T 3d6k_A 168 GVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNP 247 (422)
T ss_dssp HHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCT
T ss_pred HHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCC
Confidence 445555543 2 4 6899999999999999999999999 99999999999986 4433333334422 3455
Q ss_pred ccEEEEcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhh-ch-HHHHHHHHHH
Q 042445 69 VPLLTLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEK-TE-EEFFSKIIDI 145 (246)
Q Consensus 69 ~~~i~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~-~~-~~~~~~~~~~ 145 (246)
+++++++||||. +++|+|+||+++++ ++++.+..... .+.++|++.|.++..++++ +. +.++++.++.
T Consensus 248 ~~~i~~~S~SK~-~~~GlriG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 318 (422)
T 3d6k_A 248 NRFWFMSSTSKI-THAGSGVSFFASSK--------ENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAAS 318 (422)
T ss_dssp TCEEEEEESTTT-SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHH
T ss_pred CcEEEEcChhhh-cCcccceEEEEeCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 689999999999 89999999999998 99998887644 4457899999999999986 22 5788999999
Q ss_pred HHHHHHHHHHHhhc-CC---CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEec-CCCcC-----CCC
Q 042445 146 LRETADKCCDRLKE-IP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP-GITVG-----LKD 215 (246)
Q Consensus 146 ~~~~~~~l~~~L~~-~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~-----~~~ 215 (246)
++++++.+.+.|++ ++ ++. +..|++|+|+|++++.. +.+.+..++.++||.+.| |..|. .++
T Consensus 319 ~~~~~~~l~~~L~~~l~~~~~~~-~~~p~~g~~~~~~~~~~-------~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~ 390 (422)
T 3d6k_A 319 LAPKFERVLEILDSRLSEYGVAK-WTSPTGGYFISVDVVPG-------TASRVVELAKEAGIALTGAGSSFPLHNDPNNE 390 (422)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEE-ECCCSBSSCEEEEESTT-------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSC
T ss_pred HHHHHHHHHHHHHHhcCcCCceE-EeCCCcceEEEEECCCC-------CHHHHHHHHHHCCeEEEcCccccCCCCCCCCC
Confidence 99999999988865 32 344 46788999999998742 244556788899999999 55563 268
Q ss_pred eEEEEee-cChHHHHHHHHHHHHHHHHHhh
Q 042445 216 WLRITFA-VEPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 216 ~iRls~~-~~~~~l~~~~~~l~~~~~~~~~ 244 (246)
++|+|++ .+++++++++++|.+++++..+
T Consensus 391 ~iRis~~~~~~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 391 NIRLAPSLPPVAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 4999999999999999987654
No 27
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.5e-33 Score=239.37 Aligned_cols=227 Identities=21% Similarity=0.286 Sum_probs=184.8
Q ss_pred hhhhhhhcc-c-----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCc---ccEE
Q 042445 2 ELINQDITR-E-----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSI---VPLL 72 (246)
Q Consensus 2 e~~~~~~~~-~-----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~---~~~i 72 (246)
|.+++.+++ + ++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++..+.++..++.. ++++
T Consensus 152 ~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i 231 (397)
T 2zyj_A 152 DALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVI 231 (397)
T ss_dssp HHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEE
T ss_pred HHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEE
Confidence 345555543 2 368999999999999999999999999999999999999999876555555555544 6899
Q ss_pred EEcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 042445 73 TLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETAD 151 (246)
Q Consensus 73 ~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 151 (246)
++.|+||.|+ +|+|+||+++++ ++++.+..... .+++.|++.|.++..+|+.....++++.++.++++++
T Consensus 232 ~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (397)
T 2zyj_A 232 YLGSFSKVLS-PGLRVAFAVAHP--------EALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQ 302 (397)
T ss_dssp EEEESTTTTC-GGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred EEeccccccc-ccceeEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999999998 999999999998 88988876633 3446799999999999986422678899999999999
Q ss_pred HHHHHhhc-CC-CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC----CCCeEEEEeec-C
Q 042445 152 KCCDRLKE-IP-CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG----LKDWLRITFAV-E 224 (246)
Q Consensus 152 ~l~~~L~~-~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~----~~~~iRls~~~-~ 224 (246)
.+.+.|++ +| ++. +..|.+|+|+|++++... +..++. +.|.++||.+.||..|+ .++++|++++. +
T Consensus 303 ~l~~~L~~~~~~g~~-~~~~~~g~~~~~~~~~~~-----~~~~~~-~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~ 375 (397)
T 2zyj_A 303 AMLHALDREVPKEVR-YTRPKGGMFVWMELPKGL-----SAEGLF-RRALEENVAFVPGGPFFANGGGENTLRLSYATLD 375 (397)
T ss_dssp HHHHHHHHHSCTTSE-ECCCSBSSEEEEECSTTC-----CHHHHH-HHHHHTTEEEEESGGGCTTSCCTTEEEEECSSSC
T ss_pred HHHHHHHHHCCCCeE-EccCCccEEEEEEcCCCC-----CHHHHH-HHHHHCCCEEechHHhcCCCCCCCeEEEEcCCCC
Confidence 99999987 67 576 457889999999886421 244554 45556799999998885 36899999997 7
Q ss_pred hHHHHHHHHHHHHHHHHHhh
Q 042445 225 PSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 225 ~~~l~~~~~~l~~~~~~~~~ 244 (246)
++++++++++|.+++++..+
T Consensus 376 ~~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 376 REGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999987654
No 28
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=7.3e-34 Score=239.37 Aligned_cols=224 Identities=21% Similarity=0.337 Sum_probs=187.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++||||||.+++.+++++|.++|++||+++|+||+|.++.++ +..+.. +..+++++++||
T Consensus 145 ~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~--~~~~~~--~~~~~~i~~~s~ 220 (375)
T 3op7_A 145 EKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL--DVPSII--EVYDKGIAVNSL 220 (375)
T ss_dssp HHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS--CCCCHH--HHCTTEEEEEES
T ss_pred HHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc--CCCchh--hhcCCEEEEeEC
Confidence 4455555543 88899999999999999999999999999999999999998876 222222 224578999999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDR 156 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (246)
||.++++|+|+||+++++ ++++.+..... .+.+++++.+.++..++.. .+.++++.++.++++++.+.+.
T Consensus 221 sK~~~~~G~r~G~v~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~ 291 (375)
T 3op7_A 221 SKTYSLPGIRIGWVAANH--------QVTDILRDYRDYTMICAGVFDDLVAQLALAH-YQEILERNRHILEENLAILDQW 291 (375)
T ss_dssp SSSSSCGGGCCEEEECCH--------HHHHHHTTTGGGTTSCCCHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCcccceEEEEeCH--------HHHHHHHHHHhhhccCCCcHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999977 89998887644 3447789999999888884 4678899999999999999999
Q ss_pred hhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHHH
Q 042445 157 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRMK 236 (246)
Q Consensus 157 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l~ 236 (246)
|++.+++. +..|.+++++|+.++... +..+++..+++++||.+.||..|+.++++|++++.+.+++++++++|.
T Consensus 292 l~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~i~~~l~~l~ 365 (375)
T 3op7_A 292 IEEEPLVS-YIRPAVVSTSFVKIAVDM-----PMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQETLIKGLEKLS 365 (375)
T ss_dssp HHHCTTEE-ECCCSSSSCEEEEECCSS-----CHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCSCHHHHHHHHHHHH
T ss_pred HhhCCCce-EecCCCeEEEeEEcCCCC-----CHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 99887777 568889999999887532 466777777789999999999998899999999988899999999999
Q ss_pred HHHHHHhh
Q 042445 237 AFYDRHAE 244 (246)
Q Consensus 237 ~~~~~~~~ 244 (246)
++++++.+
T Consensus 366 ~~l~~~~~ 373 (375)
T 3op7_A 366 QFLRRFDK 373 (375)
T ss_dssp HHHGGGC-
T ss_pred HHHHHHhh
Confidence 99987654
No 29
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=4.4e-34 Score=243.35 Aligned_cols=224 Identities=18% Similarity=0.288 Sum_probs=185.6
Q ss_pred hhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccC-CcccEEEEccc
Q 042445 3 LINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG-SIVPLLTLGSI 77 (246)
Q Consensus 3 ~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~ 77 (246)
.+++.++++ ++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++..+.++..+. ..++++++.|+
T Consensus 159 ~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 238 (410)
T 3e2y_A 159 ELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSA 238 (410)
T ss_dssp HHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEH
T ss_pred HHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecc
Confidence 444444443 7889999999999999999999999999999999999999999876665665554 35789999999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhh------chHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEK------TEEEFFSKIIDILRETA 150 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~ 150 (246)
||.|+++|+|+||+++++ ++++.+..... .+++++++.|.++..++.. ....++++.++.+++++
T Consensus 239 sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (410)
T 3e2y_A 239 GKTFSVTGWKLGWSIGPA--------HLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKR 310 (410)
T ss_dssp HHHSSCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred hhhcCCCCceEEEEEECH--------HHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHH
Confidence 999999999999999998 89998887643 3457899999999999974 23568899999999999
Q ss_pred HHHHHHhhcCCCCccccCCCCceEEEEEeccccccCC-------CChHHHHHHHHHhcCeEEecCCCcCC-------CCe
Q 042445 151 DKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI-------NSDMEFALKLAKEESVIVLPGITVGL-------KDW 216 (246)
Q Consensus 151 ~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~pg~~f~~-------~~~ 216 (246)
+.+.+.|+++ ++. +..|++|+|+|+++..... +. .++.+++..+++++||.+.||..|+. .++
T Consensus 311 ~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~ 387 (410)
T 3e2y_A 311 DRMVRLLNSV-GLK-PIVPDGGYFIIADVSSLGA-DLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKL 387 (410)
T ss_dssp HHHHHHHHTT-TCE-EEBCSBSSEEEEECGGGCC-CCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTE
T ss_pred HHHHHHHHHC-CCe-ecCCCccEEEEEEchhhhc-ccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCE
Confidence 9999999988 676 4678999999998864210 11 01347777788899999999998863 589
Q ss_pred EEEEeecChHHHHHHHHHHHH
Q 042445 217 LRITFAVEPSALENGLGRMKA 237 (246)
Q Consensus 217 iRls~~~~~~~l~~~~~~l~~ 237 (246)
+|++++.+++++++++++|.+
T Consensus 388 iRis~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 388 VRFCFIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp EEEECCCCHHHHHHHHHHHHT
T ss_pred EEEEEcCCHHHHHHHHHHHHh
Confidence 999999999999999999875
No 30
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=1.6e-33 Score=241.43 Aligned_cols=221 Identities=18% Similarity=0.289 Sum_probs=177.0
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC--------cccEEEEccccccccc
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS--------IVPLLTLGSISKRGIV 83 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--------~~~~i~~~s~sK~~~~ 83 (246)
++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..+.. .++++++.|+||.||+
T Consensus 193 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~ 272 (428)
T 1iay_A 193 ILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGL 272 (428)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSC
T ss_pred EEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCC
Confidence 77899999999999999999999999999999999999998887654444444432 4789999999999999
Q ss_pred CCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhch--HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 042445 84 PGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTE--EEFFSKIIDILRETADKCCDRLKEIP 161 (246)
Q Consensus 84 ~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~ 161 (246)
+|+|+||+++++. ++++.+......+ ++|+++|.++..+++... +.++++.++.++++++.+.+.|+++
T Consensus 273 ~Glr~G~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 343 (428)
T 1iay_A 273 PGFRVGIIYSFND-------DVVNCARKMSSFG-LVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV- 343 (428)
T ss_dssp GGGCEEEEEESCH-------HHHHHHHHHHTTS-CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCceEEEEEeCCH-------HHHHHHHHHHhcc-cCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999999999542 7888887665443 789999999999998643 3578899999999999999999988
Q ss_pred CCccccCCCCceEEEEEeccccccCC-CChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEee-cChHHHHHHHHHHHH
Q 042445 162 CITCPKKPEGSMFVMVKLNYSLLEGI-NSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFA-VEPSALENGLGRMKA 237 (246)
Q Consensus 162 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~-~~~~~l~~~~~~l~~ 237 (246)
++. +..+.+|+|+|++++....... .+..++...+++++||.+.||..|+. ++++|++++ .+++++++++++|.+
T Consensus 344 g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~ 422 (428)
T 1iay_A 344 GIK-CLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRR 422 (428)
T ss_dssp TCC-BCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHH
T ss_pred CCc-ccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHH
Confidence 666 4567789999998864210000 01234445444456999999988865 689999999 699999999999999
Q ss_pred HHHHH
Q 042445 238 FYDRH 242 (246)
Q Consensus 238 ~~~~~ 242 (246)
++++.
T Consensus 423 ~l~~~ 427 (428)
T 1iay_A 423 FVGVE 427 (428)
T ss_dssp HHHTT
T ss_pred HHhcc
Confidence 98653
No 31
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=5.4e-34 Score=241.15 Aligned_cols=222 Identities=19% Similarity=0.243 Sum_probs=181.8
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccC-CcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG-SIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s 76 (246)
|.+++.+.++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++.++.++..+. ..++++++.|
T Consensus 154 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s 233 (386)
T 1u08_A 154 QEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSS 233 (386)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEE
T ss_pred HHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEec
Confidence 3455555433 7789999999999999999999999999999999999999998765555554443 3468899999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
+||.|+++|+|+||+++++ ++++.+..... ..++++++.|.++..+|+.. +.++++.++.++++++.+.+
T Consensus 234 ~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~ 304 (386)
T 1u08_A 234 FGKTYHMTGWKVGYCVAPA--------PISAEIRKVHQYLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVN 304 (386)
T ss_dssp HHHHTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHH
T ss_pred chhhcCCcccceEEEEcCH--------HHHHHHHHHHHhhccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988 88888877643 34478899999999999854 67889999999999999999
Q ss_pred HhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC----CCCeEEEEeecChHHHHHH
Q 042445 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG----LKDWLRITFAVEPSALENG 231 (246)
Q Consensus 156 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~----~~~~iRls~~~~~~~l~~~ 231 (246)
.|+++ ++. +..|.+|+|+|++++... ..+..++...+++++||.+.||..|+ .++++|++++.++++++++
T Consensus 305 ~L~~~-g~~-~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~ 379 (386)
T 1u08_A 305 ALNES-RLE-ILPCEGTYFLLVDYSAVS---TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAA 379 (386)
T ss_dssp HTTSS-SCE-ECCCCBSSEEEEECTTTC---CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHH
T ss_pred HHHHC-CCe-ecCCCceEEEEEecCCCC---CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHH
Confidence 99987 676 467888999999886420 01355666666678999999998875 3689999999889999999
Q ss_pred HHHHHH
Q 042445 232 LGRMKA 237 (246)
Q Consensus 232 ~~~l~~ 237 (246)
+++|.+
T Consensus 380 ~~~l~~ 385 (386)
T 1u08_A 380 AERLRQ 385 (386)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 998864
No 32
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=6.3e-34 Score=243.98 Aligned_cols=228 Identities=18% Similarity=0.283 Sum_probs=184.4
Q ss_pred hhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccC-CcccEEEEccc
Q 042445 3 LINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG-SIVPLLTLGSI 77 (246)
Q Consensus 3 ~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~ 77 (246)
.+++.++++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++.++.++..+. ..++++++.|+
T Consensus 174 ~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~ 253 (429)
T 1yiz_A 174 ELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSA 253 (429)
T ss_dssp HHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEH
T ss_pred HHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecc
Confidence 445555433 7789999999999999999999999999999999999999998776555655553 45689999999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhh-----ch-HHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEK-----TE-EEFFSKIIDILRETA 150 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~-----~~-~~~~~~~~~~~~~~~ 150 (246)
||.|+++|+|+||+++++ ++++.+..... .+++++++.|.++..+|+. .. +.++++.++.+++++
T Consensus 254 sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (429)
T 1yiz_A 254 GKTFSLTGWKIGWAYGPE--------ALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKR 325 (429)
T ss_dssp HHHHTCGGGCCEEEESCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred hhccCCCCcceEEEEeCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHH
Confidence 999999999999999988 88888876643 3457899999999999986 32 567899999999999
Q ss_pred HHHHHHhhcCCCCccccCCCCceEEEEEeccccc-------cCCCChHHHHHHHHHhcCeEEecCCCcCC-------CCe
Q 042445 151 DKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL-------EGINSDMEFALKLAKEESVIVLPGITVGL-------KDW 216 (246)
Q Consensus 151 ~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------~~~ 216 (246)
+.+.+.|+++ ++. +..|.+|+|+|++++.... ++..+..+++..+++++||.+.||..|+. +++
T Consensus 326 ~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~ 403 (429)
T 1yiz_A 326 DYMASFLAEV-GMN-PTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDF 403 (429)
T ss_dssp HHHHHHHHHH-TCE-EEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTE
T ss_pred HHHHHHHHhC-CCc-ccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCe
Confidence 9999999887 666 4567889999998874210 00012445555566689999999988763 689
Q ss_pred EEEEeecChHHHHHHHHHHHHHHH
Q 042445 217 LRITFAVEPSALENGLGRMKAFYD 240 (246)
Q Consensus 217 iRls~~~~~~~l~~~~~~l~~~~~ 240 (246)
+|++++.+++++++++++|.++++
T Consensus 404 iRis~~~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 404 VRYCFFKKDENLQKAAEILRKWKG 427 (429)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHSC
T ss_pred EEEEecCCHHHHHHHHHHHHHhcc
Confidence 999999999999999999998764
No 33
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=3.6e-33 Score=236.11 Aligned_cols=215 Identities=19% Similarity=0.242 Sum_probs=181.1
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC--cccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS--IVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++..+.++..+.. .++++++.|+||.++++|+|+|
T Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G 248 (391)
T 4dq6_A 169 ILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSS 248 (391)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCE
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceE
Confidence 78899999999999999999999999999999999999999988766666666654 4789999999999999999999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHHhh--hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCccc
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIFLN--ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKE-IPCITCP 166 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~ 166 (246)
|+++++. ++++.+..... .++++|++.+.++..++.. .+.++++.++.++++++.+.+.|++ +|++. +
T Consensus 249 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~ 319 (391)
T 4dq6_A 249 YVVLPDE-------KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLK-V 319 (391)
T ss_dssp EEECCSH-------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-E
T ss_pred EEEeCCH-------HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-e
Confidence 9999863 67777776633 2337889999999998885 3678999999999999999999988 78887 5
Q ss_pred cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHHHHHHHH
Q 042445 167 KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLGRMKAFY 239 (246)
Q Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~~l~~~~ 239 (246)
..|.+++++|++++.... +..++...+++++||.+.||..|+. ++++|++++.+++++++++++|.+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 320 RKPEGTYLLWVDFSALGL----SDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp CCCSBSSEEEEECGGGCC----CHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred cCCCccEEEEEEhhhcCC----CHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 688999999998875211 3555655555445999999998876 59999999999999999999999876
No 34
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=2.4e-33 Score=240.01 Aligned_cols=226 Identities=16% Similarity=0.232 Sum_probs=189.0
Q ss_pred hhhhhhhc-cc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC--cccEEEE
Q 042445 2 ELINQDIT-RE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS--IVPLLTL 74 (246)
Q Consensus 2 e~~~~~~~-~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~ 74 (246)
|.+++.++ ++ ++++|+||||.+++.+++++|.++|++||+++|+||+|.++.+++..+.++..+.+ .++++++
T Consensus 184 ~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 263 (421)
T 3l8a_A 184 EQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIIL 263 (421)
T ss_dssp HHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEE
T ss_pred HHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEE
Confidence 45666665 33 78999999999999999999999999999999999999999998866666666644 4789999
Q ss_pred cccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHh-hh-cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 042445 75 GSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFL-NI-SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADK 152 (246)
Q Consensus 75 ~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (246)
.|+||.|+++|+|+||+++++. ++.+.+.... .. ++++|++++.++.+++.. .+.++++.++.++++++.
T Consensus 264 ~s~sK~~g~~G~~~G~~~~~~~-------~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~ 335 (421)
T 3l8a_A 264 SSATKTFNIAGTKNSFAIIQNE-------SLRRKFQYRQLANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKL 335 (421)
T ss_dssp ECSHHHHTCGGGCCEEEECCSH-------HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHH
T ss_pred EeChhhccCchhheEeEEcCCH-------HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999842 8888887664 22 337899999999999985 467899999999999999
Q ss_pred HHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHH
Q 042445 153 CCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEN 230 (246)
Q Consensus 153 l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~ 230 (246)
+.+.|++++++. +..|.+++++|++++.... +..++...+++++||.+.||..|+. ++++|++++.+++++++
T Consensus 336 l~~~L~~~~~i~-~~~~~~~~~~~v~~~~~~~----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~ 410 (421)
T 3l8a_A 336 VIKELEAKTKIK-VMEPEGTYLVWLDFSAYAI----AQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQE 410 (421)
T ss_dssp HHHHHHHHCSCE-EECCSBSSEEEEECGGGTC----CTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHH
T ss_pred HHHHHHhCCCce-EeCCCeeEEEEEeccccCC----CHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHH
Confidence 999998877777 5788999999998875311 3456666666678999999998875 79999999999999999
Q ss_pred HHHHHHHHHH
Q 042445 231 GLGRMKAFYD 240 (246)
Q Consensus 231 ~~~~l~~~~~ 240 (246)
++++|.++++
T Consensus 411 ~l~~l~~~l~ 420 (421)
T 3l8a_A 411 ALSRIISVFG 420 (421)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 35
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=5.3e-33 Score=235.37 Aligned_cols=227 Identities=17% Similarity=0.231 Sum_probs=182.0
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.++. + ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++..+.++..++....-. +.|
T Consensus 152 ~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s 230 (390)
T 1d2f_A 152 GKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTS 230 (390)
T ss_dssp HHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EEC
T ss_pred HHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccC
Confidence 445555543 2 6689999999999999999999999999999999999999998776555655554321012 999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh--hcC-CCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN--ISS-DPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~--~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
+||.|+++|+|+||+++++. ++++.+..... ..+ ++|++.|.++.+++.. .+.++++.++.++++++.+
T Consensus 231 ~sK~~~~~G~r~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l 302 (390)
T 1d2f_A 231 GSKSFNIPALTGAYGIIENS-------SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYI 302 (390)
T ss_dssp SHHHHTCGGGCCEEEEECSH-------HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHH
T ss_pred ccHhhcccChhheEEEECCH-------HHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999742 77888876643 332 7799999999888884 3678899999999999999
Q ss_pred HHHhhc-CCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHH
Q 042445 154 CDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEN 230 (246)
Q Consensus 154 ~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~ 230 (246)
.+.|++ +|++. +..|.+++++|++++... . +..++...+++++||.+.||..|+. ++++|++++.+++++++
T Consensus 303 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~---~-~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~ 377 (390)
T 1d2f_A 303 ADKMNAAFPELN-WQIPQSTYLAWLDLRPLN---I-DDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEK 377 (390)
T ss_dssp HHHHHHHCSSCC-CCCCSBCSEEEEECGGGC---C-CHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHH
T ss_pred HHHHHhhCCCCE-EecCCccEEEEEEccccC---C-CHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHH
Confidence 999998 78877 567888999999886431 1 3455555554478999999998863 78999999998899999
Q ss_pred HHHHHHHHHHHH
Q 042445 231 GLGRMKAFYDRH 242 (246)
Q Consensus 231 ~~~~l~~~~~~~ 242 (246)
++++|.++++++
T Consensus 378 ~l~~l~~~l~~~ 389 (390)
T 1d2f_A 378 GVAGLINAIRAV 389 (390)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999998765
No 36
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-33 Score=240.21 Aligned_cols=228 Identities=21% Similarity=0.322 Sum_probs=184.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC-cccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS-IVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s 76 (246)
+.+++.++++ ++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..++. .++++++.|
T Consensus 151 ~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s 230 (411)
T 2o0r_A 151 DALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISS 230 (411)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEE
T ss_pred HHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEee
Confidence 3455555443 77899999999999999999999999999999999999999987655555555543 567899999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
+||.|+++|+|+||+++++ ++++.+..... .+++.+++.|.++..+|+.. +.++++.++.++++++.+.+
T Consensus 231 ~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~ 301 (411)
T 2o0r_A 231 AAKMFNCTGWKIGWACGPA--------ELIAGVRAAKQYLSYVGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAA 301 (411)
T ss_dssp HHHHTTCTTTCEEEEECCH--------HHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCccceEEEEeeCH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 88888876643 34477889999999999854 77889999999999999999
Q ss_pred HhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC-------------CCCeEEEEee
Q 042445 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG-------------LKDWLRITFA 222 (246)
Q Consensus 156 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-------------~~~~iRls~~ 222 (246)
.|+++ ++. +..|.+|+|+|++++... + .+..++...+++++||.+.||..|. .++++|++++
T Consensus 302 ~L~~~-g~~-~~~~~~g~~~~~~~~~~~--~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~ 376 (411)
T 2o0r_A 302 GLTEI-GFA-VHDSYGTYFLCADPRPLG--Y-DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC 376 (411)
T ss_dssp HHHHH-TCE-ECCCCBSSEEEEECGGGT--C-CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC
T ss_pred HHHHc-CCE-ecCCCeeEEEEEecCCCC--C-CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec
Confidence 99887 666 467788999999886420 0 1355666666678899999998873 2478999999
Q ss_pred cChHHHHHHHHHHHHHHHHHh
Q 042445 223 VEPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 223 ~~~~~l~~~~~~l~~~~~~~~ 243 (246)
.+++++++++++|.+++++.+
T Consensus 377 ~~~e~i~~~~~~l~~~~~~~~ 397 (411)
T 2o0r_A 377 KRDDTLDEAIRRLSVLAERPA 397 (411)
T ss_dssp SCHHHHHHHHHHHGGGGC---
T ss_pred CCHHHHHHHHHHHHHHHhccC
Confidence 889999999999998876554
No 37
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=2.5e-33 Score=236.06 Aligned_cols=207 Identities=20% Similarity=0.281 Sum_probs=174.5
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccC-----CcccEEEEcccccccccCCc
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG-----SIVPLLTLGSISKRGIVPGL 86 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~g~ 86 (246)
++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++.........+ ..++++++.|+||.||++|+
T Consensus 159 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~ 238 (376)
T 3ezs_A 159 ILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGL 238 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGG
T ss_pred EEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccc
Confidence 7789999999999999999999999999999999999999998874333322221 45689999999999999999
Q ss_pred eEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 042445 87 RLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITC 165 (246)
Q Consensus 87 r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 165 (246)
|+||+++++ ++++.+..... .++++|++.|.++..++.. ..++++.++.++++++.+.+.|+ ++
T Consensus 239 r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~---~~-- 303 (376)
T 3ezs_A 239 RSGFIAGDS--------RLLEKYKAFRAYLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK---NT-- 303 (376)
T ss_dssp CCEEEEECH--------HHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST---TC--
T ss_pred eeEEEeeCH--------HHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc---CC--
Confidence 999999988 89999887744 3457899999999999984 45688999999999999999987 33
Q ss_pred ccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC----CCCeEEEEeecChHHHHHHHHHHHHHHHH
Q 042445 166 PKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG----LKDWLRITFAVEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 166 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~----~~~~iRls~~~~~~~l~~~~~~l~~~~~~ 241 (246)
..|.+|+|+|++++ +..++...+++++||.+.||..|+ .++++|++++.+++++++++++|.+++++
T Consensus 304 -~~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 304 -LIYPYSFYVYLPVQ--------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp -CCCSBSSEEEEECS--------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHCC
T ss_pred -CCCCcceEEEEECC--------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 36789999999886 256666666655999999999987 27899999988999999999999998865
Q ss_pred H
Q 042445 242 H 242 (246)
Q Consensus 242 ~ 242 (246)
+
T Consensus 375 ~ 375 (376)
T 3ezs_A 375 H 375 (376)
T ss_dssp -
T ss_pred c
Confidence 3
No 38
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=9.3e-33 Score=235.02 Aligned_cols=217 Identities=20% Similarity=0.310 Sum_probs=180.5
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++..+.++..++..+++++++|+||.++ +|+|+||+
T Consensus 180 ~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~ 258 (407)
T 2zc0_A 180 TIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWI 258 (407)
T ss_dssp ECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEE
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEE
Confidence 36789999999999999999999999999999999999999887655556666665568999999999998 99999999
Q ss_pred EeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhch-H-HHHHHHHHHHHHHHHHHHHHhhc-CCCCcccc
Q 042445 92 VTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTE-E-EFFSKIIDILRETADKCCDRLKE-IPCITCPK 167 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~-~-~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~ 167 (246)
++++ ++++.+..... .+.+.+++.|.++..+++... + .++++.++.++++++.+.+.|++ .+++. +.
T Consensus 259 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~ 329 (407)
T 2zc0_A 259 IAEG--------EILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAE-FT 329 (407)
T ss_dssp ECCH--------HHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSC-BC
T ss_pred ecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCE-Ee
Confidence 9987 89998887644 334679999999999998642 4 67888899999999999999987 67766 45
Q ss_pred CCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC----CCeEEEEeec-ChHHHHHHHHHHHHHHHHH
Q 042445 168 KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KDWLRITFAV-EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~iRls~~~-~~~~l~~~~~~l~~~~~~~ 242 (246)
.|.+|+|+|++++... +..++...+++++||.+.||..|.. ++++|++++. +++++++++++|.+++++.
T Consensus 330 ~~~~~~~~~~~~~~~~-----~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 330 KPIAGMFVMFFLPEGA-----DGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp CCSBSSEEEEECSTTC-----CHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEEcCCCC-----CHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 6888999999886421 3555655555445999999988853 6899999997 7899999999999999876
Q ss_pred h
Q 042445 243 A 243 (246)
Q Consensus 243 ~ 243 (246)
.
T Consensus 405 ~ 405 (407)
T 2zc0_A 405 F 405 (407)
T ss_dssp C
T ss_pred h
Confidence 4
No 39
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=5.3e-33 Score=235.48 Aligned_cols=217 Identities=23% Similarity=0.396 Sum_probs=179.5
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC-cccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS-IVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s 76 (246)
|.+++.++++ ++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++ .+.++..++. .++++++.|
T Consensus 165 ~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s 243 (389)
T 1o4s_A 165 EEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYING 243 (389)
T ss_dssp HHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEE
T ss_pred HHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEee
Confidence 3455555433 778999999999999999999999999999999999999998875 3334444433 467899999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
+||.|+++|+|+||+++++ ++++.+..... .+++++++.|.++..+|... +++.++.++++++.+.+
T Consensus 244 ~sK~~~~~G~r~G~l~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~l~~ 311 (389)
T 1o4s_A 244 FSKSHSMTGWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYAALKALEVD----NSYMVQTFKERKNFVVE 311 (389)
T ss_dssp STTTTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHH
T ss_pred chhhcCCcccceEEEEeCH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHH
Confidence 9999999999999999988 88888877643 34478999999999999864 77888889999999999
Q ss_pred HhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHH
Q 042445 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRM 235 (246)
Q Consensus 156 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l 235 (246)
.|+++ ++. +..|.+++++|++++ . +..++...+++++||.+.||..|+.++++|++++.+++++++++++|
T Consensus 312 ~L~~~-g~~-~~~~~~~~~~~~~~~-~------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l 382 (389)
T 1o4s_A 312 RLKKM-GVK-FVEPEGAFYLFFKVR-G------DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRI 382 (389)
T ss_dssp HHHHT-TCC-CCCCSBSSEEEEECS-S------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHH
T ss_pred HHHhc-CCe-eecCCcceEEEEeCC-C------CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHH
Confidence 99987 676 456888999998886 1 35566555555899999999988877899999999899999999999
Q ss_pred HHHHH
Q 042445 236 KAFYD 240 (246)
Q Consensus 236 ~~~~~ 240 (246)
.++++
T Consensus 383 ~~~l~ 387 (389)
T 1o4s_A 383 EDFLN 387 (389)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98874
No 40
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=5e-33 Score=238.37 Aligned_cols=225 Identities=13% Similarity=0.107 Sum_probs=181.1
Q ss_pred hhhhhhhc-cc----ccc-CCcCCCccCCChhhHHHHHHHH-HHcCCEEEEccccCCcccCCCCCc--ccccc----CCc
Q 042445 2 ELINQDIT-RE----FSD-FQVFHVGSGFSGSFVSPIAETA-KKLGIMVIANEVYGHLAFGNTPFV--SMGVF----GSI 68 (246)
Q Consensus 2 e~~~~~~~-~~----~~~-~p~NPtG~~~~~~~~~~l~~~~-~~~~~~ii~De~y~~~~~~~~~~~--~~~~~----~~~ 68 (246)
|.+++.++ ++ +++ +||||||.++|.+++++|+++| ++||+++|+||+|.++.+++.+.. ++..+ +..
T Consensus 170 ~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
T 3ppl_A 170 DAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNP 249 (427)
T ss_dssp HHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCT
T ss_pred HHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCC
Confidence 45566553 22 333 7799999999999999999999 999999999999999888764422 33332 355
Q ss_pred ccEEEEcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhh-ch-HHHHHHHHHH
Q 042445 69 VPLLTLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEK-TE-EEFFSKIIDI 145 (246)
Q Consensus 69 ~~~i~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~-~~-~~~~~~~~~~ 145 (246)
+++++++||||. +++|+|+||+++++ ++++.+..... .+.+++++.|.++..++.. .. +.++++.++.
T Consensus 250 ~~~i~~~S~SK~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 320 (427)
T 3ppl_A 250 NRFWAFTSTSKI-TLAGAGVSFFLTSA--------ENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAAS 320 (427)
T ss_dssp TSEEEEEESTTT-SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHH
T ss_pred CcEEEEechhhc-cCcCccEEEEEcCH--------HHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHH
Confidence 789999999999 89999999999998 99998887743 4558899999999999996 22 5788999999
Q ss_pred HHHHHHHHHHHhhc-CC---CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEec-CCCcC-----CCC
Q 042445 146 LRETADKCCDRLKE-IP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP-GITVG-----LKD 215 (246)
Q Consensus 146 ~~~~~~~l~~~L~~-~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~-----~~~ 215 (246)
++++++.+.+.|++ ++ ++. +..|++|+|+|++++.. +.+.+.+.+.++||.+.| |..|+ .++
T Consensus 321 ~~~~~~~l~~~L~~~l~~~~~~~-~~~p~~g~~~~~~~~~~-------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~ 392 (427)
T 3ppl_A 321 LAPKFNKVLEILDSRLAEYGVAQ-WTVPAGGYFISLDVVPG-------TASRVAELAKEAGIALTGAGSSYPLRQDPENK 392 (427)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCE-ECCCSBSSCEEEECSTT-------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSC
T ss_pred HHHHHHHHHHHHHHhcCCCCceE-EeCCCccEEEEEECCcc-------hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCC
Confidence 99999999998865 33 354 56889999999988753 234446678899999999 55554 268
Q ss_pred eEEEEeec-ChHHHHHHHHHHHHHHHHHh
Q 042445 216 WLRITFAV-EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 216 ~iRls~~~-~~~~l~~~~~~l~~~~~~~~ 243 (246)
++|+|++. +++++++++++|.+++++..
T Consensus 393 ~~Ris~~~~~~~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 393 NLRLAPSLPPVEELEVAMDGVATCVLLAA 421 (427)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999997 88999999999999988754
No 41
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=8.7e-33 Score=237.01 Aligned_cols=221 Identities=14% Similarity=0.179 Sum_probs=179.3
Q ss_pred hhhhhhhcc---c----cccCCcCCCccCCChhhHHHHHHHHHH-----cCCEEEEccccCCcccCCCCCcccc-ccCC-
Q 042445 2 ELINQDITR---E----FSDFQVFHVGSGFSGSFVSPIAETAKK-----LGIMVIANEVYGHLAFGNTPFVSMG-VFGS- 67 (246)
Q Consensus 2 e~~~~~~~~---~----~~~~p~NPtG~~~~~~~~~~l~~~~~~-----~~~~ii~De~y~~~~~~~~~~~~~~-~~~~- 67 (246)
|.+++.+++ + ++++||||||.+++.+++++|+++|++ +|+++|+||+|.++.+++.++.++. .+..
T Consensus 177 ~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 256 (430)
T 2x5f_A 177 DSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNL 256 (430)
T ss_dssp HHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTT
T ss_pred HHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhc
Confidence 455555543 2 789999999999999999999999999 9999999999999998765444543 4432
Q ss_pred ccc---EEEEcccccccccCCceEEEEEe---eCCCCCcchhhHHHHHHHHhh-----hcCCCCchHHHHHHHHHh-hch
Q 042445 68 IVP---LLTLGSISKRGIVPGLRLGWLVT---SDPNGILQDSGIVDSIKIFLN-----ISSDPATFIQGAVPQILE-KTE 135 (246)
Q Consensus 68 ~~~---~i~~~s~sK~~~~~g~r~G~i~~---~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~q~~~~~~l~-~~~ 135 (246)
.++ +++++|+||.|+++|+|+||+++ ++ ++++.+..... .++++|++.|.++..+|+ ...
T Consensus 257 ~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 328 (430)
T 2x5f_A 257 HSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQ--------TTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQ 328 (430)
T ss_dssp CCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCH--------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHH
T ss_pred cCCcceEEEEEecccCCCCCCCCeEEEEEecCCH--------HHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChH
Confidence 457 89999999999999999999999 77 88888876543 345789999999999998 652
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhh----cCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCC
Q 042445 136 -EEFFSKIIDILRETADKCCDRLK----EIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT 210 (246)
Q Consensus 136 -~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~ 210 (246)
.+.+++.++.++++++.+.+.|+ +. ++. +..|.+|+|+|++++ .. +..++...+++++||.+.||
T Consensus 329 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~-~~~~~~g~~~~~~~~-~~-----~~~~~~~~l~~~~gi~v~~g-- 398 (430)
T 2x5f_A 329 FDKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQ-AYDFNSGYFMAIKVH-DV-----DPEALRKHLIDKYSIGVIAL-- 398 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEE-ECCCCBSSEEEEEES-SS-----CHHHHHHHHHHHHCEECEEC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-Cce-eeCCCceEEEEeCCC-CC-----CHHHHHHHHHHhCCEEEecC--
Confidence 34455599999999999999998 44 565 567889999999987 21 35566555554599999998
Q ss_pred cCCCCeEEEEee-cChHHHHHHHHHHHHHHHHH
Q 042445 211 VGLKDWLRITFA-VEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 211 f~~~~~iRls~~-~~~~~l~~~~~~l~~~~~~~ 242 (246)
.++++|++++ .+++++++++++|.+++++.
T Consensus 399 --~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 399 --NATDIRIAFSCVEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp --SSSEEEEEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred --CCCeEEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 3689999999 68999999999999998764
No 42
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=9.8e-34 Score=240.91 Aligned_cols=203 Identities=14% Similarity=0.128 Sum_probs=158.5
Q ss_pred cccCC-cCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCC--CCcccccc-CCcccEEEEcccccccccCCce
Q 042445 12 FSDFQ-VFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNT--PFVSMGVF-GSIVPLLTLGSISKRGIVPGLR 87 (246)
Q Consensus 12 ~~~~p-~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~~~g~r 87 (246)
++|+| |||||.++|.+++++|+++|++||+++|+||+|.++.+++. ...++..+ ...+++|+++||||.|+++|+|
T Consensus 178 ~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlR 257 (405)
T 3k7y_A 178 ILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGER 257 (405)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTT
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCcccc
Confidence 56554 89999999999999999999999999999999999998642 12233333 2346899999999999999999
Q ss_pred EEEEEe--eCCCCCcchhhHHHHHHH----H-hhhcCCCCchHHHHHHHHHhhch-----HHHHHHHHHHHHHHHHHHHH
Q 042445 88 LGWLVT--SDPNGILQDSGIVDSIKI----F-LNISSDPATFIQGAVPQILEKTE-----EEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 88 ~G~i~~--~~~~~~~~~~~~~~~l~~----~-~~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~ 155 (246)
+||+++ ++. ++++.+.. . ...+++++.++|.++..+++++. .+++++.++.++++|+.+.+
T Consensus 258 iG~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~ 330 (405)
T 3k7y_A 258 AGALHIVCKNQ-------EEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFN 330 (405)
T ss_dssp EEEEEEECSSH-------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCH-------HHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875 231 55555432 2 22344667899999999998642 34567778889999999999
Q ss_pred Hhh----cCC--C-CccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-ChHH
Q 042445 156 RLK----EIP--C-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-EPSA 227 (246)
Q Consensus 156 ~L~----~~~--~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-~~~~ 227 (246)
.|+ +++ + +. +..|+||||+|+.++. +++..+ +++||.+.||. |||++. ++++
T Consensus 331 ~L~~~~~~~g~~~~~~-~~~p~gg~f~~~~l~~----------~~~~~L-~~~gV~v~p~~--------Ris~a~~~~~~ 390 (405)
T 3k7y_A 331 KLETYQKKYNLNYDWN-VYKKQRGLFSFVPLLA----------KIAEHL-KTHHIYIINNG--------RINVSGITKNN 390 (405)
T ss_dssp HHHHHGGGGTCCCCGG-GGSSCCSSEEECGGGG----------GGTTTT-TTTTEECCTTS--------EEEGGGCCTTH
T ss_pred HHHhhhhhcCCCCCCc-cccCCceEEEecCCCH----------HHHHHH-HHCCEeecCCC--------eEEEeccCHHH
Confidence 999 763 1 44 5789999999976542 344555 89999999965 999985 8999
Q ss_pred HHHHHHHHHHHHHH
Q 042445 228 LENGLGRMKAFYDR 241 (246)
Q Consensus 228 l~~~~~~l~~~~~~ 241 (246)
+++++++|.+++++
T Consensus 391 i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 391 VDYIADKICLSLSQ 404 (405)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998864
No 43
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=7.1e-33 Score=235.08 Aligned_cols=223 Identities=19% Similarity=0.292 Sum_probs=173.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHH------cCCEEEEccccCCcccCCCCCccccccCCcccE
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKK------LGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPL 71 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~------~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 71 (246)
|.+++.++++ ++++||||||.+++.+++++|+++|++ ||+++|+||+|.++.+++....... ...+++
T Consensus 163 ~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~~~~ 240 (398)
T 3ele_A 163 DALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT--KYYDNT 240 (398)
T ss_dssp HHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG--GTCSSE
T ss_pred HHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH--hhcCCe
Confidence 3455555443 788999999999999999999999999 9999999999999998764433322 234588
Q ss_pred EEEcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh--hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 042445 72 LTLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN--ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRET 149 (246)
Q Consensus 72 i~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 149 (246)
++++|+||.|+++|+|+||+++++. ......+.+.+..... .+.+++++.|.++..++.... .++.++++
T Consensus 241 i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~~~~ 312 (398)
T 3ele_A 241 LVCYSYSKSLSLPGERIGYVLVPDE--VYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG------DINAYKEN 312 (398)
T ss_dssp EEEEESTTTSSCTTTCCEEEECCTT--STTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC------CHHHHHHH
T ss_pred EEEEehhhcCCCccceeEEEEEcch--hhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH------HHHHHHHH
Confidence 9999999999999999999999882 1100013344433322 134677799999888887532 35677888
Q ss_pred HHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHH
Q 042445 150 ADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALE 229 (246)
Q Consensus 150 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~ 229 (246)
++.+.+.|+++ ++. +..|.+++|+|++++.. +..++ .+.|.++||.+.||..|+.++++|++++.++++++
T Consensus 313 ~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~------~~~~~-~~~l~~~gi~v~~g~~~~~~~~iRis~~~~~e~i~ 383 (398)
T 3ele_A 313 RDLLYEGLTRI-GYH-CFKPDGAFYMFVKALED------DSNAF-CEKAKEEDVLIVAADGFGCPGWVRISYCVDREMIK 383 (398)
T ss_dssp HHHHHHHHHHH-TCC-EECCSBSSEEEEECSSS------CHHHH-HHHHHTTTEECEESGGGTCTTEEEEECCSCHHHHH
T ss_pred HHHHHHHHHHc-CCe-ecCCCeeEEEEEEcCCC------CHHHH-HHHHHHCCEEEeCccccCCCCeEEEEecCCHHHHH
Confidence 89999999887 666 56889999999988642 24444 55678999999999999888999999998999999
Q ss_pred HHHHHHHHHHHHHh
Q 042445 230 NGLGRMKAFYDRHA 243 (246)
Q Consensus 230 ~~~~~l~~~~~~~~ 243 (246)
+++++|.+++++++
T Consensus 384 ~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 384 HSMPAFEKIYKKYN 397 (398)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 44
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=4e-33 Score=237.04 Aligned_cols=214 Identities=17% Similarity=0.114 Sum_probs=169.4
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC-cccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS-IVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++....++..++. .++++++.|+||.|+++|+|+||
T Consensus 168 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~ 247 (400)
T 3asa_A 168 CLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGW 247 (400)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEE
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeE
Confidence 77899999999999999999999999999999999999998876543344555543 45789999999999999999999
Q ss_pred EEeeCCCCCcchhhH-------HHHHHHH-hh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 042445 91 LVTSDPNGILQDSGI-------VDSIKIF-LN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIP 161 (246)
Q Consensus 91 i~~~~~~~~~~~~~~-------~~~l~~~-~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 161 (246)
+++++ ++ ++.+... .. .+.++|++.|.++..+|+.. ++++.++.++++++.+.+.|+++
T Consensus 248 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~- 315 (400)
T 3asa_A 248 TVIPQ--------ELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLAT- 315 (400)
T ss_dssp EECCT--------TCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHT-
T ss_pred EeeCh--------hhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHC-
Confidence 99987 55 4544332 22 22368999999999999854 67888899999999999999987
Q ss_pred CCccccCCCCceEEEEE-eccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHHHHHHH
Q 042445 162 CITCPKKPEGSMFVMVK-LNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLGRMKAF 238 (246)
Q Consensus 162 ~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~~l~~~ 238 (246)
++. +..|.+|+|+|++ ++... ++.+++..+++++||.+.||..|+. ++++|+++..+++++++++++|.++
T Consensus 316 g~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~ 389 (400)
T 3asa_A 316 GFE-VFGGEHAPYLWVKPTQANI-----SDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMA 389 (400)
T ss_dssp TCE-EEECSSSSEEEEECCCTTC-----CTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC-
T ss_pred CCe-eeCCCCceEEEEeccCCCC-----CHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHH
Confidence 666 4567789999998 65321 2445666677778999999998864 6899999767899999999999999
Q ss_pred HHHHh
Q 042445 239 YDRHA 243 (246)
Q Consensus 239 ~~~~~ 243 (246)
++++.
T Consensus 390 ~~~~~ 394 (400)
T 3asa_A 390 PALQS 394 (400)
T ss_dssp -----
T ss_pred HHhhh
Confidence 87654
No 45
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=2.9e-32 Score=232.55 Aligned_cols=216 Identities=16% Similarity=0.213 Sum_probs=172.7
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.+++.+++++|+++|++||+++|+||+|..+..+. .+.... ....++++++.|||| ++++|+|+||+
T Consensus 185 ~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~~~~~-~~~~~~~i~~~s~sK-~~~~G~r~G~~ 261 (417)
T 3g7q_A 185 CVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IFSEAR-PLWNPNIILCMSLSK-LGLPGSRCGII 261 (417)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCC-CCCCTTEEEEEESGG-GTCTTSCCEEE
T ss_pred EECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cccccc-cCCCCCEEEEEechh-ccCCCcceEEE
Confidence 788999999999999999999999999999999999998643111 111111 123468999999999 59999999999
Q ss_pred EeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhch-HHHHHH-HHHHHHHHHHHHHHHhhc-CCC--Ccc
Q 042445 92 VTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTE-EEFFSK-IIDILRETADKCCDRLKE-IPC--ITC 165 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~-~~~~~~-~~~~~~~~~~~l~~~L~~-~~~--~~~ 165 (246)
++++ ++++.+..... .+++++++.|.++..+++... ..+..+ .++.++++++.+.+.|++ +++ +.
T Consensus 262 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~- 332 (417)
T 3g7q_A 262 IAND--------KTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCL- 332 (417)
T ss_dssp ECCH--------HHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCE-
T ss_pred EeCH--------HHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce-
Confidence 9988 99998887644 455789999999999998654 344444 778899999999999987 664 44
Q ss_pred ccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC---------CCeEEEEeecChHHHHHHHHHHH
Q 042445 166 PKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---------KDWLRITFAVEPSALENGLGRMK 236 (246)
Q Consensus 166 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---------~~~iRls~~~~~~~l~~~~~~l~ 236 (246)
+..|++|+|+|++++.... +..++ ...|.++||.+.||..|+. ++++|||++.+++++++++++|.
T Consensus 333 ~~~~~~g~~~~~~~~~~~~----~~~~l-~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l~ 407 (417)
T 3g7q_A 333 IHKPEGAIFLWLWFKDLPI----TTELL-YQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILA 407 (417)
T ss_dssp EECCCBSSEEEEECTTCSS----CHHHH-HHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHH
T ss_pred eeCCCcceEEEEEcCCCCC----CHHHH-HHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecCCHHHHHHHHHHHH
Confidence 4678999999998875211 34444 5556889999999998864 46999999999999999999999
Q ss_pred HHHHHHhh
Q 042445 237 AFYDRHAE 244 (246)
Q Consensus 237 ~~~~~~~~ 244 (246)
+++++..+
T Consensus 408 ~~l~~~~~ 415 (417)
T 3g7q_A 408 EEIERAWR 415 (417)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987654
No 46
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.1e-32 Score=234.84 Aligned_cols=231 Identities=23% Similarity=0.344 Sum_probs=181.6
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCccc-EEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVP-LLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~i~~~s 76 (246)
+.+++.++++ ++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ...++..++ .++ +++++|
T Consensus 165 ~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s 242 (406)
T 1xi9_A 165 DDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNG 242 (406)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEE
T ss_pred HHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEec
Confidence 3455555433 778999999999999999999999999999999999999998843 333454554 557 899999
Q ss_pred cccccccCCceEEEEE--eeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLV--TSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
+||.++++|+|+||++ +++. ... ++++.+.......+++|++.|.++.++|+.. ..++++.++.++++++.+.
T Consensus 243 ~sK~~~~~G~r~G~~~~~~~~~--~~~--~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~ 317 (406)
T 1xi9_A 243 LSKVYFATGWRLGYMYFVDPEN--KLS--EVREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIY 317 (406)
T ss_dssp STTTTCCGGGCCEEEEEECTTC--TTH--HHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCccEEEEEEEecCch--hHH--HHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 5541 000 4566666554332578999999999999643 4458888999999999999
Q ss_pred HHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHH
Q 042445 155 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGL 232 (246)
Q Consensus 155 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~ 232 (246)
+.|++++++. +..|.+|+++|++++... + .+..++...+++++||.+.||..|+. ++++|++++.+++++++++
T Consensus 318 ~~L~~~~~~~-~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~ 393 (406)
T 1xi9_A 318 KRLNEIPGIS-TTKPQGAFYIFPKIEVGP--W-KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAM 393 (406)
T ss_dssp HHHHTSTTEE-CCCCCBSSEECCEECSCS--C-SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHH
T ss_pred HHHHhCCCCe-eecCCeeEEEEEecCccC--C-CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHH
Confidence 9999987877 467888999998886410 0 13555655555689999999998875 7899999998899999999
Q ss_pred HHHHHHHHHHh
Q 042445 233 GRMKAFYDRHA 243 (246)
Q Consensus 233 ~~l~~~~~~~~ 243 (246)
++|.++++++.
T Consensus 394 ~~l~~~l~~~~ 404 (406)
T 1xi9_A 394 DRFEKFMKERL 404 (406)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 47
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.1e-32 Score=232.82 Aligned_cols=221 Identities=24% Similarity=0.363 Sum_probs=178.4
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++||||||.++|.+++++|+++|++||+++|+||+|.++.+ +....++..+ ..++++++.|+
T Consensus 143 ~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s~ 220 (381)
T 1v2d_A 143 SALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGSA 220 (381)
T ss_dssp HHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEEH
T ss_pred HHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEeec
Confidence 3455555433 7789999999999999999999999999999999999999887 4333344333 44688999999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTE-EEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~ 155 (246)
||.|+++|+|+||+++++ ++++.+..... .+++++++.|.++..+|.... +.++++.++.++++++.+.+
T Consensus 221 sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (381)
T 1v2d_A 221 GKRLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAG 292 (381)
T ss_dssp HHHTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987 78887776533 344789999999999998532 46788899999999999999
Q ss_pred HhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC----CCeEEEEeecChHHHHHH
Q 042445 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KDWLRITFAVEPSALENG 231 (246)
Q Consensus 156 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~iRls~~~~~~~l~~~ 231 (246)
.|++. ++. +..|.+|+|+|++++.. + +..++.++||.+.||..|+. ++++|++++.++++++++
T Consensus 293 ~L~~~-g~~-~~~~~~~~~~~~~~~~~-------~---~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~ 360 (381)
T 1v2d_A 293 GLRAM-GLR-VYVPEGTYFLMAELPGW-------D---AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLA 360 (381)
T ss_dssp HHHHT-TCC-EECCSBSSEEEEECTTC-------C---HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHH
T ss_pred HHHHC-CCE-ecCCCcceEEEEecChH-------h---HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHHHHHHH
Confidence 99886 676 45778899999887632 2 66778899999999988864 689999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 042445 232 LGRMKAFYDRHAE 244 (246)
Q Consensus 232 ~~~l~~~~~~~~~ 244 (246)
+++|.+++++.++
T Consensus 361 ~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 361 LERLGRVVNSPRE 373 (381)
T ss_dssp HHHHHHHC-----
T ss_pred HHHHHHHHhhccc
Confidence 9999999877654
No 48
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.7e-32 Score=241.39 Aligned_cols=217 Identities=16% Similarity=0.168 Sum_probs=168.6
Q ss_pred cccCCcCCCccCCChhhHHHHHHHH--HHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETA--KKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~--~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
+++|||||||.+++.+++++|+++| +++|++||+||+|.++.++ +.++.... .+++++++||||.||++|+|+|
T Consensus 250 ~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~i~~~S~SK~~g~~GlRiG 325 (546)
T 2zy4_A 250 FCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENTLLVYSFSKYFGATGWRLG 325 (546)
T ss_dssp EEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGEEEEEESTTTTTCGGGCEE
T ss_pred EEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCEEEEEeCccccCCCCcceE
Confidence 7889999999999999999999999 7899999999999998753 22333332 3589999999999999999999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH-------------h------------------------hhcCCCCchHHHHH-----
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF-------------L------------------------NISSDPATFIQGAV----- 127 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~-------------~------------------------~~~~~~~~~~q~~~----- 127 (246)
|+++++. ++++.+... . ..+.+++.+.|.++
T Consensus 326 ~~~~~~~-------~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~ 398 (546)
T 2zy4_A 326 VVAAHQQ-------NVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSL 398 (546)
T ss_dssp EEEEESS-------CHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHH
T ss_pred EEEECCH-------HHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHH
Confidence 9999882 366666321 0 11236788888774
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCCceEEEEEeccc----c-------ccCCCChHHHHHH
Q 042445 128 PQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYS----L-------LEGINSDMEFALK 196 (246)
Q Consensus 128 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~----~-------~~~~~~~~~~~~~ 196 (246)
..++.+ .+.+.++.++.++++++.+.+.|. + ++. ...|++|+|+|++++.- . ++...++.+++.+
T Consensus 399 ~all~~-~~~~~~~~r~~~~~r~~~l~~~L~-~-~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ 474 (546)
T 2zy4_A 399 FALMDE-ADEYKHTLKQLIRRRETTLYRELG-M-PPL-RDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFR 474 (546)
T ss_dssp HHHHCT-TCHHHHHHHHHHHHHHHHHHGGGT-S-SCC-CCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHhc-cHHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-cCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHH
Confidence 244543 367899999999999999999886 4 343 35778999999987520 0 0000125567788
Q ss_pred HHHhcCeEEecCCCcCC-CCeEEEEeec-ChHHHHHHHHHHHHHHHHHh
Q 042445 197 LAKEESVIVLPGITVGL-KDWLRITFAV-EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 197 ll~~~gi~v~pg~~f~~-~~~iRls~~~-~~~~l~~~~~~l~~~~~~~~ 243 (246)
++.++||.+.||..|+. ++++|++++. +++++++++++|+++++++.
T Consensus 475 ll~~~gV~v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 475 IADETGIVLLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp HHHHHSCCCEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999986 6789999997 88999999999999987765
No 49
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=2.6e-32 Score=233.49 Aligned_cols=225 Identities=16% Similarity=0.161 Sum_probs=180.8
Q ss_pred hhhhhhhc--cc----c-ccCCcCCCccCCChhhHHHHHHHH-HHcCCEEEEccccCCcccCC-C--CCcccccc----C
Q 042445 2 ELINQDIT--RE----F-SDFQVFHVGSGFSGSFVSPIAETA-KKLGIMVIANEVYGHLAFGN-T--PFVSMGVF----G 66 (246)
Q Consensus 2 e~~~~~~~--~~----~-~~~p~NPtG~~~~~~~~~~l~~~~-~~~~~~ii~De~y~~~~~~~-~--~~~~~~~~----~ 66 (246)
|.+++.++ ++ + .++||||||.+++.+++++|+++| ++||+++|+||+|..+.+.+ . .+.++..+ +
T Consensus 161 ~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 240 (423)
T 3ez1_A 161 DAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAG 240 (423)
T ss_dssp HHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHT
T ss_pred HHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccC
Confidence 45666662 32 2 458899999999999999999999 99999999999999766544 2 22233332 3
Q ss_pred CcccEEEEcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhh--ch-HHHHHHH
Q 042445 67 SIVPLLTLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEK--TE-EEFFSKI 142 (246)
Q Consensus 67 ~~~~~i~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~--~~-~~~~~~~ 142 (246)
..+++++++||||. +++|+|+||+++++ ++++.+..... .+++++++.|.++..++.+ .. ..++++.
T Consensus 241 ~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 311 (423)
T 3ez1_A 241 YPDRAFVFASTSKI-TFAGAGLGFVASSE--------DNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDH 311 (423)
T ss_dssp CTTSEEEEEESTTT-SCSSSSCEEEEECH--------HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHH
T ss_pred CCCeEEEEeCchhh-ccCCcceEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHH
Confidence 55789999999999 79999999999998 99999887744 3457899999999999986 33 5788888
Q ss_pred HHHHHHHHHHHHHHhhc-CCC----CccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEec-CCCcCC---
Q 042445 143 IDILRETADKCCDRLKE-IPC----ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP-GITVGL--- 213 (246)
Q Consensus 143 ~~~~~~~~~~l~~~L~~-~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~~--- 213 (246)
++.++++++.+.+.|.+ ++. +. +..|++|+|+|++++.. +.+.+.+++.++||.+.| |..|+.
T Consensus 312 ~~~~~~~~~~l~~~l~~~l~~~~~~~~-~~~p~~g~~~~~~~~~~-------~~~~~~~~l~~~gv~v~~~g~~~~~~~~ 383 (423)
T 3ez1_A 312 AAIIAPKFRAVDEVLRAELGEGGEYAT-WTLPKGGYFISLDTAEP-------VADRVVKLAEAAGVSLTPAGATYPAGQD 383 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSSEE-ECCCSBSSCEEEEESSS-------CHHHHHHHHHHTTEECCCTTTTSSTTCC
T ss_pred HHHHHHHHHHHHHHHHHhcCcCCCceE-EeCCCccEEEEEECCCC-------cHHHHHHHHHHCCcEEecCcccccCCCC
Confidence 99999999988888865 433 44 56889999999998753 345667788899999999 666652
Q ss_pred --CCeEEEEeec-ChHHHHHHHHHHHHHHHHHh
Q 042445 214 --KDWLRITFAV-EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 214 --~~~iRls~~~-~~~~l~~~~~~l~~~~~~~~ 243 (246)
++++||+++. +++++++++++|.+++++..
T Consensus 384 ~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 384 PHNRNLRLAPTRPPVEEVRTAMQVVAACIRLAT 416 (423)
T ss_dssp SSSCEEEECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6899999996 99999999999999998764
No 50
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.4e-31 Score=228.15 Aligned_cols=226 Identities=19% Similarity=0.277 Sum_probs=180.9
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++||||||.++|.+++++|+++|+++|+++|+||+|+++.+++.....+.. ..++++++.|+
T Consensus 165 ~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~--~~~~~i~~~s~ 242 (409)
T 2gb3_A 165 QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSI--ESDKVVVIDSV 242 (409)
T ss_dssp TTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGS--CCTTEEEEEES
T ss_pred HHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCcccc--CCCCEEEEecc
Confidence 4566655543 78899999999999999999999999999999999999998887632222221 13578999999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRL 157 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 157 (246)
||.|+++|+|+||+++++. ++++.+......+.+++++.|.++.++|+. ...++++.++.++++++.+.+.|
T Consensus 243 sK~~g~~G~r~G~~~~~~~-------~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L 314 (409)
T 2gb3_A 243 SKKFSACGARVGCLITRNE-------ELISHAMKLAQGRLAPPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKL 314 (409)
T ss_dssp TTTTTCGGGCCEEEECSCH-------HHHHHHHHHHHHSCCCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCccceEEEEEECcH-------HHHHHHHHHHhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999863 677777665433227899999999999975 36788999999999999999999
Q ss_pred hcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHh-----cCeEEecCCCcCC-----CCeEEEEeecChHH
Q 042445 158 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKE-----ESVIVLPGITVGL-----KDWLRITFAVEPSA 227 (246)
Q Consensus 158 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gi~v~pg~~f~~-----~~~iRls~~~~~~~ 227 (246)
+++ ++..+..|.+|+++|++++.. +..++...++++ +||.+.||..|+. ++++|++++.++++
T Consensus 315 ~~~-g~~~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~ 387 (409)
T 2gb3_A 315 EEH-GLKRFTKPSGAFYITAELPVE------DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDL 387 (409)
T ss_dssp HHT-TCCCBCCCSBSSEEEEECSSS------CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHH
T ss_pred HHc-CceeeeCCCeeEEEEEEeCCC------CHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHH
Confidence 987 666325788899999888621 355555555544 4999999988853 68999999988999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 042445 228 LENGLGRMKAFYDRHAE 244 (246)
Q Consensus 228 l~~~~~~l~~~~~~~~~ 244 (246)
+++++++|.++++++.+
T Consensus 388 i~~~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 388 LSRAIDVLMEGLKMFCS 404 (409)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999999987653
No 51
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=3.6e-32 Score=227.89 Aligned_cols=201 Identities=15% Similarity=0.194 Sum_probs=164.7
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccc-cCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGV-FGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++||||||.++|.+++++|+++|+ +|+++|+||+|.++... .++.. .+..++++++.|+||.|+++|+|+||
T Consensus 151 ~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~----~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~ 225 (356)
T 1fg7_A 151 YVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ----ASLAGWLAEYPHLAILRTLSKAFALAGLRCGF 225 (356)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG----GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEE
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC----CcHHHHHhhCCCEEEEecchHhhcCchhhhEE
Confidence 77899999999999999999999999 99999999999987621 12222 24456899999999999999999999
Q ss_pred EEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 042445 91 LVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPE 170 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 170 (246)
+++++ ++++.+......+ ++|++.|.++.++|.+....++++.++.++++++.+.+.|++++++. ...|.
T Consensus 226 ~~~~~--------~~~~~l~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~ 295 (356)
T 1fg7_A 226 TLANE--------EVINLLMKVIAPY-PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVE-QVFDS 295 (356)
T ss_dssp EEECH--------HHHHHHHHHSCSS-CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-EECCC
T ss_pred EEeCH--------HHHHHHHHhcCCC-CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-EECCC
Confidence 99987 8999888775544 78999999999999853323588999999999999999999886543 24567
Q ss_pred CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEec-CCCcCCCCeEEEEeecChHHHHHHHHHHHH
Q 042445 171 GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP-GITVGLKDWLRITFAVEPSALENGLGRMKA 237 (246)
Q Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~~~~~iRls~~~~~~~l~~~~~~l~~ 237 (246)
+|+|+|++++ +..++.. .|.++||.+.| |..|+.++++|++++ +++++++++++|++
T Consensus 296 ~~~~~~~~~~--------~~~~l~~-~L~~~gI~v~~~g~~~~~~~~iRis~~-~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 296 ETNYILARFK--------ASSAVFK-SLWDQGIILRDQNKQPSLSGCLRITVG-TREESQRVIDALRA 353 (356)
T ss_dssp SSSEEEEEET--------THHHHHH-HHHHTTEECEECTTSTTCTTEEEEECC-CHHHHHHHHHHHHT
T ss_pred CCeEEEEECC--------CHHHHHH-HHHHCCEEEEECCCCCCCCCeEEEEeC-CHHHHHHHHHHHHh
Confidence 8999999886 1445544 45789999999 888877789999998 56778888887764
No 52
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=2.2e-32 Score=230.04 Aligned_cols=217 Identities=24% Similarity=0.365 Sum_probs=177.8
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccC-CcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG-SIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s 76 (246)
|.+++.++++ ++++||||||.+++.+ |.++|++||+++|+||+|.++.+++. +.++..+. ..++++++.|
T Consensus 145 ~~l~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s 219 (370)
T 2z61_A 145 ESLEEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILING 219 (370)
T ss_dssp HHHHHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEE
T ss_pred HHHHHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEec
Confidence 4455555433 7789999999999976 99999999999999999999988763 33444442 3567899999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
+||.++++|+|+||+++++ ++++.+..... .++++|++.|.++.++|+...+.++++.++.++++++.+.+
T Consensus 220 ~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 291 (370)
T 2z61_A 220 FSKLYAMTGWRIGYVISND--------EIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLK 291 (370)
T ss_dssp STTTTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhccCCccceEEEEEECH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 9999989999999999998 89998877643 34478999999999999741267888999999999999999
Q ss_pred HhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHH
Q 042445 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLG 233 (246)
Q Consensus 156 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~ 233 (246)
.|+++ ++. +..|++|+++|++++. +..++...+++++||.+.||..|+. ++++|++++.++++++++++
T Consensus 292 ~L~~~-g~~-~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~~ 362 (370)
T 2z61_A 292 YVKDF-GWE-VNNPIGAYYVFPNIGE-------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLE 362 (370)
T ss_dssp HHHHT-TCB-CCCCCBTTEECCBCSS-------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHH
T ss_pred HHHHc-CCe-ecCCCcceEEEEecCC-------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHHH
Confidence 99988 676 4678889999987753 2556666555589999999998875 78999999998999999999
Q ss_pred HHHHHHH
Q 042445 234 RMKAFYD 240 (246)
Q Consensus 234 ~l~~~~~ 240 (246)
+|.++++
T Consensus 363 ~l~~~l~ 369 (370)
T 2z61_A 363 RIKEFLN 369 (370)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998874
No 53
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.5e-32 Score=241.47 Aligned_cols=233 Identities=16% Similarity=0.143 Sum_probs=177.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHH-HcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAK-KLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
+.+++.+.++ ++++||||||.++|.+++++|+++|+ +||+++|+||+|.++.++. .++.... .+++++++|
T Consensus 235 ~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~---~~~~~~~-~~~~i~~~S 310 (533)
T 3f6t_A 235 NEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF---KSIYSVV-PYNTMLVYS 310 (533)
T ss_dssp HHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC---CCHHHHS-GGGEEEEEE
T ss_pred HHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc---cCHhhcC-CCCEEEEec
Confidence 3455555543 77799999999999999999999999 6899999999999888653 2333332 368999999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHH--------------------------------HHHh-hhcCCCCchH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSI--------------------------------KIFL-NISSDPATFI 123 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l--------------------------------~~~~-~~~~~~~~~~ 123 (246)
|||.||++|+|+||+++++...+. .+++.+ .... ..+++++++.
T Consensus 311 ~SK~~g~~G~RiG~l~~~~~~~~~---~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~ 387 (533)
T 3f6t_A 311 YSKLFGCTGWRLGVIALNEKNVFD---DNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQ 387 (533)
T ss_dssp SHHHHTCGGGCEEEEEEESSCHHH---HHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHH
T ss_pred CcccCCCcccceEEEEECcHHHHH---HHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHH
Confidence 999999999999999998830000 132221 1121 2344778888
Q ss_pred HHH----HHHHHh-----hchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCCceEEEEEecccc--ccC------
Q 042445 124 QGA----VPQILE-----KTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSL--LEG------ 186 (246)
Q Consensus 124 q~~----~~~~l~-----~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~------ 186 (246)
|.+ +..+|. ...+.++++.++.++++++.+.+.|. + ++. +..|++|+|+|++++... ..+
T Consensus 388 q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~-~~~~~~g~~~~~~l~~~~~~~~g~~~~~~ 464 (533)
T 3f6t_A 388 QIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A-PKD-ETDTNTHYYSLIDIYRLAEKIYGKEFRDY 464 (533)
T ss_dssp HHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C-CCC-CSTTBCCSEEEEEHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-ccCCCceEEEEEehHhhhhhccchHHHHH
Confidence 888 445564 23468899999999999999999997 6 455 568899999999886310 000
Q ss_pred ---CCChHHHHHHHHHhcCeEEecCCCcCC-CCeEEEEeec-ChHHHHHHHHHHHHHHHHHhh
Q 042445 187 ---INSDMEFALKLAKEESVIVLPGITVGL-KDWLRITFAV-EPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 187 ---~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~iRls~~~-~~~~l~~~~~~l~~~~~~~~~ 244 (246)
..++.+++..+++++||.+.||..|+. ++++|+|++. +++++++++++|.++++++.+
T Consensus 465 ~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 465 LTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp HHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 013667888888899999999999987 7899999995 899999999999999987653
No 54
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=4.9e-32 Score=227.25 Aligned_cols=213 Identities=13% Similarity=0.150 Sum_probs=176.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++||||||.+++.+++.+|++.|++ |+++|+||+|.++.+ +.........+..++++++.|+
T Consensus 146 ~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~ 223 (363)
T 3ffh_A 146 EGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTF 223 (363)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEES
T ss_pred HHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeec
Confidence 4555555543 788999999999999999999988887 999999999999887 5444444445556789999999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRL 157 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 157 (246)
||.++++|+|+||+++++ ++++.+...... +++|++.+.++..+++. ..++++.++.++++++.+.+.|
T Consensus 224 sK~~g~~G~r~G~~~~~~--------~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l 292 (363)
T 3ffh_A 224 SKIYGLASARVGYGIADK--------EIIRQLNIVRPP-FNTTSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFA 292 (363)
T ss_dssp SSTTCCSSCCCEEEEECH--------HHHHHHHHTCCS-CCCBHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcCchhceeeeecCH--------HHHHHHHHhCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987 999988877554 38899999999999983 4788999999999999999999
Q ss_pred hcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHHHH
Q 042445 158 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRMKA 237 (246)
Q Consensus 158 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l~~ 237 (246)
++++++.. .+..|+|+|++++. +..++ .+.|.++||.+.||..|+.++++|++++ ++++++++++.|++
T Consensus 293 ~~~~g~~~--~~~~~~~~~~~~~~-------~~~~~-~~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~ 361 (363)
T 3ffh_A 293 KRFEKVKL--YPANGNFVLIDLGI-------EAGTI-FSYLEKNGYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEK 361 (363)
T ss_dssp HHCTTCEE--CCCCSSEEEEECSS-------CHHHH-HHHHHHTTEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHH
T ss_pred hhCCCceE--CCCCCeEEEEECCC-------CHHHH-HHHHHHCCeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHH
Confidence 98667763 35567888988763 14444 4556678999999999988999999998 88889999998877
Q ss_pred H
Q 042445 238 F 238 (246)
Q Consensus 238 ~ 238 (246)
+
T Consensus 362 ~ 362 (363)
T 3ffh_A 362 L 362 (363)
T ss_dssp H
T ss_pred h
Confidence 5
No 55
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.4e-31 Score=229.81 Aligned_cols=223 Identities=14% Similarity=0.081 Sum_probs=177.8
Q ss_pred hhhhhhh-ccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCc----cc-cccCC-ccc
Q 042445 2 ELINQDI-TRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFV----SM-GVFGS-IVP 70 (246)
Q Consensus 2 e~~~~~~-~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~----~~-~~~~~-~~~ 70 (246)
+.+++.+ +++ ++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++.... ++ ..+.. .++
T Consensus 172 ~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (437)
T 3g0t_A 172 EKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDN 251 (437)
T ss_dssp HHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSC
T ss_pred HHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCc
Confidence 4455555 332 6789999999999999999999999999999999999999888732111 11 33433 678
Q ss_pred EEEEcccccccccCCceEEEEEeeCCCCCcchhhHHH-H-----------------HHHHhh-hcCCCCchHHHHHHHHH
Q 042445 71 LLTLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVD-S-----------------IKIFLN-ISSDPATFIQGAVPQIL 131 (246)
Q Consensus 71 ~i~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~-~-----------------l~~~~~-~~~~~~~~~q~~~~~~l 131 (246)
++++.|+||.++++|+|+||+++++ ++++ . +..... .+++++++.|.++..++
T Consensus 252 ~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 323 (437)
T 3g0t_A 252 YILALSSSKAFSYAGQRIGVLMISG--------KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAML 323 (437)
T ss_dssp EEEEEESTTTTSCGGGCCEEEEECH--------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHH
T ss_pred EEEEEcCccCCCCccceeEEEEECH--------HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHH
Confidence 9999999999999999999999998 8888 6 655433 34588999999999999
Q ss_pred hhchHHH---HHHHHHHHHHHHHHHHHHhhcCCCCccc------cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcC
Q 042445 132 EKTEEEF---FSKIIDILRETADKCCDRLKEIPCITCP------KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEES 202 (246)
Q Consensus 132 ~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 202 (246)
... ..+ +++.++.++++++.+.+.|+++ ++..+ .++.+++|+|++++.. +..++ .+.|.++|
T Consensus 324 ~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l-~~~L~~~g 394 (437)
T 3g0t_A 324 KAC-NDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKGM------DSSKL-IEKFVRYG 394 (437)
T ss_dssp HHH-HTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEETTC------CHHHH-HHHHHHTT
T ss_pred hCc-HhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecCCC------CHHHH-HHHHHHcC
Confidence 852 223 8899999999999999999998 77632 1338999999998721 24455 45566789
Q ss_pred eEEecCCCcCC--CCeEEEEeec-ChHHHHHHHHHHHHHHHH
Q 042445 203 VIVLPGITVGL--KDWLRITFAV-EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 203 i~v~pg~~f~~--~~~iRls~~~-~~~~l~~~~~~l~~~~~~ 241 (246)
|.+.|+..|+. ++++|+|++. +++++++++++|.+++++
T Consensus 395 i~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 395 MCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred eEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 99999998876 3899999997 899999999999998754
No 56
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=1.6e-31 Score=224.37 Aligned_cols=207 Identities=17% Similarity=0.217 Sum_probs=166.2
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++.. .+..++..++++++.|+||.|+++|+|+||+
T Consensus 151 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 228 (364)
T 1lc5_A 151 FLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETG--FIPALKDNPHIWVLRSLTKFYAIPGLRLGYL 228 (364)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCC--SGGGCTTCTTEEEEEESTTTTTCTTTCCEEE
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccc--hhhHhccCCCEEEEEECchhhcCCccceEEE
Confidence 77899999999999999999999999999999999999998875322 2222344568899999999999999999999
Q ss_pred E-eeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 042445 92 V-TSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPE 170 (246)
Q Consensus 92 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 170 (246)
+ +++ ++++.+......+ ++|++.|.++.++|+. ..++++.++.++++++.+.+.|+++|++.. . +.
T Consensus 229 ~~~~~--------~~~~~l~~~~~~~-~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~-~~ 295 (364)
T 1lc5_A 229 VNSDD--------AAMARMRRQQMPW-SVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTV-Y-PG 295 (364)
T ss_dssp ECCCH--------HHHHHHHHHSCTT-CSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEE-C-CC
T ss_pred EECCH--------HHHHHHHHhCCCC-CCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCEE-C-CC
Confidence 9 777 8888887765433 7899999999999985 568999999999999999999998888763 3 45
Q ss_pred CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHHHHHHHHHHH
Q 042445 171 GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~~l~~~~~~~ 242 (246)
+|+|+|++++.. ..++. +.|.++||.+.||..|+. ++++|++++ ++++++++++.|++++++.
T Consensus 296 ~g~~~~~~~~~~-------~~~l~-~~l~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 296 RANYLLLRCERE-------DIDLQ-RRLLTQRILIRSCANYPGLDSRYYRVAIR-SAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp SSSEEEEEESCT-------TCCHH-HHHHTTTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHC---
T ss_pred CCeEEEEECCCc-------HHHHH-HHHHHCCcEEeeCcccCCCCCCEEEEEeC-CHHHHHHHHHHHHHHhhcc
Confidence 677888877631 22343 445578999999998854 689999988 4666777777777776654
No 57
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=1.8e-31 Score=223.40 Aligned_cols=207 Identities=14% Similarity=0.151 Sum_probs=166.2
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.+++.+++++|+++|++||+++|+||+|.++.++ .........+..++++++.|+||.++++|+|+||+
T Consensus 149 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~ 227 (361)
T 3ftb_A 149 IIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYG 227 (361)
T ss_dssp EEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEE
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEE
Confidence 88999999999999999999999999999999999999999887 33444444455678999999999999999999999
Q ss_pred E-eeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 042445 92 V-TSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPE 170 (246)
Q Consensus 92 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 170 (246)
+ .++ ++++.+......+ ++|++.+.++..+++. ..++++.++.++++++.+.+.|+++|++.. ..+.
T Consensus 228 ~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~ 295 (361)
T 3ftb_A 228 ITNNK--------EIAAKIKAKQNPW-NINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKR-VFSP 295 (361)
T ss_dssp EESCH--------HHHHHHHTTSCTT-CSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEE-EECC
T ss_pred EeCCH--------HHHHHHHhhCCCC-CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCce-ecCC
Confidence 9 666 8888888765544 8899999999999984 678999999999999999999999887751 2445
Q ss_pred CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHHHHHHHH
Q 042445 171 GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLGRMKAFY 239 (246)
Q Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~~l~~~~ 239 (246)
.|.|+|++++.. +..++ .+.|.++||.+.||..|+. ++++|++++ +++++++.++.|.++.
T Consensus 296 ~~~~~~~~~~~~------~~~~l-~~~l~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~ 358 (361)
T 3ftb_A 296 HANFVLCRLENI------SGEKL-YDSLLKEDIVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVE 358 (361)
T ss_dssp SSSEEEEEESSS------CHHHH-HHHHHTTTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCC------CHHHH-HHHHHHCCeEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHH
Confidence 577788888641 24455 4456667999999998875 689999998 4444444554444443
No 58
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=7.4e-32 Score=225.33 Aligned_cols=215 Identities=13% Similarity=0.168 Sum_probs=177.4
Q ss_pred hhhhhhhc--cc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCc-ccEEEE
Q 042445 2 ELINQDIT--RE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSI-VPLLTL 74 (246)
Q Consensus 2 e~~~~~~~--~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~i~~ 74 (246)
+.+++.++ ++ ++++||||||.+++.+++.+|+++| ++|+++|+||+|.++.+++.....+...+.. ++++++
T Consensus 130 ~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 208 (354)
T 3ly1_A 130 EGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILL 208 (354)
T ss_dssp HHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEE
T ss_pred HHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEE
Confidence 45666665 33 7789999999999999999999999 8999999999999998876544444444444 789999
Q ss_pred cccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 75 GSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 75 ~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
+|+||.|+++|+|+||+++++ ++++.+...... +++|++.+.++..+++. ..++++.++.++++++.+.
T Consensus 209 ~s~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~ 277 (354)
T 3ly1_A 209 KTFSKIHAMAGMRVGYAVAHP--------TVIALMGRYVAG-EKINFSGVDAALASMND--SAFITYSKKSNDVSRQILL 277 (354)
T ss_dssp EESSSTTCCGGGCCEEEECCH--------HHHHHHGGGTTC-SCCCHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHH
T ss_pred eeChhhccChhhhheeeecCH--------HHHHHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988 999988877555 48999999999999984 4788999999999999999
Q ss_pred HHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHH
Q 042445 155 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGR 234 (246)
Q Consensus 155 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~ 234 (246)
+.|+++ ++.. .+..|+|+|++++. +..++ .+.|.++||.+. |.+++.++++|++++ ++++++++++.
T Consensus 278 ~~l~~~-~~~~--~~~~~~~~~~~~~~-------~~~~~-~~~l~~~gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~ 344 (354)
T 3ly1_A 278 KALEDL-KLPY--LPSEGNFVFHQLVV-------PLKDY-QTHMADAGVLIG-RAFPPADNWCRISLG-TPQEMQWVADT 344 (354)
T ss_dssp HHHHHH-TCCB--CCCCSSEEEEECSS-------CHHHH-HHHHHHTTEECC-CCCTTCTTEEEEECC-CHHHHHHHHHH
T ss_pred HHHHHC-CCeE--CCCCceEEEEECCC-------CHHHH-HHHHHHCCEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHH
Confidence 999987 6663 35567889988864 14444 555668999998 776666899999998 78889999999
Q ss_pred HHHHHHH
Q 042445 235 MKAFYDR 241 (246)
Q Consensus 235 l~~~~~~ 241 (246)
|.+++++
T Consensus 345 l~~~l~~ 351 (354)
T 3ly1_A 345 MREFRKK 351 (354)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9998865
No 59
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=6.9e-35 Score=247.26 Aligned_cols=216 Identities=15% Similarity=0.179 Sum_probs=179.3
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC--cccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS--IVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++..+.++..+.. .++++++.|+||.|+++|+|+|
T Consensus 169 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 248 (392)
T 3b1d_A 169 LLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNS 248 (392)
Confidence 77899999999999999999999999999999999999999987655556655544 5689999999999999999999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHHhhhc--CCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCccc
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIFLNIS--SDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKE-IPCITCP 166 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~ 166 (246)
|+++++. ++++.+......+ .++|++.|.++..+|.. .+.++++.++.++++++.+.+.|++ +|++. +
T Consensus 249 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~ 319 (392)
T 3b1d_A 249 YAIIENP-------TLCAQFKHQQLVNNHHEVSSLGYIATETAYRY-GKPWLVALKAVLEENIQFAVEYFAQEAPRLK-V 319 (392)
Confidence 9999862 4788787664433 25799999999999884 3578899999999999999999988 77876 5
Q ss_pred cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHHHHHHHHH
Q 042445 167 KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLGRMKAFYD 240 (246)
Q Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~~l~~~~~ 240 (246)
..|.+++++|++++.... +..++...+++++||.+.||..|+. ++++|++++.+++++++++++|.++++
T Consensus 320 ~~~~~~~~~~i~~~~~~~----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 320 MKPQGTYLIWLDFSDYGL----TDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 788999999988864211 2445555544589999999998874 689999999888899999999998875
No 60
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=8e-32 Score=230.15 Aligned_cols=208 Identities=13% Similarity=0.077 Sum_probs=167.7
Q ss_pred cccCC-cCCCccCCChhhHHHHHHHHH------HcCCEEEEccccCCcccCCCCCcccc-ccC-Cccc--EEEEcccccc
Q 042445 12 FSDFQ-VFHVGSGFSGSFVSPIAETAK------KLGIMVIANEVYGHLAFGNTPFVSMG-VFG-SIVP--LLTLGSISKR 80 (246)
Q Consensus 12 ~~~~p-~NPtG~~~~~~~~~~l~~~~~------~~~~~ii~De~y~~~~~~~~~~~~~~-~~~-~~~~--~i~~~s~sK~ 80 (246)
++++| |||||.+++.+++++|+++|+ +||+++|+||+|.++.+++..+.++. ... ..++ +++++||||.
T Consensus 184 i~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 263 (418)
T 3rq1_A 184 IFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKG 263 (418)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTT
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCC
Confidence 78889 999999999999999999999 89999999999999887653222221 121 1234 6899999999
Q ss_pred cccCCceEEEEEe---eCCCCCcchhhHHHHHHHHhh-----hcCCCCchHHHHHHHHHhhch-----HHHHHHHHHHHH
Q 042445 81 GIVPGLRLGWLVT---SDPNGILQDSGIVDSIKIFLN-----ISSDPATFIQGAVPQILEKTE-----EEFFSKIIDILR 147 (246)
Q Consensus 81 ~~~~g~r~G~i~~---~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~ 147 (246)
|+++|+|+||+++ ++ ++++.+..... .+++++.++|.++..++++.. ...+++.++.++
T Consensus 264 ~~~~G~r~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 335 (418)
T 3rq1_A 264 FTMYGQRVGAMIGISDDE--------EIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIR 335 (418)
T ss_dssp TTCCSSCCEEEEEEESSH--------HHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcCCcceEEEEEeCCH--------HHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 66 88888876532 234689999999999998642 234556778899
Q ss_pred HHHHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-ChH
Q 042445 148 ETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-EPS 226 (246)
Q Consensus 148 ~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-~~~ 226 (246)
++++.+.+.|+++ |+. +..|.+|+|+|++++ +..++ .+.|.++||.+.||. +++|+|++. +++
T Consensus 336 ~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~-~~~l~~~gi~v~~g~-----~~iRis~~~~~~~ 399 (418)
T 3rq1_A 336 DRADIFKQEAAQV-GLP-MLPYRGGFFITIPTD--------SANAI-CEELKKEHIYVIALA-----NGIRIAACGIPKC 399 (418)
T ss_dssp HHHHHHHHHHHHH-TCC-CCCCCSSSEEEEECT--------THHHH-HHHHHHTTEECEECS-----SEEEEEGGGSCHH
T ss_pred HHHHHHHHHHHhc-CCC-CCCCCceEEEEcCCC--------CHHHH-HHHHHhCCEEEecCC-----CCeEEEEecCCHH
Confidence 9999999999887 676 568899999998764 24455 457789999999974 789999985 999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 042445 227 ALENGLGRMKAFYDRHA 243 (246)
Q Consensus 227 ~l~~~~~~l~~~~~~~~ 243 (246)
++++++++|.++++++.
T Consensus 400 ~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 400 QMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp HHTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 61
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.98 E-value=7.5e-31 Score=225.79 Aligned_cols=217 Identities=16% Similarity=0.250 Sum_probs=171.6
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.++|.+++++|+++|++||+++|+||+|+.+.... .+.... ....++++++.|+||. +++|+|+||+
T Consensus 211 ~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~ 287 (444)
T 3if2_A 211 CCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI-IYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGII 287 (444)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEE
T ss_pred EeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccc-cccccc-ccCCCCEEEEechhhc-cCCCCceEEE
Confidence 778999999999999999999999999999999999998543111 111111 1234689999999997 8999999999
Q ss_pred EeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhch-HHHHHH-HHHHHHHHHHHHHHHhhc-CCCCc-cc
Q 042445 92 VTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTE-EEFFSK-IIDILRETADKCCDRLKE-IPCIT-CP 166 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~-~~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~-~~ 166 (246)
++++ ++++.+..... .+++++++.|.++..++.... ..+..+ .++.++++++.+.+.|++ ++++. .+
T Consensus 288 ~~~~--------~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 359 (444)
T 3if2_A 288 VADA--------KVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMI 359 (444)
T ss_dssp ECCH--------HHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEE
T ss_pred EECH--------HHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceE
Confidence 9988 89998887643 455789999999999998654 344444 778889999999999876 66432 24
Q ss_pred cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC----------CCeEEEEeecChHHHHHHHHHHH
Q 042445 167 KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----------KDWLRITFAVEPSALENGLGRMK 236 (246)
Q Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----------~~~iRls~~~~~~~l~~~~~~l~ 236 (246)
..|.+|+++|++++.... +..++ ...|.++||.+.||..|.. ++++||+++.+++++++++++|.
T Consensus 360 ~~~~~g~~~~~~~~~~~~----~~~~l-~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~ 434 (444)
T 3if2_A 360 HKPEGAIFLWLWFKDLPI----STLDL-YERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIG 434 (444)
T ss_dssp ECCCBSSEEEEEETTCSS----CHHHH-HHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHH
T ss_pred ecCCccEEEEEEcCCCCC----CHHHH-HHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHH
Confidence 578899999999875211 34444 5567889999999998854 26899999999999999999999
Q ss_pred HHHHHHhh
Q 042445 237 AFYDRHAE 244 (246)
Q Consensus 237 ~~~~~~~~ 244 (246)
+++++..+
T Consensus 435 ~~~~~~~~ 442 (444)
T 3if2_A 435 EVVRELYD 442 (444)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99988764
No 62
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.98 E-value=7.9e-32 Score=226.14 Aligned_cols=214 Identities=14% Similarity=0.159 Sum_probs=174.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCccc--CC-CCCccccccCCcccEEEE
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAF--GN-TPFVSMGVFGSIVPLLTL 74 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~--~~-~~~~~~~~~~~~~~~i~~ 74 (246)
|.+++.++++ ++++||||||.+++.+++.+|+++| ++|+++|+||+|.++.+ .+ .........+..++++++
T Consensus 144 ~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 222 (365)
T 3get_A 144 KKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYL 222 (365)
T ss_dssp HHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEE
T ss_pred HHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEE
Confidence 4556666543 7789999999999999999999998 57999999999998885 33 223333333445689999
Q ss_pred cccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 75 GSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 75 ~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
+|+||.|+++|+|+||+++++ ++++.+......+ ++|++.|.++..+++. ..++++.++.++++++.+.
T Consensus 223 ~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~ 291 (365)
T 3get_A 223 GTFSKLYGLGGLRIGYGIANA--------NIISAFYKLRAPF-NVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYK 291 (365)
T ss_dssp EESSSTTSCTTTCCEEEEECH--------HHHHHHHHHSCTT-CSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHH
T ss_pred eecchHhcCcchheEEEEcCH--------HHHHHHHHhcCCC-CcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 9999888775544 7899999999999984 4789999999999999999
Q ss_pred HHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHH
Q 042445 155 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGR 234 (246)
Q Consensus 155 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~ 234 (246)
+.|+++ ++.. .+..|.|+|++++.. +..++ .+.|.++||.+.||..|+ ++++|++++ ++++++++++.
T Consensus 292 ~~l~~~-g~~~--~~~~~~~~~~~~~~~------~~~~~-~~~l~~~gi~v~~g~~~~-~~~iRis~~-~~~~i~~l~~~ 359 (365)
T 3get_A 292 EFAKKH-NIKI--IDSYTNFITYFFDEK------NSTDL-SEKLLKKGIIIRNLKSYG-LNAIRITIG-TSYENEKFFTE 359 (365)
T ss_dssp HHHHHT-TCEE--CCCSSSEEEEECSSS------CHHHH-HHHHHTTTEECEECGGGT-CSEEEEECC-CHHHHHHHHHH
T ss_pred HHHHhC-CCEE--CCCCCeEEEEECCCC------CHHHH-HHHHHHCCEEEEECccCC-CCEEEEEcC-CHHHHHHHHHH
Confidence 999988 6763 455677789888642 24444 555667899999999998 899999998 78889999999
Q ss_pred HHHHH
Q 042445 235 MKAFY 239 (246)
Q Consensus 235 l~~~~ 239 (246)
|++++
T Consensus 360 l~~~l 364 (365)
T 3get_A 360 FDKIL 364 (365)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88775
No 63
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.98 E-value=2.1e-31 Score=227.21 Aligned_cols=206 Identities=17% Similarity=0.144 Sum_probs=165.6
Q ss_pred cccCC-cCCCccCCChhhHHHHHHHHH------HcCCEEEEccccCCcccCCCCCccccc-cCC-ccc--EEEEcccccc
Q 042445 12 FSDFQ-VFHVGSGFSGSFVSPIAETAK------KLGIMVIANEVYGHLAFGNTPFVSMGV-FGS-IVP--LLTLGSISKR 80 (246)
Q Consensus 12 ~~~~p-~NPtG~~~~~~~~~~l~~~~~------~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~-~~~--~i~~~s~sK~ 80 (246)
++++| |||||.+++.+++++|+++|+ +||+++|+||+|.++.+++....++.. ... .++ +++++||||.
T Consensus 183 i~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 262 (413)
T 3t18_A 183 LINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKS 262 (413)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHH
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCcc
Confidence 78889 999999999999999999999 899999999999999988754444322 221 234 5899999999
Q ss_pred cccCCceEEEEEe---eCCCCCcchhhHHHHHHHHhh-----hcCCCCchHHHHHHHHHhhch----HHHHHHHHHHHHH
Q 042445 81 GIVPGLRLGWLVT---SDPNGILQDSGIVDSIKIFLN-----ISSDPATFIQGAVPQILEKTE----EEFFSKIIDILRE 148 (246)
Q Consensus 81 ~~~~g~r~G~i~~---~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~ 148 (246)
|+++|+|+||+++ ++ ++++.+..... .++.++.++|.++..++++.. ..++++.++.+++
T Consensus 263 ~~~~G~riG~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 334 (413)
T 3t18_A 263 HTAYGLRSGAAVGISSSK--------EIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKS 334 (413)
T ss_dssp TTCGGGCCEEEEEEESCH--------HHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCcCcEEEEEecCCH--------HHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 66 88888876532 234689999999999998642 3456778889999
Q ss_pred HHHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-ChHH
Q 042445 149 TADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-EPSA 227 (246)
Q Consensus 149 ~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-~~~~ 227 (246)
+++.+.+.|+++ |+. +..|++++|+|+++. +..++. +.|.++||.+.|| ++++|++++. ++++
T Consensus 335 ~~~~l~~~l~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~-~~l~~~gv~v~~g-----~~~iRis~~~~~~~~ 398 (413)
T 3t18_A 335 RADVFVTAAKEN-KLT-MIPYFGGFFTFIPTD--------KAFDIV-KDLEKENIFTIPS-----AKGIRVAICGVGEEK 398 (413)
T ss_dssp HHHHHHHHHHHT-TCC-CBCCCSSSCEEEECS--------CHHHHH-HHHHHTTEECEEC-----SSEEEECTTTSCGGG
T ss_pred HHHHHHHHHHHc-CCC-ccCCCceEEEEeCCC--------CHHHHH-HHHHhCCEEEecC-----CCceEEEEeeCCHHH
Confidence 999999999988 676 568899999997663 245554 5678999999997 4789999995 6666
Q ss_pred HHHHHHHHHHHHHHHhh
Q 042445 228 LENGLGRMKAFYDRHAE 244 (246)
Q Consensus 228 l~~~~~~l~~~~~~~~~ 244 (246)
+ +++|.+++++..+
T Consensus 399 ~---l~~l~~~l~~~~~ 412 (413)
T 3t18_A 399 I---PKLVQRLAFYTNK 412 (413)
T ss_dssp H---HHHHHHHHHHHHC
T ss_pred H---HHHHHHHHHHHhc
Confidence 6 8888888887654
No 64
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.97 E-value=5.1e-31 Score=221.37 Aligned_cols=211 Identities=15% Similarity=0.221 Sum_probs=175.1
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHc--CCEEEEccccCCcccCCCCCccccccCCcccEEEE
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKL--GIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTL 74 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~--~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~ 74 (246)
|.+++.+++ + ++++||||||.+++.+++++|+++|++| |+++|+||+|.++...+ . ...++..++++++
T Consensus 147 ~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~--~~~~~~~~~~i~~ 222 (367)
T 3euc_A 147 GAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--W--MSRLTDFGNLLVM 222 (367)
T ss_dssp HHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--S--GGGGGTCTTEEEE
T ss_pred HHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--h--HHHHhhCCCEEEE
Confidence 455565554 3 7789999999999999999999999999 99999999999877432 2 1233455688999
Q ss_pred cccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 75 GSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 75 ~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
.|+||. +++|+|+||+++++ ++++.+......+ ++|++.|.++..+++. ..++++.++.++++++.+.
T Consensus 223 ~s~sK~-~~~G~r~G~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~ 290 (367)
T 3euc_A 223 RTVSKL-GLAGIRLGYVAGDP--------QWLEQLDKVRPPY-NVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVA 290 (367)
T ss_dssp EECCCT-TSCSCCEEEEEECH--------HHHHHHGGGCCSS-CCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHH
T ss_pred ecchhh-cccccCceeeeeCH--------HHHHHHHHhCCCC-CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHH
Confidence 999999 99999999999987 8888887765443 7899999999999985 6788999999999999999
Q ss_pred HHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHH
Q 042445 155 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGL 232 (246)
Q Consensus 155 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~ 232 (246)
+.|+++|++.. .|.+|+|+|++++ . ..++ .+.|.++||.+.||..|+. ++++|++++ +++++++++
T Consensus 291 ~~l~~~~g~~~--~~~~~~~~~~~~~-~-------~~~l-~~~l~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~ 358 (367)
T 3euc_A 291 EGMAAHGGVTV--FPSAANFLLARVP-D-------AAQT-FDRLLARKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFL 358 (367)
T ss_dssp HHHHTSTTCEE--CCCSSSEEEEECS-C-------HHHH-HHHHHTTTEECEECGGGCGGGTTEEEEECC-CHHHHHHHH
T ss_pred HHHHhCCCcEE--CCCCCeEEEEECC-C-------HHHH-HHHHHHCCeEEEECCccCCCCCCEEEEecC-CHHHHHHHH
Confidence 99999888863 5677889998876 1 4444 4557889999999998764 799999998 888899999
Q ss_pred HHHHHHHH
Q 042445 233 GRMKAFYD 240 (246)
Q Consensus 233 ~~l~~~~~ 240 (246)
+.|.++++
T Consensus 359 ~~l~~~l~ 366 (367)
T 3euc_A 359 EAFAASLQ 366 (367)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhc
Confidence 99988753
No 65
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.97 E-value=9.2e-32 Score=229.23 Aligned_cols=202 Identities=14% Similarity=0.125 Sum_probs=161.8
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCC--CCcccccc-CCcccEEEEcccccccccCCceE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNT--PFVSMGVF-GSIVPLLTLGSISKRGIVPGLRL 88 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~~~g~r~ 88 (246)
++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+ +..+++++++||||.|+++|+|+
T Consensus 188 ~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ri 267 (409)
T 4eu1_A 188 VHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRC 267 (409)
T ss_dssp EESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCC
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCc
Confidence 5689999999999999999999999999999999999999998752 12233222 44568899999999999999999
Q ss_pred EEE--EeeCCCCCcchhh----HHHHHHHHh-hhcCCCCchHHHHHHHHHhhch-----HHHHHHHHHHHHHHHHHHHHH
Q 042445 89 GWL--VTSDPNGILQDSG----IVDSIKIFL-NISSDPATFIQGAVPQILEKTE-----EEFFSKIIDILRETADKCCDR 156 (246)
Q Consensus 89 G~i--~~~~~~~~~~~~~----~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~ 156 (246)
||+ ++++. + +++.+.... ..+.+++++.|.++..++.+.. ..++++.++.++++++.+.+.
T Consensus 268 G~~~~v~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 340 (409)
T 4eu1_A 268 GALHISTASA-------EEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSE 340 (409)
T ss_dssp EEEEEECSSH-------HHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCH-------HHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 997 55552 5 666666543 3455788999999999998643 456888999999999999999
Q ss_pred hhcCC--C-CccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-ChHHHHHHH
Q 042445 157 LKEIP--C-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-EPSALENGL 232 (246)
Q Consensus 157 L~~~~--~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-~~~~l~~~~ 232 (246)
|++++ + +. +..|++|+|+|+.+ +.+++..+++++||.+.||. |++++. +++++++++
T Consensus 341 L~~~g~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~ll~~~gv~v~p~~--------Ri~~~~~~~~~i~~~~ 401 (409)
T 4eu1_A 341 LKACGSVHDWS-HIERQVGMMAYTGL----------TREQVELLRSEYHIYMTLNG--------RAAVSGLNSTNVEYVS 401 (409)
T ss_dssp HHHTTCCSCCH-HHHHSCSSEEECCC----------CHHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHH
T ss_pred HHhcCCCCCcc-eecCCceEEEEeCC----------CHHHHHHHHHcCCEEEcCCC--------EEEEEecCHhhHHHHH
Confidence 98863 2 44 45788999999544 23557778888999999864 999985 777799999
Q ss_pred HHHHHHH
Q 042445 233 GRMKAFY 239 (246)
Q Consensus 233 ~~l~~~~ 239 (246)
++|.+++
T Consensus 402 ~~l~~~l 408 (409)
T 4eu1_A 402 QAIHNVT 408 (409)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998765
No 66
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.97 E-value=2.1e-31 Score=226.95 Aligned_cols=209 Identities=14% Similarity=0.001 Sum_probs=159.9
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCcc--c-cccCCcccEEEEcccccccccCCceE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVS--M-GVFGSIVPLLTLGSISKRGIVPGLRL 88 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~--~-~~~~~~~~~i~~~s~sK~~~~~g~r~ 88 (246)
+.++||||||.+++.+++++|+++|+++++++|+||+|.+|.+++....+ + ...+..++++++.||||.|+++|+|+
T Consensus 195 l~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~Rv 274 (420)
T 4h51_A 195 LHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERA 274 (420)
T ss_dssp EESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCE
T ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCce
Confidence 77899999999999999999999999999999999999999987532212 1 11234457999999999999999999
Q ss_pred EEEEeeCCCCCcchhhHHHH----HHHH-hhhcCCCCchHHHHHHHHHhhch-----HHHHHHHHHHHHHHHHHHHHHhh
Q 042445 89 GWLVTSDPNGILQDSGIVDS----IKIF-LNISSDPATFIQGAVPQILEKTE-----EEFFSKIIDILRETADKCCDRLK 158 (246)
Q Consensus 89 G~i~~~~~~~~~~~~~~~~~----l~~~-~~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~ 158 (246)
||++++.. .. +...+ +... ...+++++..+|.++..++.+.. ..+++..+++++++|+.+.+.|+
T Consensus 275 G~~~~~~~--~~---~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~ 349 (420)
T 4h51_A 275 GTLSLLLK--DK---TKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELL 349 (420)
T ss_dssp EEEEEECS--CH---HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccc--CH---HHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998872 10 11222 2222 23455788899999999998653 45678889999999999999998
Q ss_pred cCC--CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-ChHHHHHHHHHH
Q 042445 159 EIP--CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-EPSALENGLGRM 235 (246)
Q Consensus 159 ~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-~~~~l~~~~~~l 235 (246)
+++ +.+.+..+++|||.|+.+ +.+++ ++|+++||++.|+. |||++. ++++++.++++|
T Consensus 350 ~~g~~~~~~~i~~q~GmF~~~gl----------s~e~v-~~L~e~~Vy~~~~g--------Ris~Agl~~~ni~~~a~aI 410 (420)
T 4h51_A 350 RLQTPGSWEHVINQIGMFSFLGL----------SKAQC-EYCQNHNIFITVSG--------RANMAGLTHETALMLAQTI 410 (420)
T ss_dssp HTTCSSCCTHHHHCCSSEEECCC----------CHHHH-HHHHHTTEECCTTC--------EEEGGGCCHHHHHHHHHHH
T ss_pred HhCCCCCCCeecCCCceEEecCc----------CHHHH-HHHHhCCEEEcCCC--------EEEeccCCHHHHHHHHHHH
Confidence 852 222245678899999644 23444 46789999999865 999985 999999999999
Q ss_pred HHHHHHHhh
Q 042445 236 KAFYDRHAE 244 (246)
Q Consensus 236 ~~~~~~~~~ 244 (246)
.+++++..+
T Consensus 411 ~~vvr~i~r 419 (420)
T 4h51_A 411 NDAVRNVNR 419 (420)
T ss_dssp HHHHC----
T ss_pred HHHHHHhhc
Confidence 999987665
No 67
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.97 E-value=2.9e-31 Score=227.00 Aligned_cols=212 Identities=16% Similarity=0.156 Sum_probs=167.6
Q ss_pred hhhhhhhc---cc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCC-CCcccccc-CCcccEE
Q 042445 2 ELINQDIT---RE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNT-PFVSMGVF-GSIVPLL 72 (246)
Q Consensus 2 e~~~~~~~---~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-~~~~~~i 72 (246)
|.+++.++ ++ ++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+ +..++++
T Consensus 183 ~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 262 (420)
T 4f4e_A 183 DGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVF 262 (420)
T ss_dssp HHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEE
Confidence 34555554 32 7889999999999999999999999999999999999999998742 23343333 3456899
Q ss_pred EEcccccccccCCceEEEEEe--eCCCCCcchhhHHHH----HHHHh-hhcCCCCchHHHHHHHHHhhch-----HHHHH
Q 042445 73 TLGSISKRGIVPGLRLGWLVT--SDPNGILQDSGIVDS----IKIFL-NISSDPATFIQGAVPQILEKTE-----EEFFS 140 (246)
Q Consensus 73 ~~~s~sK~~~~~g~r~G~i~~--~~~~~~~~~~~~~~~----l~~~~-~~~~~~~~~~q~~~~~~l~~~~-----~~~~~ 140 (246)
+++||||.|+++|+|+||+++ ++. ++++. ++... ..+++++.+.|.++..++.... +.+++
T Consensus 263 ~~~S~SK~~~~~G~RiG~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 335 (420)
T 4f4e_A 263 VSSSFSKSFSLYGERVGALSIITDSK-------DEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELG 335 (420)
T ss_dssp EEEECTTTTTCGGGCEEEEEEECSSH-------HHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EEEeCCccCcCcCCCcEEEEEEcCCH-------HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999999999875 221 44443 33322 2344678999999999888643 56789
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeE
Q 042445 141 KIIDILRETADKCCDRLKEI---PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWL 217 (246)
Q Consensus 141 ~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~i 217 (246)
+.++.++++++.+.+.|+++ +++. +..|++|+|+|+.++ .+.+..++.++||.+.|+.
T Consensus 336 ~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~----------~~~~~~~l~~~gI~v~~~~-------- 396 (420)
T 4f4e_A 336 EMRDRIRAMRNGLVERLKAAGIERDFS-FINAQRGMFSYSGLT----------SAQVDRLREEFGIYAVSTG-------- 396 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHSCSSEEECCCC----------HHHHHHHHHHHCEECCTTS--------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCce-eECCCccEEEEeCCC----------HHHHHHHHHhCCEEecCCC--------
Confidence 99999999999999999986 3566 467889999996553 3556778889999999864
Q ss_pred EEEeec-ChHHHHHHHHHHHHHH
Q 042445 218 RITFAV-EPSALENGLGRMKAFY 239 (246)
Q Consensus 218 Rls~~~-~~~~l~~~~~~l~~~~ 239 (246)
|+|++. +++++++++++|.+++
T Consensus 397 Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 397 RICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred eEEEecCCHHHHHHHHHHHHHHh
Confidence 999996 8888999999998876
No 68
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.97 E-value=1.5e-31 Score=226.83 Aligned_cols=200 Identities=16% Similarity=0.136 Sum_probs=156.5
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcC--CEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLG--IMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~--~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++||||||.+++ +|++ ++++ ++||+||+|.+ + .+.++.. ..+++++++||||.|+++|+|+|
T Consensus 162 ~l~~p~NPtG~~~~-----~l~~--~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG 227 (391)
T 3bwn_A 162 LVTSPNNPDGTIRE-----TVVN--RPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIG 227 (391)
T ss_dssp EEESSCTTTCCCCC-----CCC-------CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEE
T ss_pred EECCCCCCCchhHH-----HHHH--HhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceE
Confidence 68999999999997 3444 2255 99999999984 1 2223332 34689999999999999999999
Q ss_pred EEEe-eCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhch---------HHHHHHHHHHHHHHHHHHHHHhh
Q 042445 90 WLVT-SDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTE---------EEFFSKIIDILRETADKCCDRLK 158 (246)
Q Consensus 90 ~i~~-~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~L~ 158 (246)
|+++ ++ ++++.+..... ...+++.+.|.++..+|+.+. +.++++.++.++++++.+.+.|+
T Consensus 228 ~~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 299 (391)
T 3bwn_A 228 WALVKDK--------EVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVK 299 (391)
T ss_dssp EEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCH--------HHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 66 88888887754 345889999999999998653 46899999999999999999999
Q ss_pred cCCCCccccC-------------CCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC-CCeEEEEeecC
Q 042445 159 EIPCITCPKK-------------PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-KDWLRITFAVE 224 (246)
Q Consensus 159 ~~~~~~~~~~-------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~iRls~~~~ 224 (246)
+++++. +.. |.+|+|+|++++.. +.+..++.++||.+.||..|+. ++++|+|++.+
T Consensus 300 ~~~~~~-~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~---------~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~ 369 (391)
T 3bwn_A 300 ESDAFT-LPKYPEAFCNYFGKSLESYPAFAWLGTKEE---------TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSR 369 (391)
T ss_dssp TCSSEE-CCCCCCEEETTTTEEECCCCSEEEEEESSS---------CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSC
T ss_pred hCCCcc-cccCCccccccccccCCCcceEEEecCCcH---------HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCC
Confidence 886655 222 35667999988631 3456678899999999999986 78999999988
Q ss_pred hHHHHHHHHHHHHHHHHHh
Q 042445 225 PSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 225 ~~~l~~~~~~l~~~~~~~~ 243 (246)
++++++++++|.+++++..
T Consensus 370 ~e~i~~~~~~L~~~~~~~~ 388 (391)
T 3bwn_A 370 EDVFNVFLERLANMKLIKS 388 (391)
T ss_dssp HHHHHHHHHHHHSCC----
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 8999999999998876543
No 69
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.97 E-value=5.9e-31 Score=224.31 Aligned_cols=204 Identities=17% Similarity=0.140 Sum_probs=165.3
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCC--CCCccccccC-CcccEEEEcccccccccCCceE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGN--TPFVSMGVFG-SIVPLLTLGSISKRGIVPGLRL 88 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~-~~~~~i~~~s~sK~~~~~g~r~ 88 (246)
++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++ ..+.++..+. ..++++++.|+||.|+++|+|+
T Consensus 188 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ri 267 (412)
T 1ajs_A 188 LHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERV 267 (412)
T ss_dssp EESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCE
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcce
Confidence 579999999999999999999999999999999999999998764 1222333332 3468999999999999999999
Q ss_pred EEEEe---eCCCCCcchhh----HHHHHHHHh-hhcCCCCchHHHHHHHHHhhch-----HHHHHHHHHHHHHHHHHHHH
Q 042445 89 GWLVT---SDPNGILQDSG----IVDSIKIFL-NISSDPATFIQGAVPQILEKTE-----EEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 89 G~i~~---~~~~~~~~~~~----~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~ 155 (246)
||+++ ++ + +++.+.... ..+.+++++.|.++..+|+... +.++++.++.++++++.+.+
T Consensus 268 G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 339 (412)
T 1ajs_A 268 GNLTVVAKEP--------DSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRA 339 (412)
T ss_dssp EEEEEECSSH--------HHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCH--------HHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 55 5 445455432 3343579999999999998653 45889999999999999999
Q ss_pred HhhcCC---CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-ChHHHHHH
Q 042445 156 RLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-EPSALENG 231 (246)
Q Consensus 156 ~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-~~~~l~~~ 231 (246)
.|++++ ++. +..|.+|+|+|+.++ .+++..++.++||.+.|+ +|++++. ++++++++
T Consensus 340 ~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~~~i~~~ 400 (412)
T 1ajs_A 340 RLEALKTPGTWN-HITDQIGMFSFTGLN----------PKQVEYLINQKHIYLLPS--------GRINMCGLTTKNLDYV 400 (412)
T ss_dssp HHHHTTCSSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHTTCEECCTT--------SEEEGGGCCTTTHHHH
T ss_pred HHHhhCCCCCee-EEcCCCceEEEeCCC----------HHHHHHHHHhCCEEecCC--------cEEEeeeCCHHHHHHH
Confidence 999874 355 457889999996542 456777888999999885 4999995 89999999
Q ss_pred HHHHHHHHHHH
Q 042445 232 LGRMKAFYDRH 242 (246)
Q Consensus 232 ~~~l~~~~~~~ 242 (246)
+++|.+++++.
T Consensus 401 ~~~l~~~l~~~ 411 (412)
T 1ajs_A 401 ATSIHEAVTKI 411 (412)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999998753
No 70
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.97 E-value=6.9e-31 Score=222.70 Aligned_cols=203 Identities=14% Similarity=0.093 Sum_probs=161.8
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCC-CCCcccccc-CCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGN-TPFVSMGVF-GSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ ....++..+ +..+++++++|+||.|+++|+|+|
T Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG 257 (397)
T 3fsl_A 178 LHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVG 257 (397)
T ss_dssp ECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCE
T ss_pred EeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCee
Confidence 788999999999999999999999999999999999999999873 223343333 345789999999999999999999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH-----hhhcCCCCchHHHHHHHHHhhch-----HHHHHHHHHHHHHHHHHHHHHhhc
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF-----LNISSDPATFIQGAVPQILEKTE-----EEFFSKIIDILRETADKCCDRLKE 159 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~ 159 (246)
|++++... +++++.+... ...+.+++.+.|.++..++.... ..++++.++.++++++.+.+.|++
T Consensus 258 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 332 (397)
T 3fsl_A 258 GLSVMCED-----AEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLST 332 (397)
T ss_dssp EEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCC-----HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99863210 0445444322 12344678899999999888643 567889999999999999999998
Q ss_pred CC---CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-ChHHHHHHHHHH
Q 042445 160 IP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-EPSALENGLGRM 235 (246)
Q Consensus 160 ~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-~~~~l~~~~~~l 235 (246)
++ ++. +..|++|+|+|+.++ .+.+..+++++||.+.||. |++++. +++++++++++|
T Consensus 333 ~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~l 393 (397)
T 3fsl_A 333 EMPERNFD-YLLNQRGMFSYTGLS----------AAQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAF 393 (397)
T ss_dssp HCTTSCCT-HHHHCCSSEEECCCC----------HHHHHHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHHH
T ss_pred cCCCCCce-eecCCceEEEecCCC----------HHHHHHHHHhCCEEECCCC--------eEEEEecCHhhHHHHHHHH
Confidence 64 566 467789999997653 3456778889999999975 999997 888899999999
Q ss_pred HHH
Q 042445 236 KAF 238 (246)
Q Consensus 236 ~~~ 238 (246)
.++
T Consensus 394 ~~~ 396 (397)
T 3fsl_A 394 AAV 396 (397)
T ss_dssp HHH
T ss_pred Hhh
Confidence 875
No 71
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.97 E-value=1.2e-30 Score=221.62 Aligned_cols=204 Identities=17% Similarity=0.115 Sum_probs=159.3
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCC--CCcccccc-CCcccEEEEcccccccccCCceE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNT--PFVSMGVF-GSIVPLLTLGSISKRGIVPGLRL 88 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~~~g~r~ 88 (246)
++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+ ...+++++++||||.|+++|+|+
T Consensus 180 ~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~Ri 259 (401)
T 7aat_A 180 LHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERA 259 (401)
T ss_dssp EESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCE
T ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCce
Confidence 8899999999999999999999999999999999999999988753 12233222 34568999999999999999999
Q ss_pred EEEEeeCCCCCcchhh----HHHHHHHHh-hhcCCCCchHHHHHHHHHhhch-----HHHHHHHHHHHHHHHHHHHHHhh
Q 042445 89 GWLVTSDPNGILQDSG----IVDSIKIFL-NISSDPATFIQGAVPQILEKTE-----EEFFSKIIDILRETADKCCDRLK 158 (246)
Q Consensus 89 G~i~~~~~~~~~~~~~----~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~ 158 (246)
||++++... ++ +...+.... ..+.+++.+.|.++..++.++. ..++++.++.++++++.+.+.|+
T Consensus 260 G~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 334 (401)
T 7aat_A 260 GAFTVICRD-----AEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLK 334 (401)
T ss_dssp EEEEEECSS-----HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCC-----HHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999873210 03 445554442 2344677788888888887542 46688889999999999999998
Q ss_pred cCC---CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-ChHHHHHHHHH
Q 042445 159 EIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-EPSALENGLGR 234 (246)
Q Consensus 159 ~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-~~~~l~~~~~~ 234 (246)
+++ ++. +..|++|+|+|+.++ .+++..+++++||.+.|+ +|+|++. ++++++++++.
T Consensus 335 ~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~ 395 (401)
T 7aat_A 335 KEGSSHNWQ-HITDQIGMFCFTGLK----------PEQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHA 395 (401)
T ss_dssp HTTCCSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHH
T ss_pred hcCCCCCCc-eecCCcceEEecCCC----------HHHHHHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHH
Confidence 862 354 457899999996542 455677888999999875 4999985 66669999999
Q ss_pred HHHHH
Q 042445 235 MKAFY 239 (246)
Q Consensus 235 l~~~~ 239 (246)
|.+++
T Consensus 396 l~~~~ 400 (401)
T 7aat_A 396 IHQVT 400 (401)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98875
No 72
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.97 E-value=1.3e-30 Score=224.73 Aligned_cols=210 Identities=16% Similarity=0.116 Sum_probs=164.9
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCC--CCcccccc-CCcccEEEEcccccccccCCceE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNT--PFVSMGVF-GSIVPLLTLGSISKRGIVPGLRL 88 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~~~g~r~ 88 (246)
++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ ...++++++.||||.|+++|+|+
T Consensus 207 ~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~Ri 286 (448)
T 3meb_A 207 FHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERI 286 (448)
T ss_dssp EESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCC
T ss_pred EeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccc
Confidence 7789999999999999999999999999999999999999988751 12233322 33468899999999999999999
Q ss_pred EEE--Ee--------eCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhch-----HHHHHHHHHHHHHHHHH
Q 042445 89 GWL--VT--------SDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTE-----EEFFSKIIDILRETADK 152 (246)
Q Consensus 89 G~i--~~--------~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~ 152 (246)
||+ ++ ++. .... ++++.+... ...+++++.+.|.++..+|.+.. ..++++.++.++++++.
T Consensus 287 G~l~~v~~~~~~~~~~~~-~~~~--~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~ 363 (448)
T 3meb_A 287 GCLHVVHAGVEGSVEKNK-ALSA--AMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSL 363 (448)
T ss_dssp EEEEEECCCCSSSHHHHH-HHHH--HHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeeeccccccccCCH-HHHH--HHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 66 431 0000 244444443 33455788899999999998643 25588899999999999
Q ss_pred HHHHhhcC--CC------CccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-
Q 042445 153 CCDRLKEI--PC------ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV- 223 (246)
Q Consensus 153 l~~~L~~~--~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~- 223 (246)
+.+.|+++ ++ +. +..|++|+|+|+.+ +.+++..+++++||.+.||+. |+|++.
T Consensus 364 l~~~L~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~----------~~~~~~~ll~~~gV~v~~G~g-------Ris~a~~ 425 (448)
T 3meb_A 364 LHASLAKRKTPGPGSKGTWD-HILTAIGMFTFTGL----------TPEHVDYLKEKWSIYLVKAGG-------RMSMCGL 425 (448)
T ss_dssp HHHHHHHTTCCCSTTTCCCT-HHHHCCSSEEECCC----------CHHHHHHHHHHHCEEECSGGG-------EEEGGGC
T ss_pred HHHHHHhhCCCCcCcccccc-eeCCCceEEEecCC----------CHHHHHHHHHhCCEEEeCCCc-------EEEEecC
Confidence 99999886 45 44 45788999999655 346677788899999999762 999997
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q 042445 224 EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 224 ~~~~l~~~~~~l~~~~~~~ 242 (246)
+++++++++++|.+++++.
T Consensus 426 ~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 426 TESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp CTTTHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 8888999999999998753
No 73
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.97 E-value=3.4e-30 Score=215.13 Aligned_cols=206 Identities=14% Similarity=0.186 Sum_probs=162.2
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.+++.+++.+|++.|.++ ++|+||+|.++.+++... ...++..++++++.||||.++++|+|+||+
T Consensus 134 ~i~~p~nptG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~ 209 (350)
T 3fkd_A 134 WLCNPNNPDGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYI 209 (350)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEE
T ss_pred EEeCCCCCcCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeE
Confidence 7789999999999999999988888765 999999999988775322 234455678999999999999999999999
Q ss_pred EeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCC
Q 042445 92 VTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEG 171 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 171 (246)
++++ ++++.+......+ ++|++.|.++..+|+.. +.+.++.++.. ++++.+.+.|++++++.. .|.+
T Consensus 210 ~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~--~~~~ 276 (350)
T 3fkd_A 210 VANK--------DFMKRVAAFSTPW-AVNALAIEAAKFILIHP-AQFTLPIRKWQ-RNTVDFITALNRLDGVEV--HPSG 276 (350)
T ss_dssp ECCH--------HHHHHHHTTCCTT-CSCHHHHHHHHHHHHCT-TTTCCCHHHHH-HHHHHHHHHHHHSTTEEE--CCCS
T ss_pred EeCH--------HHHHHHHHhCCCC-CCCHHHHHHHHHHHhCH-HHHHHHHHHHH-HHHHHHHHHHhcCCCcEE--CCCC
Confidence 9977 8999888775544 78999999999999853 23444555544 888999999988888874 5667
Q ss_pred ceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEeecChHHHHHHHHHHHHHHHH
Q 042445 172 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~~~~~~l~~~~~~l~~~~~~ 241 (246)
++|+|++++.. +..++...+++++||.+.||..|+. ++++|+|++ ++++++++++.|++.+++
T Consensus 277 ~~~~~~~~~~~------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 277 TTFFLLRLKKG------TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp SSEEEEEESSS------CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEECCCC------CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHH
Confidence 78888888753 2556655555449999999999876 789999998 555566667777666554
No 74
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.97 E-value=1.7e-30 Score=221.53 Aligned_cols=203 Identities=13% Similarity=0.147 Sum_probs=163.4
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCC--CCCccccccC-Ccc---cEEEEcccccccccCC
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGN--TPFVSMGVFG-SIV---PLLTLGSISKRGIVPG 85 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~-~~~---~~i~~~s~sK~~~~~g 85 (246)
++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ ..+.++..+. ..+ ++++++|+||.|+++|
T Consensus 181 ~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 260 (412)
T 1yaa_A 181 LHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYG 260 (412)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGG
T ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcC
Confidence 449999999999999999999999999999999999999998764 1222332222 223 7899999999999889
Q ss_pred ceEEEEE--e-----eCCCCCcchhh----HHHHHHHH-hhhcCCCCchHHHHHHHHHhhch-----HHHHHHHHHHHHH
Q 042445 86 LRLGWLV--T-----SDPNGILQDSG----IVDSIKIF-LNISSDPATFIQGAVPQILEKTE-----EEFFSKIIDILRE 148 (246)
Q Consensus 86 ~r~G~i~--~-----~~~~~~~~~~~----~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~ 148 (246)
+|+||++ + ++ + +++.+... ...+.+++++.|.++.++|+... +.++++.++.+++
T Consensus 261 lriG~~~~~~~~~~~~~--------~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 332 (412)
T 1yaa_A 261 ERVGCFHLALTKQAQNK--------TIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITK 332 (412)
T ss_dssp GCEEEEEEECCSCTTHH--------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEecCCCCCH--------HHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 7 44 5 77777764 33444668999999999998652 4689999999999
Q ss_pred HHHHHHHHhhcCC---CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-C
Q 042445 149 TADKCCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-E 224 (246)
Q Consensus 149 ~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-~ 224 (246)
+++.+.+.|++++ ++. +..|.+|+|+|+.++ . +.+..++.++||.+.| ++|++++. +
T Consensus 333 ~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~v~~--------~~Ris~~~~~ 393 (412)
T 1yaa_A 333 MRHALRDHLVKLGTPGNWD-HIVNQCGMFSFTGLT---------P-QMVKRLEETHAVYLVA--------SGRASIAGLN 393 (412)
T ss_dssp HHHHHHHHHHHHTCSSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCT--------TSEEEGGGCC
T ss_pred HHHHHHHHHHhhCCCCCee-eeccCceEEEeeCCC---------H-HHHHHHHHhCCEEecc--------CcEEEEccCC
Confidence 9999999998864 366 457889999996442 3 3457778889999987 46999996 8
Q ss_pred hHHHHHHHHHHHHHHHH
Q 042445 225 PSALENGLGRMKAFYDR 241 (246)
Q Consensus 225 ~~~l~~~~~~l~~~~~~ 241 (246)
++++++++++|.++++.
T Consensus 394 ~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 394 QGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp TTTHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHh
Confidence 89999999999998864
No 75
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.97 E-value=3.6e-29 Score=209.73 Aligned_cols=201 Identities=17% Similarity=0.215 Sum_probs=161.5
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.+++.+ ++.++|+++|+++|+||+|.++. +... ....+..++++++.|+||.|+++|+|+||+
T Consensus 154 ~i~~p~nptG~~~~~~---~l~~l~~~~~~~li~De~~~~~~--~~~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 226 (360)
T 3hdo_A 154 FLTTPNAPLGPSFPLE---YIDELARRCAGMLVLDETYAEFA--ESNA--LELVRRHENVVVTRTLSKSYSLAGMRIGLA 226 (360)
T ss_dssp EEESSCTTTCCCCCHH---HHHHHHHHBSSEEEEECTTGGGS--SCCC--THHHHHCSSEEEEEESTTTTSCTTSCCEEE
T ss_pred EEeCCCCCCCCCcCHH---HHHHHHHHCCCEEEEECChHhhC--Ccch--hHHhccCCCEEEEecchHhhcCCccceeeE
Confidence 8889999999999965 45666788999999999999864 2222 222334568899999999999999999999
Q ss_pred EeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCC
Q 042445 92 VTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEG 171 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 171 (246)
++++ ++++.+......+ ++|++.|.++..+|+. ..++++.++.++++++.+.+.|+++ ++.. .+.+
T Consensus 227 ~~~~--------~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~--~~~~ 292 (360)
T 3hdo_A 227 IARP--------EVIAALDKIRDHY-NLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSI-GYDV--IPSQ 292 (360)
T ss_dssp ECCH--------HHHHHHHHHSCSC-CSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCEE--CCCS
T ss_pred eeCH--------HHHHHHHHhCCCC-CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCEE--cCCC
Confidence 9987 9999888775543 7899999999999984 6688999999999999999999988 6763 4566
Q ss_pred ceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHHHHHHHH
Q 042445 172 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l~~~~~~ 241 (246)
|.|+|++++.. +.+.+.+.|.++||.+.|+..+..++++|++++ ++++++++++.|+++.+.
T Consensus 293 ~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 293 GNYLFATPPDR-------DGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp SSEEEEECTTC-------CHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC-
T ss_pred ccEEEEECCCC-------CHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhcc
Confidence 78888776532 344445667789999999877555899999998 777888888888877654
No 76
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.96 E-value=5.3e-30 Score=217.15 Aligned_cols=205 Identities=17% Similarity=0.145 Sum_probs=159.0
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCC-CCCccccccCC-cccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGN-TPFVSMGVFGS-IVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++ ..+.++..+.. .+++++++|+||.|+++|+|+|
T Consensus 177 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG 256 (396)
T 2q7w_A 177 FHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVG 256 (396)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCE
T ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccc
Confidence 679999999999999999999999999999999999999998763 12223333332 3589999999999999999999
Q ss_pred EEEe--eCCCCCcchhhHHHHHHHHh-hhcCCCCchHHHHHHHHHhhch-----HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 042445 90 WLVT--SDPNGILQDSGIVDSIKIFL-NISSDPATFIQGAVPQILEKTE-----EEFFSKIIDILRETADKCCDRLKEIP 161 (246)
Q Consensus 90 ~i~~--~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~ 161 (246)
|+++ ++. .... ++++.+.... ..+.++|++.|.++.++|+... +.++++.++.++++++.+.+.|++++
T Consensus 257 ~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 333 (396)
T 2q7w_A 257 ACTLVAADS-ETVD--RAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG 333 (396)
T ss_dssp EEEEECSSH-HHHH--HHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTT
T ss_pred eEEEEcCCH-HHHH--HHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9997 331 0000 2444444432 3343569999999999998641 46788899999999999999999874
Q ss_pred ---CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-ChHHHHHHHHHHHH
Q 042445 162 ---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-EPSALENGLGRMKA 237 (246)
Q Consensus 162 ---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-~~~~l~~~~~~l~~ 237 (246)
++. +..|.+|+|+|+.++ .+.+..++.++||.+.|| +|++++. +++++++++++|.+
T Consensus 334 ~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~ 394 (396)
T 2q7w_A 334 ANRDFS-FIIKQNGMFSFSGLT----------KEQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVA 394 (396)
T ss_dssp CCSCCT-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHH
T ss_pred CCCCcc-eecCCCceEEEecCC----------HHHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHh
Confidence 365 457889999996543 245677888999999885 4999996 88999999999987
Q ss_pred H
Q 042445 238 F 238 (246)
Q Consensus 238 ~ 238 (246)
+
T Consensus 395 ~ 395 (396)
T 2q7w_A 395 V 395 (396)
T ss_dssp H
T ss_pred c
Confidence 5
No 77
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.96 E-value=1.7e-29 Score=216.50 Aligned_cols=209 Identities=13% Similarity=0.126 Sum_probs=162.4
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++||||||.+++ +.+ + ++..+.|+.|. + ++.++..+. .+++++++||
T Consensus 187 ~~l~~~~~~~~k~v~l~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~----~--~~~s~~~~~-~~~~i~~~S~ 249 (427)
T 2hox_A 187 ANYVNVSNPEQYIEMVTSPNNPEGLLRH-AVI-------K--GCKSIYDMVYY----W--PHYTPIKYK-ADEDILLFTM 249 (427)
T ss_dssp GGGTTCSCGGGEEEEEESSCTTTCCCCC-CSS-------T--TCEEEEECTTC----S--TTTSCCCSC-BCCSEEEEEH
T ss_pred HHHHHhhcCCceEEEEcCCCCCcccccH-HHH-------c--CCCEEEeeccc----C--CCCCccccC-CCceEEEEeC
Confidence 4455555433 88899999999999 532 2 55566676664 2 222333333 5689999999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhh-cCCCCchHHHHHHHHHhhch----------HHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNI-SSDPATFIQGAVPQILEKTE----------EEFFSKIIDIL 146 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~~~~----------~~~~~~~~~~~ 146 (246)
||.|+++|+|+||+++++. ++++.+...... ..+++.+.|.++..+|.+.. +.++++.++.+
T Consensus 250 SK~~g~~G~RiG~~~~~~~-------~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~ 322 (427)
T 2hox_A 250 SKFTGHSGSRFGWALIKDE-------SVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKL 322 (427)
T ss_dssp HHHTSCGGGCCEEEEECCH-------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHH
T ss_pred hhcCCCCCceEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHH
Confidence 9999999999999999532 888988887553 34889999999999998642 35778889999
Q ss_pred HHHHHHHHHHhhcCCCCcc-------------ccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC
Q 042445 147 RETADKCCDRLKEIPCITC-------------PKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL 213 (246)
Q Consensus 147 ~~~~~~l~~~L~~~~~~~~-------------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~ 213 (246)
+++++.+.+.|++++++.. +..|++|+|+|++++.. +.+++..+++++||.++||..|+.
T Consensus 323 ~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~-------~~~~~~~ll~~~gI~v~pg~~f~~ 395 (427)
T 2hox_A 323 RERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE-------EDKDCYQTFQNGRINTQNGVGFEA 395 (427)
T ss_dssp HHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSG-------GGCSHHHHHHHTTEECEEGGGGTS
T ss_pred HHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCc-------HHHHHHHHHHHCCEEEcCCCccCC
Confidence 9999999999998766542 23567899999998642 445667777789999999999986
Q ss_pred -CCeEEEEeecChHHHHHHHHHHHHHHHH
Q 042445 214 -KDWLRITFAVEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 214 -~~~iRls~~~~~~~l~~~~~~l~~~~~~ 241 (246)
++++|+|++.+++++++++++|.+++++
T Consensus 396 ~~~~~Ris~~~~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 396 SSRYVRLSLIKTQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp CTTEEEEECSSCHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 7899999999899999999999998854
No 78
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=2.2e-28 Score=202.89 Aligned_cols=195 Identities=17% Similarity=0.183 Sum_probs=149.6
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.+++.+++.+ +|++++. +|+||+|.++...+.. . ....+++++++|+||.|+++|+|+||+
T Consensus 140 ~i~~p~nptG~~~~~~~l~~---l~~~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~ 210 (337)
T 3p1t_A 140 VLANPSNPTGQALSAGELDQ---LRQRAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGAL 210 (337)
T ss_dssp EEESSCTTTCCCCCHHHHHH---HHHHCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEE
T ss_pred EEeCCCCCCCCCCCHHHHHH---HHHhCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEE
Confidence 88999999999999766555 5567786 5669999987654321 1 223457899999999999999999999
Q ss_pred EeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCC
Q 042445 92 VTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEG 171 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 171 (246)
++++ ++++.+......+ +++++.|.++..+++. ..+..+.++.+.++++.+.+.|+++ ++. +..+ .
T Consensus 211 ~~~~--------~~~~~l~~~~~~~-~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-~ 276 (337)
T 3p1t_A 211 FGPS--------ELIAAMKRKQWFC-NVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGL-GYR-VASS-E 276 (337)
T ss_dssp ECCH--------HHHHHHHTTSCTT-CSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-BCCC-S
T ss_pred EeCH--------HHHHHHHhhcCCC-CCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCE-ECCC-C
Confidence 9988 8999887764433 7899999999999984 3345566666778889999999987 666 3444 4
Q ss_pred ceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHHHHHH
Q 042445 172 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRMKAFY 239 (246)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l~~~~ 239 (246)
+.|+|+..+. . +.+.++|.++||.+.||..|+.++++|+|++ ++++++++++.|+++.
T Consensus 277 ~~~~~~~~~~--------~-~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 277 ANFVLVENAA--------G-ERTLRFLRERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYS 334 (337)
T ss_dssp SSEEEEECTT--------T-HHHHHHHHHTTEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred CeEEEEEcCC--------H-HHHHHHHHHCCeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHh
Confidence 5566655542 2 3456678899999999999988999999998 6677777777776654
No 79
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.96 E-value=3.1e-29 Score=212.39 Aligned_cols=201 Identities=15% Similarity=0.119 Sum_probs=157.1
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCC-CCccccccCC-cccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNT-PFVSMGVFGS-IVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~-~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ...++..+.. .+++++++|+||.|+++|+|+|
T Consensus 174 ~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG 253 (394)
T 2ay1_A 174 LHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTG 253 (394)
T ss_dssp EESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEE
T ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccc
Confidence 5699999999999999999999999999999999999999887531 1223332322 3578999999999999999999
Q ss_pred EEEe--eCCCCCcchhhHHHH----HHHH-hhhcCCCCchHHHHHHHHHhhch-----HHHHHHHHHHHHHHHHHHHHHh
Q 042445 90 WLVT--SDPNGILQDSGIVDS----IKIF-LNISSDPATFIQGAVPQILEKTE-----EEFFSKIIDILRETADKCCDRL 157 (246)
Q Consensus 90 ~i~~--~~~~~~~~~~~~~~~----l~~~-~~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L 157 (246)
|+++ ++. ++++. +... ...+.++|++.|.++.++|+... +.++++.++.++++++.+.+.|
T Consensus 254 ~~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 326 (394)
T 2ay1_A 254 CLLALCADA-------ATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGEL 326 (394)
T ss_dssp EEEEECSSH-------HHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCH-------HHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 331 44443 3322 22343569999999999998641 4678899999999999999999
Q ss_pred hcCC---CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-ChHHHHHHHH
Q 042445 158 KEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-EPSALENGLG 233 (246)
Q Consensus 158 ~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-~~~~l~~~~~ 233 (246)
++++ ++. +..|.+|+|+|++++ . +.+..++.++||.+.|| +|++++. ++++++++++
T Consensus 327 ~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~ 387 (394)
T 2ay1_A 327 RDLSGSDRFG-FVAEHRGMFSRLGAT---------P-EQVKRIKEEFGIYMVGD--------SRINIAGLNDNTIPILAR 387 (394)
T ss_dssp HHHHTSSTTT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHH
T ss_pred HhcCCCCCee-EEcCCceEEEeeCCC---------H-HHHHHHHHhCCEEecCC--------CeEEeecCCHhhHHHHHH
Confidence 8863 355 456788999997553 2 45677888999999885 4999985 8899999999
Q ss_pred HHHHH
Q 042445 234 RMKAF 238 (246)
Q Consensus 234 ~l~~~ 238 (246)
+|.++
T Consensus 388 ~l~~~ 392 (394)
T 2ay1_A 388 AIIEV 392 (394)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 98765
No 80
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.96 E-value=2.4e-28 Score=202.89 Aligned_cols=192 Identities=18% Similarity=0.214 Sum_probs=152.9
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.+++.+++.+|+++| | ++|+||+|.++... .+ ...++..++++++.|+||.|+++|+|+||+
T Consensus 143 ~l~~p~nptG~~~~~~~l~~l~~~~---~-~li~De~~~~~~~~--~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 214 (335)
T 1uu1_A 143 FIPNPNNPTGHVFEREEIERILKTG---A-FVALDEAYYEFHGE--SY--VDFLKKYENLAVIRTFSKAFSLAAQRVGYV 214 (335)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHTT---C-EEEEECTTHHHHCC--CC--GGGGGTCSSEEEEEESTTTTTCGGGCCEEE
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhC---C-EEEEECcchhhcch--hH--HHHhhhCCCEEEEecchhhcCCcccCeEEE
Confidence 6699999999999999888888877 7 89999999987642 11 222344568899999999999999999999
Q ss_pred EeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCC
Q 042445 92 VTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEG 171 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 171 (246)
++++ ++++.+......+ ++|++.|.++.++|+. ..++++.++.++++++.+.+.|+++ ++. + .|.+
T Consensus 215 ~~~~--------~~~~~l~~~~~~~-~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~ 280 (335)
T 1uu1_A 215 VASE--------KFIDAYNRVRLPF-NVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-I-TDSR 280 (335)
T ss_dssp EECH--------HHHHHHHHHSCTT-CSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCC
T ss_pred EeCH--------HHHHHHHHhcCCC-CcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcE-E-cCCC
Confidence 9987 8888888765444 8899999999999985 4678888999999999999999887 665 3 4667
Q ss_pred ceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHHHHH
Q 042445 172 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRMKAF 238 (246)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l~~~ 238 (246)
|+|+|++++.. +.+.+.+.|.++||.+.| .++++|+|++. ++++++++++|+++
T Consensus 281 ~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~-----~~~~iRis~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 281 GNFVFVFMEKE-------EKERLLEHLRTKNVAVRS-----FREGVRITIGK-REENDMILRELEVF 334 (335)
T ss_dssp SSEEEEECCTH-------HHHHHHHHHHHHTEEEEE-----ETTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred CeEEEEECCCC-------CHHHHHHHHHHCCEEEEE-----CCCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 88999887641 333344556678999998 25799999975 45688888887653
No 81
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.96 E-value=8.9e-28 Score=201.95 Aligned_cols=207 Identities=18% Similarity=0.168 Sum_probs=160.8
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcc-cEEEEc
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIV-PLLTLG 75 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~i~~~ 75 (246)
|.+++.+++ + ++++||||||.+++.+++.+|+ +.+++++|+||+|+++.++. ......+..+ +++++.
T Consensus 154 ~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~---~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~i~~~ 227 (369)
T 3cq5_A 154 DVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERII---NVAPGIVIVDEAYAEFSPSP---SATTLLEKYPTKLVVSR 227 (369)
T ss_dssp HHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHH---HHCSSEEEEECTTGGGCCSC---CGGGGTTTCTTTEEEEE
T ss_pred HHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHH---HhCCCEEEEECCchhhcCCc---chHHHHhhCCCCEEEEE
Confidence 445555543 2 7789999999999966666555 55669999999999887541 1222224445 789999
Q ss_pred ccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
|+||.|+++|+|+||+++++ ++++.+......+ ++|++.|.++.++++. ..++++.++.++++++.+.+
T Consensus 228 s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~-~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~ 296 (369)
T 3cq5_A 228 TMSKAFDFAGGRLGYFVANP--------AFIDAVMLVRLPY-HLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAA 296 (369)
T ss_dssp ESSSTTSCGGGCCEEEEECT--------HHHHHHHTTSCTT-CSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHH
T ss_pred echHhcCCcccceEEEEeCH--------HHHHHHHHcCCCC-CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHH
Confidence 99999998999999999998 8888887765444 6899999999999984 46788899999999999999
Q ss_pred HhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHH
Q 042445 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRM 235 (246)
Q Consensus 156 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l 235 (246)
.|++. ++.. . +.+|+|+|++++. +..++ .+.|.++||.+.|| +.++++|++++ ++++++++++.|
T Consensus 297 ~L~~~-g~~~-~-~~~~~~~~~~~~~-------~~~~l-~~~l~~~gi~v~~~---~~~~~iRis~~-~~~~i~~~~~~l 361 (369)
T 3cq5_A 297 RLEEL-GYAV-V-PSESNFVFFGDFS-------DQHAA-WQAFLDRGVLIRDV---GIAGHLRTTIG-VPEENDAFLDAA 361 (369)
T ss_dssp HHHHH-TCEE-E-CCSSSEEEEECCS-------SHHHH-HHHHHHTTEECBCC---SCTTEEEEECC-CHHHHHHHHHHH
T ss_pred HHHhC-CCEE-C-CCCCeEEEEECCC-------CHHHH-HHHHHHCCEEEEEC---CCCCeEEEEeC-CHHHHHHHHHHH
Confidence 99885 6663 3 5567888987751 24444 44567899999998 23689999999 788899999999
Q ss_pred HHHHH
Q 042445 236 KAFYD 240 (246)
Q Consensus 236 ~~~~~ 240 (246)
.++++
T Consensus 362 ~~~~~ 366 (369)
T 3cq5_A 362 AEIIK 366 (369)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 88764
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.95 E-value=1.9e-26 Score=195.62 Aligned_cols=207 Identities=15% Similarity=0.173 Sum_probs=157.2
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCccc-EEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVP-LLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++|+||||.+++ +++|.++|++||+++|+||+|+.+.++..+.......+..++ .++++|+||.++++| ||
T Consensus 178 ~~~~~~nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~ 251 (398)
T 3a2b_A 178 CTDGIFSMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GF 251 (398)
T ss_dssp EEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EE
T ss_pred EEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cE
Confidence 78899999999987 899999999999999999999988764322211222232334 599999999999888 99
Q ss_pred EEeeCCCCCcchhhHHHHHHHH-hh-hcCCCCchHHH-HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 042445 91 LVTSDPNGILQDSGIVDSIKIF-LN-ISSDPATFIQG-AVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPK 167 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 167 (246)
+++++ ++++.+... .. ..++.+.+.|. ++..+++. ..++++.++.++++++.+.+.|+++ ++. +.
T Consensus 252 ~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~ 319 (398)
T 3a2b_A 252 VAGDA--------DVIDFLKHNARSVMFSASMTPASVASTLKALEI--IQNEPEHIEKLWKNTDYAKAQLLDH-GFD-LG 319 (398)
T ss_dssp EEECH--------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH--HHHCTHHHHHHHHHHHHHHHHHHHT-TCC-BC
T ss_pred EEeCH--------HHHHHHHHhcccceecCCCCHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHhc-CCC-cC
Confidence 99988 888888764 32 22345555665 55677774 2456788899999999999999987 666 34
Q ss_pred CCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC---CCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 168 KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
.|. |+++|+.++... +...+.+.|.++||.+.||..|.. ++++|++++. +++++++++++|.++++++
T Consensus 320 ~~~-g~~~~~~~~~~~------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 320 ATE-SPILPIFIRSNE------KTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp SCC-SSEEEEECCCHH------HHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCC-CCEEEEEcCCHH------HHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 454 789998886421 333444555667999999988763 6899999995 8999999999999998765
Q ss_pred h
Q 042445 243 A 243 (246)
Q Consensus 243 ~ 243 (246)
.
T Consensus 393 ~ 393 (398)
T 3a2b_A 393 E 393 (398)
T ss_dssp C
T ss_pred C
Confidence 3
No 83
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.94 E-value=1.7e-25 Score=189.83 Aligned_cols=206 Identities=14% Similarity=0.086 Sum_probs=159.2
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccC-Cccc-CCCCCccccccCCcccEEEEccccccc-ccCCceE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYG-HLAF-GNTPFVSMGVFGSIVPLLTLGSISKRG-IVPGLRL 88 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~g~r~ 88 (246)
++++||||||.+++ +++|.++|+++|+++|+||+|+ ++.. ++..+.+...+.+ +..+++.|+||.| +++|
T Consensus 182 ~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g--- 254 (401)
T 1fc4_A 182 ATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG--- 254 (401)
T ss_dssp EEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---
T ss_pred EEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---
Confidence 78999999999998 8999999999999999999996 7653 3433322222222 3569999999998 6666
Q ss_pred EEEEeeCCCCCcchhhHHHHHHHHh-h--hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 042445 89 GWLVTSDPNGILQDSGIVDSIKIFL-N--ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITC 165 (246)
Q Consensus 89 G~i~~~~~~~~~~~~~~~~~l~~~~-~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 165 (246)
||+++++ ++++.+.... . .+++++++.+.++..+++.. ...++.++.++++++.+.+.|+++ ++..
T Consensus 255 G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 323 (401)
T 1fc4_A 255 GYTAARK--------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMV--EAGSELRDRLWANARQFREQMSAA-GFTL 323 (401)
T ss_dssp EEEEECH--------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred EEEEcCH--------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence 9999987 8888887653 2 24478999999998888742 124677888899999999999987 6663
Q ss_pred ccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC---CCeEEEEee--cChHHHHHHHHHHHHHHH
Q 042445 166 PKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALENGLGRMKAFYD 240 (246)
Q Consensus 166 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~iRls~~--~~~~~l~~~~~~l~~~~~ 240 (246)
. |..++++|++++... +...+.+.|.++||.+.||..|+. .+++|++++ .+++++++++++|.++++
T Consensus 324 -~-~~~~~~~~~~~~~~~------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 395 (401)
T 1fc4_A 324 -A-GADHAIIPVMLGDAV------VAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK 395 (401)
T ss_dssp -C-CSSSSEEEEEEECHH------HHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred -c-CCCCCEEEEEcCChH------HHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 3 678889998886421 334445566678999999887754 468999998 489999999999999987
Q ss_pred HHh
Q 042445 241 RHA 243 (246)
Q Consensus 241 ~~~ 243 (246)
+..
T Consensus 396 ~~~ 398 (401)
T 1fc4_A 396 QLG 398 (401)
T ss_dssp HTT
T ss_pred HhC
Confidence 653
No 84
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.94 E-value=2.5e-25 Score=188.47 Aligned_cols=208 Identities=13% Similarity=0.067 Sum_probs=155.9
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccC-CcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG-SIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++|+||||.+++ +++|.++|++||+++|+||+|+...++..+.......+ ..+..++++|+||.++ |.+.||
T Consensus 180 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~ 254 (399)
T 3tqx_A 180 ATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGY 254 (399)
T ss_dssp EEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEE
T ss_pred EEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEE
Confidence 88899999999999 89999999999999999999974433332222222222 1235599999999987 344499
Q ss_pred EEeeCCCCCcchhhHHHHHHHH-hhh--cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 042445 91 LVTSDPNGILQDSGIVDSIKIF-LNI--SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPK 167 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~-~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 167 (246)
+++++ ++++.+... ... +.+.+++.+.++...++.. ..+.++.++.++++++.+.+.|+++ ++.. .
T Consensus 255 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~ 323 (399)
T 3tqx_A 255 TSGHK--------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL-KTEGPQLRKQLQENSRYFRAGMEKL-GFQL-V 323 (399)
T ss_dssp EEECH--------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHHH-TCCB-C
T ss_pred EEcCH--------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHc-CCCc-C
Confidence 99998 889988775 222 3367777777877777732 2668899999999999999999987 6663 3
Q ss_pred CCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC---CCeEEEEee--cChHHHHHHHHHHHHHHHHH
Q 042445 168 KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~iRls~~--~~~~~l~~~~~~l~~~~~~~ 242 (246)
+..|.++|+.++... +...+.+.|.++||.+.|+.++.. ++++|++++ .+++++++++++|.+++++.
T Consensus 324 -~~~~~~~~~~~~~~~------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 324 -PGNHPIIPVMLGDAQ------LATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp -CCSSSEEEEEEECHH------HHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred -CCCCCEEEEEeCCHH------HHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 555677888776532 334445556678999998765432 579999998 48999999999999998764
No 85
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.94 E-value=5.2e-25 Score=185.59 Aligned_cols=205 Identities=13% Similarity=0.073 Sum_probs=157.2
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++|+||||.+.+ +++|.++|++||+++|+||+|+.+.+. . + +...+..+++.|+||.+++++ ++||+
T Consensus 151 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~-~---~~~~~~di~~~s~sK~~~~~~-g~G~~ 219 (386)
T 2dr1_A 151 TITYNETSTGVLNP---LPELAKVAKEHDKLVFVDAVSAMGGAD---I-K---FDKWGLDVVFSSSQKAFGVPP-GLAIG 219 (386)
T ss_dssp EEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTBTTBC---C-C---TTTTTCSEEEEETTSTTCCCS-SCEEE
T ss_pred EEEeecCCcchhCC---HHHHHHHHHHcCCeEEEEccccccCcc---c-c---ccccCCcEEEEeccccccCCC-ceEEE
Confidence 78899999999987 899999999999999999999976542 1 1 222345699999999988763 38999
Q ss_pred EeeCCCCCcchhhHHHHHH----------------HHh---hhcCCCCchHHHHHHHHHhhchHH-HHHHHHHHHHHHHH
Q 042445 92 VTSDPNGILQDSGIVDSIK----------------IFL---NISSDPATFIQGAVPQILEKTEEE-FFSKIIDILRETAD 151 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~----------------~~~---~~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~ 151 (246)
++++ ++++.+. ... ...++.++..|.++..+++...+. .+++.++.++++++
T Consensus 220 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~ 291 (386)
T 2dr1_A 220 AFSE--------RFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAK 291 (386)
T ss_dssp EECH--------HHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred EECH--------HHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9998 8777662 111 223367888999998888752222 47888999999999
Q ss_pred HHHHHhhcCCCCccccCCC---CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChH
Q 042445 152 KCCDRLKEIPCITCPKKPE---GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPS 226 (246)
Q Consensus 152 ~l~~~L~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~ 226 (246)
.+.+.|+++ ++.. ..|. .++++|++++... +..++.. .|.++||.+.||..+..++++|++++ .+++
T Consensus 292 ~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~ 363 (386)
T 2dr1_A 292 MVREGVREI-GLDI-LAEPGHESPTITAVLTPPGI-----KGDEVYE-AMRKRGFELAKGYGSVKEKTFRIGHMGYMKFE 363 (386)
T ss_dssp HHHHHHHHT-TCCB-SSCTTCBCSSEEEEECCTTC-----CHHHHHH-HHHHTTEECEECCGGGTTTEEEEECCSSCCHH
T ss_pred HHHHHHHHc-CCee-CcCccccCCceEEEEcCCCC-----CHHHHHH-HHHHCCeEEecCccccCCCEEEEECCCCCCHH
Confidence 999999988 6763 4444 4788888876321 2445544 45566999999987766789999999 4899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 042445 227 ALENGLGRMKAFYDRHA 243 (246)
Q Consensus 227 ~l~~~~~~l~~~~~~~~ 243 (246)
++++++++|.+++++..
T Consensus 364 ~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 364 DIQEMLDNLREVINELK 380 (386)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999987754
No 86
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.93 E-value=8.9e-25 Score=185.96 Aligned_cols=208 Identities=14% Similarity=0.122 Sum_probs=150.6
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHH-cCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKK-LGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
+.+++.++++ ++++||||||.+++ +++|.++|++ +|+++|+||+|..+.+.. ++ . .++.+++.|
T Consensus 138 ~~l~~~i~~~t~~v~l~~p~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~----~~-~---~~~di~~~S 206 (404)
T 1e5e_A 138 GEVKKHMKPNTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMITN----PV-D---FGVDVVVHS 206 (404)
T ss_dssp THHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCC----GG-G---GTCSEEEEE
T ss_pred HHHHHhcCCCCcEEEEECCCCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCC----cc-c---cCCEEEEEc
Confidence 4566666544 88999999999996 8999999999 999999999999887541 22 1 246799999
Q ss_pred cccccccCCceE-EEEEeeCCCCCcchhhHHH-HHHHHhhh--cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRL-GWLVTSDPNGILQDSGIVD-SIKIFLNI--SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADK 152 (246)
Q Consensus 77 ~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~-~l~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (246)
+||.|+++|+|+ ||+++++ ++++ .+...... +.+++++.+.++.+.++. +....+...++.+.
T Consensus 207 ~sK~~~~~g~ri~G~~~~~~--------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~ 273 (404)
T 1e5e_A 207 ATKYINGHTDVVAGLICGKA--------DLLQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIRMKAESENAMK 273 (404)
T ss_dssp TTTTTTCSSCCCCEEEEECH--------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHH
T ss_pred CccccCCCCCCeEEEEEECH--------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHH
Confidence 999999999998 9999998 8887 77766443 346889999998888874 33344445566666
Q ss_pred HHHHhhcCCCCcc-------------ccCC----CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--
Q 042445 153 CCDRLKEIPCITC-------------PKKP----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-- 213 (246)
Q Consensus 153 l~~~L~~~~~~~~-------------~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-- 213 (246)
+.+.|++.+.+.. +..| .++++.| +++. ..+.+.+++.+.|| +.+|..|+.
T Consensus 274 l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~~~--------~~~~~~~~l~~~~i-~~~~~s~G~~~ 343 (404)
T 1e5e_A 274 VAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILKS--------GFEGAKKLLDNLKL-ITLAVSLGGCE 343 (404)
T ss_dssp HHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEE-EETT--------HHHHHHHHHHTCSS-SEESSCCCSSS
T ss_pred HHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE-EeCC--------CHHHHHHHHHhCCC-ceeccCCCCcc
Confidence 6666665432211 1111 2666666 6753 33456778889999 556654431
Q ss_pred -------------------------CCeEEEEeecChHHHHHHHHHHHHHHHHHhhc
Q 042445 214 -------------------------KDWLRITFAVEPSALENGLGRMKAFYDRHAEK 245 (246)
Q Consensus 214 -------------------------~~~iRls~~~~~~~l~~~~~~l~~~~~~~~~~ 245 (246)
++++|+|++. ++++++++.|+++++...++
T Consensus 344 sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~--e~~~~li~~l~~al~~~~~~ 398 (404)
T 1e5e_A 344 SLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--EDADELIADFKQGLDALLRS 398 (404)
T ss_dssp CEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHHCC
T ss_pred eeeecccccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHHHHHHHh
Confidence 5799999998 66788888888888765543
No 87
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.93 E-value=2.6e-25 Score=188.17 Aligned_cols=212 Identities=10% Similarity=0.093 Sum_probs=158.2
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.+++ + ++++|+||||.+++ +++|.++|+++|+++|+||+|... ..+. . +...+..+++.|
T Consensus 149 ~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g---~~~~-~---~~~~~~di~~~s 218 (393)
T 1vjo_A 149 EELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFGTLLLVDTVTSLG---GVPI-F---LDAWGVDLAYSC 218 (393)
T ss_dssp HHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTTTT---TSCC-C---TTTTTCSEEECC
T ss_pred HHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcCCEEEEECCcccc---CcCC-c---ccccCccEEEEc
Confidence 445555544 3 88899999999987 778899999999999999999932 1111 1 223345689999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHH----h----------------hhcC-CCCchHHHHHHHHHhhch
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIF----L----------------NISS-DPATFIQGAVPQILEKTE 135 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~----~----------------~~~~-~~~~~~q~~~~~~l~~~~ 135 (246)
+||.+++++ |+||+++++ ++++.++.. . .... +++++.|.++..+++...
T Consensus 219 ~sK~l~~~~-~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~ 289 (393)
T 1vjo_A 219 SQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIA 289 (393)
T ss_dssp SSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHH
T ss_pred CcccccCCC-ceEEEEECH--------HHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 999988888 999999998 888877432 0 1122 678889999999988533
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCC---ceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC
Q 042445 136 EEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEG---SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG 212 (246)
Q Consensus 136 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~ 212 (246)
+.++++.++.++++++.+.+.|+++ ++. +..|.+ +.+++++++... +..++...+++++||.+.||..|.
T Consensus 290 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~ 362 (393)
T 1vjo_A 290 QEGLANCWQRHQKNVEYLWERLEDI-GLS-LHVEKEYRLPTLTTVCIPDGV-----DGKAVARRLLNEHNIEVGGGLGEL 362 (393)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCGGGBCSSEEEEECCTTC-----CHHHHHHHHHHHHCEECEECCGGG
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCccccCCcEEEEEcCCCC-----CHHHHHHHHHhhCCEEEecCcccc
Confidence 4568889999999999999999987 676 344543 456777775321 345555554444599999999887
Q ss_pred CCCeEEEEe-e--cChHHHHHHHHHHHHHH
Q 042445 213 LKDWLRITF-A--VEPSALENGLGRMKAFY 239 (246)
Q Consensus 213 ~~~~iRls~-~--~~~~~l~~~~~~l~~~~ 239 (246)
.++++|+++ + .+++++++++++|.+++
T Consensus 363 ~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 363 AGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp TTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 789999994 3 36778999999998876
No 88
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.93 E-value=2.6e-26 Score=194.76 Aligned_cols=213 Identities=11% Similarity=0.156 Sum_probs=152.5
Q ss_pred hhhhhhhccc----cccCCcCCCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.++++ ++++|+||||. +++.+++++|.++|++||+++|+||+|.++.+.+.. .++..++...+++ |
T Consensus 174 ~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s 249 (397)
T 2ord_A 174 EDLRRKMSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---T 249 (397)
T ss_dssp HHHHHHCCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---E
T ss_pred HHHHHHhhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---e
Confidence 4455555443 88889999999 999999999999999999999999999987765532 2223333222333 7
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
|||.++ +|+|+||+++++ +++ .+... ...++++|++.+.++.++|+...+ ++.++.++++++.+.+
T Consensus 250 ~sK~~~-~G~r~G~~~~~~--------~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~ 316 (397)
T 2ord_A 250 TAKGLG-GGVPIGAVIVNE--------RAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMK 316 (397)
T ss_dssp ECGGGG-TTSCCEEEEECS--------TTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHH
T ss_pred eccccC-CCcCeEEEEEch--------Hhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHH
Confidence 899987 899999999988 555 44322 223447799999999988874222 4567778888888888
Q ss_pred HhhcCC-CCccc-cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHH
Q 042445 156 RLKEIP-CITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENG 231 (246)
Q Consensus 156 ~L~~~~-~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~ 231 (246)
.|++++ ++..+ ..+..|.++|++++... +..++ .+.|.++||.+.|+. ++++|++++ .++++++++
T Consensus 317 ~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~l-~~~l~~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~ 386 (397)
T 2ord_A 317 KLQEMKEEYDVVADVRGMGLMIGIQFREEV-----SNREV-ATKCFENKLLVVPAG----NNTIRFLPPLTVEYGEIDLA 386 (397)
T ss_dssp HHHHHHHHCTTEEEEEEETTEEEEEECTTS-----CHHHH-HHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHhCCceEEEEEEeEEEEEEECChH-----HHHHH-HHHHHHCCCEEccCC----CCEEEEECCcCCCHHHHHHH
Confidence 887642 12211 12334677888886421 24444 445667999999974 689999966 489999999
Q ss_pred HHHHHHHHHH
Q 042445 232 LGRMKAFYDR 241 (246)
Q Consensus 232 ~~~l~~~~~~ 241 (246)
+++|.+++++
T Consensus 387 ~~~l~~~l~~ 396 (397)
T 2ord_A 387 VETLKKVLQG 396 (397)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 89
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.93 E-value=1.3e-25 Score=191.93 Aligned_cols=209 Identities=19% Similarity=0.175 Sum_probs=144.9
Q ss_pred cCCcCCCc-cCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEEE
Q 042445 14 DFQVFHVG-SGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLV 92 (246)
Q Consensus 14 ~~p~NPtG-~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i~ 92 (246)
.+||| || .++|.+++++|.++|++||+++|+||+|+++.+.+... .+...+ ..+.+.||||.|++ |+|+||++
T Consensus 207 p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~---~~~di~s~sK~~~~-GlriG~~~ 280 (426)
T 1sff_A 207 PVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMG---VAPDLTTFAKSIAG-GFPLAGVT 280 (426)
T ss_dssp SBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTT---SCCSEEEECGGGGT-SSCCEEEE
T ss_pred cccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhhhcC---CCCCEEEEcccccC-CCceEEEE
Confidence 35567 99 88899999999999999999999999999877655322 222222 12334599999987 99999999
Q ss_pred eeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc----CCCCcccc
Q 042445 93 TSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKE----IPCITCPK 167 (246)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~ 167 (246)
+++ ++++.+... ...++++|++.|.++.++|+...+ ....+.++++++.+.+.|++ ++.+. ..
T Consensus 281 ~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~ 348 (426)
T 1sff_A 281 GRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAEKHPEIG-DV 348 (426)
T ss_dssp EEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTCTTEE-EE
T ss_pred EcH--------HHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeE-EE
Confidence 998 887776542 223447899999999877763221 12344555566666665554 33332 23
Q ss_pred CCCCceEEEEEecccccc--CCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHHHHHHHHHHh
Q 042445 168 KPEGSMFVMVKLNYSLLE--GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~l~~~~~~~~ 243 (246)
.+. |+|+|+++....-. +...+...+...|.++||.+.||..+ ++++|++++ .+++++++++++|.+++++.+
T Consensus 349 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 425 (426)
T 1sff_A 349 RGL-GAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIISQCFDEAK 425 (426)
T ss_dssp EEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEE-EEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCC--CCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 344 78999988531000 00012333455566789999998764 689999987 389999999999999987764
No 90
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.93 E-value=3.5e-25 Score=189.69 Aligned_cols=209 Identities=16% Similarity=0.113 Sum_probs=157.0
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccC-CcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG-SIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++++||||.+++ +++|.++|++||+++|+||+|+.+.++..+......++ ..+..+++.||||.++++| ||
T Consensus 199 ~~~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~ 272 (427)
T 2w8t_A 199 VLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GF 272 (427)
T ss_dssp EEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EE
T ss_pred EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CE
Confidence 88889999999998 89999999999999999999999887632222221122 2245799999999998887 99
Q ss_pred EEeeCCCCCcchhhHHHHHHHH-hh--hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 042445 91 LVTSDPNGILQDSGIVDSIKIF-LN--ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPK 167 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~-~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 167 (246)
+++++ ++++.+... .. .+++.+++.+.++..+++.. ..+++.++.++++++.+.+.|+++ ++....
T Consensus 273 v~~~~--------~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 341 (427)
T 2w8t_A 273 VVSNH--------PKFEAVRLACRPYIFTASLPPSVVATATTSIRKL--MTAHEKRERLWSNARALHGGLKAM-GFRLGT 341 (427)
T ss_dssp EEECC--------TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHH--TSCHHHHHHHHHHHHHHHHHHHHH-TCEESC
T ss_pred EEeCH--------HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCcccC
Confidence 99987 777766554 22 23367787777777777742 235778888999999999999887 665322
Q ss_pred CCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC---CCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 168 KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
.+..|.++|+.++... +...+.+.|.++||.+.|+..|+. .+++|++++. +++++++++++|.+++++.
T Consensus 342 ~~~~~~~~~~~~~~~~------~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~ 415 (427)
T 2w8t_A 342 ETCDSAIVAVMLEDQE------QAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAV 415 (427)
T ss_dssp SSCCSSEEEEEESSHH------HHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEECCHH------HHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3425678888886431 334445556677999999887754 4699999995 8999999999999998876
Q ss_pred h
Q 042445 243 A 243 (246)
Q Consensus 243 ~ 243 (246)
.
T Consensus 416 ~ 416 (427)
T 2w8t_A 416 G 416 (427)
T ss_dssp T
T ss_pred C
Confidence 5
No 91
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.93 E-value=7.8e-25 Score=185.80 Aligned_cols=208 Identities=17% Similarity=0.117 Sum_probs=152.4
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC-cccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS-IVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++|+||||.+++ +++|.++|++||+++|+||+|+.+.++..+.......+. ....++++|+||.|+++| ||
T Consensus 183 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~ 256 (401)
T 2bwn_A 183 AFESVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GY 256 (401)
T ss_dssp EEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EE
T ss_pred EEecCcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CE
Confidence 88999999999998 789999999999999999999966554322111111121 124689999999999888 99
Q ss_pred EEeeCCCCCcchhhHHHHHHHHh-h--hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 042445 91 LVTSDPNGILQDSGIVDSIKIFL-N--ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPK 167 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~~-~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 167 (246)
+++++ ++++.+.... . ...+.+++.+.++..+++......+++.++.++++++.+.+.|+++ ++. +.
T Consensus 257 ~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~ 326 (401)
T 2bwn_A 257 IAASA--------RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMP-II 326 (401)
T ss_dssp EEECH--------HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCC-BC
T ss_pred EecCH--------HHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCc-cc
Confidence 99987 8888877542 2 2334566788777777764223335778888999999999999887 666 34
Q ss_pred CCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC---CCeEEEEeec--ChHHHHHHHHHHHHHHHH
Q 042445 168 KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFAV--EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~iRls~~~--~~~~l~~~~~~l~~~~~~ 241 (246)
.+.++ ++|+.++... +..++...++.++||.+.|+..|+. .+++|++++. +++++++++++|++++++
T Consensus 327 ~~~~~-~~~~~~~~~~-----~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 327 DHGSH-IVPVVIGDPV-----HTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp CCSSS-CEEEECCCHH-----HHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred CCCCC-eEEEEeCChH-----HHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 55554 7888776421 1344444444688999999887754 2689999994 899999999999988764
No 92
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.93 E-value=7.5e-25 Score=184.82 Aligned_cols=201 Identities=12% Similarity=0.052 Sum_probs=152.6
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccC--CCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFG--NTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++||||||.+++ +++|.++|++||+++|+||+|..+.++ +... ...++.. ..++++|+||.++++| |
T Consensus 173 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~--~~~~~~~-~di~~~s~sK~~~~~G---G 243 (384)
T 1bs0_A 173 VTEGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGS--CWLQKVK-PELLVVTFGKGFGVSG---A 243 (384)
T ss_dssp EEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCH--HHHTTCC-CSEEEEESSSTTSSCC---E
T ss_pred EEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCch--HHhcCCC-CcEEEeeccchhhccC---c
Confidence 77889999999998 789999999999999999999877653 2221 1222221 2389999999999878 9
Q ss_pred EEEeeCCCCCcchhhHHHHHHHHh-hh--cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIFL-NI--SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCP 166 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~~-~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 166 (246)
|+++++ ++++.+.... .. +++++++.+.++.++++...+.+.++.++.++++++.+.+.|+++ ++..
T Consensus 244 ~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~- 313 (384)
T 1bs0_A 244 AVLCSS--------TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTL- 313 (384)
T ss_dssp EEEECH--------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEE-
T ss_pred EEEeCH--------HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCcc-
Confidence 999987 8888887652 22 236889999888888874221267788899999999999999987 5653
Q ss_pred cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC---CCeEEEEeec--ChHHHHHHHHHHHHH
Q 042445 167 KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFAV--EPSALENGLGRMKAF 238 (246)
Q Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~iRls~~~--~~~~l~~~~~~l~~~ 238 (246)
.+.+++++|++++... +...+.+.|.++||.+.|+..|+. .+++|++++. +++++++++++|.++
T Consensus 314 -~~~~~~~~~~~~~~~~------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 314 -ADSCSAIQPLIVGDNS------RALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp -CSCCSSBCCEEEESHH------HHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred -cCCCCCEEEEEeCCHH------HHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 3466778888886321 334445556677999999887753 4799999995 899999999998764
No 93
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.93 E-value=1.3e-25 Score=193.71 Aligned_cols=217 Identities=14% Similarity=0.082 Sum_probs=150.6
Q ss_pred cccCCcCCCc--cCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVG--SGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG--~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
+++.|+||+| .+++.+++++|.++|++||+++|+||+|.++...+..+ .....+. ...+.||||.+++ |+|+|
T Consensus 229 vi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-a~~~~~~---~pdi~t~sK~~~~-G~~~G 303 (453)
T 4ffc_A 229 IIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWF-ASEHEGI---VPDIVTMAKGIAG-GMPLS 303 (453)
T ss_dssp EEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTC---CCSEEEECGGGGT-TSSCE
T ss_pred EEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccc-hhhhcCC---CcchHhhhhhhcC-CcCeE
Confidence 8889989887 55588899999999999999999999999887665322 2222221 2225579999876 89999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEE-EFFSKIIDILRETADKCCDRLKEIPCITCPK 167 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 167 (246)
|+++++ ++++.+... ...+++.|+++|+++.++|+...+ .+.++.++.....++.+.+.+++++.+..
T Consensus 304 ~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-- 373 (453)
T 4ffc_A 304 AVTGRA--------ELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGE-- 373 (453)
T ss_dssp EEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEE--
T ss_pred EEEECH--------HHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEE--
Confidence 999988 888877644 334558899999999999984322 33444444444444445555555654432
Q ss_pred CCCCceEEEEEecccccc-CCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHHhh
Q 042445 168 KPEGSMFVMVKLNYSLLE-GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~~ 244 (246)
.+..|.++|+.+...... ........+...+.++||.+.|+..| .+++|++++. +++++++++++|.+++++..+
T Consensus 374 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (453)
T 4ffc_A 374 VRGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGITALSDIIRAKAS 451 (453)
T ss_dssp EEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred EEeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 334477888877431000 00012444566677899999997654 5789998774 899999999999999988765
Q ss_pred c
Q 042445 245 K 245 (246)
Q Consensus 245 ~ 245 (246)
+
T Consensus 452 ~ 452 (453)
T 4ffc_A 452 H 452 (453)
T ss_dssp -
T ss_pred c
Confidence 4
No 94
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.93 E-value=1.3e-24 Score=186.26 Aligned_cols=226 Identities=13% Similarity=0.102 Sum_probs=149.2
Q ss_pred hhhhhhhc----cc---cccCC-cC-CCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCcccccc-CCccc
Q 042445 2 ELINQDIT----RE---FSDFQ-VF-HVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVF-GSIVP 70 (246)
Q Consensus 2 e~~~~~~~----~~---~~~~p-~N-PtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~ 70 (246)
+.+++.++ .. ++++| || |+|. +++.+++++|.++|++||+++|+||+|.++.+.+..+ ....+ +...+
T Consensus 177 ~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~-~~~~~~~~~~d 255 (430)
T 3i4j_A 177 EGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPL-ALSRWSGVTPD 255 (430)
T ss_dssp THHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTTCCCS
T ss_pred HHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhhhhcCCCCc
Confidence 45555554 22 55555 45 7886 6788889999999999999999999999987765422 33333 22222
Q ss_pred EEEEcccccccccCC-ceEEEEEeeCCCCCcchhhHHHHHHHH-----hhhcCCCCchHHHHHHHHHhhch-HHHHHHHH
Q 042445 71 LLTLGSISKRGIVPG-LRLGWLVTSDPNGILQDSGIVDSIKIF-----LNISSDPATFIQGAVPQILEKTE-EEFFSKII 143 (246)
Q Consensus 71 ~i~~~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~ 143 (246)
+.+|||.+++ | +|+||+++++ ++++.+... ...+++.|+++|.++.++|+... +.+.++.+
T Consensus 256 ---i~t~sK~l~~-G~~r~G~~~~~~--------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 323 (430)
T 3i4j_A 256 ---IAVLGKGLAA-GYAPLAGLLAAP--------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAK 323 (430)
T ss_dssp ---EEEECGGGTT-TSSCCEEEEECH--------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred ---EEEEcccccC-CccccEEEEECH--------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHH
Confidence 3368999875 9 9999999988 999988863 33445889999999999998533 23455555
Q ss_pred HHHHHHHHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCC---CChHHHHHHHHHhcCeEEecCCCcC-C--CCeE
Q 042445 144 DILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI---NSDMEFALKLAKEESVIVLPGITVG-L--KDWL 217 (246)
Q Consensus 144 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~-~--~~~i 217 (246)
+.....++.+.+.+++++++.. ..+ .|.|+++.+........ ......+.+.+.++||.++|+..+. . ++++
T Consensus 324 ~~~~~~~~~l~~~~~~~~~~~~-~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~i 401 (430)
T 3i4j_A 324 ERGAQLLAGLQALQARFPQMMQ-VRG-TGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHL 401 (430)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEE-EEE-ETTEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEE
T ss_pred HHHHHHHHHHHHHHHhCCCeEE-EEE-EEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEE
Confidence 5555555555555555665542 333 46677777753210000 0012344556778999999984322 1 6889
Q ss_pred EEEee--cChHHHHHHHHHHHHHHHHH
Q 042445 218 RITFA--VEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 218 Rls~~--~~~~~l~~~~~~l~~~~~~~ 242 (246)
|++++ .+++++++++++|++++++.
T Consensus 402 Ri~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 402 LLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99988 48999999999999999765
No 95
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.93 E-value=3.1e-25 Score=188.41 Aligned_cols=219 Identities=16% Similarity=0.170 Sum_probs=157.8
Q ss_pred hhhhhhhccc---cccCCcCCCccCC--ChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE---FSDFQVFHVGSGF--SGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~---~~~~p~NPtG~~~--~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.++++ ++.+|+||||.++ +.+++++|.++|++||+++|+||+|+++.+.+..+ +....+...+++ |
T Consensus 174 ~~l~~~l~~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t 249 (406)
T 4adb_A 174 NSASALIDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---T 249 (406)
T ss_dssp HHHHTTCSTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---E
T ss_pred HHHHHHhcCCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---E
Confidence 3455555543 4445999999998 99999999999999999999999999887766433 222233333444 6
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
|||.++ +|+|+||+++++ ++++.+... ...+++.+++.+.++.++++.... ++..+.++++++.+.+
T Consensus 250 ~sK~~~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~ 317 (406)
T 4adb_A 250 TAKALG-GGFPVGALLATE--------ECARVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVE 317 (406)
T ss_dssp ECGGGG-TTSCCEEEEECH--------HHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHH
T ss_pred echhhc-CCCCeEEEEEcH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence 799998 899999999988 888877655 334457899999999988874222 4666677777788887
Q ss_pred HhhcCCC-Cccc-cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHH
Q 042445 156 RLKEIPC-ITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENG 231 (246)
Q Consensus 156 ~L~~~~~-~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~ 231 (246)
.|+++.. ...+ ..+..|+++++.++... ..+..++ .+.|.++||.+.|+. ++++|+++. .++++++++
T Consensus 318 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~-~~~l~~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~ 389 (406)
T 4adb_A 318 RLNTINHRYGLFSEVRGLGLLIGCVLNADY---AGQAKQI-SQEAAKAGVMVLIAG----GNVVRFAPALNVSEEEVTTG 389 (406)
T ss_dssp HHHHHHHHHCCEEEEEEETTEEEEEECTTT---TTCHHHH-HHHHHHTTEECEESS----TTEEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHhCCCceEEEEEEEEEEEEEeCCc---HHHHHHH-HHHHHHCCcEEeecC----CCeEEEECCCCCCHHHHHHH
Confidence 7766311 1101 12235788888886531 0023444 555667799999965 789999655 489999999
Q ss_pred HHHHHHHHHHHhh
Q 042445 232 LGRMKAFYDRHAE 244 (246)
Q Consensus 232 ~~~l~~~~~~~~~ 244 (246)
+++|.+++++..+
T Consensus 390 ~~~l~~~l~~~~~ 402 (406)
T 4adb_A 390 LDRFAAACEHFVS 402 (406)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987654
No 96
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.93 E-value=4.1e-25 Score=189.43 Aligned_cols=213 Identities=14% Similarity=0.130 Sum_probs=147.1
Q ss_pred cccCCc-CCCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQV-FHVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~-NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++|+ ||||. +++.+++++|.++|++||+++|+||+|+++.+.+..+ .....+...+ +.||||.|++ |+|+|
T Consensus 207 vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~-~~~~~~~~~d---i~s~sK~~~~-G~~ig 281 (433)
T 1zod_A 207 FIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPD---ILTLSKTLGA-GLPLA 281 (433)
T ss_dssp EEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS---EEEECHHHHT-TSSCE
T ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHh-HHhhcCCCCC---EEEecccccC-CCCee
Confidence 666774 78996 6788999999999999999999999999887655322 2222222222 3489999986 99999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHHh---hhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc----CCC
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIFL---NISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKE----IPC 162 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~ 162 (246)
|+++++ ++++.+.... ..+++.|++++.++.++++...+ +...+.++++++.+.+.|++ ++.
T Consensus 282 ~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~ 350 (433)
T 1zod_A 282 AIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLRRGLLDLMERFDC 350 (433)
T ss_dssp EEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred EEEEhH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999998 8888887631 13447799999998888874222 12344555566666666654 343
Q ss_pred CccccCCCCceEEEEEeccccccC--CCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHHHHHH
Q 042445 163 ITCPKKPEGSMFVMVKLNYSLLEG--INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGRMKAF 238 (246)
Q Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~l~~~ 238 (246)
+. .. +..|.|+|++++...-.+ .......+.+.+.++||.+.||..|+.++++|++++ .+++++++++++|.++
T Consensus 351 ~~-~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~ 428 (433)
T 1zod_A 351 IG-DV-RGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQA 428 (433)
T ss_dssp EE-EE-EEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred eE-EE-EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHH
Confidence 33 22 334677788876320000 001233344556689999999887755689999876 4899999999999999
Q ss_pred HHHH
Q 042445 239 YDRH 242 (246)
Q Consensus 239 ~~~~ 242 (246)
+++.
T Consensus 429 l~~~ 432 (433)
T 1zod_A 429 IERA 432 (433)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 97
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.92 E-value=4e-25 Score=185.88 Aligned_cols=204 Identities=14% Similarity=0.193 Sum_probs=150.6
Q ss_pred hhhhhhhccc----cccCCcCCCccC-CChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSG-FSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.++++ ++++|+||||.+ .+.+++++|.++|++||+++|+||+|+++...+..+ ++..++...+++ |
T Consensus 163 ~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~d~~---s 238 (375)
T 2eh6_A 163 DSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFY-AYQHFNLKPDVI---A 238 (375)
T ss_dssp HHHHTTCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---E
T ss_pred HHHHHHhcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcch-hhhhcCCCCCEE---E
Confidence 3455555433 778899999999 568899999999999999999999999866544322 333333222333 7
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
|||.++ +|+|+||+++++ ++++.+... ...+++.+++.+.++.++|+.. .+..+.++++++.+.+
T Consensus 239 ~SK~~~-~g~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~ 304 (375)
T 2eh6_A 239 LAKGLG-GGVPIGAILARE--------EVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV-----EKLLPHVREVGNYFKE 304 (375)
T ss_dssp ECGGGG-TTSCCEEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
T ss_pred Eccccc-CCCCeEEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
Confidence 889987 699999999998 877766552 2223367899999888887742 2677788889999999
Q ss_pred HhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHH
Q 042445 156 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLG 233 (246)
Q Consensus 156 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~ 233 (246)
.|++++. . . .+..|+++|++++.. ..++.. .|.++||.+.|+. ++++|++++ .++++++++++
T Consensus 305 ~L~~~~~-~-~-~~~~g~~~~~~~~~~-------~~~~~~-~l~~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~ 369 (375)
T 2eh6_A 305 KLKELGK-G-K-VKGRGLMLGLELERE-------CKDYVL-KALEKGLLINCTA----GKVLRFLPPLIIQKEHIDRAIS 369 (375)
T ss_dssp HHHHTTS-S-E-EEEETTEEEEECSSC-------CHHHHH-HHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHH
T ss_pred HHHHHhc-C-C-ceEEEEEEEEEEcCc-------HHHHHH-HHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHH
Confidence 9988743 2 2 345688899887631 345544 4557999999863 689999987 38999999999
Q ss_pred HHHHH
Q 042445 234 RMKAF 238 (246)
Q Consensus 234 ~l~~~ 238 (246)
+|+++
T Consensus 370 ~l~~~ 374 (375)
T 2eh6_A 370 VLREI 374 (375)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 98
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.92 E-value=2.5e-24 Score=183.31 Aligned_cols=215 Identities=13% Similarity=0.071 Sum_probs=155.8
Q ss_pred hhhhhhhcc---c--cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCC-cccEEEEc
Q 042445 2 ELINQDITR---E--FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGS-IVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~~---~--~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~ 75 (246)
+.+++.+++ + ++++|+||||.+++ +++|.++|++||+++|+||+|+++.++..+.......+. .+..+++.
T Consensus 176 ~~le~~l~~~~~~~vi~~~~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~ 252 (409)
T 3kki_A 176 DHLRMLIQRHGPGIIVVDSIYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTA 252 (409)
T ss_dssp HHHHHHHHHHCSCEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEE
T ss_pred HHHHHHHHhcCCeEEEECCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEe
Confidence 445555543 2 88899999999999 899999999999999999999986554322212122221 23458899
Q ss_pred ccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHH-hh--hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIF-LN--ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADK 152 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (246)
|+||.|+++| ||+++++ ++++.+... .. .+...++..+.++.+.++. ....++.++.++++++.
T Consensus 253 s~sK~~~~~g---g~v~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~--~~~~~~~~~~~~~~~~~ 319 (409)
T 3kki_A 253 SLAKTFAYRA---GAIWCNN--------EVNRCVPFISYPAIFSSTLLPYEAAGLETTLEI--IESADNRRQHLDRMARK 319 (409)
T ss_dssp ESSSTTCSSC---EEEEESS--------SGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHH
T ss_pred ecchhhCCCc---eEEEECH--------HHHHHHHHhCcCccccCCCcHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHH
Confidence 9999998876 9999988 666666553 22 3335677777777777763 22236788889999999
Q ss_pred HHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC---CCeEEEEeec--ChHH
Q 042445 153 CCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFAV--EPSA 227 (246)
Q Consensus 153 l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~iRls~~~--~~~~ 227 (246)
+.+.|+++ ++.. +.+++++|+.++... +...+.+.|.++||.+.|+..+.. .+++|+++.. ++++
T Consensus 320 l~~~L~~~-g~~~---~~~~~~~~~~~~~~~------~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~ 389 (409)
T 3kki_A 320 LRIGLSQL-GLTI---RSESQIIGLETGDER------NTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQ 389 (409)
T ss_dssp HHHHHHTT-TCCC---CCSSSEEEEEEESHH------HHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHH
T ss_pred HHHHHHHc-CCcc---CCCCCEEEEEeCCHH------HHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHH
Confidence 99999988 5542 257889998886532 333345556677999988654422 5899999984 8999
Q ss_pred HHHHHHHHHHHHHHH
Q 042445 228 LENGLGRMKAFYDRH 242 (246)
Q Consensus 228 l~~~~~~l~~~~~~~ 242 (246)
+++++++|.++++..
T Consensus 390 i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 390 IAKIIEVCSDAVNYG 404 (409)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998753
No 99
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.92 E-value=2.7e-24 Score=182.29 Aligned_cols=212 Identities=11% Similarity=0.085 Sum_probs=156.2
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++|+||||.+++ +++|.++|++||+++|+||+|+.+.. +. .+ ...+..+++.|+
T Consensus 155 ~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~---~~-~~---~~~~~d~~~~s~ 224 (406)
T 1kmj_A 155 ETLPTLFDEKTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH---PV-DV---QALDCDFYVFSG 224 (406)
T ss_dssp GGHHHHCCTTEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS---CC-CH---HHHTCSEEEEEG
T ss_pred HHHHHHhccCCeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC---CC-cc---cccCCCEEEEEc
Confidence 4556655543 88899999999999 89999999999999999999986432 11 11 122356889999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh----------------------hcCCCCchHHHHHH-HHHhhc
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN----------------------ISSDPATFIQGAVP-QILEKT 134 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~----------------------~~~~~~~~~q~~~~-~~l~~~ 134 (246)
||.++++| +||+++++ ++++.+..... +..+.+++.+.++. .+++..
T Consensus 225 ~K~~g~~G--~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 294 (406)
T 1kmj_A 225 HKLYGPTG--IGILYVKE--------ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYV 294 (406)
T ss_dssp GGTTSCTT--CEEEEECH--------HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHH
T ss_pred hhccCCCC--cEEEEEeH--------HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHH
Confidence 99998888 89999987 88887754321 11245666676555 455532
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCC--CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCc-
Q 042445 135 EEEFFSKIIDILRETADKCCDRLKEIPCITCPKKP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV- 211 (246)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f- 211 (246)
.+.++++.++.++++++.+.+.|++++++.. ..| .++++.| .++.. +..+ +.+.|.++||.+.||..|
T Consensus 295 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~-~~~~~------~~~~-~~~~l~~~gi~v~~g~~~~ 365 (406)
T 1kmj_A 295 SALGLNNIAEYEQNLMHYALSQLESVPDLTL-YGPQNRLGVIAF-NLGKH------HAYD-VGSFLDNYGIAVRTGHHCA 365 (406)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHTTSTTEEE-ESCTTCCSEEEE-EETTC------CHHH-HHHHHHHTTEECEEECTTC
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecCCCcCCEEEE-EECCC------CHHH-HHHHHhhCCcEEEeccccc
Confidence 2346778888999999999999999877763 455 5666555 56421 2444 456778899999998754
Q ss_pred -------CCCCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 212 -------GLKDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 212 -------~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
+.++++|++++. ++++++++++.|.++++.+
T Consensus 366 ~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 366 MPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp HHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 336899999995 8999999999999988754
No 100
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.92 E-value=1.1e-24 Score=186.07 Aligned_cols=198 Identities=12% Similarity=0.112 Sum_probs=144.0
Q ss_pred cccCCc-CCCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCC-ceE
Q 042445 12 FSDFQV-FHVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPG-LRL 88 (246)
Q Consensus 12 ~~~~p~-NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-~r~ 88 (246)
++++|+ ||||. +++.+++++|.++|++||+++|+||+|.++.+.+..+ .....+...++ .||||.|++ | +|+
T Consensus 216 vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~-~~~~~~~~~d~---~t~sK~~~~-G~~ri 290 (419)
T 2eo5_A 216 IFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLF-AIENFNTVPDV---ITLAKALGG-GIMPI 290 (419)
T ss_dssp EEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE---EEECGGGGT-TTSCC
T ss_pred EEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchh-hHHhcCCCCCE---EEecccccC-Cccce
Confidence 667775 46896 6788999999999999999999999999887665322 22222222233 379999885 9 999
Q ss_pred EEEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccC
Q 042445 89 GWLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKK 168 (246)
Q Consensus 89 G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 168 (246)
||+++++ +++ .+......+++.|+++|.++.++++. +++.++.++++++.+.+.|+++ +. ..
T Consensus 291 G~~~~~~--------~~~-~~~~~~~~t~~~n~~~~~aa~aal~~-----~~~~~~~~~~~~~~l~~~L~~~--~~-~~- 352 (419)
T 2eo5_A 291 GATIFRK--------DLD-FKPGMHSNTFGGNALACAIGSKVIDI-----VKDLLPHVNEIGKIFAEELQGL--AD-DV- 352 (419)
T ss_dssp EEEEEEG--------GGC-CC------CCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHTTS--SS-EE-
T ss_pred EEEEEch--------Hhh-cCCcccCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHh--hh-he-
Confidence 9999998 666 55213334457899999999999974 2227788889999999999876 33 22
Q ss_pred CCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHHHHHHHHHH
Q 042445 169 PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~l~~~~~~~ 242 (246)
+..|+|+++++.... .... +...|.++||.+.|+. ++++||+++ .+++++++++++|.+++++.
T Consensus 353 ~~~g~~~~i~~~~~~-----~~~~-~~~~l~~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 353 RGIGLAWGLEYNEKK-----VRDR-IIGESFKRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp EEETTEEEEECSCHH-----HHHH-HHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EeeeEEEEEEEecCc-----cHHH-HHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 334778888874210 1233 4455668999999964 689999876 48999999999999998653
No 101
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.92 E-value=1.1e-24 Score=184.45 Aligned_cols=208 Identities=17% Similarity=0.157 Sum_probs=153.0
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhh-HHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSF-VSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~-~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
+.+++.++++ ++++|+||||.+++.++ +++|.++|++||+++|+||+|.++.+.+..+ +....+...++ .|
T Consensus 173 ~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~---~~ 248 (392)
T 3ruy_A 173 EALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDM---YI 248 (392)
T ss_dssp HHHHHHCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE---EE
T ss_pred HHHHHHhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCE---EE
Confidence 4455656543 78889999999997665 9999999999999999999999887665433 22222222233 37
Q ss_pred cccccccCC-ceEEEEEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPG-LRLGWLVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 77 ~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
+||.++ +| +|+||+++++ ++++.+... ...++++|++.+.++.++++... . ++.++.++++++.+.
T Consensus 249 ~SK~l~-gG~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~-~~~~~~~~~~~~~l~ 316 (392)
T 3ruy_A 249 LGKALG-GGVFPISCAAANR--------DILGVFEPGSHGSTFGGNPLACAVSIAALEVLE--E-EKLTERSLQLGEKLV 316 (392)
T ss_dssp ECGGGG-TTTSCCEEEEECH--------HHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHH--H-TTHHHHHHHHHHHHH
T ss_pred Echhhh-CChhhhEEEEECH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHH--h-hhHHHHHHHHHHHHH
Confidence 789854 47 9999999988 888777654 33345889999999999998422 1 677888899999999
Q ss_pred HHhhcCC--CCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHH
Q 042445 155 DRLKEIP--CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEN 230 (246)
Q Consensus 155 ~~L~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~ 230 (246)
+.|++++ .+. ...+. |.++++.++. +..++. +.|.++||.+.||. ++++|+++. .+++++++
T Consensus 317 ~~L~~~~~~~~~-~~~~~-g~~~~~~~~~-------~~~~l~-~~l~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~ 382 (392)
T 3ruy_A 317 GQLKEIDNPMIT-EVRGK-GLFIGIELNE-------PARPYC-EQLKAAGLLCKETH----ENVIRIAPPLVISEEDLEW 382 (392)
T ss_dssp HHHTTCCCTTEE-EEEEE-TTEEEEEESS-------CSHHHH-HHHHTTTEECCCBT----TTEEEECCCTTCCHHHHHH
T ss_pred HHHHHhcCCCce-EEEee-eeEEEEEEcc-------hHHHHH-HHHHHCCcEEecCC----CCEEEEECCCCCCHHHHHH
Confidence 9998862 233 23344 4555555653 144554 45668999999876 789999966 48999999
Q ss_pred HHHHHHHHH
Q 042445 231 GLGRMKAFY 239 (246)
Q Consensus 231 ~~~~l~~~~ 239 (246)
++++|.+++
T Consensus 383 ~~~~l~~~l 391 (392)
T 3ruy_A 383 AFQKIKAVL 391 (392)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998876
No 102
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.92 E-value=3e-24 Score=185.19 Aligned_cols=213 Identities=17% Similarity=0.070 Sum_probs=146.5
Q ss_pred cccCCcCCCc--cCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVG--SGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG--~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
+++.|+||+| ..++.+++++|.++|++||+++|+||+|.++.+.+..+ ....++.... +.||||.+++ |+|+|
T Consensus 231 vi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~~-G~~iG 305 (451)
T 3oks_A 231 VVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMF-ACEHEGIDPD---LIVTAKGIAG-GLPLS 305 (451)
T ss_dssp EEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS---EEEECGGGGT-TSSCE
T ss_pred EEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccch-hhhhcCCCCC---eeeehhhhhC-CcceE
Confidence 7888888877 45577889999999999999999999999887665422 3333332222 3389999866 89999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEE-EFFSKIIDILRETADKCCDRLKEIPCITCPK 167 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 167 (246)
|+++++ ++++.+... ...+++.|+++|+++.++|+...+ .+.++.++.....++.+.+.+++++.+..
T Consensus 306 ~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-- 375 (451)
T 3oks_A 306 AVTGRA--------EIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGD-- 375 (451)
T ss_dssp EEEEEH--------HHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE--
T ss_pred EEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEE--
Confidence 999988 888877644 334558899999999999984322 33444444444444444444445554432
Q ss_pred CCCCceEEEEEecccccc-CCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHH
Q 042445 168 KPEGSMFVMVKLNYSLLE-GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~ 241 (246)
.+..|.++++.+...... ........+...+.++||.+.|+..| .+++|++++. +++++++++++|.+++++
T Consensus 376 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 376 VRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTY--GNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp EEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 233467888777431000 00013444566677899999997654 5789998774 899999999999998864
No 103
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.92 E-value=1.3e-24 Score=184.13 Aligned_cols=215 Identities=11% Similarity=0.129 Sum_probs=148.8
Q ss_pred hhhhhhhccc----cccCCcCCCccC-CChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSG-FSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.++++ +++.++||+|.. ++.+++++|.++|++||+++|+||+|.++...+..+ .....+. ...+.|
T Consensus 170 ~~l~~~l~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~---~~d~~t 245 (395)
T 3nx3_A 170 SSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEHAQI---LPDIMT 245 (395)
T ss_dssp HHHHTTCCTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTC---CCSEEE
T ss_pred HHHHHhccCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHhcCC---CCCEEE
Confidence 4455555543 444445666665 778899999999999999999999999886655322 2222221 222457
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhH-HHHHHHH-hhhcCCCCchHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGI-VDSIKIF-LNISSDPATFIQGAVPQILEKTE-EEFFSKIIDILRETADKC 153 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~-~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l 153 (246)
+||.+++ |+|+||+++++ ++ ++.+... ...+++.|++++.++.++++... +.+.++.++..+..++.+
T Consensus 246 ~sK~~~~-G~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l 316 (395)
T 3nx3_A 246 SAKALGC-GLSVGAFVINQ--------KVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSL 316 (395)
T ss_dssp ECGGGTT-TSCCEEEEECH--------HHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ecccccC-CCceEEEEEch--------hhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 8999875 89999999998 87 7777554 23445789999999999887432 234444444444445555
Q ss_pred HHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHH
Q 042445 154 CDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENG 231 (246)
Q Consensus 154 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~ 231 (246)
.+.+.+++.+.. .+..|.++++.++... +...+.+.|.++||.+.|+. ++++|++++. ++++++++
T Consensus 317 ~~~~~~~~~~~~--~~~~g~~~~~~~~~~~------~~~~~~~~l~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~ 384 (395)
T 3nx3_A 317 DELINEFDFCKK--RKGLGFMQGLSLDKSV------KVAKVIQKCQENALLLISCG----ENDLRFLPPLILQKEHIDEM 384 (395)
T ss_dssp HHHHHHCTTEEE--EEEETTEEEEEECTTS------CHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHH
T ss_pred HHHHHhCCCeEE--EEeEEEEEEEEeCCcc------hHHHHHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHH
Confidence 555555554432 2345778888886531 33444556778999999875 7899998764 89999999
Q ss_pred HHHHHHHHHH
Q 042445 232 LGRMKAFYDR 241 (246)
Q Consensus 232 ~~~l~~~~~~ 241 (246)
+++|++++++
T Consensus 385 l~~l~~~l~~ 394 (395)
T 3nx3_A 385 SEKLRKALKS 394 (395)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999998864
No 104
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.92 E-value=1.1e-23 Score=182.20 Aligned_cols=217 Identities=12% Similarity=-0.016 Sum_probs=151.7
Q ss_pred cccCC-cCCCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQ-VFHVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p-~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++.+| +|++|. +++.+++++|.++|++||+++|+||+|.++...+..+ ....++.... +.+|||.++..++|+|
T Consensus 225 ii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pd---i~t~sK~l~gG~~~lg 300 (460)
T 3gju_A 225 FIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-GSDHYGIKPD---LITIAKGLTSAYAPLS 300 (460)
T ss_dssp EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCCS---EEEECGGGTTTSSCCE
T ss_pred EEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCCCC---eeeeehhhcCCCCCeE
Confidence 45555 556665 7788999999999999999999999999887665322 2222222222 3468999755338999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH--------hhhcCCCCchHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcC
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF--------LNISSDPATFIQGAVPQILEKTE-EEFFSKIIDILRETADKCCDRLKEI 160 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 160 (246)
|+++++ ++++.+... ...+++.|+++++++.++|+... +.++++.++.....++.+.+.++++
T Consensus 301 ~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 372 (460)
T 3gju_A 301 GVIVAD--------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGH 372 (460)
T ss_dssp EEEEEH--------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEECH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999998 999988632 22345889999999999998533 3456666666666677777777777
Q ss_pred CCCccccCCCCceEEEEEeccccc--cCC---CChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHH
Q 042445 161 PCITCPKKPEGSMFVMVKLNYSLL--EGI---NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLG 233 (246)
Q Consensus 161 ~~~~~~~~~~~g~~~~~~~~~~~~--~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~ 233 (246)
+.+.. .. ..|.++++.+....- ... ......+.+.+.++||.+.|+. .++++||++. .++++++++++
T Consensus 373 ~~~~~-~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~~~~t~e~i~~~l~ 447 (460)
T 3gju_A 373 KNVGE-VR-GDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP---QGDILGFAPPLCLTREQADIVVS 447 (460)
T ss_dssp TTEEE-EE-EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS---SSCEEEECCCTTCCHHHHHHHHH
T ss_pred CCeEE-Ee-eeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC---CCCEEEEECCCCCCHHHHHHHHH
Confidence 65542 33 346677777753210 000 0113445666778899999975 3689999965 49999999999
Q ss_pred HHHHHHHHHhhc
Q 042445 234 RMKAFYDRHAEK 245 (246)
Q Consensus 234 ~l~~~~~~~~~~ 245 (246)
+|.+++++..++
T Consensus 448 ~l~~~l~~~~~~ 459 (460)
T 3gju_A 448 KTADAVKSVFAN 459 (460)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhc
Confidence 999999876543
No 105
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.91 E-value=7.9e-24 Score=180.25 Aligned_cols=214 Identities=11% Similarity=0.124 Sum_probs=155.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++|+||||.+++ +++|.++|+++|+++|+||+|+.+... . .+..+ +..+++.|+
T Consensus 160 ~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~-~~~~~---~~di~~~s~ 229 (420)
T 1t3i_A 160 EHFKTLLSEKTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP---L-DVQLI---DCDWLVASG 229 (420)
T ss_dssp HHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---C-CHHHH---TCSEEEEEG
T ss_pred HHHHHhhCCCceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc---C-chhhc---CCCEEEEeh
Confidence 3455555543 88899999999999 899999999999999999999864421 1 12222 355889999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh---------------------hcCCCCchHHHHHHH-HHhhch
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN---------------------ISSDPATFIQGAVPQ-ILEKTE 135 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~q~~~~~-~l~~~~ 135 (246)
||.++++| +||+++++ ++++.+..... +..+.+++.+.++.. +++...
T Consensus 230 sK~~~~~g--~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 299 (420)
T 1t3i_A 230 HKMCAPTG--IGFLYGKE--------EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT 299 (420)
T ss_dssp GGTTSCTT--CEEEEECH--------HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH
T ss_pred hhhcCCCc--eEEEEEch--------HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH
Confidence 99988878 99999988 88887765421 112466677766544 454322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC-----CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCC
Q 042445 136 EEFFSKIIDILRETADKCCDRLKEIPCITCPKKPE-----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT 210 (246)
Q Consensus 136 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~ 210 (246)
+..+++.++.++++++.+.+.|++++++.. ..|. .+.++++.++.. +..+ +.+.|.++||.+.||..
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~l~~~gi~v~~~~~ 371 (420)
T 1t3i_A 300 DLGMENIHNYEVELTHYLWQGLGQIPQLRL-YGPNPKHGDRAALASFNVAGL------HASD-VATMVDQDGIAIRSGHH 371 (420)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHTCTTEEE-ESCCGGGSCBCSEEEEEETTB------CHHH-HHHHHHTTTEECBCSCT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCCeEE-eCCCccccccCCEEEEEECCC------CHHH-HHHHHHHCCeEEeeccc
Confidence 335678888999999999999999877764 3443 244445556531 2334 45678899999999864
Q ss_pred c--------CCCCeEEEEeec--ChHHHHHHHHHHHHHHHHHh
Q 042445 211 V--------GLKDWLRITFAV--EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 211 f--------~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~ 243 (246)
| +.++++|++++. ++++++++++.|.++++++.
T Consensus 372 ~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 372 CTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp TCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred cchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4 336899999995 89999999999999987654
No 106
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.91 E-value=1.3e-23 Score=177.39 Aligned_cols=216 Identities=10% Similarity=0.053 Sum_probs=157.9
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.+++ + ++++||||||.+++ +++|.++|++||+++|+||+|+..... . . ....+..+++.|
T Consensus 138 ~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~g~~~---~-~---~~~~~~d~~~~s 207 (393)
T 3kgw_A 138 QEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRYQCLLLVDSVASLGGVP---I-Y---MDQQGIDIMYSS 207 (393)
T ss_dssp HHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTTTTSC---C-C---TTTTTCCEEEEE
T ss_pred HHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHcCCEEEEECCccccCcc---c-c---hhhcCCCEEEec
Confidence 455666654 3 88999999999998 778899999999999999998743211 1 1 122234578888
Q ss_pred ccccc-ccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh------------------------hcCCCCchHHHHHHHHH
Q 042445 77 ISKRG-IVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN------------------------ISSDPATFIQGAVPQIL 131 (246)
Q Consensus 77 ~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~q~~~~~~l 131 (246)
+||.+ +.+| +||+++++ ++++.+..... ..++.+...+.++..++
T Consensus 208 ~sK~~~~~~g--~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 277 (393)
T 3kgw_A 208 SQKVLNAPPG--ISLISFND--------KAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESL 277 (393)
T ss_dssp SSSTTCCCSS--CEEEEECH--------HHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHH
T ss_pred CcccccCCCc--eeEEEECH--------HHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHH
Confidence 99965 3444 89999988 88888765321 01245777777777777
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC----CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEec
Q 042445 132 EKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPE----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP 207 (246)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p 207 (246)
....+..+++.++.++++++.+.+.|+++ ++.. ..+. .++++++.++... +..++...+++++||.+.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~ 350 (393)
T 3kgw_A 278 ALIAEQGLENCWRRHREATAHLHKHLQEM-GLKF-FVKDPEIRLPTITTVTVPAGY-----NWRDIVSYVLDHFSIEISG 350 (393)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB-SSSSGGGBCSSEEEEECCTTB-----CHHHHHHHHHHHHCEECBC
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCee-ccCChhhcCCeEEEEeCCCCC-----CHHHHHHHHHHhCCEEEeC
Confidence 74344558889999999999999999988 6663 2232 3577777775432 3555655555555999999
Q ss_pred CCCcCCCCeEEEEe-ec--ChHHHHHHHHHHHHHHHHHhh
Q 042445 208 GITVGLKDWLRITF-AV--EPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 208 g~~f~~~~~iRls~-~~--~~~~l~~~~~~l~~~~~~~~~ 244 (246)
|..+..++++|+++ +. +++++++++++|.+++++..+
T Consensus 351 g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 351 GLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp CCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred CcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 98776689999998 63 899999999999999987654
No 107
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.91 E-value=4e-24 Score=183.68 Aligned_cols=214 Identities=16% Similarity=0.118 Sum_probs=140.7
Q ss_pred cccCCcCCCccCCC-hhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFS-GSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~-~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
+++.++||+|.+.+ .+++++|.++|++||+++|+||+|.++...+... .....+...+++ ||||.++ +|+|+||
T Consensus 206 i~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~-~~~~~~~~~di~---s~sK~~~-~G~riG~ 280 (439)
T 3dxv_A 206 FIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLH-CFEHEGFVPDIL---VLGKGLG-GGLPLSA 280 (439)
T ss_dssp EECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSS-GGGGTTCCCSEE---EECGGGG-TTSCCEE
T ss_pred EEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhcCCCCCEE---EEcchhc-CCcceEE
Confidence 55555677777655 4559999999999999999999999876555322 222232222333 8999998 5999999
Q ss_pred EEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHHHHhhcCCCCccccC
Q 042445 91 LVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEE-EFFSKIIDILRETADKCCDRLKEIPCITCPKK 168 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 168 (246)
+++++ ++++.+... ...++ .+++++.++.++++...+ ...++.++..+..++.+.+.+.+++.+.. .
T Consensus 281 ~~~~~--------~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~ 349 (439)
T 3dxv_A 281 VIAPA--------EILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGD--I 349 (439)
T ss_dssp EEEEH--------HHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE--E
T ss_pred EEECH--------HHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEE--E
Confidence 99998 888877654 23455 899999999988874322 22333333333333333333334554432 3
Q ss_pred CCCceEEEEEeccccccC--CCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHHh
Q 042445 169 PEGSMFVMVKLNYSLLEG--INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~ 243 (246)
+..|.|+++.+....... .......+.+.+.++||.+.|+..+ ++++|++++. +++++++++++|.+++++..
T Consensus 350 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 350 RGRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMN--GNVLEFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp EEETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred EEEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 345777777773210000 0012334455566789999997533 5899998763 89999999999999998763
No 108
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.91 E-value=3.8e-24 Score=178.80 Aligned_cols=205 Identities=10% Similarity=0.020 Sum_probs=142.8
Q ss_pred cccCCcCCC-ccCCChhhHHHHHHHHHHcCCEEEEccccCCc--ccCCCCCccccccCCcccEEEEcccccccccCCceE
Q 042445 12 FSDFQVFHV-GSGFSGSFVSPIAETAKKLGIMVIANEVYGHL--AFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRL 88 (246)
Q Consensus 12 ~~~~p~NPt-G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~--~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~ 88 (246)
++++||||| |.+++.+++++|+++|++||+++|+||+|... .+.+.....+. ...+ +++.|+||.|++++.
T Consensus 140 ~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d--~~~~s~sK~~~~~~g-- 213 (357)
T 3lws_A 140 LLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA--GLFD--SIYISFYKGLGGIAG-- 213 (357)
T ss_dssp EEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH--TTSS--EEEEESSSTTCCSSC--
T ss_pred EEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH--hcCC--EEEEeccccCCCCce--
Confidence 889999998 99999999999999999999999999998722 11121211111 1122 347899999844432
Q ss_pred EEEEeeCCCCCcchhhHHHHHHHHhhh-cCCC--CchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 042445 89 GWLVTSDPNGILQDSGIVDSIKIFLNI-SSDP--ATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITC 165 (246)
Q Consensus 89 G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 165 (246)
||+++++ ++++.+...... ..+. +...+.++...+. .+.++.+ .+.++++.+.+.|++++++..
T Consensus 214 g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~-~~~~~~~~l~~~L~~~~g~~~ 280 (357)
T 3lws_A 214 AILAGPA--------AFCQTARIWKRRYGGDLISLYPYIVSADYYYE----LRKDRMG-QYYEQAKQLAEQFNALPGVHT 280 (357)
T ss_dssp EEEEECH--------HHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHH----HHTTCHH-HHHHHHHHHHHHHHTSTTEEE
T ss_pred EEEEcCH--------HHHHHHHHHHHHhcCCcccchHHHHHHHHHHH----HHHHHHH-HHHHHHHHHHHHHHhCCCCee
Confidence 9999988 888888765432 2222 2233333333443 2333333 357788899999999888874
Q ss_pred ccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC-CCeEEEEee-----cChHHHHHHHHHHHHHH
Q 042445 166 PKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-KDWLRITFA-----VEPSALENGLGRMKAFY 239 (246)
Q Consensus 166 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~iRls~~-----~~~~~l~~~~~~l~~~~ 239 (246)
...|.+++|+|++++.... .+.+.+.+.|.++||.+.||..|.. .+++|++++ .+.+++++++++|.+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 281 TPEVPVSNMFHLHFDGQAA----DISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp ESSSCSSSEEEEEEESCHH----HHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred ccCCCcceEEEEEecCChH----HHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 3467789999998875310 1245567778899999999976653 348999987 37789999999998765
No 109
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.91 E-value=3.2e-24 Score=185.01 Aligned_cols=214 Identities=14% Similarity=0.123 Sum_probs=144.4
Q ss_pred cccCC-cCCCccCC-ChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCC-ceE
Q 042445 12 FSDFQ-VFHVGSGF-SGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPG-LRL 88 (246)
Q Consensus 12 ~~~~p-~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-~r~ 88 (246)
+++.+ +| ||.++ +++++++|.++|++||+++|+||+|.++.+.+..+ .....+-... +.||||.+++ | +|+
T Consensus 220 i~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-~~~~~~~~~d---i~t~sK~l~~-G~~~i 293 (452)
T 3n5m_A 220 IMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAF-GFMNYDVKPD---IITMAKGITS-AYLPL 293 (452)
T ss_dssp EECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCS---EEEECGGGGT-TSSCC
T ss_pred EEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccc-hhhhcCCCCC---EEeecccccC-CCcce
Confidence 44444 69 99766 88889999999999999999999999987665432 2222222222 3468999876 9 999
Q ss_pred EEEEeeCCCCCcchhhHHHHHHH----H---hhhcCCCCchHHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHHHHhhcC
Q 042445 89 GWLVTSDPNGILQDSGIVDSIKI----F---LNISSDPATFIQGAVPQILEKTEE-EFFSKIIDILRETADKCCDRLKEI 160 (246)
Q Consensus 89 G~i~~~~~~~~~~~~~~~~~l~~----~---~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~ 160 (246)
||+++++ ++++.+.. . ...+++.|+++++++.++|+...+ ..+++.++.....++.+.+.++++
T Consensus 294 g~~~~~~--------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 365 (452)
T 3n5m_A 294 SATAVKR--------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEH 365 (452)
T ss_dssp EEEEEEH--------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEECH--------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999998 88888743 1 223457899999999999884322 334444444444444444444555
Q ss_pred CCCccccCCCCceEEEEEeccccccC--C-CChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEee--cChHHHHHHHH
Q 042445 161 PCITCPKKPEGSMFVMVKLNYSLLEG--I-NSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFA--VEPSALENGLG 233 (246)
Q Consensus 161 ~~~~~~~~~~~g~~~~~~~~~~~~~~--~-~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~--~~~~~l~~~~~ 233 (246)
+.+.. .. ..|.++++.+....... . ......+.+.+.++||.+.|+..|.. ++++||+++ .++++++++++
T Consensus 366 ~~~~~-~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~ 443 (452)
T 3n5m_A 366 PLVGD-IR-GKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIG 443 (452)
T ss_dssp TTEEE-EE-ESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHH
T ss_pred CCeEE-EE-EEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHH
Confidence 54442 33 44566666664321000 0 00123455667789999999886643 689999866 49999999999
Q ss_pred HHHHHHHH
Q 042445 234 RMKAFYDR 241 (246)
Q Consensus 234 ~l~~~~~~ 241 (246)
+|.+++++
T Consensus 444 ~l~~~l~~ 451 (452)
T 3n5m_A 444 TLKTAMER 451 (452)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99998754
No 110
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.91 E-value=7.8e-24 Score=178.14 Aligned_cols=214 Identities=14% Similarity=0.031 Sum_probs=149.7
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcC--CEEEEccccCCcccCCCCCccccccCCcccEEEEc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLG--IMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~--~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
|.+++.++++ ++++|+||||.+++ +++|.++|+++| +++|+||+|+. +..+. .+. ..+..+++.
T Consensus 130 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~---~~~~~-~~~---~~~~di~~~ 199 (384)
T 1eg5_A 130 EELEKLVDEDTFLVSIMAANNEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTI---GKIPF-SLE---KLEVDYASF 199 (384)
T ss_dssp HHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTT---TTSCC-CCT---TTCCSEEEE
T ss_pred HHHHHHhCCCCeEEEEECCCCCcccccC---HHHHHHHHHhcCCceEEEEEhhhhc---CCccc-Cch---hcCCCEEEe
Confidence 4455555543 78899999999999 788999999999 99999999982 21111 222 223568899
Q ss_pred ccccccccCCceEEEEEeeCCCCCcchhhH--HHHHHHH----hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQDSGI--VDSIKIF----LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRET 149 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~--~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 149 (246)
|+||.++.+| +||+++++ ++ ...+... ....++++.+.+.++..+++. ...++++.++.++++
T Consensus 200 s~sK~~g~~G--~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~ 268 (384)
T 1eg5_A 200 SAHKFHGPKG--VGITYIRK--------GVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEI-AVEELSEAAKHMEKL 268 (384)
T ss_dssp EGGGGTSCTT--CEEEEECT--------TSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHH-HHHTHHHHHHHHHHH
T ss_pred cHHHhcCCCc--eEEEEEcC--------CCccccccccCcccccccCCCCChHHHHHHHHHHHH-HHHhHHHHHHHHHHH
Confidence 9999988888 79999987 32 1111110 112336789999998888885 245788899999999
Q ss_pred HHHHHHHhhcCCCCccccCCCC--ceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--------------
Q 042445 150 ADKCCDRLKEIPCITCPKKPEG--SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------- 213 (246)
Q Consensus 150 ~~~l~~~L~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------- 213 (246)
++.+.+.|++ +++..+.++.+ +.++++.++.. +..++ .+.|.++||.+.||..|+.
T Consensus 269 ~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~ 340 (384)
T 1eg5_A 269 RSKLVSGLMN-LGAHIITPLEISLPNTLSVSFPNI------RGSTL-QNLLSGYGIYVSTSSACTSKDERLRHVLDAMGV 340 (384)
T ss_dssp HHHHHHHHHT-TTCEECSCTTSBCTTEEEEECTTC------CHHHH-HHHHHHTTEECBC------------CHHHHTTC
T ss_pred HHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeCCC------CHHHH-HHHHhhCCeEEeccccccCCCCcchHHHHHcCC
Confidence 9999999988 47764333332 34566555421 24444 5566789999999887642
Q ss_pred -----CCeEEEEee--cChHHHHHHHHHHHHHHHHHhh
Q 042445 214 -----KDWLRITFA--VEPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 214 -----~~~iRls~~--~~~~~l~~~~~~l~~~~~~~~~ 244 (246)
.+++|++++ .+++++++++++|+++++++++
T Consensus 341 ~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 341 DRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp CHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred ChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 379999999 4899999999999999987643
No 111
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.91 E-value=1.2e-23 Score=175.05 Aligned_cols=212 Identities=16% Similarity=0.040 Sum_probs=151.3
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.+++ + ++++|+||||.+++ +++|.++|++||+++|+||+|+.... + ..+..+ +..+++.|
T Consensus 114 ~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~D~a~~~~~~---~-~~~~~~---~~d~~~~s 183 (353)
T 2yrr_A 114 EAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAGALFFLDAVTTLGML---P-FSMRAM---GVDYAFTG 183 (353)
T ss_dssp HHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTTTS---C-CCHHHH---TCSEEECC
T ss_pred HHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcCCeEEEEcCcccccc---c-cccccc---CceEEEec
Confidence 445555544 3 88899999999998 77999999999999999999963221 1 122222 23478889
Q ss_pred ccccc-ccCCceEEEEEeeCCCCCcchhhHHHHHHH----------------HhhhcCCCCchHHHHHHHHHhhchHHHH
Q 042445 77 ISKRG-IVPGLRLGWLVTSDPNGILQDSGIVDSIKI----------------FLNISSDPATFIQGAVPQILEKTEEEFF 139 (246)
Q Consensus 77 ~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~----------------~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 139 (246)
++|.+ +.+| +||+++++ ++++.++. ......+.+...+.++..++....+..+
T Consensus 184 ~~K~~~~~~g--~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 253 (353)
T 2yrr_A 184 SQKCLSAPPG--LAPIAASL--------EARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGV 253 (353)
T ss_dssp TTSTTCCCSS--CEEEEECH--------HHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CcccccCCCc--eEEEEECH--------HHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhH
Confidence 99954 4466 69999998 77766541 0111225677777777777764223347
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccccCCC--CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeE
Q 042445 140 SKIIDILRETADKCCDRLKEIPCITCPKKPE--GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWL 217 (246)
Q Consensus 140 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~i 217 (246)
++.++.++++++.+.+.|+++ ++.. ..+. +++++|++++... +..+ +.+.|.++||.+.||..|..++++
T Consensus 254 ~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~l~~~gi~v~~g~~~~~~~~i 325 (353)
T 2yrr_A 254 AARERRAREVYAWVLEELKAR-GFRP-YPKASPLPTVLVVRPPEGV-----DADR-LVRALYAEGVAVAGGIGPTRGQVL 325 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCEE-SCSSSBCTTEEEEECCTTC-----CHHH-HHHHHHHTTEECEECCGGGTTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCcc-ccCccCCCeEEEEECCCCC-----CHHH-HHHHHHHCCEEEeCCccccCCCeE
Confidence 788899999999999999887 7764 3343 5677788775321 2444 455566779999999887778999
Q ss_pred EEEee--cChHHHH-HHHHHHHHHHHH
Q 042445 218 RITFA--VEPSALE-NGLGRMKAFYDR 241 (246)
Q Consensus 218 Rls~~--~~~~~l~-~~~~~l~~~~~~ 241 (246)
|+++. .++++++ +++++|.++++.
T Consensus 326 Ri~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 326 RLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp EEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred EEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 99994 3778888 999999988753
No 112
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.91 E-value=4.4e-24 Score=182.55 Aligned_cols=215 Identities=12% Similarity=0.168 Sum_probs=150.9
Q ss_pred hhhhhhhccc----cccCCcCCCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.++++ +++.++||+|. +++.+++++|.++|++||+++|+||+|.++.+.+..+ .....+...+++ |
T Consensus 192 ~~le~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t 267 (420)
T 2pb2_A 192 HAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---T 267 (420)
T ss_dssp HHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---E
T ss_pred HHHHHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---E
Confidence 4455555543 66666777784 6999999999999999999999999999877665432 222222222333 7
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
|||.++ +|+|+||+++++ ++++.+... ...+++.|++++.++.++|+...+ ++..+.++++++.+.+
T Consensus 268 ~sK~l~-~G~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~ 335 (420)
T 2pb2_A 268 SAKALG-GGFPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQ 335 (420)
T ss_dssp ECGGGG-TTSCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHH
T ss_pred eccccc-CCCceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence 899987 899999999988 777766542 233447899999999888874322 3456667777777777
Q ss_pred HhhcC----CCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHH
Q 042445 156 RLKEI----PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALE 229 (246)
Q Consensus 156 ~L~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~ 229 (246)
.|+++ +.+. ...+ .|.+++++++... + .+..++ .+.|.++||.+.|+. ++++|+++. .++++++
T Consensus 336 ~L~~~~~~~~~~~-~~~~-~g~~~~v~~~~~~--~-~~~~~l-~~~l~~~Gi~v~~~~----~~~iRl~~~~~~t~eei~ 405 (420)
T 2pb2_A 336 HLQAIDEQFDIFS-DIRG-MGLLIGAELKPKY--K-GRARDF-LYAGAEAGVMVLNAG----ADVMRFAPSLVVEEADIH 405 (420)
T ss_dssp HHHHHHHHHCCEE-EEEE-ETTEEEEEECGGG--T-TCHHHH-HHHHHHTTEECEESS----TTEEEECCCTTCCHHHHH
T ss_pred HHHHHHhcCCCeE-EEEe-cceEEEEEECCCc--h-HHHHHH-HHHHHHCCCEEEeCC----CCEEEEECCCCCCHHHHH
Confidence 77653 3332 1233 4677888886421 0 013444 555667999999975 689999976 4899999
Q ss_pred HHHHHHHHHHHHH
Q 042445 230 NGLGRMKAFYDRH 242 (246)
Q Consensus 230 ~~~~~l~~~~~~~ 242 (246)
+++++|.+++++.
T Consensus 406 ~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 406 EGMQRFAQAVGKV 418 (420)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998765
No 113
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.91 E-value=2.3e-23 Score=176.07 Aligned_cols=216 Identities=13% Similarity=0.049 Sum_probs=155.3
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
+.+++.+++ + ++++|+||||.+++ +++|.++|+++|+++|+||++..... +. . +...+..+++.|
T Consensus 134 ~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~~~~~---~~-~---~~~~~~d~~~~s 203 (393)
T 2huf_A 134 DEIRDALLIHKPSVLFLTQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVASLGGA---PM-F---MDRWEIDAMYTG 203 (393)
T ss_dssp HHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTBTTB---CC-C---TTTTTCSEEECC
T ss_pred HHHHHHHhccCCcEEEEEccCCCccccCC---HHHHHHHHHHcCCEEEEEcccccCCC---Cc-c---hhhcCccEEEEC
Confidence 345555544 3 88899999999998 77899999999999999999864221 11 1 222235688999
Q ss_pred cccc-cccCCceEEEEEeeCCCCCcchhhHHHHHHHHh----h-------------------hc-CCCCchHHHHHHHHH
Q 042445 77 ISKR-GIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFL----N-------------------IS-SDPATFIQGAVPQIL 131 (246)
Q Consensus 77 ~sK~-~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~----~-------------------~~-~~~~~~~q~~~~~~l 131 (246)
+||. ++++|+ ||+++++ ++++.+.... . .. .+.+...+.++..++
T Consensus 204 ~sK~l~g~~G~--G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 273 (393)
T 2huf_A 204 SQKVLGAPPGI--TPVSFSH--------RAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAI 273 (393)
T ss_dssp SSSTTCCCSSC--EEEEECH--------HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHH
T ss_pred CCcccccCCCe--EEEEECH--------HHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHH
Confidence 9996 556886 9999987 8888876530 1 01 134556666666677
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC---CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecC
Q 042445 132 EKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPE---GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 208 (246)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg 208 (246)
+...+..+++.++.++++++.+.+.|+++ ++.. ..|. ++++++++++... +..++...+++++||.+.+|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~L~~~~gi~v~~g 346 (393)
T 2huf_A 274 AMACEEGLPALIARHEDCAKRLYRGLQDA-GFEL-YADPKDRLSTVTTIKVPQGV-----DWLKAAQYAMKTYLVEISGG 346 (393)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB-SSCGGGBCTTEEEEECCTTC-----CHHHHHHHHHHHHCEECBCC
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCee-ccCccccCCcEEEEEcCCCC-----CHHHHHHHHHHhCCEEEecC
Confidence 64223347788889999999999999987 6663 3442 3567777775321 35555555555679999999
Q ss_pred CCcCCCCeEEEEe-ec--ChHHHHHHHHHHHHHHHHHhh
Q 042445 209 ITVGLKDWLRITF-AV--EPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 209 ~~f~~~~~iRls~-~~--~~~~l~~~~~~l~~~~~~~~~ 244 (246)
..|..++++|+++ +. +++++++++++|.+++++...
T Consensus 347 ~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 347 LGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp CGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred cccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 8876689999999 53 688899999999999987653
No 114
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.91 E-value=1.4e-23 Score=181.39 Aligned_cols=214 Identities=11% Similarity=0.085 Sum_probs=146.3
Q ss_pred cccCCcCCCc--cCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVG--SGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG--~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++.+|+||+| .+++.+++++|.++|++||+++|+||+|.++...+..+ .....+...+ +.+|||.++.+|+|+|
T Consensus 223 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-~~~~~~~~pd---i~t~sK~l~gg~~~lg 298 (459)
T 4a6r_A 223 FVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF-GHQHFGFQPD---LFTAAKGLSSGYLPIG 298 (459)
T ss_dssp EEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCS---EEEECGGGGTTSSCCE
T ss_pred EEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCCCC---eeehhhhhcCCCCCcc
Confidence 6666655554 46689999999999999999999999999987666432 2222222222 3368999877669999
Q ss_pred EEEeeCCCCCcchhhHHHHHHH---H-hhhcCCCCchHHHHHHHHHhhch-HHHHHHHH-HHHHHHHHHHHHHhhcCCCC
Q 042445 90 WLVTSDPNGILQDSGIVDSIKI---F-LNISSDPATFIQGAVPQILEKTE-EEFFSKII-DILRETADKCCDRLKEIPCI 163 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~---~-~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~-~~~~~~~~~l~~~L~~~~~~ 163 (246)
|+++++ ++++.+.. . ...+++.|+++++++.++|+... +..+++.+ +.....++.+.+.|++++.+
T Consensus 299 ~v~~~~--------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 370 (459)
T 4a6r_A 299 AVFVGK--------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHV 370 (459)
T ss_dssp EEEECH--------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTE
T ss_pred ceeeCH--------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 999998 99988872 2 33345889999999999998533 23444444 44444445554556556555
Q ss_pred ccccCCCCceEEEEEeccccc--cC---CCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHHHH
Q 042445 164 TCPKKPEGSMFVMVKLNYSLL--EG---INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGRMK 236 (246)
Q Consensus 164 ~~~~~~~~g~~~~~~~~~~~~--~~---~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~l~ 236 (246)
.. ..+ .|.|+++++..... .. .......+.+.+.++||.++|+. +++||++. .+++++++++++|.
T Consensus 371 ~~-~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~~~~~~t~e~i~~~l~~l~ 443 (459)
T 4a6r_A 371 DD-VRG-VGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-----DHIVSAPPLVMTRAEVDEMLAVAE 443 (459)
T ss_dssp EE-EEE-ETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EE-EEE-EEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC-----CEEEEECCCCCCHHHHHHHHHHHH
Confidence 42 333 46677776753210 00 00013445566778899999963 89999965 49999999999999
Q ss_pred HHHHHHhh
Q 042445 237 AFYDRHAE 244 (246)
Q Consensus 237 ~~~~~~~~ 244 (246)
+++++..+
T Consensus 444 ~~l~~~~~ 451 (459)
T 4a6r_A 444 RCLEEFEQ 451 (459)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987653
No 115
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.91 E-value=1.1e-23 Score=180.37 Aligned_cols=203 Identities=12% Similarity=0.062 Sum_probs=145.3
Q ss_pred cccCC--cCCCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCC-ce
Q 042445 12 FSDFQ--VFHVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPG-LR 87 (246)
Q Consensus 12 ~~~~p--~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-~r 87 (246)
++++| |||||. +++.+++++|.++|++||+++|+||+|.++...+..+ .....+...++ .|+||.++ +| +|
T Consensus 208 vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~-~~~~~~~~~d~---~t~sK~l~-~G~~~ 282 (429)
T 1s0a_A 208 VIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPDI---LCLGKALT-GGTMT 282 (429)
T ss_dssp EEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE---EEECGGGG-TSSSC
T ss_pred EEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHH-HhhhcCCCCCE---EEeccccc-CCCcc
Confidence 66777 489995 6678899999999999999999999999876554322 22222222233 37899987 58 99
Q ss_pred EEEEEeeCCCCCcchhhHHHHHHHH------hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC-
Q 042445 88 LGWLVTSDPNGILQDSGIVDSIKIF------LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEI- 160 (246)
Q Consensus 88 ~G~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 160 (246)
+||+++++ ++++.+... ...++++|++++.++.++++...+ +...+.++++++.+.+.|+++
T Consensus 283 iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~ 351 (429)
T 1s0a_A 283 LSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPAR 351 (429)
T ss_dssp CEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGG
T ss_pred ceEEEeCH--------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHh
Confidence 99999988 888888753 223447799999999888874221 234566677788888888764
Q ss_pred --CCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHHHH
Q 042445 161 --PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGRMK 236 (246)
Q Consensus 161 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~l~ 236 (246)
+++. ...+ .|.++|++++... +..++ ...|.++||.+.|+ .+++|++++ .+++++++++++|+
T Consensus 352 ~~~~~~-~~~~-~g~~~~~~~~~~~-----~~~~l-~~~l~~~Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~ 418 (429)
T 1s0a_A 352 DAEMVA-DVRV-LGAIGVVETTHPV-----NMAAL-QKFFVEQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVN 418 (429)
T ss_dssp GCTTEE-EEEE-ETTEEEEEESSCB-----CHHHH-HHHHHHTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred cCCCEE-EEEE-eeEEEEEEECCcc-----cHHHH-HHHHHHCCCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 4443 1233 3678888886421 24444 44555889999883 378999976 48999999999999
Q ss_pred HHHHHHh
Q 042445 237 AFYDRHA 243 (246)
Q Consensus 237 ~~~~~~~ 243 (246)
+++++..
T Consensus 419 ~~~~~~~ 425 (429)
T 1s0a_A 419 RAVQDET 425 (429)
T ss_dssp HHTSSGG
T ss_pred HHHHhhh
Confidence 9876543
No 116
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.91 E-value=2.2e-23 Score=174.22 Aligned_cols=202 Identities=10% Similarity=0.047 Sum_probs=148.2
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++|+||||.+++ +++|.++|++||+++|+||+|+.+... . .+ ...+..+++.|+||.++++ .++||+
T Consensus 136 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~---~-~~---~~~~~di~~~s~~K~~~~~-~g~G~~ 204 (366)
T 1m32_A 136 AMVHSETTTGMLNP---IDEVGALAHRYGKTYIVDAMSSFGGIP---M-DI---AALHIDYLISSANKCIQGV-PGFAFV 204 (366)
T ss_dssp EEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTTTSC---C-CT---TTTTCSEEEEESSSTTCCC-SSEEEE
T ss_pred EEecccCCcceecC---HHHHHHHHHHcCCEEEEECCccccCcC---c-cc---cccCccEEEecCcccccCC-CceEEE
Confidence 68899999999998 789999999999999999999854321 1 11 2223458899999975332 347999
Q ss_pred EeeCCCCCcchhhHHHHHHHHh------------------hh-cCCCCchHHHHHHHHHhhchHHH--HHHHHHHHHHHH
Q 042445 92 VTSDPNGILQDSGIVDSIKIFL------------------NI-SSDPATFIQGAVPQILEKTEEEF--FSKIIDILRETA 150 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~------------------~~-~~~~~~~~q~~~~~~l~~~~~~~--~~~~~~~~~~~~ 150 (246)
++++ ++++.+.... .. .++.++..+.++..+++.. ..+ +++.++.+++++
T Consensus 205 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~g~~~~~~~~~~~~~ 275 (366)
T 1m32_A 205 IARE--------QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKEL-AKEGGVAARHQRYQQNQ 275 (366)
T ss_dssp EEEH--------HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH-HHHTHHHHHHHHHHHHH
T ss_pred EECH--------HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHH-HHccCHhHHHHHHHHHH
Confidence 9998 7766543210 00 1366778888888888742 233 678888999999
Q ss_pred HHHHHHhhcCCCCccccC--CCCceEEEEEecc--ccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--C
Q 042445 151 DKCCDRLKEIPCITCPKK--PEGSMFVMVKLNY--SLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--E 224 (246)
Q Consensus 151 ~~l~~~L~~~~~~~~~~~--~~~g~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~ 224 (246)
+.+.+.|+++ ++..+.+ +.+++++|++++. .. +..++ .+.|.++||.+.||..| .++++|++++. +
T Consensus 276 ~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~l~~~gi~v~~~~~~-~~~~iRi~~~~~~~ 347 (366)
T 1m32_A 276 RSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDPQY-----RFSEF-YRRLKEQGFVIYPGKVS-QSDCFRIGNIGEVY 347 (366)
T ss_dssp HHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCTTC-----CHHHH-HHHHHHTTEECEECCCS-SSCEEEEECCSSCC
T ss_pred HHHHHHHHHC-CCeeccCchhcCceEEEEEcCccCCC-----CHHHH-HHHHHHCCEEEECCcCC-CCCEEEEecCCCCC
Confidence 9999999987 6663222 2467899988864 21 24444 55566779999998876 47899999995 7
Q ss_pred hHHHHHHHHHHHHHHHH
Q 042445 225 PSALENGLGRMKAFYDR 241 (246)
Q Consensus 225 ~~~l~~~~~~l~~~~~~ 241 (246)
++++++++++|.+++++
T Consensus 348 ~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 348 AADITALLTAIRTAMYW 364 (366)
T ss_dssp HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 89999999999988754
No 117
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.91 E-value=8.1e-24 Score=179.21 Aligned_cols=210 Identities=17% Similarity=0.207 Sum_probs=148.8
Q ss_pred hhhhhhhccc----cccCCcCCCccCC-ChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGF-SGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.++++ +++.++||||.++ +.+++++|.++|++||+++|+||+|.++.+.+..+ ++...+...+++ |
T Consensus 176 ~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s 251 (395)
T 1vef_A 176 EALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---T 251 (395)
T ss_dssp HHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---E
T ss_pred HHHHHHhccCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---E
Confidence 4455555543 4444468999765 68889999999999999999999999765544322 222222222333 8
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
|||.+++ |+|+||+++++ ++++.+... ...+++++++.+.++.++++...+ ....+.++++++.+.+
T Consensus 252 ~sK~~~~-g~~~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~ 319 (395)
T 1vef_A 252 LAKALGG-GVPLGVAVMRE--------EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFME 319 (395)
T ss_dssp ECGGGGT-TSSCEEEEEEH--------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHH
T ss_pred EcccccC-CCceEEEEehH--------HHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHH
Confidence 8999886 89999999998 877766542 223346789999988888874222 3567778888999999
Q ss_pred HhhcCCCCccc-cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHH
Q 042445 156 RLKEIPCITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGL 232 (246)
Q Consensus 156 ~L~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~ 232 (246)
.|++++. ..+ ..+..|+++|++++.. ..++...+++++||.+.|+. ++++|++++ .+++++++++
T Consensus 320 ~l~~~~~-~~~~~~~~~g~~~~~~~~~~-------~~~l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~ 387 (395)
T 1vef_A 320 KLRAIPS-PKIREVRGMGLMVGLELKEK-------AAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVV 387 (395)
T ss_dssp HHHTSCC-TTEEEEEEETTEEEEEESSC-------SHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHH
T ss_pred HHHHhhc-CceEEEEEEEEEEEEEEcCh-------HHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHH
Confidence 9988642 111 1234578889888632 44555544438899999963 689999887 3899999999
Q ss_pred HHHHHHH
Q 042445 233 GRMKAFY 239 (246)
Q Consensus 233 ~~l~~~~ 239 (246)
++|++++
T Consensus 388 ~~l~~~l 394 (395)
T 1vef_A 388 EAVRAVL 394 (395)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998875
No 118
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.91 E-value=1.1e-22 Score=171.13 Aligned_cols=213 Identities=14% Similarity=0.103 Sum_probs=155.2
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.+++ + ++++|+||||.+++ +++|.++|++||+++|+|++|+...... . +...+..+++.|
T Consensus 117 ~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~----~---~~~~~~d~~~~s 186 (384)
T 3zrp_A 117 GEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKYVELIVVDGVSSVGAEEV----K---AEEWNVDVYLTA 186 (384)
T ss_dssp HHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGGEEEEEEECTTTTTTSCC----C---TTTTTCSEEEEE
T ss_pred HHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhcCCEEEEECcccccCccc----c---ccccCCCEEEec
Confidence 455565554 2 88899999999998 8889999999999999999988543221 1 112234588999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHH-------------HHHhh----------hc-CCCCchHHHHHHHHHh
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSI-------------KIFLN----------IS-SDPATFIQGAVPQILE 132 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l-------------~~~~~----------~~-~~~~~~~q~~~~~~l~ 132 (246)
++|.+++ +.++||+++++ ++++.+ ..... .. .+.+...+.++..++.
T Consensus 187 ~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~ 257 (384)
T 3zrp_A 187 SQKALGS-AAGLGLLLLSP--------KALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFR 257 (384)
T ss_dssp TTSTTCC-CSSEEEEEECH--------HHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHH
T ss_pred CcccccC-CCceEEEEECH--------HHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHH
Confidence 9998642 23499999988 877776 22211 01 2556667777767776
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC----CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecC
Q 042445 133 KTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPE----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 208 (246)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg 208 (246)
...+..+++.++.++++++.+.+.|+++ ++.. ..+. +++++|++++.. +..++ .+.|.++||.+.+|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~l~~~gi~v~~g 328 (384)
T 3zrp_A 258 LIEKEGIENRIKRHTMVASAIRAGLEAL-GLEI-VARRPESYSNTVTGVILKVA------DPQKV-LAGTVNEGVEFAPG 328 (384)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB-SCSSGGGBCSSEEEEECSSS------CHHHH-HHHHHTTTCCCEEC
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeE-ccCcccccCccEEEEECCCC------CHHHH-HHHHHHCCEEEecC
Confidence 4334447889999999999999999988 7763 4444 577888877642 24444 55566779999998
Q ss_pred CCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHHh
Q 042445 209 ITVGLKDWLRITFAV--EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 209 ~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~ 243 (246)
..+.. +++|+++.. +++++++++++|.+++++..
T Consensus 329 ~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 329 VHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp CCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 85444 999999883 89999999999999998764
No 119
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.90 E-value=2e-23 Score=175.86 Aligned_cols=215 Identities=16% Similarity=0.098 Sum_probs=142.5
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccC-CCCCccccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFG-NTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++||||||. +..++++|.++|++||+++|+||+|..+..+ .....+. .. ...+++.|+||.+ +|+|+||
T Consensus 146 ~~~~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~-~~---~~di~~~S~sK~l--~g~~~G~ 217 (374)
T 2aeu_A 146 ITGSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPAL-KL---GADLVVTSTDKLM--EGPRGGL 217 (374)
T ss_dssp EECBCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHH-HH---TCSEEEEETTSSS--SSCSCEE
T ss_pred EEccCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcc-cc---CCcEEEecCcccc--cCcceEE
Confidence 56899999997 7789999999999999999999999876421 1011011 12 2348899999994 5689999
Q ss_pred EEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHH----HHHHHHHhhcC---CC
Q 042445 91 LVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRET----ADKCCDRLKEI---PC 162 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~----~~~l~~~L~~~---~~ 162 (246)
+++++ ++++.++.... .+.+++++.+.++..++.......+++..+..+.. ++.+.+.|..+ +|
T Consensus 218 ~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g 289 (374)
T 2aeu_A 218 LAGKK--------ELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNIN 289 (374)
T ss_dssp EEEEH--------HHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEE
T ss_pred EEECH--------HHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC
Confidence 99998 99998887654 33367889999998888754221222222222222 45555555543 24
Q ss_pred CccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC-CCeEEEEeec-C--hHHHHHHHHHHHHH
Q 042445 163 ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-KDWLRITFAV-E--PSALENGLGRMKAF 238 (246)
Q Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~iRls~~~-~--~~~l~~~~~~l~~~ 238 (246)
+.....|.+.++.|..++... ...++.+++..+++++||.+.||..|.. ++++|++++. + +.+++++.+.|+++
T Consensus 290 ~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~ 367 (374)
T 2aeu_A 290 IVYERTPTGFVIKRVYKDDTI--NIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVES 367 (374)
T ss_dssp EEEEECSSEEEEEEEESSHHH--HHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHH
T ss_pred cceeeCCceEEEEeecccccc--cccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHH
Confidence 442345666666665433210 0001223666788889999999987754 6799999984 2 23478888888888
Q ss_pred HHHHhh
Q 042445 239 YDRHAE 244 (246)
Q Consensus 239 ~~~~~~ 244 (246)
+++..+
T Consensus 368 l~~~~~ 373 (374)
T 2aeu_A 368 IKMAFK 373 (374)
T ss_dssp HHHHTC
T ss_pred HHHHhc
Confidence 877654
No 120
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.90 E-value=1.7e-22 Score=170.75 Aligned_cols=204 Identities=12% Similarity=0.034 Sum_probs=147.3
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccc-cccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKR-GIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~g~r~G~ 90 (246)
++++|+||||.+++ +++|.++|+++|+++|+||+|+.... + ..+... +..+++.|+||. ++.+|+ ||
T Consensus 139 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~---~-~~~~~~---~~d~~~~s~sK~~~~~~g~--G~ 206 (392)
T 2z9v_A 139 SVCHHDTPSGTINP---IDAIGALVSAHGAYLIVDAVSSFGGM---K-THPEDC---KADIYVTGPNKCLGAPPGL--TM 206 (392)
T ss_dssp EEESEEGGGTEECC---HHHHHHHHHHTTCEEEEECTTTBTTB---S-CCGGGG---TCSEEEECSSSTTCCCSCC--EE
T ss_pred EEeccCCCCceecc---HHHHHHHHHHcCCeEEEEcccccCCc---c-cccccc---cceEEEecCcccccCCCce--eE
Confidence 88899999999998 78999999999999999999984221 1 112222 245888999995 445664 99
Q ss_pred EEeeCCCCCcchhhHHHHHHHHh--------------------hh-cCCCCchHHHHHHHHHhhchHHH-HHHHHHHHHH
Q 042445 91 LVTSDPNGILQDSGIVDSIKIFL--------------------NI-SSDPATFIQGAVPQILEKTEEEF-FSKIIDILRE 148 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~~--------------------~~-~~~~~~~~q~~~~~~l~~~~~~~-~~~~~~~~~~ 148 (246)
+++++ ++++.++... .. ..+.+...+.++..++.. ...+ +++.++.+++
T Consensus 207 l~~~~--------~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~g~~~~~~~~~~ 277 (392)
T 2z9v_A 207 MGVSE--------RAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDL-YLNEGPEAVWARHAL 277 (392)
T ss_dssp EEECH--------HHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHH-HHHHCHHHHHHHHHH
T ss_pred EEECH--------HHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH-HHhccHHHHHHHHHH
Confidence 99988 8888775311 11 224456666666666663 2333 7788889999
Q ss_pred HHHHHHHHhhcCCCCccccC-CC---CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEe-e-
Q 042445 149 TADKCCDRLKEIPCITCPKK-PE---GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-A- 222 (246)
Q Consensus 149 ~~~~l~~~L~~~~~~~~~~~-~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~-~- 222 (246)
+++.+.+.|+++ ++.. .. +. .+++++++++... +..++...+.+++||.+.||..+..++++|+++ +
T Consensus 278 ~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~ 350 (392)
T 2z9v_A 278 TAKAMRAGVTAM-GLSV-WAASDSIASPTTTAVRTPDGV-----DEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGP 350 (392)
T ss_dssp HHHHHHHHHHHT-TCCB-SSSSGGGBCTTEEEEECCTTC-----CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGG
T ss_pred HHHHHHHHHHHc-CCee-ccCCccccCCceEEEECCCCC-----CHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCccc
Confidence 999999999887 6763 33 32 4777888775321 345555554444599999998766689999995 5
Q ss_pred -cChHHHHHHHHHHHHHHHHHh
Q 042445 223 -VEPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 223 -~~~~~l~~~~~~l~~~~~~~~ 243 (246)
.+++++++++++|.+++++..
T Consensus 351 ~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 351 TAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp GCSHHHHHHHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHHHHHHHcC
Confidence 489999999999999987654
No 121
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.90 E-value=2.4e-23 Score=173.96 Aligned_cols=204 Identities=12% Similarity=-0.005 Sum_probs=142.3
Q ss_pred cccCCcCCC-ccCCChhhHHHHHHHHHHcCCEEEEccccCCccc--CCCCCccccccCCcccEEEEcccccccccCCceE
Q 042445 12 FSDFQVFHV-GSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAF--GNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRL 88 (246)
Q Consensus 12 ~~~~p~NPt-G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~ 88 (246)
++++||||| |.+++.+++++|.++|++||+++|+|++|..+.. .+..... +..... +++.|+||.+++++.
T Consensus 142 ~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~~d-~~~~s~sK~~~~~~g-- 215 (359)
T 3pj0_A 142 LIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEE---ICALFD-SVYVSFYKGIGGIAG-- 215 (359)
T ss_dssp EEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHH---HHTTCS-EEEEESSSTTCCSSC--
T ss_pred EEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHH---hhccCC-EEEEeccccCCCcce--
Confidence 888999998 7999999999999999999999999999875542 1211111 111112 445689998877642
Q ss_pred EEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHH--HHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 042445 89 GWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQ--GAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITC 165 (246)
Q Consensus 89 G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 165 (246)
||+++++ ++++.++.... .....+...+ .++...+. ... +..+.+.++++.+.+.|++++++..
T Consensus 216 g~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~----~~~-~~~~~~~~~~~~l~~~L~~~~g~~~ 282 (359)
T 3pj0_A 216 AILAGND--------DFVQEAKIWKRRYGGDLISLYPYILSADYYFE----KRI-GKMAEYFEAAKGLAERFNSCSGVKT 282 (359)
T ss_dssp EEEEECH--------HHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHH----HHG-GGHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred EEEECCH--------HHHHHHHHHHHHhCCCcchhHHHHHHHHHHHH----HHH-HHhHHHHHHHHHHHHHHhhCCCcee
Confidence 7788877 89998876533 2222222222 22223333 223 3334467888999999999888874
Q ss_pred ccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--CCeEEEEee-----cChHHHHHHHHHHHHH
Q 042445 166 PKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFA-----VEPSALENGLGRMKAF 238 (246)
Q Consensus 166 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~iRls~~-----~~~~~l~~~~~~l~~~ 238 (246)
...|.+++++|++++.... .+.+.+.+.|.++||.+.||..|+. .+++|++++ .+.+++++++++|.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 283 VPEVPVSNMFHVYFENSAD----EIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp ESSSCSSSEEEEEESSCHH----HHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred eccCCcceEEEEEecCccc----hhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 3367888999988864310 1355667788899999999987764 468999887 3788999999998765
No 122
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.90 E-value=9.9e-23 Score=172.35 Aligned_cols=216 Identities=13% Similarity=0.050 Sum_probs=154.2
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
+.+++.+++ + ++++||||||.+++ +++|.++|+++|+++|+||+|.... .+. .+..+ +..+++.|
T Consensus 133 ~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~Dea~~~g~---~~~-~~~~~---~~d~~~~s 202 (396)
T 2ch1_A 133 ETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQHDCLLIVDAVASLCG---VPF-YMDKW---EIDAVYTG 202 (396)
T ss_dssp HHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTBTT---BCC-CTTTT---TCCEEECC
T ss_pred HHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEEccccccC---Ccc-chhhc---CcCEEEEc
Confidence 445555544 2 88999999999999 7788899999999999999998321 111 12222 22366789
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHH-----------------h------h-hcCCCCchHHHHHHHHHh
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIF-----------------L------N-ISSDPATFIQGAVPQILE 132 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~-----------------~------~-~~~~~~~~~q~~~~~~l~ 132 (246)
++|.++.+ .++||+++++ ++++.+... . . ..++.+...+.++..++.
T Consensus 203 ~~K~~~~~-~g~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 273 (396)
T 2ch1_A 203 AQKVLGAP-PGITPISISP--------KALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALA 273 (396)
T ss_dssp CC-CCCCC-SSCEEEEECH--------HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHH
T ss_pred CCccccCC-CCeEEEEECH--------HHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHH
Confidence 99975432 3469999988 777776431 0 1 112467778888888887
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCC----ceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecC
Q 042445 133 KTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEG----SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 208 (246)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg 208 (246)
...+.++++.++.++++++.+.+.|+++ |+.. ..+.+ +.+++++++... +..++...+++++||.+.+|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~L~~~~gi~v~~g 346 (396)
T 2ch1_A 274 QIAEEGLENQIKRRIECAQILYEGLGKM-GLDI-FVKDPRHRLPTVTGIMIPKGV-----DWWKVSQYAMNNFSLEVQGG 346 (396)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCB-SSCSGGGBCTTEEEEECCTTC-----CHHHHHHHHHHHHCBCCBCC
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCee-ccCCccccCCceEEEEcCCCC-----CHHHHHHHHHHhCCEEEecC
Confidence 5334568888999999999999999987 6763 44443 347887775321 35556555555679999998
Q ss_pred CCcCCCCeEEEEe-ec--ChHHHHHHHHHHHHHHHHHh
Q 042445 209 ITVGLKDWLRITF-AV--EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 209 ~~f~~~~~iRls~-~~--~~~~l~~~~~~l~~~~~~~~ 243 (246)
..+..++++|+++ +. +++++++++++|.+++++..
T Consensus 347 ~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 347 LGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp CGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred ccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 8766689999999 42 78899999999999998764
No 123
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.90 E-value=2.4e-22 Score=167.20 Aligned_cols=204 Identities=12% Similarity=0.040 Sum_probs=148.4
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHc--CCEEEEccccCCcccCCCCCccccccCCcccEEEEccccc-ccccCCceE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKL--GIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISK-RGIVPGLRL 88 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~--~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~~g~r~ 88 (246)
++++|+||||.+++ +++|.++|++| |+++|+||+|+.... +. .+.. .+..+++.|+|| .++.+| +
T Consensus 126 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~-~~~~---~~~d~~~~s~~K~~~~~~g--~ 193 (352)
T 1iug_A 126 LLVHSETSTGALAD---LPALARAFKEKNPEGLVGADMVTSLLVG---EV-ALEA---MGVDAAASGSQKGLMCPPG--L 193 (352)
T ss_dssp EEESEETTTTEECC---HHHHHHHHHHHCTTCEEEEECTTTBTTB---CC-CSGG---GTCSEEEEESSSTTCCCSC--E
T ss_pred EEEEecCCcceecC---HHHHHHHHHhhCCCCEEEEECCccccCc---ce-eccc---cCeeEEEecCcccccCCCc--e
Confidence 78899999999988 78999999999 999999999973221 11 1111 234578999999 544445 7
Q ss_pred EEEEeeCCCCCcchhhHHHH---------HH----HH--hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 89 GWLVTSDPNGILQDSGIVDS---------IK----IF--LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 89 G~i~~~~~~~~~~~~~~~~~---------l~----~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
||+++++ ++++. +. .. .....+.+...+.++..++.... .++++.++.++++++.+
T Consensus 194 G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l 264 (352)
T 1iug_A 194 GFVALSP--------RALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVL-PRLEEHLALKAWQNALL 264 (352)
T ss_dssp EEEEECH--------HHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHG-GGHHHHHHHHHHHHHHH
T ss_pred eEEEECH--------HHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999987 66544 22 11 11223567777877777776422 23788889999999999
Q ss_pred HHHhhcCCCCccccCCC-CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHH
Q 042445 154 CDRLKEIPCITCPKKPE-GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALEN 230 (246)
Q Consensus 154 ~~~L~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~ 230 (246)
.+.|+++ ++. +..|. .++++|++++... +..++ .+.|.++||.+.||..+..++++|++++. +++++++
T Consensus 265 ~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~ 336 (352)
T 1iug_A 265 YGVGEEG-GLR-PVPKRFSPAVAAFYLPEGV-----PYARV-KEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALG 336 (352)
T ss_dssp HHHHHHT-TCE-ESCSSBCTTCEEEECCTTC-----CHHHH-HHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHH
T ss_pred HHHHHHC-CCc-ccccccCCeEEEEEcCCCC-----CHHHH-HHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHH
Confidence 9999987 776 34453 6788888876321 24444 55566779999998855457899999994 7899999
Q ss_pred HHHHHHHHHHHHhh
Q 042445 231 GLGRMKAFYDRHAE 244 (246)
Q Consensus 231 ~~~~l~~~~~~~~~ 244 (246)
++++|.+++++...
T Consensus 337 ~~~~l~~~~~~~~~ 350 (352)
T 1iug_A 337 VAGMFREVLEEILP 350 (352)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999887643
No 124
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.90 E-value=6.7e-23 Score=172.87 Aligned_cols=207 Identities=10% Similarity=0.152 Sum_probs=145.9
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHH----HcCCEEEEccccCCcccCCCCCccccccCCcccEEE
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAK----KLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLT 73 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~----~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~ 73 (246)
|.+++.++++ ++++|+||||.+++ +++|.++|+ ++|+++|+||+|+.... +. . +......++
T Consensus 145 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~~---~~-~---~~~~~~d~~ 214 (390)
T 1elu_A 145 AVLANHLGPKTRLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSL---PL-D---FSRLEVDYY 214 (390)
T ss_dssp HHHHTTCCTTEEEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTTB---CC-C---TTTSCCSEE
T ss_pred HHHHHhcCCCceEEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCCc---CC-C---hhhcCCCEE
Confidence 3455555443 88999999999999 888999999 99999999999985321 11 1 122235588
Q ss_pred EcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHH----------------------hhh-cCCCCchHHHHHHHH
Q 042445 74 LGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIF----------------------LNI-SSDPATFIQGAVPQI 130 (246)
Q Consensus 74 ~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~----------------------~~~-~~~~~~~~q~~~~~~ 130 (246)
+.|+||. .++|.++||+++++ ++++.+... ..+ ..+.++..+.++..+
T Consensus 215 ~~s~~K~-~~~~~g~G~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 285 (390)
T 1elu_A 215 AFTGHKW-FAGPAGVGGLYIHG--------DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAA 285 (390)
T ss_dssp EEESSST-TCCCTTCEEEEECT--------TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHH
T ss_pred Ecccccc-ccCCCceEEEEECH--------HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHH
Confidence 9999994 34556799999987 666655431 111 225577777777777
Q ss_pred HhhchH-HHHHHHHHHHHHHHHHHHHHhhcCCCCcccc--CCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEec
Q 042445 131 LEKTEE-EFFSKIIDILRETADKCCDRLKEIPCITCPK--KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP 207 (246)
Q Consensus 131 l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p 207 (246)
+....+ .++++.++.++++++.+.+.|++++++..+. .+.++++ +++++... +..++ .+.|.++||.+.|
T Consensus 286 l~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~-~~~l~~~gi~v~~ 358 (390)
T 1elu_A 286 LQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLV-SFTVDSPL-----GHRAI-VQKLEEQRIYLRT 358 (390)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEE-EEEECSSS-----CHHHH-HHHHHHTTEECEE
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEE-EEEcCCCC-----CHHHH-HHHHHHCCEEEEe
Confidence 763222 3488889999999999999999887776432 2345554 44775321 24444 4456788999999
Q ss_pred CCCcCCCCeEEEEee--cChHHHHHHHHHHHH
Q 042445 208 GITVGLKDWLRITFA--VEPSALENGLGRMKA 237 (246)
Q Consensus 208 g~~f~~~~~iRls~~--~~~~~l~~~~~~l~~ 237 (246)
|. .++++|+++. .+++++++++++|++
T Consensus 359 ~~---~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 359 IA---DPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp ET---TTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred cC---CCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 76 3689999986 489999999988865
No 125
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.90 E-value=4.8e-22 Score=168.73 Aligned_cols=214 Identities=10% Similarity=0.069 Sum_probs=154.5
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCC-cccCCCCCccccccCCcccEEEEc
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGH-LAFGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
+.+++.+++ + ++++|+|| ...+ +++|.++|++||+++|+||+|+. +.+.+..... +. ...+++.
T Consensus 153 ~~l~~~l~~~~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~~--~~di~~~ 222 (407)
T 2dkj_A 153 EEVRRLALEHRPKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNP---LP--YAHVVTS 222 (407)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCC---TT--TCSEEEE
T ss_pred HHHHHHHhhcCCeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCc---cc--cccEEEE
Confidence 345555542 2 66799998 4444 89999999999999999999997 5444422211 11 1458899
Q ss_pred ccccccccCCceEEEEEee-CCCCCcchhhHHHHHHHHhhhc--CCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTS-DPNGILQDSGIVDSIKIFLNIS--SDPATFIQGAVPQILEKTEEEFFSKIIDILRETADK 152 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~-~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (246)
|+||. ++|.|+||++++ + ++++.+......+ ++.++....++..++......++++.++.++++++.
T Consensus 223 s~sK~--l~g~~~G~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 292 (407)
T 2dkj_A 223 TTHKT--LRGPRGGLILSNDP--------ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKR 292 (407)
T ss_dssp ESSGG--GCCCSCEEEEESCH--------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred ecccc--CCCCCceEEEECCH--------HHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99995 458889999998 5 8888887764322 233444444666666642246788899999999999
Q ss_pred HHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCc------CCCCeEEEEee----
Q 042445 153 CCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV------GLKDWLRITFA---- 222 (246)
Q Consensus 153 l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f------~~~~~iRls~~---- 222 (246)
+.+.|+++ ++..+..+.+++++|++++... . +.+.+.+.|.++||.+.+|..+ ..++++|++++
T Consensus 293 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~ 366 (407)
T 2dkj_A 293 LAEELARR-GYRIVTGGTDNHLFLVDLRPKG---L--TGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITT 366 (407)
T ss_dssp HHHHHHHT-TCEEGGGSCSSSEEEEECGGGT---C--CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHH
T ss_pred HHHHHHhC-CceeecCCCCceEEEEECcccC---C--CHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccc
Confidence 99999988 6664333567899998886421 1 3444556678899999998754 12678999996
Q ss_pred --cChHHHHHHHHHHHHHHHH
Q 042445 223 --VEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 223 --~~~~~l~~~~~~l~~~~~~ 241 (246)
.+++++++++++|.+++++
T Consensus 367 ~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 367 RGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp TTCCGGGHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhc
Confidence 5889999999999999876
No 126
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.90 E-value=1.6e-23 Score=179.60 Aligned_cols=210 Identities=14% Similarity=0.046 Sum_probs=139.4
Q ss_pred cccCCcCCC-cc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHV-GS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPt-G~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++|+||+ |. .++++++++|.++|++||+++|+||+|.++ ..+..+ ....++-... +.||||.++ +|+|+|
T Consensus 206 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~iG 279 (434)
T 3l44_A 206 ILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGG-AQDLLGVTPD---LTALGKVIG-GGLPIG 279 (434)
T ss_dssp EEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSC-HHHHHTCCCS---EEEEEGGGG-TTSSCE
T ss_pred EEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccH-HHHHcCCCCC---eeehhhhhc-CCcCee
Confidence 666665655 44 448899999999999999999999999988 554322 2222221112 457999987 799999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH----hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh----cCC
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF----LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLK----EIP 161 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~ 161 (246)
|+++++ ++++.+... ...+++.|++++.++.++++...+ ++..+.++++.+.+.+.|+ .++
T Consensus 280 ~~~~~~--------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~ 348 (434)
T 3l44_A 280 AYGGKK--------EIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAKHN 348 (434)
T ss_dssp EEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEcH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999988 888877652 223458899999999998874322 2233333444444444443 343
Q ss_pred CCccccCCCCceEEEEEeccccccC-------CCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHH
Q 042445 162 CITCPKKPEGSMFVMVKLNYSLLEG-------INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGR 234 (246)
Q Consensus 162 ~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~ 234 (246)
.+. ..+..|.++++.+......+ .......+.+.|.++||.+.|+. .+++|+++..+++++++++++
T Consensus 349 ~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~~l~~ 422 (434)
T 3l44_A 349 IDI--TLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK----YEAWFLTTEHTKEDIEYTIEA 422 (434)
T ss_dssp CCE--EEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSST----TCCEECCTTCCHHHHHHHHHH
T ss_pred CCE--EEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecC----CCcEEEecccCHHHHHHHHHH
Confidence 222 13345677777674321100 00012345566778899999875 467899877799999999999
Q ss_pred HHHHHHHHhh
Q 042445 235 MKAFYDRHAE 244 (246)
Q Consensus 235 l~~~~~~~~~ 244 (246)
|++++++..+
T Consensus 423 l~~~l~~~~~ 432 (434)
T 3l44_A 423 VGRAFAALAD 432 (434)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999987654
No 127
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.89 E-value=2.6e-22 Score=167.56 Aligned_cols=198 Identities=12% Similarity=0.008 Sum_probs=147.3
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHc-CCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccc-cCCceEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKL-GIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGI-VPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~g~r~G 89 (246)
++++||||||.+++ +++|.++|++| |+++|+|++|..+.... .+.. ..+++.|++|.++ ++| +|
T Consensus 135 ~~~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~~~~~----~~~~-----~d~~~~s~~K~~~~~~G--~g 200 (362)
T 3ffr_A 135 CLTHNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLPYPKF----DWTK-----IDSVFFSVQKCFGLPAG--LG 200 (362)
T ss_dssp EEESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTTSSCC----CTTS-----CSEEEEETTSTTCCCSC--CE
T ss_pred EEEcCCCCcceeCC---HHHHHHHHHhCCCCEEEEecccccCCccc----ChhH-----CcEEEEecccccCCCCc--eE
Confidence 88899999999998 78899999999 99999999988654221 1111 2378899999998 677 57
Q ss_pred EEEeeCCCCCcchhhHHHHHHHHhh---------------------h-cCCCCchHHHHHHHHHhhchHHHHHHHHHHHH
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIFLN---------------------I-SSDPATFIQGAVPQILEKTEEEFFSKIIDILR 147 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~~~---------------------~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 147 (246)
++++++ ++++.+..... . ..+.+...+.++..++....+..+++.++.++
T Consensus 201 ~~~~~~--------~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 272 (362)
T 3ffr_A 201 VWILND--------RVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTE 272 (362)
T ss_dssp EEEEEH--------HHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EEEECH--------HHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 788888 88887776532 0 23567777777777776322333788888999
Q ss_pred HHHHHHHHHhhcCCCCccccC---CCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec-
Q 042445 148 ETADKCCDRLKEIPCITCPKK---PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV- 223 (246)
Q Consensus 148 ~~~~~l~~~L~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~- 223 (246)
++++.+.+.|+++||+..+.. +..+..+|+.++. +..++.. .|.++||.+.+|..+..++++|++++.
T Consensus 273 ~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~l~~~gi~~~~g~~~~~~~~iRis~~~~ 344 (362)
T 3ffr_A 273 EKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM-------LPGEINK-ILEPFDMAVGAGYGSKKETQIRIANFPA 344 (362)
T ss_dssp HHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-------CHHHHHH-HHGGGTEEEEECSGGGTTTEEEEECCTT
T ss_pred HHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC-------CHHHHHH-HHHHCCeEEecCccccCCCEEEEECCCC
Confidence 999999999999888774321 1246677777763 2455544 556669999999776668999999984
Q ss_pred -ChHHHHHHHHHHHHHH
Q 042445 224 -EPSALENGLGRMKAFY 239 (246)
Q Consensus 224 -~~~~l~~~~~~l~~~~ 239 (246)
++++++++++.|++++
T Consensus 345 ~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 345 HSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp SCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 7888888888887653
No 128
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.89 E-value=8.1e-23 Score=175.36 Aligned_cols=216 Identities=13% Similarity=0.106 Sum_probs=149.6
Q ss_pred hhhhhhh-ccc---cccCC-cCCCccC-CChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEc
Q 042445 2 ELINQDI-TRE---FSDFQ-VFHVGSG-FSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~-~~~---~~~~p-~NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
|.+++.+ .++ ++.+| +|+||.+ ++.+++++|.++|++||+++|+||+|.++...+..+ .....+...++ .
T Consensus 202 ~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~-~~~~~~~~~di---~ 277 (433)
T 1z7d_A 202 EALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDV---I 277 (433)
T ss_dssp HHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE---E
T ss_pred HHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch-hhHhcCCCCCE---E
Confidence 4556666 233 55566 4568975 788999999999999999999999999876655322 22222222223 3
Q ss_pred ccccccccCC-ceEEEEEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPG-LRLGWLVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 76 s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
|+||.++ +| +|+||+++++ ++++.+... ...+++.|+++++++.++|+...+ +...+.++++++.+
T Consensus 278 t~sK~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l 345 (433)
T 1z7d_A 278 LLGKALS-GGHYPISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPF 345 (433)
T ss_dssp EECGGGG-TTSSCCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHH
T ss_pred EECcccc-CCCCCeEEEEECH--------HHHhhhccccccccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHH
Confidence 8999987 79 9999999998 887776543 334457899999999888874222 23455666777777
Q ss_pred HHHhhcC----CCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHH
Q 042445 154 CDRLKEI----PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSA 227 (246)
Q Consensus 154 ~~~L~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~ 227 (246)
.+.|+++ +.+. . .+..|.++|++++... .+..++ ...|.++||.+.|+. .+++|++++. ++++
T Consensus 346 ~~~L~~l~~~~~~~~-~-~~~~g~~~~i~~~~~~----~~~~~~-~~~l~~~Gv~v~~~~----~~~iRi~~~~~~t~e~ 414 (433)
T 1z7d_A 346 LENLKRELKDSKIVR-D-VRGKGLLCAIEFKNEL----VNVLDI-CLKLKENGLITRDVH----DKTIRLTPPLCITKEQ 414 (433)
T ss_dssp HHHHHHHHTTCTTEE-E-EEEETTEEEEEECTTT----CCHHHH-HHHHHHTTEECCEET----TTEEEECCCTTCCHHH
T ss_pred HHHHHHHHHhCCCeE-E-EEeeeeEEEEEEccCh----hHHHHH-HHHHHHCCeEEecCC----CCEEEEECCcCCCHHH
Confidence 7777653 3222 1 2345778888886421 023444 455667899999863 6899998873 8999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 042445 228 LENGLGRMKAFYDRHAE 244 (246)
Q Consensus 228 l~~~~~~l~~~~~~~~~ 244 (246)
+++++++|.+++++...
T Consensus 415 i~~~l~~l~~~l~~~~~ 431 (433)
T 1z7d_A 415 LDECTEIIVKTVKFFDE 431 (433)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999887643
No 129
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.89 E-value=1.4e-22 Score=170.41 Aligned_cols=218 Identities=12% Similarity=0.017 Sum_probs=149.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++|+||||.+++ +++|.++|+++|++ |+||+|+... .+. .+.. .+..+++.|+
T Consensus 129 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~~g~---~~~-~~~~---~~~di~~~s~ 197 (382)
T 4eb5_A 129 SFIDQKLRDDTILVSVQHANNEIGTIQP---VEEISEVLAGKAAL-HIDATASVGQ---IEV-DVEK---IGADMLTISS 197 (382)
T ss_dssp HHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE-EEECTTTBTT---BCC-CHHH---HTCSEEEEET
T ss_pred HHHHHHhcCCCeEEEEeccCCCccccCC---HHHHHHHHHHCCCE-EEEcchhcCC---ccc-Cccc---cCCCEEEeeh
Confidence 4455555543 88999999999998 78999999999999 9999998321 111 1211 2345889999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHH-HHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSI-KIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDR 156 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (246)
||.++.+| +||+++++..... ...... ........+.+...+.++..++... ..++++.++.++++++.+.+.
T Consensus 198 sK~~g~~g--~G~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4eb5_A 198 NDIYGPKG--VGALWIRKEAKLQ---PVILGGGQENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp GGGTCCSS--CEEEEEETTCCCC---CSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCc--eEEEEEccccccC---ceecCCCccccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHH
Confidence 99977666 7999998731000 000000 0001112245666667666676632 346788889999999999999
Q ss_pred hhcCCCCccccCCCC---ceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC-------------------C
Q 042445 157 LKEIPCITCPKKPEG---SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------K 214 (246)
Q Consensus 157 L~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~ 214 (246)
|++++++.. ..|.+ +.+++++++.. +..++ .+.|.++||.+.+|..|.. +
T Consensus 272 L~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~-~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (382)
T 4eb5_A 272 VLKIEESYL-NGHPEKRLPNNVNVRFSYI------EGESI-VLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAH 343 (382)
T ss_dssp HTTSTTEEE-CSCSSSBCTTEEEEEETTS------CHHHH-HHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHT
T ss_pred HhhCCCeEE-eCCcccCCCCEEEEEeCCc------CHHHH-HHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccC
Confidence 998877763 34432 55677777521 24444 4556688999999876432 4
Q ss_pred CeEEEEeec--ChHHHHHHHHHHHHHHHHHhh
Q 042445 215 DWLRITFAV--EPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 215 ~~iRls~~~--~~~~l~~~~~~l~~~~~~~~~ 244 (246)
+++|++++. +++++++++++|.+++++..+
T Consensus 344 ~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 344 GTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 799999993 899999999999999887654
No 130
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.89 E-value=4.6e-22 Score=168.94 Aligned_cols=216 Identities=7% Similarity=-0.072 Sum_probs=155.0
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.+++ + ++++||||||.+.+ +++|.++|++||+++|+||+++..... . . +...+..+++.|
T Consensus 128 ~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~---~-~---~~~~~~d~~~~s 197 (411)
T 3nnk_A 128 DQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRRYDALFYTDATASLGGNP---L-E---TDVWGLDAVSAG 197 (411)
T ss_dssp HHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTTBTTBC---C-C---TTTTTCSEEECC
T ss_pred HHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHHcCCEEEEECCcccCCcc---c-c---hhccCCcEEEec
Confidence 455666653 2 88899999999988 678889999999999999998753221 1 1 112234588999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHh------------------------------------h-hcCCC
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFL------------------------------------N-ISSDP 119 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~------------------------------------~-~~~~~ 119 (246)
++|.+++ +.++||+++++ ++++.+.... . ...+.
T Consensus 198 ~~K~l~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (411)
T 3nnk_A 198 MQKCLGG-PSGTSPITLSA--------RMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTE 268 (411)
T ss_dssp STTTTCC-CSSEEEEEECH--------HHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCC
T ss_pred CccccCC-CCceEEEEECH--------HHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCC
Confidence 9997432 23589999998 8888876532 0 11245
Q ss_pred CchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC---CceEEEEEeccccccCCCChHHHHHH
Q 042445 120 ATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPE---GSMFVMVKLNYSLLEGINSDMEFALK 196 (246)
Q Consensus 120 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (246)
+...+.++..++....+..+++.++.++++++.+.+.|+++ ++.. ..+. .++++++.++... +..++...
T Consensus 269 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~ 341 (411)
T 3nnk_A 269 ATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-GLET-FGDLKHKMNNVLGVVIPQGI-----NGDQARKL 341 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB-CSCGGGBCSSEEEEECCTTC-----CHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEe-CCCcccccccEEEEECCCCC-----CHHHHHHH
Confidence 67777777777764223337888999999999999999987 6663 3333 3678888775332 35555555
Q ss_pred HHHhcCeEEecCCCcCCCCeEEEEe-ec--ChHHHHHHHHHHHHHHHHHh
Q 042445 197 LAKEESVIVLPGITVGLKDWLRITF-AV--EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 197 ll~~~gi~v~pg~~f~~~~~iRls~-~~--~~~~l~~~~~~l~~~~~~~~ 243 (246)
+++++||.+.||.....++++|+++ +. +++++++++++|++++++..
T Consensus 342 l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 342 MLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp HHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 5556699999986554578999998 53 78999999999999998654
No 131
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.89 E-value=1.9e-22 Score=172.07 Aligned_cols=212 Identities=13% Similarity=0.086 Sum_probs=149.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++|+||||.+++ +++|.++|++||+++|+||+|+..... ... ...+..+++.|+
T Consensus 154 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~----~~~---~~~~~di~~~s~ 223 (423)
T 3lvm_A 154 KELEAAMRDDTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKLP----IDL---SQLKVDLMSFSG 223 (423)
T ss_dssp HHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC----CCT---TTSCCSEEEEES
T ss_pred HHHHHhcCCCcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCC----cCh---hhcCCCEEEech
Confidence 4555656544 88899999999999 788999999999999999998753321 111 122345889999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHh--------hhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFL--------NISSDPATFIQGAVPQILEKTEEEFFSKIIDILRET 149 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 149 (246)
||.++.+| +||+++++ +..+.+.... ....+.+...+.++..++.. ...++++.++.++++
T Consensus 224 sK~~g~~g--~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~ 292 (423)
T 3lvm_A 224 HKIYGPKG--IGALYVRR--------KPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI-AKEEMATEMERLRGL 292 (423)
T ss_dssp TTTTSCSS--CEEEEECB--------TTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHhcCCCC--eEEEEEec--------cccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 99987777 89999987 4333333221 11225567777777677663 234488899999999
Q ss_pred HHHHHHHhhcCCCCccccCCCC---ceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC-------------
Q 042445 150 ADKCCDRLKEIPCITCPKKPEG---SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL------------- 213 (246)
Q Consensus 150 ~~~l~~~L~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------------- 213 (246)
++.+.+.|++++++..+ .+.+ +.++++.++.. +.+.+...|.+ |.+.+|..|..
T Consensus 293 ~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g 362 (423)
T 3lvm_A 293 RNRLWNGIKDIEEVYLN-GDLEHGAPNILNVSFNYV-------EGESLIMALKD--LAVSSGSACTSASLEPSYVLRALG 362 (423)
T ss_dssp HHHHHHHHTTSTTEEEE-SCSTTBCTTEEEEEETTS-------CHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEe-CCccccCCCeEEEEeCCC-------CHHHHHHHHhh--heeccCccccCCCccccHHHHHhC
Confidence 99999999988887743 3332 34555556432 33444555655 98999876543
Q ss_pred ------CCeEEEEeec--ChHHHHHHHHHHHHHHHHHhh
Q 042445 214 ------KDWLRITFAV--EPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 214 ------~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~~ 244 (246)
.+++|++++. ++++++++++.|.+++++..+
T Consensus 363 ~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 363 LNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp CCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 3899999994 789999999999999987654
No 132
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.89 E-value=1e-22 Score=175.44 Aligned_cols=207 Identities=14% Similarity=0.074 Sum_probs=145.4
Q ss_pred cccCCc-CCCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCC-ceE
Q 042445 12 FSDFQV-FHVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPG-LRL 88 (246)
Q Consensus 12 ~~~~p~-NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-~r~ 88 (246)
++++|+ ||||. +.+.+++++|.++|++||+++|+||+|.++...+..+ .+..++...+++ |+||.+++ | +|+
T Consensus 223 vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~~di~---s~sK~l~~-G~~~~ 297 (449)
T 3a8u_X 223 VFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMF-GADSFGVTPDLM---CIAKQVTN-GAIPM 297 (449)
T ss_dssp EEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGGT-TSSCC
T ss_pred EEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcch-hhhhcCCCCCEE---EEcccccC-CCCce
Confidence 666675 57996 6679999999999999999999999998776554322 222222222333 89999874 7 999
Q ss_pred EEEEeeCCCCCcchhhHHHHHHHH----------hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 042445 89 GWLVTSDPNGILQDSGIVDSIKIF----------LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLK 158 (246)
Q Consensus 89 G~i~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 158 (246)
||+++++ ++++.+... ...+++.|++++.++.++++...+ +...+.++++++.+.+.|+
T Consensus 298 G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~l~~~L~ 366 (449)
T 3a8u_X 298 GAVIAST--------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK---ENLVQSVAEVAPHFEKALH 366 (449)
T ss_dssp EEEEEEH--------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHH
T ss_pred EEEEECH--------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence 9999988 888888753 123447799999998888874222 2456667777888888887
Q ss_pred cCCCCccc-cCCCCceEEEEEeccccccCCC--ChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHH
Q 042445 159 EIPCITCP-KKPEGSMFVMVKLNYSLLEGIN--SDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLG 233 (246)
Q Consensus 159 ~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~ 233 (246)
+++.+..+ ..+..|+++|++++.... .. +..++ ...|.++||.+.|+. +++|+++. .++++++++++
T Consensus 367 ~l~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~-~~~l~~~Gv~v~~~g-----~~iRis~~~~~t~~~i~~~l~ 438 (449)
T 3a8u_X 367 GIKGAKNVIDIRNFGLAGAIQIAPRDG--DAIVRPFEA-GMALWKAGFYVRFGG-----DTLQFGPTFNSKPQDLDRLFD 438 (449)
T ss_dssp TTTTSTTEEEEEEETTEEEEEECCBTT--BSSHHHHHH-HHHHHHHTEECEEET-----TEEEECCCTTCCHHHHHHHHH
T ss_pred HHhcCCCeEEEeeeEEEEEEEEecCcc--cccccHHHH-HHHHHHCCcEEecCC-----CEEEEECCCcCCHHHHHHHHH
Confidence 65322211 123457889988864310 00 01134 445557899999962 78999965 49999999999
Q ss_pred HHHHHHHHH
Q 042445 234 RMKAFYDRH 242 (246)
Q Consensus 234 ~l~~~~~~~ 242 (246)
+|.+++++.
T Consensus 439 ~l~~~l~~~ 447 (449)
T 3a8u_X 439 AVGEVLNKL 447 (449)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 999998764
No 133
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=3.4e-22 Score=168.59 Aligned_cols=210 Identities=13% Similarity=0.004 Sum_probs=144.9
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCC-cc------ccccCCcc
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPF-VS------MGVFGSIV 69 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~-~~------~~~~~~~~ 69 (246)
+.+++.+++ + ++++|+||||.+.+ +++|.++|++||+++|+||+|+.+.++..+. .. ...+.. +
T Consensus 161 ~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 236 (397)
T 3f9t_A 161 KFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-G 236 (397)
T ss_dssp HHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-T
T ss_pred HHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-c
Confidence 455565655 3 78899999999976 8889999999999999999999765432110 00 111112 3
Q ss_pred cEEEEcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhc---------C---CCCchHHHHHHHHHhhchHH
Q 042445 70 PLLTLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNIS---------S---DPATFIQGAVPQILEKTEEE 137 (246)
Q Consensus 70 ~~i~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~---------~---~~~~~~q~~~~~~l~~~~~~ 137 (246)
..+++.|++|. +++|.|+||+++++. .+.+.+....... . +.+...+.++...+. ..
T Consensus 237 ~~~~~~s~~K~-~~~~~~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~ 305 (397)
T 3f9t_A 237 VDSITIDPHKM-GHCPIPSGGILFKDI-------GYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG---RE 305 (397)
T ss_dssp CSEEECCTTTT-TCCCSSCEEEEESSG-------GGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH---HH
T ss_pred CCeEEEccccc-cCCCCCceEEEEeCH-------HHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh---HH
Confidence 45888999997 567789999999773 3444332221111 0 123445555544443 45
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeE
Q 042445 138 FFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWL 217 (246)
Q Consensus 138 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~i 217 (246)
.+++..+.++++++.+.+.|+++ ++.. ..+..+.+++++++. . +.+.+.|.++||.+.++.. ++++
T Consensus 306 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~--------~-~~~~~~l~~~gi~v~~~~~---~~~~ 371 (397)
T 3f9t_A 306 GQRKIVNECMENTLYLYKKLKEN-NFKP-VIEPILNIVAIEDED--------Y-KEVCKKLRDRGIYVSVCNC---VKAL 371 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCCB-SSCCSSSEEEEECTT--------H-HHHHHHHHHTTCBCEECSS---SSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCEE-EcCCCccEEEEEeCC--------H-HHHHHHHHhCCeEEeccCC---CCEE
Confidence 57777888889999999999988 7763 344556667766542 3 3445566778999999764 6899
Q ss_pred EEEeec--ChHHHHHHHHHHHHHHH
Q 042445 218 RITFAV--EPSALENGLGRMKAFYD 240 (246)
Q Consensus 218 Rls~~~--~~~~l~~~~~~l~~~~~ 240 (246)
|++++. +++++++++++|.++++
T Consensus 372 Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 372 RIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred EEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 999994 89999999999998764
No 134
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.89 E-value=1.8e-22 Score=173.86 Aligned_cols=211 Identities=15% Similarity=0.057 Sum_probs=143.2
Q ss_pred cccCC-c-CCCc-cCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCC-ce
Q 042445 12 FSDFQ-V-FHVG-SGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPG-LR 87 (246)
Q Consensus 12 ~~~~p-~-NPtG-~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-~r 87 (246)
+++.| + ||+| .+++.+++++|.++|++||+++|+||+|.++...+..+ ....++-... +.+|||.+++ | +|
T Consensus 214 vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~d---i~t~sK~l~~-G~~~ 288 (448)
T 3dod_A 214 LSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQPD---LMAAGKGITG-GYLP 288 (448)
T ss_dssp EEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS---EEEECGGGGT-TSSC
T ss_pred EEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCCC---EEEecccccC-CcCc
Confidence 55555 3 6676 56678889999999999999999999999887666433 2222222222 4478999865 8 59
Q ss_pred EEEEEeeCCCCCcchhhHHHHHHH-------H-hhhcCCCCchHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhh
Q 042445 88 LGWLVTSDPNGILQDSGIVDSIKI-------F-LNISSDPATFIQGAVPQILEKTE-EEFFSKIIDILRETADKCCDRLK 158 (246)
Q Consensus 88 ~G~i~~~~~~~~~~~~~~~~~l~~-------~-~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~ 158 (246)
+||+++++ ++++.+.. . ...+++.|+++++++.++|+... +..+++.++..+..++.+.+ ++
T Consensus 289 ig~v~~~~--------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~-l~ 359 (448)
T 3dod_A 289 IAVTFATE--------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD-LH 359 (448)
T ss_dssp CEEEEEEH--------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-HT
T ss_pred eEEEEECH--------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-Hh
Confidence 99999998 88888865 2 23445889999999999998432 23344444444444555555 55
Q ss_pred cCCCCccccCCCCceEEEEEeccccc--cCCCCh---HHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHH
Q 042445 159 EIPCITCPKKPEGSMFVMVKLNYSLL--EGINSD---MEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENG 231 (246)
Q Consensus 159 ~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~---~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~ 231 (246)
+++.+.. .+..|.++|+.+....- ...... ...+...+.++||.+.|+ .+++|+++. .++++++++
T Consensus 360 ~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----~~~iRi~~~~~~t~e~i~~~ 432 (448)
T 3dod_A 360 ALPHVGD--IRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPL-----GDVIAFLPPLASTAEELSEM 432 (448)
T ss_dssp TSTTEEE--EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE-----TTEEEECCCTTCCHHHHHHH
T ss_pred cCCCeEE--EEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEecc-----CCEEEEECCCCCCHHHHHHH
Confidence 5543331 22346788887764310 000000 233455566889999986 279999765 499999999
Q ss_pred HHHHHHHHHHHh
Q 042445 232 LGRMKAFYDRHA 243 (246)
Q Consensus 232 ~~~l~~~~~~~~ 243 (246)
+++|.+++++..
T Consensus 433 l~~l~~~l~~~~ 444 (448)
T 3dod_A 433 VAIMKQAIHEVT 444 (448)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 135
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.89 E-value=1.7e-22 Score=175.24 Aligned_cols=210 Identities=18% Similarity=0.159 Sum_probs=145.4
Q ss_pred cccCCcCCCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCcccc-ccCCcccEEEEcccccccccCC-ceE
Q 042445 12 FSDFQVFHVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMG-VFGSIVPLLTLGSISKRGIVPG-LRL 88 (246)
Q Consensus 12 ~~~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~g-~r~ 88 (246)
+++.++|++|. +++++++++|.++|++||+++|+||+|.++...|..+ ... .++-..+++ ++||.+++ | +|+
T Consensus 226 i~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~-~~~~~~~v~pdi~---t~sK~l~~-G~~pl 300 (476)
T 3i5t_A 226 LAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF-ASEKVFGVVPDII---TFAKGVTS-GYVPL 300 (476)
T ss_dssp EECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHTTCCCCSEE---EECGGGGT-TSSCC
T ss_pred EECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce-eeecccCCCcchh---hhhhhhcC-CCcCe
Confidence 55555667775 8899999999999999999999999999987776432 222 232222333 68899865 8 999
Q ss_pred EEEEeeCCCCCcchhhHHHHHHHH--------hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 042445 89 GWLVTSDPNGILQDSGIVDSIKIF--------LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEI 160 (246)
Q Consensus 89 G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 160 (246)
|++++++ ++++.+... ...+++.|+++++++.++|+...+ +...+.++++.+.+.+.|+++
T Consensus 301 g~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l 369 (476)
T 3i5t_A 301 GGLAISE--------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---EGIVDQAREMADYFAAALASL 369 (476)
T ss_dssp EEEEECH--------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEECH--------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHH
Confidence 9999988 888888653 224558899999999999984322 334555666666666666653
Q ss_pred ---CCCccccCCCCceEEEEEeccccc--cCCCC---hHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHH
Q 042445 161 ---PCITCPKKPEGSMFVMVKLNYSLL--EGINS---DMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEN 230 (246)
Q Consensus 161 ---~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~---~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~ 230 (246)
+.+. .+. ..|.++++++..... ..... ....+...+.++||.+.|.. +++||++. .+++++++
T Consensus 370 ~~~~~v~-~v~-~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~l~~t~e~i~~ 442 (476)
T 3i5t_A 370 RDLPGVA-ETR-SVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-----DLCVISPPLIISRAQIDE 442 (476)
T ss_dssp TTSTTEE-EEE-EETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHHHH
T ss_pred hcCCCeE-EEE-ecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC-----CEEEEECCCCCCHHHHHH
Confidence 3333 223 345666777754210 00000 13345556678899999832 89999955 59999999
Q ss_pred HHHHHHHHHHHHhh
Q 042445 231 GLGRMKAFYDRHAE 244 (246)
Q Consensus 231 ~~~~l~~~~~~~~~ 244 (246)
++++|.+++++..+
T Consensus 443 ~l~~l~~~l~~~~~ 456 (476)
T 3i5t_A 443 MVAIMRQAITEVSA 456 (476)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987664
No 136
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.89 E-value=4.7e-23 Score=176.55 Aligned_cols=207 Identities=12% Similarity=0.040 Sum_probs=141.3
Q ss_pred cccCCcCC-Ccc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFH-VGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NP-tG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++|+|| +|. ..+.+++++|.++|++||+++|+||+|.++ ..+..+ ....++.. ..+.||||.|++ |+|+|
T Consensus 204 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~---~di~t~sK~~~~-G~~iG 277 (429)
T 3k28_A 204 VIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNC-GQGYYGVT---PDLTCLGKVIGG-GLPVG 277 (429)
T ss_dssp EEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTH-HHHHHTCC---CSEEEECGGGGT-TSCCE
T ss_pred EEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-HHHHhCCC---CceehhhhhhcC-CCCeE
Confidence 55666554 444 446788999999999999999999999988 554322 22222222 224579999864 99999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH----hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc----CC
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF----LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKE----IP 161 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~ 161 (246)
|+++++ ++++.+... ...+++.|++++.++.++++... ++..+.++++++.+.+.|++ .+
T Consensus 278 ~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~ 345 (429)
T 3k28_A 278 AYGGKA--------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAAEKHG 345 (429)
T ss_dssp EEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcH--------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 999988 888877542 22344789999999999998543 45556666666666666654 33
Q ss_pred CCccccCCCCceEEEEEeccccccC-----CC--ChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHH
Q 042445 162 CITCPKKPEGSMFVMVKLNYSLLEG-----IN--SDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGR 234 (246)
Q Consensus 162 ~~~~~~~~~~g~~~~~~~~~~~~~~-----~~--~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~ 234 (246)
.+. . .+..|.++++.+......+ .+ .....+.+.+.++||.+.|+. .+.+|+++..+++++++++++
T Consensus 346 ~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~r~~~~~t~e~i~~~l~~ 419 (429)
T 3k28_A 346 IPH-H-INRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQ----FEGLFLSTVHSDADIEATIAA 419 (429)
T ss_dssp CCC-E-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST----TSCBCCCTTCCHHHHHHHHHH
T ss_pred CCE-E-EEeeccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCC----CCCEEEECCCCHHHHHHHHHH
Confidence 332 2 2344666666664321000 00 012444556778999999874 467899887799999999999
Q ss_pred HHHHHHHH
Q 042445 235 MKAFYDRH 242 (246)
Q Consensus 235 l~~~~~~~ 242 (246)
|.+++++.
T Consensus 420 l~~~l~~~ 427 (429)
T 3k28_A 420 AEIAMSKL 427 (429)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 99998765
No 137
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.89 E-value=6.5e-22 Score=166.07 Aligned_cols=218 Identities=13% Similarity=0.024 Sum_probs=147.6
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++||||||.+.+ +++|.++|++||+ +|+|++|+..... ..+. ..+..+++.|+
T Consensus 129 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~~~~~----~~~~---~~~~d~~~~s~ 197 (382)
T 4hvk_A 129 SFIDQKLRDDTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHIDATASVGQIE----VDVE---KIGADMLTISS 197 (382)
T ss_dssp HHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEEECTTTBTTBC----CCHH---HHTCSEEEEES
T ss_pred HHHHHHhccCceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEEEhHHhcCCCC----CCch---hcCCCEEEEeH
Confidence 4556666544 88999999999988 7789999999999 9999998743221 1111 11245889999
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDR 156 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (246)
||.+|.+| +|++++++..... ........... .....+...+.++..++.. ...++++.++.++++++.+.+.
T Consensus 198 ~K~~g~~g--~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4hvk_A 198 NDIYGPKG--VGALWIRKEAKLQ---PVILGGGQENGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp GGGTSCTT--CEEEEEETTCCCC---CSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCc--eEEEEEcCccCcC---cccccCCCcCccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHH
Confidence 99877666 7888887631000 00000000001 1224567777777777763 3467889999999999999999
Q ss_pred hhcCCCCccccCCCC---ceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC-------------------C
Q 042445 157 LKEIPCITCPKKPEG---SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------K 214 (246)
Q Consensus 157 L~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~ 214 (246)
|++++++.. ..+.+ +.++++.++.. +.+.+.+.|.++||.+.+|..|.. +
T Consensus 272 L~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (382)
T 4hvk_A 272 VLKIEESYL-NGHPEKRLPNNVNVRFSYI-------EGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAH 343 (382)
T ss_dssp HTTSTTEEE-CSCSSSBCTTEEEEEETTC-------CHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHH
T ss_pred HhcCCCeEE-eCCccccCCCEEEEEECCC-------CHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcC
Confidence 999888764 33332 34666666432 334455677888999999977653 4
Q ss_pred CeEEEEeec--ChHHHHHHHHHHHHHHHHHhh
Q 042445 215 DWLRITFAV--EPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 215 ~~iRls~~~--~~~~l~~~~~~l~~~~~~~~~ 244 (246)
+++|++++. ++++++++++.|++++++..+
T Consensus 344 ~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 344 GTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 789999994 789999999999999987654
No 138
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.89 E-value=2.7e-22 Score=173.23 Aligned_cols=204 Identities=11% Similarity=0.072 Sum_probs=144.3
Q ss_pred cccC-CcCCCccCC-ChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDF-QVFHVGSGF-SGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~-p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
+++. ++||+|.++ +.+++++|.++|++||+++|+||+|.++...+..+ ....++...+++ ||||.+++..+|+|
T Consensus 238 i~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~~~~~~~pdii---t~sK~l~gG~~~lG 313 (457)
T 3tfu_A 238 VVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AADHAGVSPDIM---CVGKALTGGYLSLA 313 (457)
T ss_dssp EECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGTTSSCCE
T ss_pred EEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-HhHhcCCCceEE---EEChhhhCCCcceE
Confidence 4545 589999876 77889999999999999999999999987666432 222333222333 89998754337999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH------hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC---
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF------LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEI--- 160 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 160 (246)
|+++++ ++++.+... ...+++.|+++++++.++|+...+ +...+.++++.+.+.+.|+++
T Consensus 314 ~v~~~~--------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~ 382 (457)
T 3tfu_A 314 ATLCTA--------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRITELAAGLTAGLDTARAL 382 (457)
T ss_dssp EEEEEH--------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHHHHGGGGGS
T ss_pred EEEEcH--------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999998 999988521 223458899999999998874221 234455566666667666653
Q ss_pred CCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHHHHHH
Q 042445 161 PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGRMKAF 238 (246)
Q Consensus 161 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~l~~~ 238 (246)
+++.. + +..|++++++++... +...+.+.|.++||.+.|. .+++|+++. .+++++++++++|+++
T Consensus 383 ~~v~~-v-r~~G~~~~i~l~~~~------~~~~~~~~l~~~Gv~v~~~-----~~~lRi~p~~~~t~eei~~~l~~L~~~ 449 (457)
T 3tfu_A 383 PAVTD-V-RVCGAIGVIECDRPV------DLAVATPAALDRGVWLRPF-----RNLVYAMPPYICTPAEITQITSAMVEV 449 (457)
T ss_dssp TTEEE-E-EECSSCEEEEESSCC------CHHHHHHHHHHTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CCeee-e-ecCCeEEEEEECCcc------cHHHHHHHHHHCCeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 34432 2 234678888886432 3344455666789999873 378999866 3899999999999999
Q ss_pred HHHHh
Q 042445 239 YDRHA 243 (246)
Q Consensus 239 ~~~~~ 243 (246)
+++..
T Consensus 450 l~~~~ 454 (457)
T 3tfu_A 450 ARLVG 454 (457)
T ss_dssp HHHC-
T ss_pred HHHhc
Confidence 98654
No 139
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.88 E-value=1.1e-23 Score=176.57 Aligned_cols=196 Identities=13% Similarity=0.109 Sum_probs=141.9
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++|+||||.+++ +++|.++|++||+++|+||+|+.+... . .+..++ ..+++.|+||.+++++ |+||+
T Consensus 152 ~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~---~-~~~~~~---~di~~~s~sK~~~~~~-~~G~~ 220 (371)
T 2e7j_A 152 LITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP---V-SLKEIG---ADFIVGSGHKSMAASG-PIGVM 220 (371)
T ss_dssp EEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC---C-CHHHHT---CSEEEEEHHHHSSCCS-SCEEE
T ss_pred EEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC---C-ChhhcC---CCEEEecCCcCCCCCC-CcEEE
Confidence 88999999999998 689999999999999999999986532 1 222222 3489999999877654 99999
Q ss_pred EeeCCCCCcchhhHHHH-HHHHhh---h-----cCCCCchHHHHHHHHHhhchHHHHHHHHHHH--HHHHHHHHHHhhcC
Q 042445 92 VTSDPNGILQDSGIVDS-IKIFLN---I-----SSDPATFIQGAVPQILEKTEEEFFSKIIDIL--RETADKCCDRLKEI 160 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~-l~~~~~---~-----~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~ 160 (246)
++++ ++++. +..... . ....++..+.++..+++.... +..+.+ +++++.+.+.|+++
T Consensus 221 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~ 288 (371)
T 2e7j_A 221 GMKE--------EWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL 288 (371)
T ss_dssp EECT--------TTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT
T ss_pred EEec--------hhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc
Confidence 9998 55555 443321 1 224566666666666653111 566677 88889999999887
Q ss_pred CCCccccCCC--CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC------CCeEE-EEee---cChHHH
Q 042445 161 PCITCPKKPE--GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL------KDWLR-ITFA---VEPSAL 228 (246)
Q Consensus 161 ~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~iR-ls~~---~~~~~l 228 (246)
++.. ..|. .+.++|++++ . ..++ .+.|.++||.+.| ..+.. ++++| ++++ .+++++
T Consensus 289 -~~~~-~~~~~~~~~~~~~~~~-~-------~~~~-~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i 356 (371)
T 2e7j_A 289 -GIKQ-LGDNPHNHDLMFFHAE-V-------LYEI-SKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEV 356 (371)
T ss_dssp -TCEE-ESSSSCCSSEEEEECH-H-------HHHH-HHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHH
T ss_pred -CcEE-ecCCCccCceEEEECC-C-------HHHH-HHHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHH
Confidence 6663 3343 4668888775 1 3444 4556689999988 44322 68999 9999 589999
Q ss_pred HHHHHHHHHHHHHH
Q 042445 229 ENGLGRMKAFYDRH 242 (246)
Q Consensus 229 ~~~~~~l~~~~~~~ 242 (246)
++++++|.++++++
T Consensus 357 ~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 357 DYVLNAFKEIIEKY 370 (371)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998754
No 140
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.88 E-value=3.5e-22 Score=171.67 Aligned_cols=215 Identities=11% Similarity=0.059 Sum_probs=151.6
Q ss_pred hhhhhhhc-cc---cccCCc-CCCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEc
Q 042445 2 ELINQDIT-RE---FSDFQV-FHVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~-~~---~~~~p~-NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
|.+++.++ ++ ++.+|+ ||+|. +++.+++++|.++|++||+++|+||+|.++...+..+ .....+...++ .
T Consensus 213 ~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di---~ 288 (439)
T 2oat_A 213 PALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDI---V 288 (439)
T ss_dssp HHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE---E
T ss_pred HHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcE---E
Confidence 45555553 32 555664 56896 5789999999999999999999999998876655332 22222222233 2
Q ss_pred ccccccccCC-ceEEEEEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPG-LRLGWLVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 76 s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
|+||.++ +| +|+||+++++ ++++.+... ...+++.|++++.++.++++...+ +...+.++++++.+
T Consensus 289 t~sK~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l 356 (439)
T 2oat_A 289 LLGKALS-GGLYPVSAVLCDD--------DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIIL 356 (439)
T ss_dssp EECGGGG-TTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHH
T ss_pred Eeccccc-CCCCCeEEEEECH--------HHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHH
Confidence 8999987 58 9999999998 887776543 334557899999999888874222 24567788888999
Q ss_pred HHHhhcCCCCccc-cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHH
Q 042445 154 CDRLKEIPCITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEN 230 (246)
Q Consensus 154 ~~~L~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~ 230 (246)
.+.|+++ ++..+ ..+..|.+++++++... + .+..++ ...|.++||.+.|+. ++++|+++. .+++++++
T Consensus 357 ~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~--~-~~~~~l-~~~l~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~ 427 (439)
T 2oat_A 357 RNELMKL-PSDVVTAVRGKGLLNAIVIKETK--D-WDAWKV-CLRLRDNGLLAKPTH----GDIIRFAPPLVIKEDELRE 427 (439)
T ss_dssp HHHHTTS-CTTTEEEEEEETTEEEEEECCCS--S-CCHHHH-HHHHHHTTEECCBSS----SSEEEECCCTTCCHHHHHH
T ss_pred HHHHHHh-cCCCcEEEEeeeeEEEEEEecCc--c-HHHHHH-HHHHHHCCeEEecCC----CCEEEEECccCCCHHHHHH
Confidence 9999886 33211 12345778888886431 0 123444 445667899999853 689999876 48999999
Q ss_pred HHHHHHHHHHH
Q 042445 231 GLGRMKAFYDR 241 (246)
Q Consensus 231 ~~~~l~~~~~~ 241 (246)
++++|.+++++
T Consensus 428 ~l~~l~~~l~~ 438 (439)
T 2oat_A 428 SIEIINKTILS 438 (439)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 141
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.88 E-value=2e-22 Score=168.35 Aligned_cols=205 Identities=14% Similarity=0.053 Sum_probs=144.6
Q ss_pred hhhhh-hhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQ-DITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~-~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
+.+++ .++++ ++++||||||.+++ ++. ++||+++|+||+|+.+... ..+..+ + +++.|
T Consensus 131 ~~l~~~~i~~~~k~v~~~~~~nptG~~~~--~i~------~~~~~~li~D~a~~~~~~~----~~~~~~---d--i~~~s 193 (360)
T 1w23_A 131 PDFSEFQLNENDAYLHITSNNTIYGTQYQ--NFP------EINHAPLIADMSSDILSRP----LKVNQF---G--MIYAG 193 (360)
T ss_dssp CCGGGCCCCTTEEEEEEESEETTTTEECS--SCC------CCCSSCEEEECTTTTTSSC----CCGGGC---S--EEEEE
T ss_pred cchHhhccCCCCCEEEEeCCCCCcceecc--ccc------ccCCceEEEechhhcCCCC----cCcccC---C--EEEEE
Confidence 34555 55443 78899999999987 232 2799999999999875422 122222 2 78999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHh------------hh-cCCCCchHHHHHHHHHhhchHH-HHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFL------------NI-SSDPATFIQGAVPQILEKTEEE-FFSKI 142 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~------------~~-~~~~~~~~q~~~~~~l~~~~~~-~~~~~ 142 (246)
+||.|+++| +||+++++ ++++.+.... .. ..+.+...+.++..+++...+. ++++.
T Consensus 194 ~sK~~~~~G--~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 263 (360)
T 1w23_A 194 AQKNLGPSG--VTVVIVKK--------DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAI 263 (360)
T ss_dssp TTTTTSCTT--CEEEEEEH--------HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred cccccCCCC--cEEEEEcH--------HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 999998777 99999998 7665553321 01 1245666667777777642233 67888
Q ss_pred HHHHHHHHHHHHHHhhcCCCC-ccccCC--CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEE
Q 042445 143 IDILRETADKCCDRLKEIPCI-TCPKKP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRI 219 (246)
Q Consensus 143 ~~~~~~~~~~l~~~L~~~~~~-~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRl 219 (246)
++.++++++.+.+.|++++++ ..+..| .+++++|++++... +...+.+.|.++||.+.||..+ ++++|+
T Consensus 264 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~gi~~~~~~~~--~~~iRi 335 (360)
T 1w23_A 264 AKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEE------LNQQFLAKAKEQGFVGLNGHRS--VGGCRA 335 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHH------HHHHHHHHHHHTTEESCBCCTT--TCSEEE
T ss_pred HHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCCc------cHHHHHHHHHHCCeeeecCCCC--CCeEEE
Confidence 999999999999999988655 322123 34668998876421 2333444577899999988754 689999
Q ss_pred Eeec--ChHHHHHHHHHHHHHHHH
Q 042445 220 TFAV--EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 220 s~~~--~~~~l~~~~~~l~~~~~~ 241 (246)
+++. +++++++++++|++++++
T Consensus 336 s~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 336 SIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHHHhh
Confidence 9994 889999999999988754
No 142
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.88 E-value=3.9e-22 Score=166.20 Aligned_cols=202 Identities=10% Similarity=0.079 Sum_probs=135.2
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCccc--CCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAF--GNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++||| ||.++|.+++++|.++|++||+++|+|++|..+.. .+.....+ .+.....++ +.|+||. +++ ...|
T Consensus 146 ~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d~~-~~s~sK~-g~~-~G~g 220 (356)
T 1v72_A 146 SITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVDAL-SFGATKN-GVL-AAEA 220 (356)
T ss_dssp EEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCCEE-EECCGGG-TCS-SCEE
T ss_pred EEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCCEE-EEecccC-CCc-CccE
Confidence 7778865 99999999999999999999999999999986432 22111111 111122344 4589998 442 2234
Q ss_pred EEEeeCCCCCcchhhHHHHHHHHhhhcCCCCc---hHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIFLNISSDPAT---FIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCP 166 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 166 (246)
|+++++ ++++.+..........+. ..+..+...+.+ ....+..+.++++++.+.+.|++++++. +
T Consensus 221 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~ 288 (356)
T 1v72_A 221 IVLFNT--------SLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTD---DLWLRNARKANAAAQRLAQGLEGLGGVE-V 288 (356)
T ss_dssp EEESSG--------GGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHTTCTTEE-E
T ss_pred EEEECH--------HHHhhHHHHhhccCchhhhHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhCCCcE-E
Confidence 888876 777777654322212222 222223334432 2233456667888899999998877876 3
Q ss_pred cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHHh
Q 042445 167 KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~ 243 (246)
..|.+++++|++++ . ++ .+.|.++||.+.||. |+ ++++|+++.. +++++++++++|++++++..
T Consensus 289 ~~~~~~~~~~~~~~---------~-~~-~~~l~~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 354 (356)
T 1v72_A 289 LGGTEANILFCRLD---------S-AM-IDALLKAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRTQ 354 (356)
T ss_dssp ESCCCSSEEEEEEC---------H-HH-HHHHHHTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC----
T ss_pred ccCCCccEEEEEcC---------H-HH-HHHHHhcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence 46788899998764 1 34 444568899999987 55 7899999874 88999999999999887653
No 143
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.88 E-value=2.3e-21 Score=164.85 Aligned_cols=214 Identities=12% Similarity=0.036 Sum_probs=153.1
Q ss_pred hhhhhhhc-cc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDIT-RE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~-~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.++ .+ ++++||||||.+.+ +++|.++|++||+++|+|++|+.....- . +...+..+++.|
T Consensus 126 ~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~----~---~~~~~~d~~~~s 195 (416)
T 3isl_A 126 EDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATIGGCEV----K---VDEWKIDAAIGG 195 (416)
T ss_dssp HHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTTTTSCC----C---TTTTTCSEEECC
T ss_pred HHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCccccCCCc----c---hhhcCCCEEEec
Confidence 45566565 23 88899999999988 7889999999999999999987433211 1 111234588999
Q ss_pred cccc-cccCCceEEEEEeeCCCCCcchhhHHHHHHHHh--------------------------------------hh-c
Q 042445 77 ISKR-GIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFL--------------------------------------NI-S 116 (246)
Q Consensus 77 ~sK~-~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~--------------------------------------~~-~ 116 (246)
++|. ++.+ ++|++++++ ++++.+.... .. .
T Consensus 196 ~~K~l~g~~--g~g~~~~~~--------~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 265 (416)
T 3isl_A 196 TQKCLSVPS--GMAPITYNE--------RVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNH 265 (416)
T ss_dssp SSSTTCCCS--SEEEEEECH--------HHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCS
T ss_pred CccccCCCC--CeEEEEECH--------HHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCC
Confidence 9996 4444 589999988 8887776321 11 2
Q ss_pred CCCCchHHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHHhhcCCCCccccCCCC---ceEEEEEeccccccCCCChHH
Q 042445 117 SDPATFIQGAVPQILEKTEEEF-FSKIIDILRETADKCCDRLKEIPCITCPKKPEG---SMFVMVKLNYSLLEGINSDME 192 (246)
Q Consensus 117 ~~~~~~~q~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~ 192 (246)
.+.+...+.++..++... ..+ +++.++.++++++.+.+.|+++ ++.. ..+.+ ++++++.++... +..+
T Consensus 266 ~~~~~~~~~a~~~al~~~-~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~ 337 (416)
T 3isl_A 266 HTEATTMLYALREGVRLV-LEEGLETRFERHRHHEAALAAGIKAM-GLRL-FGDDSCKMPVVTCVEIPGGI-----DGES 337 (416)
T ss_dssp SCCCHHHHHHHHHHHHHH-HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB-CSCGGGBCTTEEEEECCTTC-----CHHH
T ss_pred CCCCHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHc-CCEe-ccCccccCCcEEEEeCCCCC-----CHHH
Confidence 245677777777777642 334 8889999999999999999986 6663 34433 677787775322 3555
Q ss_pred HHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHH-HHHHHHHHHHHHHHHh
Q 042445 193 FALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSA-LENGLGRMKAFYDRHA 243 (246)
Q Consensus 193 ~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~-l~~~~~~l~~~~~~~~ 243 (246)
+...+++++||.+.+|.....++++|+++.. ++++ +++++++|+++++++.
T Consensus 338 l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 338 VRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp HHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 6555555569999998865558999999942 5555 9999999999988653
No 144
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.88 E-value=2e-21 Score=164.91 Aligned_cols=202 Identities=13% Similarity=0.103 Sum_probs=135.8
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++|+||||.+++ +++|.++|++||+++|+||+|..+.+.. +. .+ +..+++.|+
T Consensus 140 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~---~~di~~~s~ 208 (398)
T 2rfv_A 140 EEIRAAMRPETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QL---GADIVVHSV 208 (398)
T ss_dssp HHHHHHCCTTEEEEEEESSBTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEET
T ss_pred HHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh---CCcEEEEeC
Confidence 4455555543 88899999999997 8999999999999999999999776532 11 12 356899999
Q ss_pred ccccccCCceE-EEEEeeCCCCCcchhhHHH-HHHHHhh-h-cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRL-GWLVTSDPNGILQDSGIVD-SIKIFLN-I-SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 78 sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~-~l~~~~~-~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
||.|+++|+|+ ||+++++ ++++ .++.... . +.+.+++.+.++.+.++. +....+...++.+.+
T Consensus 209 sK~~~~~g~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l 275 (398)
T 2rfv_A 209 TKYINGHGDVIGGIIVGKQ--------EFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRMERHCENALKI 275 (398)
T ss_dssp TTTTTCSSCCCCEEEEECH--------HHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHH
T ss_pred cccccCCCCceEEEEEECH--------HHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHH
Confidence 99999999999 9999998 7776 5665433 3 347889999999888874 233334455666777
Q ss_pred HHHhhcCC--------------CCccccCC---CCceEEEEEeccccccCCCChHHHHHHHHHh---cCeEEecCCCcC-
Q 042445 154 CDRLKEIP--------------CITCPKKP---EGSMFVMVKLNYSLLEGINSDMEFALKLAKE---ESVIVLPGITVG- 212 (246)
Q Consensus 154 ~~~L~~~~--------------~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~---~gi~v~pg~~f~- 212 (246)
.+.|++.+ ++.. ..| ..|.+++++++.. .+....++.+ .|+.+.+|..|.
T Consensus 276 ~~~l~~~~~v~~~~~~~L~~~p~~~~-~~~~~~~~g~~~~~~~~~~--------~~~~~~l~~~~~~~~i~~~~G~~~~l 346 (398)
T 2rfv_A 276 ARFLEGHPSITRVYYPGLSSHPQYEL-GQRQMSLPGGIISFEIAGG--------LEAGRRMINSVELCLLAVSLGDTETL 346 (398)
T ss_dssp HHHHHTCTTEEEEECTTSTTSTTHHH-HHHHCSSCCSEEEEEETTH--------HHHHHHHHTTCSSSEECSCCSSSSCE
T ss_pred HHHHHcCCCeeEEECCCCCCCccHHH-HHhhCCCCceEEEEEEcCC--------HHHHHHHHHhCCcceeccCCCCccee
Confidence 77776542 2221 111 2355556577631 1223334433 478888875531
Q ss_pred ---------------------C-CCeEEEEeec--ChHHHHHHHHHHH
Q 042445 213 ---------------------L-KDWLRITFAV--EPSALENGLGRMK 236 (246)
Q Consensus 213 ---------------------~-~~~iRls~~~--~~~~l~~~~~~l~ 236 (246)
. ++++|+|++. ++++++.+.+.|.
T Consensus 347 i~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 394 (398)
T 2rfv_A 347 IQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIR 394 (398)
T ss_dssp EECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred eecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 1 5899999996 3444444444443
No 145
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.88 E-value=1.1e-21 Score=164.89 Aligned_cols=213 Identities=13% Similarity=0.061 Sum_probs=143.8
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.+.++ ++++||||||.+++ +++|.++|++||+++|+|++|+.+...- . +...+..+++.|+
T Consensus 135 ~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~---~~~~~~d~~~~s~ 204 (376)
T 3f0h_A 135 EKLYEYDNQNFTGLLVNVDETSTAVLYD---TMMIGEFCKKNNMFFVCDCVSAFLADPF----N---MNECGADVMITGS 204 (376)
T ss_dssp HHHHTTTTSCCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSCC----C---HHHHTCSEEEEET
T ss_pred HHHHHhhccCceEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEEcCccccCccc----c---ccccCccEEEecC
Confidence 3455555443 88889999999999 9999999999999999999988654321 1 1112234888999
Q ss_pred ccccc-cCCceEEEEEeeCCCCCcchhhHHHHHHHHhh------------------hcCCCCchHHHHHHHHHhhchHH-
Q 042445 78 SKRGI-VPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN------------------ISSDPATFIQGAVPQILEKTEEE- 137 (246)
Q Consensus 78 sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~------------------~~~~~~~~~q~~~~~~l~~~~~~- 137 (246)
+|.++ ++| +|++++++ ++++.+..... ...+++...+.++..++....+.
T Consensus 205 ~K~l~~~~G--~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~ 274 (376)
T 3f0h_A 205 QKVLACPPG--ISVIVLAP--------RGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHG 274 (376)
T ss_dssp TTTTCCCSS--CEEEEECH--------HHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTT
T ss_pred cccccCCCc--eEEEEECH--------HHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhc
Confidence 99987 566 67888888 88887764210 01133333335555555532233
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeE
Q 042445 138 FFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWL 217 (246)
Q Consensus 138 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~i 217 (246)
.+++.++.++++++.+.+.|+++ ++.. ..+.....++...+... +..++...+.+++||.+.||.....++++
T Consensus 275 ~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~~~~~~~~~-----~~~~l~~~l~~~~gi~v~~g~~~~~~~~l 347 (376)
T 3f0h_A 275 GADAEVARIASQAADFRAKIKDL-PFEL-VSESPANGVTSVHPTTA-----NAYDIFLKLKDEYGIWICPNGGEMKDTIF 347 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTS-SEEE-CCSSBBTTEEEEEESSS-----CHHHHHHHHHHHSSEECEECCGGGTTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc-CCcc-CccccCceEEEEeCCCC-----CHHHHHHHHHHhCCEEEecCccccCCCEE
Confidence 57888888999999999999887 4542 23332222222122211 34555555554459999998544457899
Q ss_pred EEEeec--ChHHHHHHHHHHHHHHHH
Q 042445 218 RITFAV--EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 218 Rls~~~--~~~~l~~~~~~l~~~~~~ 241 (246)
|+++.. +++++++++++|++++++
T Consensus 348 Ris~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 348 RVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp EEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 999973 899999999999998864
No 146
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.88 E-value=5.9e-22 Score=171.70 Aligned_cols=210 Identities=16% Similarity=0.103 Sum_probs=141.8
Q ss_pred cccCC-cCCCccC-CChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQ-VFHVGSG-FSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p-~NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++.+| +|++|.+ ++++++++|.++|++||+++|+||+|.++...|..+ ....++...++ .+|||.++..|+|+|
T Consensus 227 vi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~-a~~~~~v~pdi---~t~sK~l~gg~~plG 302 (472)
T 3hmu_A 227 FIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWF-GTQTMGIRPHI---MTIAKGLSSGYAPIG 302 (472)
T ss_dssp EEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCCSE---EEECGGGTTTSSCCE
T ss_pred EEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccc-hhHHhCCCCce---eeechhhhcCCcceE
Confidence 55555 4556654 488999999999999999999999999987666422 22223322233 368899877779999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH---hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHH-HHHHHHHHHhhc---CCC
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF---LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILR-ETADKCCDRLKE---IPC 162 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~L~~---~~~ 162 (246)
|+++++ ++++.+... ...+++.|+++++++.++|+...+ +...+.++ ++.+.+.+.|++ ++.
T Consensus 303 ~v~~~~--------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~~l~~~L~~l~~~~~ 371 (472)
T 3hmu_A 303 GSIVCD--------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHVRNVAAPYLKEKWEALTDHPL 371 (472)
T ss_dssp EEEEEH--------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHTHHHHHHHHHHGGGGSTT
T ss_pred EEEECH--------HHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999998 999988321 223558899999999999974322 23344445 555555555544 444
Q ss_pred CccccCCCCceEEEEEeccccc--cCC----CChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHH
Q 042445 163 ITCPKKPEGSMFVMVKLNYSLL--EGI----NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGR 234 (246)
Q Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~--~~~----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~ 234 (246)
+.. +.+ .|.++++.+..... ... ......+.+.|.++||.+.|+. +++||++. .+++++++++++
T Consensus 372 v~~-vr~-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~~~~t~e~i~~~l~~ 444 (472)
T 3hmu_A 372 VGE-AKI-VGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG-----DRMIISPPLVITPAEIDEMFVR 444 (472)
T ss_dssp EEE-EEE-ETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-----TEEEECCCTTCCHHHHHHHHHH
T ss_pred eEE-EEe-cCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC-----CEEEEECCCCCCHHHHHHHHHH
Confidence 432 333 45666666653210 000 0013445566778899999863 89999955 499999999999
Q ss_pred HHHHHHHHh
Q 042445 235 MKAFYDRHA 243 (246)
Q Consensus 235 l~~~~~~~~ 243 (246)
|.+++++..
T Consensus 445 l~~~l~~~~ 453 (472)
T 3hmu_A 445 IRKSLDEAQ 453 (472)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987754
No 147
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.88 E-value=1e-21 Score=166.66 Aligned_cols=200 Identities=11% Similarity=0.036 Sum_probs=144.3
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++||||||.+++.+++.++ +|+++|+|++|+.+... . .+. +..+++.|+||.++++| ++||+
T Consensus 170 ~~~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~~~---~-~~~-----~~di~~~s~sK~~~~~g-g~g~l 233 (398)
T 2fyf_A 170 AWAHNETSTGVAVAVRRPEGS------DDALVVIDATSGAGGLP---V-DIA-----ETDAYYFAPQKNFASDG-GLWLA 233 (398)
T ss_dssp EEESEETTTTEECCCCCCTTC------C-CEEEEECTTTTTTSC---C-CGG-----GCSEEEECTTSTTCSCS-SEEEE
T ss_pred EEeCcCCCcceecchHHhhhh------cCCeEEEEeccccCCcc---c-Ccc-----cCcEEEEecCcccCCCC-ceEEE
Confidence 678999999999998877765 89999999999865422 1 111 12378899999998886 59999
Q ss_pred EeeCCCCCcchhhHHHHHHHHh---------------------hh-cCCCCchHHHHHHHHHhhchHH-HHHHHHHHHHH
Q 042445 92 VTSDPNGILQDSGIVDSIKIFL---------------------NI-SSDPATFIQGAVPQILEKTEEE-FFSKIIDILRE 148 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~---------------------~~-~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~ 148 (246)
++++ ++++.++... .. ..+.+...+.++..+++...+. ++++.++.+++
T Consensus 234 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 305 (398)
T 2fyf_A 234 IMSP--------AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTAD 305 (398)
T ss_dssp EECH--------HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred EECH--------HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 9988 8887774320 11 1245666777777777642222 27888999999
Q ss_pred HHHHHHHHhhcCCCCcccc-CC--CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--
Q 042445 149 TADKCCDRLKEIPCITCPK-KP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV-- 223 (246)
Q Consensus 149 ~~~~l~~~L~~~~~~~~~~-~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~-- 223 (246)
+++.+.+.|++++++..+. .| .+++++|++++... +..++ .+.|.++||.+.+|.....++++|++++.
T Consensus 306 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l-~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~ 379 (398)
T 2fyf_A 306 SSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDV-----DAGTV-AKILRANGIVDTEPYRKLGRNQLRVAMFPAV 379 (398)
T ss_dssp HHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTS-----CHHHH-HHHHHHTTCBCCSCCTTTCSSEEEEECCTTS
T ss_pred HHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCC-----CHHHH-HHHHHHCCcEEecCcccCCCCEEEEEecCCC
Confidence 9999999999887776432 24 34558998886421 34454 44566779999987432226899999994
Q ss_pred ChHHHHHHHHHHHHHHHH
Q 042445 224 EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 224 ~~~~l~~~~~~l~~~~~~ 241 (246)
+++++++++++|++++++
T Consensus 380 t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 380 EPDDVSALTECVDWVVER 397 (398)
T ss_dssp CHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 899999999999988764
No 148
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.88 E-value=2.5e-22 Score=167.01 Aligned_cols=201 Identities=15% Similarity=0.123 Sum_probs=132.5
Q ss_pred cccCCcCCC-ccCCChhhHHHHHHHHHHcCCEEEEccccCCcc--cCCCCCccccccCCcccEEEEcccccccccCCceE
Q 042445 12 FSDFQVFHV-GSGFSGSFVSPIAETAKKLGIMVIANEVYGHLA--FGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRL 88 (246)
Q Consensus 12 ~~~~p~NPt-G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~ 88 (246)
++++||||| |.+++.+++++|+++|+++|+++|+|++|..+. +.+.....+. ...+ . ++.|+||.++++ +
T Consensus 137 ~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d-~-~~~s~sK~l~~~---~ 209 (347)
T 1jg8_A 137 AIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYA--GYAD-S-VMFCLSKGLCAP---V 209 (347)
T ss_dssp EEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH--HTCS-E-EEEESSSTTCCS---S
T ss_pred EEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc--cccc-E-EEEecccccCCC---c
Confidence 789999999 999999999999999999999999999875321 2221111111 1122 2 334799998754 5
Q ss_pred EE-EEeeCCCCCcchhhHHHHHHHHhhhc-CC--CCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 042445 89 GW-LVTSDPNGILQDSGIVDSIKIFLNIS-SD--PATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCIT 164 (246)
Q Consensus 89 G~-i~~~~~~~~~~~~~~~~~l~~~~~~~-~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 164 (246)
|| +++++ ++++.+......+ .+ .+.+.+.++...++.. .+..++ ..++++.+.+.|+++ ++.
T Consensus 210 G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~-~~~~~~~l~~~L~~~-~~~ 275 (347)
T 1jg8_A 210 GSVVVGDR--------DFIERARKARKMLGGGMRQAGVLAAAGIIALTKM----VDRLKE-DHENARFLALKLKEI-GYS 275 (347)
T ss_dssp CEEEEECH--------HHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHS----STTHHH-HHHHHHHHHHHHHHH-TCB
T ss_pred eEEEEcCH--------HHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH----HHHHHH-HHHHHHHHHHHHHhc-Cce
Confidence 75 55565 7888776654322 12 2444555555555431 112222 235667888888777 555
Q ss_pred cccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 165 CPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 165 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
....+..++++|++++... .+..++.. .|.++||.+.|+. .+++|+++.. +++++++++++|.++++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~l~~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 276 VNPEDVKTNMVILRTDNLK----VNAHGFIE-ALRNSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp CCGGGCCSSEEEEECTTSS----SCHHHHHH-HHHHHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred eccCCCcceEEEEEccccc----CCHHHHHH-HHHHCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 2223456778998886311 13455544 4568899999854 5789999864 8999999999999988654
No 149
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.88 E-value=1.8e-21 Score=168.07 Aligned_cols=212 Identities=13% Similarity=0.079 Sum_probs=139.8
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++||||||.+++ +++|.++|++||+++|+||+|..... ..++. .+..+++.|+
T Consensus 208 ~~l~~~i~~~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~g~~----~~~~~----~~~div~~S~ 276 (464)
T 1ibj_A 208 DEVAAAIGPQTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVL----SRPLE----LGADIVMHSA 276 (464)
T ss_dssp HHHHHHCCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTT----CCGGG----TTCSEEEEET
T ss_pred HHHHHHhccCceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCccccc----CChhh----cCCEEEEECC
Confidence 4566666554 88999999999996 89999999999999999999985321 11221 2467999999
Q ss_pred ccccccC-CceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH-
Q 042445 78 SKRGIVP-GLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC- 154 (246)
Q Consensus 78 sK~~~~~-g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~- 154 (246)
||.|+++ |+|+||+++++. ++++.+..... .+.+++++.+.++.+.+... ...+++..+......+.+.
T Consensus 277 sK~~~g~~Gl~~G~l~~~~~-------~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~-~~r~~~~~~~~~~l~~~l~~ 348 (464)
T 1ibj_A 277 TKFIAGHSDVMAGVLAVKGE-------KLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTM-ALRIEKQQENARKIAMYLSS 348 (464)
T ss_dssp TTTTTCSSCCCCEEEEECSH-------HHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCCCCcEEEEEEChH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhchhhH-HHHHHHHHHHHHHHHHHHHh
Confidence 9988764 899999999852 67777776643 34467889999888888742 2222222222222222221
Q ss_pred ---------HHhhcCCCCccccCCC---CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCC------------C
Q 042445 155 ---------DRLKEIPCITCPKKPE---GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI------------T 210 (246)
Q Consensus 155 ---------~~L~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~------------~ 210 (246)
+.|+++|++.. ..+. .|.+++++++.. +..+.+.+.|+..||.+.+|. +
T Consensus 349 ~~~v~~~~~~~L~~~p~~~~-~~~~~~g~g~~~~~~l~~~------~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~ 421 (464)
T 1ibj_A 349 HPRVKKVYYAGLPDHPGHHL-HFSQAKGAGSVFSFITGSV------ALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH 421 (464)
T ss_dssp CTTCCEEECTTSTTSTTHHH-HTTTCSCCCSEEEEECSCH------HHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTT
T ss_pred CCCceEEECCCCCCCcchHH-HhccCCCCceEEEEEECCH------HHHHHHHHhcCcceEeecCCCCceeeeccccccc
Confidence 22333344432 2332 356777777421 123334445666788888875 1
Q ss_pred c----------CC-CCeEEEEeecChHHHHHHHHHHHHHHHH
Q 042445 211 V----------GL-KDWLRITFAVEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 211 f----------~~-~~~iRls~~~~~~~l~~~~~~l~~~~~~ 241 (246)
+ +. ++++|+|++. +++++++++|++++++
T Consensus 422 ~~~~~~~~~~~g~~~~~iRlsvg~--edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 422 ASIPAEVREARGLTEDLVRISAGI--EDVDDLISDLDIAFKT 461 (464)
T ss_dssp CSCCSSSSSSSSCCTTCEEEECCS--SCHHHHHHHHHHHHHS
T ss_pred ccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHhh
Confidence 2 12 5799999998 7789999999998864
No 150
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.88 E-value=1.5e-21 Score=164.38 Aligned_cols=209 Identities=17% Similarity=0.182 Sum_probs=148.4
Q ss_pred hhhhhhhcc-c----cccCCcCCCccCCChhhHHHHHHHHHHc--CCEEEEccccCCcccCCCCCccccccCCcccEEEE
Q 042445 2 ELINQDITR-E----FSDFQVFHVGSGFSGSFVSPIAETAKKL--GIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTL 74 (246)
Q Consensus 2 e~~~~~~~~-~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~--~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~ 74 (246)
|.+++.+++ + ++++|+||||.+++ +++|.++|++| |+++|+||+|+.... +. .+ ...+..+++
T Consensus 127 ~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~~---~~-~~---~~~~~d~~~ 196 (385)
T 2bkw_A 127 ELITEKLSQNSYGAVTVTHVDTSTAVLSD---LKAISQAIKQTSPETFFVVDAVCSIGCE---EF-EF---DEWGVDFAL 196 (385)
T ss_dssp HHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTSEEEEECTTTTTTS---CC-CT---TTTTCSEEE
T ss_pred HHHHHHHhcCCCCEEEEEccCCCcCeEcC---HHHHHHHHHhhCCCCEEEEECccccCCc---cc-cc---cccCceEEE
Confidence 445555544 2 88899999999998 77999999999 999999999974321 11 12 222345888
Q ss_pred cccccccc-cCCceEEEEEeeCCCCCcchhhHHH-HHH------------------HH-hhh-------cCCCCchHHHH
Q 042445 75 GSISKRGI-VPGLRLGWLVTSDPNGILQDSGIVD-SIK------------------IF-LNI-------SSDPATFIQGA 126 (246)
Q Consensus 75 ~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~-~l~------------------~~-~~~-------~~~~~~~~q~~ 126 (246)
.|++|.++ .+| +||+++++ ++++ .++ .. ... ..+.+...+.+
T Consensus 197 ~s~~K~~~~~~G--~G~~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 266 (385)
T 2bkw_A 197 TASQKAIGAPAG--LSISLCSS--------RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINS 266 (385)
T ss_dssp EESSSTTCCCSC--EEEEEECH--------HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHH
T ss_pred ecCccccccCCc--ceEEEEcH--------HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHH
Confidence 99999654 567 49999987 6666 431 11 011 12567777777
Q ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHHHHh-hcCCCCccccCC-----CCceEEEEEeccccccCCCChHHHHHHHHHh
Q 042445 127 VPQILEKTEEEFFSKIIDILRETADKCCDRL-KEIPCITCPKKP-----EGSMFVMVKLNYSLLEGINSDMEFALKLAKE 200 (246)
Q Consensus 127 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 200 (246)
+..+++...+..+++.++.++++++.+.+.| +++ ++.. ..+ ..++++|++++. ..++ .+.|.+
T Consensus 267 ~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~l~~ 335 (385)
T 2bkw_A 267 LDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL-QLTS-VSRYPSNMSAHGLTAVYVAD--------PPDV-IAFLKS 335 (385)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCEE-SSCSSSTTBCSSCEEEECSC--------HHHH-HHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc-Ccee-cccCcccccCCceEEEecCC--------HHHH-HHHHHH
Confidence 7777764222337778888999999999999 887 6663 322 257888887752 3344 445668
Q ss_pred cCeEEecCCCcCC-CCeEEEE-ee-----cChHHHHHHHHHHHHHHHH
Q 042445 201 ESVIVLPGITVGL-KDWLRIT-FA-----VEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 201 ~gi~v~pg~~f~~-~~~iRls-~~-----~~~~~l~~~~~~l~~~~~~ 241 (246)
+||.+.+|..+.. .+++|++ ++ .+++++++++++|++++++
T Consensus 336 ~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 336 HGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp TTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred CCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 9999999887543 6899999 76 3889999999999988754
No 151
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.87 E-value=8.5e-21 Score=160.33 Aligned_cols=209 Identities=14% Similarity=0.175 Sum_probs=145.2
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+.. +. ..+..+++.|+
T Consensus 128 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~----~~~~di~~~s~ 196 (386)
T 1cs1_A 128 QALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN----PL----ALGADLVLHSC 196 (386)
T ss_dssp HHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG----GGTCSEEEEET
T ss_pred HHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----cc----ccCceEEEEcC
Confidence 3455555543 88899999999986 8999999999999999999999876541 11 12356899999
Q ss_pred ccccccCCceE-EEEEeeCCCCCcchhhHHHHHHHHhhh-cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRL-GWLVTSDPNGILQDSGIVDSIKIFLNI-SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 78 sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
||.++++|.|+ ||+++++. ++++.+...... +...+++.++++...++. +....+.+.++++.+.+
T Consensus 197 sK~~~~~~~~~~G~~~~~~~-------~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~ 264 (386)
T 1cs1_A 197 TKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----LVPRMELAQRNAQAIVK 264 (386)
T ss_dssp TTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-----HHHHHHHHHHHHHHHHH
Confidence 99999999997 99999762 677877765433 335788888877666652 45556667788888888
Q ss_pred HhhcCCCCccccCC----------------CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCC---------
Q 042445 156 RLKEIPCITCPKKP----------------EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT--------- 210 (246)
Q Consensus 156 ~L~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~--------- 210 (246)
.|++++.+..+..+ ..|.++.+.++. ..+.+...+.++||.+.+.+.
T Consensus 265 ~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~gi~~~~~~~g~~~sl~~~ 336 (386)
T 1cs1_A 265 YLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG--------DEQTLRRFLGGLSLFTLAESLGGVESLISH 336 (386)
T ss_dssp HHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--------CHHHHHHHHHTCSSSEEBSCCCSSSCEEEE
T ss_pred HHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC--------CHHHHHHHHHhCCcceEcccCCCcceeeec
Confidence 88776543321111 124555555642 234556778889998874211
Q ss_pred ------c----------CC-CCeEEEEeecChHHHHHHHHHHHHHHHHHh
Q 042445 211 ------V----------GL-KDWLRITFAVEPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 211 ------f----------~~-~~~iRls~~~~~~~l~~~~~~l~~~~~~~~ 243 (246)
+ +. ++++|+|++. ++.++.+++|.+++++..
T Consensus 337 ~~~~~~~~~~~~~~~~~g~~~~~iRis~~~--~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 337 AATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRAAN 384 (386)
T ss_dssp GGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHT
T ss_pred ccccccccCCHHHHHhcCCCCCeEEEEEcc--CCHHHHHHHHHHHHHHhh
Confidence 0 11 5899999997 345666777777776543
No 152
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.87 E-value=3.3e-22 Score=171.52 Aligned_cols=211 Identities=12% Similarity=0.048 Sum_probs=143.1
Q ss_pred cccCCc-CCCccCC-ChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQV-FHVGSGF-SGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~-NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++.+|+ ||||.++ +.+++++|.++|++||+++|+||+|+++ ..+.. .....++...+ +.||||.+++ |+|+|
T Consensus 207 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK~l~~-G~~~G 280 (434)
T 2epj_A 207 VIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE-GAQGYFNIEGD---IIVLGKIIGG-GFPVG 280 (434)
T ss_dssp EEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT-HHHHHHTCCCS---EEEEEGGGGT-TSSCE
T ss_pred EEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc-hhhHHhCCCCC---eeeecchhcC-Cccee
Confidence 666664 5799866 7999999999999999999999999987 33322 12222221112 3589999876 99999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH----hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC---C
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF----LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIP---C 162 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~ 162 (246)
|+++++ ++++.+... ...+++.|+++++++.++|+...+ ++..+.++++++.+.+.|+++. +
T Consensus 281 ~v~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~ 349 (434)
T 2epj_A 281 AVAGSR--------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEVLDRTG 349 (434)
T ss_dssp EEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeecH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 999998 888777552 122347899999999888874221 3455666677777777776531 2
Q ss_pred CccccCCCCceEEEEEeccccccC-------CCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHH
Q 042445 163 ITCPKKPEGSMFVMVKLNYSLLEG-------INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRM 235 (246)
Q Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l 235 (246)
+... .+..|.++|+.++.....+ .......+...|.++||.+.|+.. .++|+++..+++++++++++|
T Consensus 350 ~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~e~i~~~l~~l 424 (434)
T 2epj_A 350 LPYT-INRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL----EAVFTGLPHQGEALEIAVEGL 424 (434)
T ss_dssp CCEE-EEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCSHHHHHHHHHHH
T ss_pred CcEE-EEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC----CcEEEeccCCHHHHHHHHHHH
Confidence 3211 2345778888886410000 000233445556689999999752 457777667999999999999
Q ss_pred HHHHHHHhh
Q 042445 236 KAFYDRHAE 244 (246)
Q Consensus 236 ~~~~~~~~~ 244 (246)
.+++++...
T Consensus 425 ~~~l~~~~~ 433 (434)
T 2epj_A 425 RSSLKTVLG 433 (434)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999987643
No 153
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.87 E-value=2.4e-21 Score=164.43 Aligned_cols=207 Identities=8% Similarity=0.058 Sum_probs=145.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++|+||||.+++ +++|.++|+++|+++|+|++|..... +. .+..+ +..+++.|+
T Consensus 156 ~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~---~~-~~~~~---~~d~~~~s~ 225 (406)
T 3cai_A 156 WQWESLISKSTRLVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYR---LL-DIRET---DADVVTVNA 225 (406)
T ss_dssp GGHHHHCCTTEEEEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTC---CC-CHHHH---CCSEEEEEG
T ss_pred HHHHHHhCCCceEEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCCC---CC-Cchhc---CCCEEEeeh
Confidence 4556666543 88999999999998 78899999999999999999984321 11 12222 345889999
Q ss_pred ccccccCCceEE-EEEeeCCCCCcchhhHHHHHHHHhh---------h-cCCCCchHHHHHHHHHhhchH----------
Q 042445 78 SKRGIVPGLRLG-WLVTSDPNGILQDSGIVDSIKIFLN---------I-SSDPATFIQGAVPQILEKTEE---------- 136 (246)
Q Consensus 78 sK~~~~~g~r~G-~i~~~~~~~~~~~~~~~~~l~~~~~---------~-~~~~~~~~q~~~~~~l~~~~~---------- 136 (246)
||.+| ++ +| |+++++ ++++.++.... + ..+.+...+.++..+++....
T Consensus 226 ~K~~g-~~--~G~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~ 294 (406)
T 3cai_A 226 HAWGG-PP--IGAMVFRDP--------SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRR 294 (406)
T ss_dssp GGGTS-CS--CEEEEESCH--------HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHH
T ss_pred hhhcC-CC--cCeEEEEeh--------HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchh
Confidence 99864 54 89 999987 77776654321 1 224566666565555542111
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC--CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCC-
Q 042445 137 ----EFFSKIIDILRETADKCCDRLKEIPCITCPKKPE--GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI- 209 (246)
Q Consensus 137 ----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~- 209 (246)
.++++.++.++++++.+.+.|++++++.. ..|. .+.++++.++.. +..+ +.+.|.++||.+.+|.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~-~~~~L~~~gi~v~~g~~ 366 (406)
T 3cai_A 295 ERLAVSMQSADAYLNRVFDYLMVSLRSLPLVML-IGRPEAQIPVVSFAVHKV------PADR-VVQRLADNGILAIANTG 366 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEE-CCCCSSBCSEEEEEETTB------CHHH-HHHHHHHTTEECEECCS
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEE-cCCccccCCEEEEEECCc------CHHH-HHHHHHHCCcEEecCCh
Confidence 15788889999999999999999877763 3442 133677777531 2444 4555678999999987
Q ss_pred -----CcCC---CCeEEEEeec--ChHHHHHHHHHHHH
Q 042445 210 -----TVGL---KDWLRITFAV--EPSALENGLGRMKA 237 (246)
Q Consensus 210 -----~f~~---~~~iRls~~~--~~~~l~~~~~~l~~ 237 (246)
.|+. .+++|++++. +++++++++++|++
T Consensus 367 ~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 367 SRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp CHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 3332 4899999996 78899999988864
No 154
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.87 E-value=4.2e-22 Score=170.63 Aligned_cols=210 Identities=11% Similarity=0.040 Sum_probs=136.9
Q ss_pred cccCCcCCCccCC--ChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVGSGF--SGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~--~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++|+||+|-++ +++++++|.++|++||+++|+||+|.++ ..+..+ ....++...+ +.|+||.++ +|+|+|
T Consensus 204 vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~-~~~~~~~~pd---i~t~sK~~~-~G~~~G 277 (429)
T 4e77_A 204 IIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAG-AQDYYHVIPD---LTCLGKIIG-GGMPVG 277 (429)
T ss_dssp EEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTC-HHHHTTCCCS---EEEEEGGGG-TTSCCE
T ss_pred EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcch-HHHhcCCCCC---eeeeccccc-CCCCeE
Confidence 7788877766443 3456999999999999999999999988 544322 2222222222 358999987 799999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH----hhhcCCCCchHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF----LNISSDPATFIQGAVPQILEKTE-EEFFSKIIDILRETADKCCDRLKEIPCIT 164 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 164 (246)
|+++++ ++++.+... ...+++.|++++.++.++|+... +.+.++.++.....++.+.+.+.+.+ +.
T Consensus 278 ~~~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~ 348 (429)
T 4e77_A 278 AFGGRR--------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEEN-IP 348 (429)
T ss_dssp EEEECH--------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-CC
T ss_pred EEEECH--------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-Cc
Confidence 999988 888877652 22344789999999999887432 23333333333333333443333443 22
Q ss_pred cccCCCCceEEEEEecccc-ccC-------CCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHHH
Q 042445 165 CPKKPEGSMFVMVKLNYSL-LEG-------INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRMK 236 (246)
Q Consensus 165 ~~~~~~~g~~~~~~~~~~~-~~~-------~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l~ 236 (246)
...+..|+++++.++... ..+ .......+.+.|.++||.+.|+. ...+|+++..+++++++++++|.
T Consensus 349 -~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~ 423 (429)
T 4e77_A 349 -LVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSA----FEAGFMSLAHSNEDIQKTVNAAR 423 (429)
T ss_dssp -CEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSST----TSCEECCTTCCHHHHHHHHHHHH
T ss_pred -eEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecC----CCCEEEeccCCHHHHHHHHHHHH
Confidence 223456888888876431 000 00012344555668899999875 34567776679999999999999
Q ss_pred HHHHH
Q 042445 237 AFYDR 241 (246)
Q Consensus 237 ~~~~~ 241 (246)
+++++
T Consensus 424 ~~l~~ 428 (429)
T 4e77_A 424 RCFAK 428 (429)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 98754
No 155
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.87 E-value=2.5e-22 Score=171.72 Aligned_cols=206 Identities=15% Similarity=0.069 Sum_probs=139.6
Q ss_pred cccCCcCC-CccCC-ChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFH-VGSGF-SGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NP-tG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++|+|| ||.++ +.+++++|.++ ++||+++|+||+|+++ ..+.. .....++...+ +.||||.+++ |+|+|
T Consensus 203 vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK~l~~-G~~~G 275 (424)
T 2e7u_A 203 IIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPD---LVTLGKILGG-GLPAA 275 (424)
T ss_dssp EEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCS---EEEECGGGGT-TSSCE
T ss_pred EEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcc---hhhhhhhhhC-CcceE
Confidence 77788776 89765 78999999999 9999999999999987 43322 22222222222 3389999974 99999
Q ss_pred EEEeeCCCCCcchhhHHHHHHHH----hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC---CC
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIF----LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEI---PC 162 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~ 162 (246)
|+++++ ++++.+... ...+++.|++++.++.++++...+ .++..+.++++++.+.+.|+++ .+
T Consensus 276 ~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~ 345 (424)
T 2e7u_A 276 AYAGRR--------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEVLKEKG 345 (424)
T ss_dssp EEEECH--------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcH--------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 888877652 122347899999999888874222 2445666777777777777653 13
Q ss_pred CccccCCCCceEEEEEeccccccC-------CCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHH
Q 042445 163 ITCPKKPEGSMFVMVKLNYSLLEG-------INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRM 235 (246)
Q Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l 235 (246)
+... .+..|.++|++++.....+ .......+.+.|.++||.+.|+.. .++|+++..+++++++++++|
T Consensus 346 ~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~~~i~~~l~~l 420 (424)
T 2e7u_A 346 LPHT-VNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF----EAAFLSVAHREEDVEKTLEAL 420 (424)
T ss_dssp CCCE-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS----SCEECCTTCCHHHHHHHHHHH
T ss_pred CceE-EEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC----CceEeeccCCHHHHHHHHHHH
Confidence 3211 2345678898886410000 000233344556689999999752 457777667999999999999
Q ss_pred HHHH
Q 042445 236 KAFY 239 (246)
Q Consensus 236 ~~~~ 239 (246)
.+++
T Consensus 421 ~~~l 424 (424)
T 2e7u_A 421 RKAL 424 (424)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 8753
No 156
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.87 E-value=3.3e-22 Score=171.13 Aligned_cols=207 Identities=13% Similarity=0.027 Sum_probs=134.2
Q ss_pred cccCCcCCCccCCC-hhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFS-GSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~-~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
+++.++|++|.+.+ .+++++|.++|++||+++|+||+|.++ ..+..+ .....+.. ..+.|+||.++ +|+|+||
T Consensus 204 i~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~---~di~t~sK~~~-~G~~~G~ 277 (427)
T 3fq8_A 204 ILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGG-VQEKFGVT---PDLTTLGKIIG-GGLPVGA 277 (427)
T ss_dssp EECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTH-HHHHTTCC---CSEEEECGGGG-TTSSCEE
T ss_pred EEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-hhHhcCCC---CChhhhhhhhh-CCcceEE
Confidence 44444556676665 566999999999999999999999988 554322 22222211 12568999987 7999999
Q ss_pred EEeeCCCCCcchhhHHHHHHHH----hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh----cCCC
Q 042445 91 LVTSDPNGILQDSGIVDSIKIF----LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLK----EIPC 162 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~ 162 (246)
+++++ ++++.+... ...+++.|+++++++.++++...+ +...+.++++.+.+.+.|+ +.+
T Consensus 278 ~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~- 345 (427)
T 3fq8_A 278 YGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIAQETG- 345 (427)
T ss_dssp EEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred EEEcH--------HHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 99988 888877642 223346799999999998874321 1233334444444444443 332
Q ss_pred CccccCCCCceEEEEEecccccc-----CCCC--hHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHH
Q 042445 163 ITCPKKPEGSMFVMVKLNYSLLE-----GINS--DMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRM 235 (246)
Q Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~-----~~~~--~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l 235 (246)
+. ...+..|+++++.+...... ...+ ....+.+.+.++||.+.|+.. .++|+++..+++++++++++|
T Consensus 346 ~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~----~r~~~~~~~t~e~i~~~l~~l 420 (427)
T 3fq8_A 346 HA-ACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF----EAGFTSLAHTEEDIDATLAAA 420 (427)
T ss_dssp CC-CEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCCHHHHHHHHHHH
T ss_pred CC-eEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC----CCEEeeCcCCHHHHHHHHHHH
Confidence 22 12334578888877542110 0000 123455567788999998763 355666556999999999999
Q ss_pred HHHHHH
Q 042445 236 KAFYDR 241 (246)
Q Consensus 236 ~~~~~~ 241 (246)
.+++++
T Consensus 421 ~~~l~~ 426 (427)
T 3fq8_A 421 RTVMSA 426 (427)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999865
No 157
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.87 E-value=3.2e-21 Score=166.24 Aligned_cols=213 Identities=18% Similarity=0.133 Sum_probs=137.4
Q ss_pred cccCCcC-CCccCCChhhHHHHHHHHHHcCCEEEEccccCC----------cccCCCCCcccc-ccCCcccEEEEccccc
Q 042445 12 FSDFQVF-HVGSGFSGSFVSPIAETAKKLGIMVIANEVYGH----------LAFGNTPFVSMG-VFGSIVPLLTLGSISK 79 (246)
Q Consensus 12 ~~~~p~N-PtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~----------~~~~~~~~~~~~-~~~~~~~~i~~~s~sK 79 (246)
++++||| |||.+++.+++++|.++|++||+++|+||+|.. +.+.+..+.++. .++...+++++ |++|
T Consensus 179 ~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk 257 (456)
T 2ez2_A 179 CLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKK 257 (456)
T ss_dssp EEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTT
T ss_pred EEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCcc
Confidence 7788999 999999999999999999999999999999986 345443221110 11122245555 6788
Q ss_pred ccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhc------CCCCchHHHH-HHHHHhhchHHHH-HHHHHHHHHHHH
Q 042445 80 RGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNIS------SDPATFIQGA-VPQILEKTEEEFF-SKIIDILRETAD 151 (246)
Q Consensus 80 ~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~q~~-~~~~l~~~~~~~~-~~~~~~~~~~~~ 151 (246)
. +++| +.||+++++. ++++.+....... .+.++....+ +...++ .+ ++..+..+++.+
T Consensus 258 ~-~~~~-~gG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~-----~~~~~~~~~~~~~~~ 323 (456)
T 2ez2_A 258 D-CLVN-IGGFLCMNDD-------EMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLRE-----AMQYEYIEHRVKQVR 323 (456)
T ss_dssp T-TCCS-SCEEEEESCH-------HHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHH-----HTCHHHHHHHHHHHH
T ss_pred c-CCCC-ceeEEEECCH-------HHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHH-----HhHHHHHHHHHHHHH
Confidence 7 5567 7899998432 7888776543221 1233333222 222222 12 233344455566
Q ss_pred HHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHH-----HHHHHHhcCeEEec-CCCc------------CC
Q 042445 152 KCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEF-----ALKLAKEESVIVLP-GITV------------GL 213 (246)
Q Consensus 152 ~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~ll~~~gi~v~p-g~~f------------~~ 213 (246)
.+.+.|++. ++. +..|.+++++|+.+..-. ++. +..++ ...++.++||.+.+ |..| ..
T Consensus 324 ~l~~~L~~~-g~~-~~~p~~~~~~~~~~~~~~-~~~-~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~ 399 (456)
T 2ez2_A 324 YLGDKLKAA-GVP-IVEPVGGHAVFLDARRFC-EHL-TQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPK 399 (456)
T ss_dssp HHHHHHHHT-TCC-BCSSCCSSEEEEEHHHHT-TTS-CGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCS
T ss_pred HHHHHHhcC-CCc-cccCCCceEEEEEhHHhc-CCC-ChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCC
Confidence 777778775 665 456788999998874200 011 12223 44444788998776 4432 11
Q ss_pred CCeEEEEee---cChHHHHHHHHHHHHHHHHHh
Q 042445 214 KDWLRITFA---VEPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 214 ~~~iRls~~---~~~~~l~~~~~~l~~~~~~~~ 243 (246)
.+++|++++ .+++++++++++|.+++++..
T Consensus 400 ~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 400 LETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp CCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred CCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 479999999 589999999999999987644
No 158
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.87 E-value=5.9e-22 Score=170.85 Aligned_cols=207 Identities=14% Similarity=0.058 Sum_probs=137.0
Q ss_pred cccCCc-CCCccC-CChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQV-FHVGSG-FSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~-NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++++|+ ||||.+ .+.+++++|.++|++||+++|+||+|+++ ..+. ......++-..+ +.|+||.+++ |+|+|
T Consensus 205 vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~d---i~s~sK~l~~-G~~~G 278 (453)
T 2cy8_A 205 FIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQALLDVQPD---LTCLAKASAG-GLPGG 278 (453)
T ss_dssp EEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHHHHHTCCCS---EEEEEGGGGT-TSSCE
T ss_pred EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhhHHhCCCCc---EEEEChhhhC-CcceE
Confidence 666664 679975 47999999999999999999999999987 4442 222222221112 3489999875 99999
Q ss_pred EEEeeCCCCCcchhhHHHHHHH------HhhhcCCCCchHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHHHhhcCC-
Q 042445 90 WLVTSDPNGILQDSGIVDSIKI------FLNISSDPATFIQGAVPQILEK-TEEEFFSKIIDILRETADKCCDRLKEIP- 161 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~- 161 (246)
|+++++ ++++.+.. ....+++.|++++.++.++|+. . .++..+.++++++.+.+.|+++.
T Consensus 279 ~v~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~----~~~~~~~~~~~~~~l~~~L~~~~~ 346 (453)
T 2cy8_A 279 ILGGRE--------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL----EDDVCAKINDLGQFAREAMNHLFA 346 (453)
T ss_dssp EEEECH--------HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH----HTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEechH--------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHHHh
Confidence 999998 88877654 1223447899999999888874 2 13344556666666666665431
Q ss_pred --CCccccCCCCceEEEEEecc-----c----cccCC--CC--hHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChH
Q 042445 162 --CITCPKKPEGSMFVMVKLNY-----S----LLEGI--NS--DMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPS 226 (246)
Q Consensus 162 --~~~~~~~~~~g~~~~~~~~~-----~----~~~~~--~~--~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~ 226 (246)
++. ...+..|.++|++++. . .++.. .+ ....+...|.++||.+.|+ +.+|+++..+++
T Consensus 347 ~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~------~~~~l~~~~t~~ 419 (453)
T 2cy8_A 347 RKGLN-WLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR------GSVFLSAQHERE 419 (453)
T ss_dssp HTTCC-EEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT------TEEECCTTCCHH
T ss_pred hCCCc-EEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC------CCEEeeccCCHH
Confidence 232 1134456788988864 1 00000 01 1233445566789999653 247777666999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 042445 227 ALENGLGRMKAFYDRHA 243 (246)
Q Consensus 227 ~l~~~~~~l~~~~~~~~ 243 (246)
++++++++|.+++++..
T Consensus 420 ~i~~~l~~l~~~l~~~~ 436 (453)
T 2cy8_A 420 HVEHLVTTFDRVLDRLA 436 (453)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988764
No 159
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.86 E-value=1.1e-21 Score=168.97 Aligned_cols=207 Identities=14% Similarity=0.163 Sum_probs=143.3
Q ss_pred hhhhhc---cc---cccCC-cCCCc-cCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEc
Q 042445 4 INQDIT---RE---FSDFQ-VFHVG-SGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 4 ~~~~~~---~~---~~~~p-~NPtG-~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
+++.++ ++ ++.+| +|||| .+++.+++++|.++|++||+++|+||+|+++.+.+..+ ....++-..+ +.
T Consensus 221 le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~-~~~~~~~~~d---i~ 296 (449)
T 2cjg_A 221 ARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAW-AYQQLDVAPD---IV 296 (449)
T ss_dssp HHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-THHHHTCCCS---EE
T ss_pred HHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcce-eecccCCCce---EE
Confidence 666663 22 55556 58999 59999999999999999999999999999887765422 2222222223 33
Q ss_pred ccccccccCCceEEEEEeeCCCCCcchhhHHHHHH-----H-HhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIK-----I-FLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRET 149 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~-----~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 149 (246)
|+||.+ |+||+++++ ++++.+. . ....+++.|++++.++.++|+...+ +...+.++++
T Consensus 297 t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~---~~~~~~~~~~ 360 (449)
T 2cjg_A 297 AFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA---EGLFERAVQH 360 (449)
T ss_dssp EECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH---HTHHHHHHHH
T ss_pred EecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHH
Confidence 789997 789999988 6666421 1 1223457899999999998874322 2345666777
Q ss_pred HHHHHHHhhc----CCC-CccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--
Q 042445 150 ADKCCDRLKE----IPC-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-- 222 (246)
Q Consensus 150 ~~~l~~~L~~----~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~-- 222 (246)
++.+.+.|++ ++. +. ...+. |.|++++++... +..++.. .|.++||.+.|+. .+++|++++
T Consensus 361 ~~~l~~~L~~l~~~~~~~~~-~~~~~-g~~~~~~~~~~~-----~~~~~~~-~l~~~Gv~v~~~g----~~~iRi~~~~~ 428 (449)
T 2cjg_A 361 GKYLRARLDELAADFPAVVL-DPRGR-GLMCAFSLPTTA-----DRDELIR-QLWQRAVIVLPAG----ADTVRFRPPLT 428 (449)
T ss_dssp HHHHHHHHHHHHHHSTTTSE-EEEEE-TTEEEEECSSHH-----HHHHHHH-HHHHTTEECEEET----TTEEEECCCTT
T ss_pred HHHHHHHHHHHHhhCCCcee-eEeec-cEEEEEEECChH-----HHHHHHH-HHHHCCeEEecCC----CCEEEEECCCC
Confidence 7777777764 344 43 23344 556667776421 1344544 4557899999964 689999776
Q ss_pred cChHHHHHHHHHHHHHHHHH
Q 042445 223 VEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 223 ~~~~~l~~~~~~l~~~~~~~ 242 (246)
.+++++++++++|.+++++.
T Consensus 429 ~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 429 VSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 48999999999999998753
No 160
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.86 E-value=9e-21 Score=161.62 Aligned_cols=207 Identities=14% Similarity=0.126 Sum_probs=141.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++|+||||.+.+ +++|.++|+++|+++|+||+|....... ++ . ....+++.|+
T Consensus 157 ~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~----~~-~---~g~div~~S~ 225 (414)
T 3ndn_A 157 SQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQ----GF-P---LGVDVVVYSG 225 (414)
T ss_dssp HHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC----CG-G---GTCSEEEEET
T ss_pred HHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-h---cCCCeEeccC
Confidence 4566666654 88999999999976 8899999999999999999998543221 11 1 1234889999
Q ss_pred ccccccCC-ceEEEEEeeCCCCCcchhhHHH-HHHHH-hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPG-LRLGWLVTSDPNGILQDSGIVD-SIKIF-LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 78 sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~-~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
||.++++| +++||+++++ +.+. .++.. ...+...++...+++.+.++ .+....+...++++.+.
T Consensus 226 sK~l~~~G~~~~G~vv~~~--------~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~-----~l~~r~~~~~~~a~~l~ 292 (414)
T 3ndn_A 226 TKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE-----TLAIRVQHSNASAQRIA 292 (414)
T ss_dssp TTTTTCSSCCCCEEEEECH--------HHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG-----GHHHHHHHHHHHHHHHH
T ss_pred CccccCCCCceEEEEEECH--------HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH
Confidence 99999988 8999999988 6665 56544 33344556666665555554 25556667788889999
Q ss_pred HHhhcCCCCccccCCC----------------CceEEEEEeccc----cccCCCChHHHHHHHHHhcCeEEecCCCcC--
Q 042445 155 DRLKEIPCITCPKKPE----------------GSMFVMVKLNYS----LLEGINSDMEFALKLAKEESVIVLPGITVG-- 212 (246)
Q Consensus 155 ~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~----~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-- 212 (246)
+.|++.|++..+..|. .|..+++.++.. . ...+.+.+.++..++.+.+|..+.
T Consensus 293 ~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~-----~~~~~~~~~l~~~~~~~s~G~~~sl~ 367 (414)
T 3ndn_A 293 EFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAK-----QRAFEVLDKMRLIDISNNLGDAKSLV 367 (414)
T ss_dssp HHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHH-----HHHHHHHHHCSSSEECSCCSCSSCEE
T ss_pred HHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccH-----HHHHHHHHhCccceEcCCCCCCCcee
Confidence 9998887765443432 577888888642 1 134444555666677777765432
Q ss_pred --------------------C-CCeEEEEeecChHHHHHHHHHHHHHH
Q 042445 213 --------------------L-KDWLRITFAVEPSALENGLGRMKAFY 239 (246)
Q Consensus 213 --------------------~-~~~iRls~~~~~~~l~~~~~~l~~~~ 239 (246)
. ++.||+|++.++ .+..++.|.+++
T Consensus 368 ~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~--~~dli~dl~~al 413 (414)
T 3ndn_A 368 THPATTTHRAMGPEGRAAIGLGDGVVRISVGLED--TDDLIADIDRAL 413 (414)
T ss_dssp ECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSC--HHHHHHHHHHHH
T ss_pred eCccccccccCCHHHHHhcCCCCCeEEEEeCcCC--HHHHHHHHHHhh
Confidence 1 689999999732 234455555543
No 161
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.86 E-value=7.6e-21 Score=157.24 Aligned_cols=204 Identities=12% Similarity=0.072 Sum_probs=135.0
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHH-cCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKK-LGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
+.+++.++++ ++++||||||.+++ +++|.++|++ +|+++|+||+|..+.+.. ++ ..+..+++.|
T Consensus 74 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~----~~----~~~~d~~~~s 142 (331)
T 1pff_A 74 GNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN----PL----DLGVDIVVHS 142 (331)
T ss_dssp THHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC----GG----GGTCSEEEEE
T ss_pred HHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC----hh----hcCCcEEEEE
Confidence 4556666543 78899999999997 8999999999 999999999999765431 11 1346799999
Q ss_pred cccccccCCce-EEEEEeeCCCCCcchhhHHHHHHHHhhh--cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLR-LGWLVTSDPNGILQDSGIVDSIKIFLNI--SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 77 ~sK~~~~~g~r-~G~i~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
+||.|+++|.| +||+++++. ++++.++..... +.+.+++.+.++...+.. +....+...++.+.+
T Consensus 143 ~~K~~~~~~~r~~G~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~ 210 (331)
T 1pff_A 143 ATKYINGHTDVVAGLVCSRAD-------IIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRAAENAQKV 210 (331)
T ss_dssp TTTTTSSSSSCCCEEEEECHH-------HHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
T ss_pred CccccCCCCCceEEEEEeCcH-------HHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHHHHHHHHH
Confidence 99999999999 799999753 677777765433 346788888776666652 333334445555555
Q ss_pred HHHhhcCC--------------CCcccc--CCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCC--------
Q 042445 154 CDRLKEIP--------------CITCPK--KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI-------- 209 (246)
Q Consensus 154 ~~~L~~~~--------------~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~-------- 209 (246)
.+.|++.+ ++..+. ....+.++.+.++ +.+.+..++.++||.+++.+
T Consensus 211 ~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~gI~~~~~s~g~~~sl~ 281 (331)
T 1pff_A 211 AEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD---------GLEKAKKVLDNCHVVSLAVSLGGPESLI 281 (331)
T ss_dssp HHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS---------SHHHHHHHHHTCSSSEECSSCCSSSCEE
T ss_pred HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC---------CHHHHHHHHHhCCCceeccCCCCcceee
Confidence 55554322 221100 0113555666564 23446678889999886652
Q ss_pred -C----------------cCC-CCeEEEEeec--ChHHHHHHHHHHHH
Q 042445 210 -T----------------VGL-KDWLRITFAV--EPSALENGLGRMKA 237 (246)
Q Consensus 210 -~----------------f~~-~~~iRls~~~--~~~~l~~~~~~l~~ 237 (246)
. ++. ++++|+|++. ++++++.+++.|.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 282 QHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp ECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred ecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 1 112 5899999996 45556665555543
No 162
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=1.8e-20 Score=159.73 Aligned_cols=216 Identities=11% Similarity=0.058 Sum_probs=145.4
Q ss_pred hhhhhhhc-cc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccC-CcccCCCCCccccccCCcccEEEEc
Q 042445 2 ELINQDIT-RE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYG-HLAFGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~-~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
+.+++.++ .+ ++++|+||+ ..++++|.++|++||+++|+||+|. ++.+.+..+..+.. .-+++.
T Consensus 162 ~~l~~~i~~~~~~~v~~~~~~~~~-----~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~-----~di~~~ 231 (425)
T 3ecd_A 162 DQVEALAQQHKPSLIIAGFSAYPR-----KLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH-----AHVVTS 231 (425)
T ss_dssp HHHHHHHHHHCCSEEEEECSCCCS-----CCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-----CSEEEE
T ss_pred HHHHHHHhhcCCcEEEEccccCCC-----cCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc-----CcEEEe
Confidence 34555554 22 677788874 3457899999999999999999965 43444432222221 128899
Q ss_pred ccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcC--CCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISS--DPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
|+||.+ +|.|.||+++++. .+.+.+......+. +.+.....++..++......++++.++.++++++.+
T Consensus 232 s~sK~l--~g~~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l 302 (425)
T 3ecd_A 232 TTHKTL--RGPRGGFVLTNDE-------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQAL 302 (425)
T ss_dssp ESSGGG--CCCSCEEEEESCH-------HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred cCCccc--CCCCcEEEEeCCH-------HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999996 6678999999862 56666665533221 333434444444444323456778888899999999
Q ss_pred HHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEe----cCCCcCC--CCeEEEEeec----
Q 042445 154 CDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL----PGITVGL--KDWLRITFAV---- 223 (246)
Q Consensus 154 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~~--~~~iRls~~~---- 223 (246)
.+.|++. ++..+..+.+++++|+.++... .+.+.+.+.|.++||.+. ||..+.. .+++|+++..
T Consensus 303 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~ 376 (425)
T 3ecd_A 303 GDVLKAG-GVDLVTGGTDNHLLLVDLRPKG-----LKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTR 376 (425)
T ss_dssp HHHHHHT-TCEEGGGSCSSSEEEEECGGGT-----CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHT
T ss_pred HHHHHhC-CCeeccCCCCceEEEEEeCCCC-----CCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheec
Confidence 9999885 5653333357888898876432 155667778889999999 4432222 5789999652
Q ss_pred --ChHHHHHHHHHHHHHHHHH
Q 042445 224 --EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 224 --~~~~l~~~~~~l~~~~~~~ 242 (246)
++++++++++.|.+++++.
T Consensus 377 ~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 377 GFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp TCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhcc
Confidence 3789999999999988765
No 163
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.85 E-value=3.9e-20 Score=156.96 Aligned_cols=203 Identities=13% Similarity=0.105 Sum_probs=138.0
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
|.+++.++++ ++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+.. ++ . .+..+++.|+
T Consensus 141 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~---~~~d~~~~S~ 209 (398)
T 1gc0_A 141 QALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-E---LGADLVVHSA 209 (398)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-G---GTCSEEEEET
T ss_pred HHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-h---hCceEEEECC
Confidence 4455555544 78899999999986 8999999999999999999999766432 11 1 2345889999
Q ss_pred ccccccCCceE-EEEEeeCCCCCcchhhHHH-HHHHHhh--hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRL-GWLVTSDPNGILQDSGIVD-SIKIFLN--ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 78 sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~-~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
||.++++|.|+ ||+++++ +.++ .++.... .+...+++.+.++.+.++. +....+...++++.+
T Consensus 210 sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l 276 (398)
T 1gc0_A 210 TKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LNLRMDRHCANAQVL 276 (398)
T ss_dssp TTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-----HHHHHHHHHHHHHHH
Confidence 99999999998 9999987 6665 5554433 2346788888887777763 455566667778888
Q ss_pred HHHhhcCCCCccccC----------------CCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEec---CCC----
Q 042445 154 CDRLKEIPCITCPKK----------------PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP---GIT---- 210 (246)
Q Consensus 154 ~~~L~~~~~~~~~~~----------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p---g~~---- 210 (246)
.+.|++++.+..+.. ...|.++.++++. ..+.+..++.+.++.+.. |..
T Consensus 277 ~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~l~~~~i~~~~~s~G~~~sl~ 348 (398)
T 1gc0_A 277 AEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--------GIGAGRRFMNALQLFSRAVSLGDAESLA 348 (398)
T ss_dssp HHHHHTCTTEEEEEEC----------------CCTTEEEEEETT--------HHHHHHHHHHHCSSSEECSCCSCSSCEE
T ss_pred HHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--------CHHHHHHHHHhCCCceeccCCCCcceee
Confidence 888877544321111 1235555556652 334567788888888765 321
Q ss_pred --c----------------CC-CCeEEEEeec--ChHHHHHHHHHHH
Q 042445 211 --V----------------GL-KDWLRITFAV--EPSALENGLGRMK 236 (246)
Q Consensus 211 --f----------------~~-~~~iRls~~~--~~~~l~~~~~~l~ 236 (246)
+ +. ++.||+|++. ++++++.+.+.|.
T Consensus 349 ~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~ 395 (398)
T 1gc0_A 349 QHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALK 395 (398)
T ss_dssp ECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred ecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence 0 11 4899999996 3444444444443
No 164
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.85 E-value=2.3e-20 Score=158.25 Aligned_cols=216 Identities=10% Similarity=0.043 Sum_probs=148.8
Q ss_pred hhhhhhhcc-c---cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITR-E---FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~-~---~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.+++ + ++.+|+|+ |... ++++|.++|++||+++|+||+|+.+.... +... ..+.. .-+++.|+
T Consensus 153 ~~l~~~i~~~~~~~v~~~~~~~-~~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~~-~~~~-~~~~~--~di~~~s~ 224 (405)
T 2vi8_A 153 DDVREKARLHRPKLIVAAAAAY-PRII---DFAKFREIADEVGAYLMVDMAHIAGLVAA-GLHP-NPVPY--AHFVTTTT 224 (405)
T ss_dssp HHHHHHHHHHCCSEEEECCSSC-CSCC---CHHHHHHHHHHHTCEEEEECTTTHHHHHT-TSSC-CSTTT--CSEEEEES
T ss_pred HHHHHHHHhcCCeEEEEeCCCC-CccC---CHHHHHHHHHHcCCEEEEEcccccccccc-CcCC-Ccccc--CCEEEEec
Confidence 345555543 2 44455554 3332 48999999999999999999999543322 1111 11212 22889999
Q ss_pred ccccc-cCCceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCC-CCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGI-VPGLRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSD-PATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 78 sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
||.|+ ++| ||+++++ ++++.+..... ...+ .++....++..++......++++.++.++++++.+.
T Consensus 225 sK~~~g~~g---G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~ 293 (405)
T 2vi8_A 225 HKTLRGPRG---GMILCQE--------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLA 293 (405)
T ss_dssp SSTTCCCSC---EEEEECH--------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCC---eEEEEcH--------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 99987 666 9999987 88888876542 2223 344455555566664233578889999999999999
Q ss_pred HHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCC----cC--CCCeEEEEeec-----
Q 042445 155 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT----VG--LKDWLRITFAV----- 223 (246)
Q Consensus 155 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~----f~--~~~~iRls~~~----- 223 (246)
+.|+++ |+..+.++.+++++|+.++... . +...+.+.|.++||.+.||.. ++ .++++|++++.
T Consensus 294 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~ 367 (405)
T 2vi8_A 294 SALQNE-GFTLVSGGTDNHLLLVDLRPQQ---L--TGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRG 367 (405)
T ss_dssp HHHHHT-TCEEGGGSCSSSEEEEECGGGT---C--CHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTT
T ss_pred HHHHhC-CCeEecCCCCceEEEEEccCCC---C--CHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecC
Confidence 999988 7763322356899999886421 1 344455667889999999863 22 25789999984
Q ss_pred -ChHHHHHHHHHHHHHHHHH
Q 042445 224 -EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 224 -~~~~l~~~~~~l~~~~~~~ 242 (246)
+++++++++++|.+++++.
T Consensus 368 ~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 368 FGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp CCHHHHHHHHHHHHHHHTCT
T ss_pred CCHHHHHHHHHHHHHHHhcc
Confidence 7999999999999988654
No 165
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.85 E-value=3e-21 Score=163.43 Aligned_cols=216 Identities=11% Similarity=-0.023 Sum_probs=128.0
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++||||||.+++ +++|.++|+++|+++|+||+|+..... ..+... ..+++.|+
T Consensus 150 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~~~~~~----~d~~~~s~ 218 (400)
T 3vax_A 150 EGVMERLRPDTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGKVP----GDLTTP----IDMISISG 218 (400)
T ss_dssp HHHHTTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTTSG----GGGGSC----CSEEEEET
T ss_pred HHHHHhcCCCceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCCCC----cChhhc----CcEEEEeH
Confidence 4455555544 88999999999988 789999999999999999999853321 111111 33889999
Q ss_pred ccccccCCceEEEEE-eeCCCCCcchhhHHHHHH---HHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLV-TSDPNGILQDSGIVDSIK---IFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADK 152 (246)
Q Consensus 78 sK~~~~~g~r~G~i~-~~~~~~~~~~~~~~~~l~---~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (246)
+|.++.+| +|+++ +++..-...+..+...+. .... ...+.+...+.++..++.. ...++++.++.++++++.
T Consensus 219 ~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~~ 295 (400)
T 3vax_A 219 HKIGAPKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI-FEAEHAQWQVAAQDLRSR 295 (400)
T ss_dssp GGGTSCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH-HHHSHHHHHHHHHHHHHH
T ss_pred HHhCCCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHH
Confidence 99876665 67776 665100000001111010 0011 1225577777777677763 244678899999999999
Q ss_pred HHHHhhcCCCCccccCCCC---ceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC----------------
Q 042445 153 CCDRLKEIPCITCPKKPEG---SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---------------- 213 (246)
Q Consensus 153 l~~~L~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---------------- 213 (246)
+.+.|+ .+++.. ..+.+ +.++++.++.. +.+.+.+.|. +||.+.+|..|..
T Consensus 296 l~~~L~-~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~ 365 (400)
T 3vax_A 296 LLAGLA-STSFQV-NGDQDHVVPHILNLSFEDV-------DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPE 365 (400)
T ss_dssp HHHHHT-TTTCEE-CSCTTSBCTTEEEEECTTC-------CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCH
T ss_pred HHHhhC-CCCEEE-eCCcccCCCCEEEEEeCCC-------CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCc
Confidence 999999 778774 34443 45666656532 3344455666 9999999875532
Q ss_pred ---CCeEEEEe-ec--ChHHHHHHHHHHHHHHHH
Q 042445 214 ---KDWLRITF-AV--EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 214 ---~~~iRls~-~~--~~~~l~~~~~~l~~~~~~ 241 (246)
++++|+++ +. +++++++++++|++++++
T Consensus 366 ~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 366 EAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp HHHTSEEEEEEEEC--------------------
T ss_pred cccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 48999999 63 788899999999988754
No 166
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.85 E-value=5.8e-21 Score=159.80 Aligned_cols=196 Identities=15% Similarity=0.086 Sum_probs=140.5
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++|+||||.+++ ++++| +|+++++|++|..+... . .+. .. .+++.|+||.|+++| +||+
T Consensus 147 ~~~~~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~~---~-~~~---~~--d~~~~s~~K~~g~~G--~G~l 207 (362)
T 2c0r_A 147 HLTSNETIEGAQFK--AFPDT------GSVPLIGDMSSDILSRP---F-DLN---QF--GLVYAGAQKNLGPSG--VTVV 207 (362)
T ss_dssp EEESEETTTTEECS--SCCCC------TTSCEEEECTTTTTSSC---C-CGG---GC--SEEEEETTTTTCCSS--CEEE
T ss_pred EEeCCcCccceecc--ccccc------CCCEEEEEChhhccCCc---c-chh---HC--cEEEEeccccccCcC--cEEE
Confidence 78899999999755 34444 89999999999865421 1 122 12 277789999999888 9999
Q ss_pred EeeCCCCCcchhhHHHHHHHH------------h-hhcCCCCchHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHh
Q 042445 92 VTSDPNGILQDSGIVDSIKIF------------L-NISSDPATFIQGAVPQILEKTEEE-FFSKIIDILRETADKCCDRL 157 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~------------~-~~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L 157 (246)
++++ ++++.+... . ...++++...+.++..+++...+. .+++.++.++++++.+.+.|
T Consensus 208 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L 279 (362)
T 2c0r_A 208 IVRE--------DLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAI 279 (362)
T ss_dssp EEEG--------GGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcH--------HHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9988 554433221 1 122367888899998888753333 68889999999999999999
Q ss_pred hcCCCC-ccccCC--CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHH
Q 042445 158 KEIPCI-TCPKKP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGL 232 (246)
Q Consensus 158 ~~~~~~-~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~ 232 (246)
++++++ .....+ .++.++++.++... +.+.+.+.|.++||.+.||..+ .+++|+|++. +++++++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~L~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~ 351 (362)
T 2c0r_A 280 DQSGGFYRGCVDVDSRSDMNITFRLASEE------LEKEFVKASEQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALV 351 (362)
T ss_dssp HTSTTSSEESSCGGGBCSSEEEEECSCHH------HHHHHHHHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHH
T ss_pred HHcCCccccCCChHHcCCcEEEEEcCCcc------hHHHHHHHHHHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHH
Confidence 988535 422222 24556777775321 3344455678899999888766 5789999985 789999999
Q ss_pred HHHHHHHHHH
Q 042445 233 GRMKAFYDRH 242 (246)
Q Consensus 233 ~~l~~~~~~~ 242 (246)
+.|+++++++
T Consensus 352 ~~l~~~~~~~ 361 (362)
T 2c0r_A 352 QFMEHFKRSR 361 (362)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999888764
No 167
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.85 E-value=1.2e-20 Score=160.50 Aligned_cols=208 Identities=12% Similarity=0.069 Sum_probs=146.6
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++|+||||.+++ +++|.++|+++|+++|+||+|+.... +. .+..+ +..+++.|+
T Consensus 156 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~---~~-~~~~~---~~d~~~~s~ 225 (416)
T 1qz9_A 156 EELPQAIDQDTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGAV---PV-DLHQA---GADYAIGCT 225 (416)
T ss_dssp GGHHHHCSTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS---CC-CHHHH---TCSEEEECS
T ss_pred HHHHHHhCCCceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccCc---CC-Chhhc---CCCEEEecC
Confidence 4566666544 88999999999988 78999999999999999999984221 11 12222 234888899
Q ss_pred ccccccCCceE-EEEEeeCCCCCcchhhHHHHHHHH-----------------------hhh-cCCCCchHHHHHHHHHh
Q 042445 78 SKRGIVPGLRL-GWLVTSDPNGILQDSGIVDSIKIF-----------------------LNI-SSDPATFIQGAVPQILE 132 (246)
Q Consensus 78 sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~~l~~~-----------------------~~~-~~~~~~~~q~~~~~~l~ 132 (246)
+|.+ ++|.++ ||+++++ ++++.+... ... .++.+...+.++..++.
T Consensus 226 ~K~l-~~g~~~~g~l~~~~--------~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 296 (416)
T 1qz9_A 226 YKYL-NGGPGSQAFVWVSP--------QLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLD 296 (416)
T ss_dssp SSTT-CCCTTCCCEEEECT--------TTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHH
T ss_pred cccC-CCCCCCeEEEEECH--------HHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHH
Confidence 9995 556777 9999988 544444321 011 12456777777767776
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHhhcC-C--CCccccCCC----CceEEEEEeccccccCCCChHHHHHHHHHhcCeEE
Q 042445 133 KTEEEFFSKIIDILRETADKCCDRLKEI-P--CITCPKKPE----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV 205 (246)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 205 (246)
.....++++.++.++++++.+.+.|+++ + ++.. ..+. .+.++|++++. ..+ +.+.|.++||.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~--------~~~-l~~~l~~~gi~~ 366 (416)
T 1qz9_A 297 VFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTL-VTPREHAKRGSHVSFEHPE--------GYA-VIQALIDRGVIG 366 (416)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEE-CSCSSGGGBCSEEEEECTT--------HHH-HHHHHHTTTEEC
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEE-eCCCCHHHcCCEEEEecCC--------HHH-HHHHHHhCCcEe
Confidence 4223457788888999999999999884 6 6763 3442 35678877652 334 455566889987
Q ss_pred ecCCCcCCCCeEEEEee---cChHHHHHHHHHHHHHHHHH
Q 042445 206 LPGITVGLKDWLRITFA---VEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 206 ~pg~~f~~~~~iRls~~---~~~~~l~~~~~~l~~~~~~~ 242 (246)
... ..+++|++++ .+++++++++++|.+++++.
T Consensus 367 ~~~----~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 367 DYR----EPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp EEE----TTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ccC----CCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 542 3689999997 28999999999999998764
No 168
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.85 E-value=8.9e-20 Score=155.18 Aligned_cols=216 Identities=12% Similarity=0.058 Sum_probs=149.9
Q ss_pred hhhhhhhc-cc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccC-CcccCCCCCccccccCCcccEEEEc
Q 042445 2 ELINQDIT-RE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYG-HLAFGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~-~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
|.+++.++ .+ ++++||| |.+.+ +++|.++|++||+++|+||+|. +..+.+.....+. ...+++.
T Consensus 154 ~~l~~~i~~~~~~~v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~ 223 (417)
T 3n0l_A 154 EKVREIAKKEKPKLIVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSS 223 (417)
T ss_dssp HHHHHHHHHHCCSEEEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEE
T ss_pred HHHHHHHHhcCCeEEEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEe
Confidence 45555555 22 7677765 77777 8899999999999999999965 4444432222221 1338899
Q ss_pred ccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhc--CCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNIS--SDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
|+||.+ +|.|.||+++++. ++.+.+......+ .++++..+.++..++.......+++.++.++++++.+
T Consensus 224 s~sK~l--~g~~~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l 294 (417)
T 3n0l_A 224 TTHKTL--RGPRGGIIMTNDE-------ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVL 294 (417)
T ss_dssp ESSTTT--CSCSCEEEEESCH-------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred eCcccc--CCCCeeEEEECCH-------HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 999986 7788899999842 7888887664322 2344555555555555323356678888889999999
Q ss_pred HHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC------CCeEEEEee-----
Q 042445 154 CDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL------KDWLRITFA----- 222 (246)
Q Consensus 154 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~iRls~~----- 222 (246)
.+.|++. ++.....+..++++|+.+.... .+.+.+.++|.++||.+.++..+.. .+.+|+++.
T Consensus 295 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~ 368 (417)
T 3n0l_A 295 ANVLMDR-KFKLVSDGTDNHLVLMSFLDRE-----FSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTAR 368 (417)
T ss_dssp HHHHHHT-TCEEGGGSCSSSEEEEECTTSS-----SCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHT
T ss_pred HHHHHhC-CceeccCCCCceEEEEEcccCC-----CCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhC
Confidence 9999884 6654333456778888776432 1456677788899999987653321 467999976
Q ss_pred -cChHHHHHHHHHHHHHHHHH
Q 042445 223 -VEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 223 -~~~~~l~~~~~~l~~~~~~~ 242 (246)
.+++++++++++|.+++++.
T Consensus 369 ~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 369 GFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp TCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHhcc
Confidence 25799999999999988653
No 169
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.85 E-value=6.1e-20 Score=158.09 Aligned_cols=216 Identities=13% Similarity=0.069 Sum_probs=147.8
Q ss_pred hhhhhhhc---cc--cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccC-CcccCCCCCccccccCCcccEEEEc
Q 042445 2 ELINQDIT---RE--FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYG-HLAFGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~---~~--~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
|.+++.+. .+ ++++|+||++. ++++|.++|++||+++|+||+|. ++.+.+..+.++ .. .-+++.
T Consensus 175 ~~l~~~i~~~~~~~i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~---~~--~di~~~ 244 (447)
T 3h7f_A 175 DAVRATALEFRPKVIIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV---PH--ADVVST 244 (447)
T ss_dssp HHHHHHHHHHCCSEEEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST---TT--CSEEEE
T ss_pred HHHHHHHHhcCCeEEEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC---CC--CcEEEe
Confidence 34555553 23 66689999876 68999999999999999999975 444443222222 11 127799
Q ss_pred ccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhh-cC-CCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNI-SS-DPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
|+||.+ +|+|.||+++++ ++++.+...... +. +++...+.++..++....+.++++.++.+.++++.+
T Consensus 245 s~sK~l--~G~~gG~i~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l 314 (447)
T 3h7f_A 245 TVHKTL--GGGRSGLIVGKQ--------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARII 314 (447)
T ss_dssp ESSGGG--CCCSCEEEEECG--------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred cCCcCC--CCCCeEEEEECH--------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 999986 478899999988 888888765332 22 233333555555555333446788888899999999
Q ss_pred HHHhhcC----CCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEe----cCCC--cCCCCeEEEEee-
Q 042445 154 CDRLKEI----PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL----PGIT--VGLKDWLRITFA- 222 (246)
Q Consensus 154 ~~~L~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~--f~~~~~iRls~~- 222 (246)
.+.|++. +|+..+..+.+++++|+++.... .+.+.+..+++++||.+. |+.. ...++++|++..
T Consensus 315 ~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~ 389 (447)
T 3h7f_A 315 ADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSP-----LDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPA 389 (447)
T ss_dssp HHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSS-----CCHHHHHHHHHHTTEECBC-------------CEEEEECHH
T ss_pred HHHHHhccccCCCeEEecCCCCCCEEEEEcCCCC-----CCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHH
Confidence 9999875 45654334467888888876432 156667788888999998 6532 223788999875
Q ss_pred -----cChHHHHHHHHHHHHHHHHH
Q 042445 223 -----VEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 223 -----~~~~~l~~~~~~l~~~~~~~ 242 (246)
.++++++++++.|.+++++.
T Consensus 390 ~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 390 LATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred HhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 36789999999999988654
No 170
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.84 E-value=2.8e-20 Score=157.83 Aligned_cols=213 Identities=15% Similarity=0.150 Sum_probs=144.1
Q ss_pred hhhhhhhccc--cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcc-cCCCCCccccccCCcccEEEEccc-
Q 042445 2 ELINQDITRE--FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLA-FGNTPFVSMGVFGSIVPLLTLGSI- 77 (246)
Q Consensus 2 e~~~~~~~~~--~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~- 77 (246)
+.+++.++++ .+ .|+||||.+.+ +++|.++|+++|+++|+||+|+.+. +++.. +..+ ..+++.|+
T Consensus 142 ~~l~~~i~~~~~~v-~~~n~tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~----~di~~~S~~ 210 (399)
T 2oga_A 142 LLVEKAITPRTRAL-LPVHLYGHPAD---MDALRELADRHGLHIVEDAAQAHGARYRGRR---IGAG----SSVAAFSFY 210 (399)
T ss_dssp HHHHHHCCTTEEEE-CCBCGGGCCCC---HHHHHHHHHHHTCEECEECTTCTTCEETTEE---TTCT----TCEEEEECC
T ss_pred HHHHHhcCCCCeEE-EEeCCcCCccC---HHHHHHHHHHcCCEEEEECcccccCccCCee---cccc----cCEEEEeCC
Confidence 3455555543 22 26799999876 8999999999999999999998764 33221 1111 13778888
Q ss_pred -ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhh-------------cCCCCchHHHHHHHHHhhchHHHHHHHH
Q 042445 78 -SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNI-------------SSDPATFIQGAVPQILEKTEEEFFSKII 143 (246)
Q Consensus 78 -sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 143 (246)
||.++.+| |.||+++++. ++++.+...... ...++++.+.++...++. +++..
T Consensus 211 ~sK~~~~~G-~~g~~~~~~~-------~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~ 277 (399)
T 2oga_A 211 PGKNLGCFG-DGGAVVTGDP-------ELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-----LDSWN 277 (399)
T ss_dssp TTSSSCCSS-CCEEEEESCH-------HHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHH
T ss_pred CCccCCcCC-ceEEEEeCCH-------HHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-----HHHHH
Confidence 79998889 9999999742 787777665332 124567777666666652 33445
Q ss_pred HHHHHHHHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC-----------
Q 042445 144 DILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG----------- 212 (246)
Q Consensus 144 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~----------- 212 (246)
+..+++++.+.+.|++++++.....|+++.++|+.++... .+.+.+.+.|.++||.+.++....
T Consensus 278 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~ 352 (399)
T 2oga_A 278 GRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRT-----ERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEA 352 (399)
T ss_dssp HHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEEC-----SSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTS
T ss_pred HHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEEC-----CCHHHHHHHHHHCCCceecCCCCccccchhhcccC
Confidence 5566778888889988877764345666776663332211 133445556778999998754211
Q ss_pred C------------CCeEEEEeec--ChHHHHHHHHHHHHHHHHHh
Q 042445 213 L------------KDWLRITFAV--EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 213 ~------------~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~ 243 (246)
. .+++|+++.. ++++++++++.|+++++++.
T Consensus 353 ~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 353 PPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERVD 397 (399)
T ss_dssp CCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 0 2679999884 89999999999999987654
No 171
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.84 E-value=1.3e-19 Score=153.28 Aligned_cols=205 Identities=15% Similarity=0.135 Sum_probs=139.2
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+.. ++. .+..+++.|+
T Consensus 135 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~----~~~----~~~di~~~S~ 203 (389)
T 3acz_A 135 EKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLK----PLE----LGADIALHSV 203 (389)
T ss_dssp HHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GGG----TTCSEEEEET
T ss_pred HHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccC----ccc----cCCeEEEECC
Confidence 4455556543 78899999999997 8999999999999999999999765421 121 2355899999
Q ss_pred ccccccCCceE-EEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRL-GWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 78 sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
||.++++|.|+ ||+++++. ++++.++.... .+...++..+.++.+.++. +....+...++++.+.+
T Consensus 204 sK~~~~~~~~~~G~v~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r~~~~~~~~~~l~~ 271 (389)
T 3acz_A 204 SKYINGHGDVIGGVSSAKTA-------EDIATIKFYRKDAGSLMAPMDAFLCARGMKT-----LPIRMQIHMENGLKVAK 271 (389)
T ss_dssp TTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHH
T ss_pred hhhccCCCCceeEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHcCccH-----HHHHHHHHHHHHHHHHH
Confidence 99999999998 99999763 56777766543 3445677877777777763 33334455566666677
Q ss_pred HhhcCCCCccccC----------------CCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEec---C------CC
Q 042445 156 RLKEIPCITCPKK----------------PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP---G------IT 210 (246)
Q Consensus 156 ~L~~~~~~~~~~~----------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p---g------~~ 210 (246)
.|++.+.+..+.. ...|.++.+.++. .+.+..++.+.|+.+.+ | ..
T Consensus 272 ~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~---------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~ 342 (389)
T 3acz_A 272 FLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS---------FEAAKKLMEHLKVCTLAVSLGCVDTLIEH 342 (389)
T ss_dssp HHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---------HHHHHHHHTTCSSSEEBSCCCCSSCEEEC
T ss_pred HHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC---------HHHHHHHHHhCCCcEECcCCCCcccEeeC
Confidence 7765432221111 1124555666642 34456778888998877 3 22
Q ss_pred cC----------------C-CCeEEEEeecChHHHHHHHHHHHHHHH
Q 042445 211 VG----------------L-KDWLRITFAVEPSALENGLGRMKAFYD 240 (246)
Q Consensus 211 f~----------------~-~~~iRls~~~~~~~l~~~~~~l~~~~~ 240 (246)
|. . ++.||+|++.+ +.++.++.|.++++
T Consensus 343 ~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~ 387 (389)
T 3acz_A 343 PASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALE 387 (389)
T ss_dssp TTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred CcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 21 1 47999999864 45666777777664
No 172
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.84 E-value=2.3e-19 Score=152.45 Aligned_cols=207 Identities=14% Similarity=0.170 Sum_probs=136.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcC-CEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLG-IMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~-~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
|.+++.++++ ++++|+||||.+++ +++|.++|+++| +++|+||+|..+.+.. + +. .+..+++.|
T Consensus 142 ~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~-~---~~----~~~div~~S 210 (403)
T 3cog_A 142 KLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQR-P---LA----LGADISMYS 210 (403)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCC-T---TT----TTCSEEEEE
T ss_pred HHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCC-c---cc----cCCeEEEEc
Confidence 4455556544 88999999999997 899999999999 9999999999876431 1 11 235699999
Q ss_pred cccccccCC-ceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPG-LRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 77 ~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
+||.++++| .|+||+++++. ++++.++.... .+...+++.+.++.+.++. +....+...++...+.
T Consensus 211 ~sK~~~g~~~~~~G~v~~~~~-------~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r~~~~~~n~~~l~ 278 (403)
T 3cog_A 211 ATKYMNGHSDVVMGLVSVNCE-------SLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT-----LHVRMEKHFKNGMAVA 278 (403)
T ss_dssp TTTTTTCSSCCCCEEEEECCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHH
T ss_pred ChhhccCCCCCeEEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHHHHHHHHHHHHHH
Confidence 999999876 57999999642 78888876644 3445788888888887774 3333444455555555
Q ss_pred HHhhcC--------------CCCcccc---CCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEec---CC-----
Q 042445 155 DRLKEI--------------PCITCPK---KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP---GI----- 209 (246)
Q Consensus 155 ~~L~~~--------------~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p---g~----- 209 (246)
+.|++. |++..+. ...++++.| .++. ..+...+++.+.||.+.. |.
T Consensus 279 ~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~l~~--------~~~~~~~~l~~~~i~~~~~s~G~~~sl~ 349 (403)
T 3cog_A 279 QFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTF-YIKG--------TLQHAEIFLKNLKLFTLAESLGGFESLA 349 (403)
T ss_dssp HHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEE-EESS--------CHHHHHHHHHHCSSSEECSCCSSSSCEE
T ss_pred HHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEE-EecC--------CHHHHHHHHHhCCcceEccCCCCcceee
Confidence 555443 2222110 112555555 5653 224456677788885542 21
Q ss_pred -----Cc------------CC-CCeEEEEeecChHHHHHHHHHHHHHHHHH
Q 042445 210 -----TV------------GL-KDWLRITFAVEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 210 -----~f------------~~-~~~iRls~~~~~~~l~~~~~~l~~~~~~~ 242 (246)
.+ +. ++++|+|++.+ +.++.++.|.+++++.
T Consensus 350 ~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e--~~~d~i~~l~~al~~~ 398 (403)
T 3cog_A 350 ELPAIMTHASVLKNDRDVLGISDTLIRLSVGLE--DEEDLLEDLDQALKAA 398 (403)
T ss_dssp ECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHHHH
T ss_pred ecccccccccCCHHHHHhcCCCcCeEEEEeCCC--CHHHHHHHHHHHHHHh
Confidence 11 12 57999999972 2345566666666554
No 173
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.84 E-value=9e-20 Score=156.52 Aligned_cols=209 Identities=11% Similarity=0.068 Sum_probs=142.2
Q ss_pred hhhhhhhcc---c--cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITR---E--FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~---~--~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
+.+++.+++ + ++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.... +. .+ +..+++.|
T Consensus 190 ~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~~----~~-~~---g~Div~~S 258 (445)
T 1qgn_A 190 GALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQK----AL-AL---GADLVLHS 258 (445)
T ss_dssp HHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----TT-TT---TCSEEEEC
T ss_pred HHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----cc-cc---CCEEEEEC
Confidence 345555543 3 78999999999987 7899999999999999999998654221 11 12 23488999
Q ss_pred cccccccCC-ceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 77 ISKRGIVPG-LRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 77 ~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
+||.++++| .++||+++++ ++++.+..... .+...+++...++.+.++. +....+...++++.+.
T Consensus 259 ~sK~~gg~gd~~~G~l~~~~--------~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~~~~~~a~~l~ 325 (445)
T 1qgn_A 259 ATKFLGGHNDVLAGCISGPL--------KLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALRMA 325 (445)
T ss_dssp TTTTTTCSSSCCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHHHHHHHHHHHH
T ss_pred CcccccccccceEEEEEECH--------HHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHH
Confidence 999998766 5899999988 88888876543 3434577666666555552 4445556677788899
Q ss_pred HHhhcCCCCccccCC----------------CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC------
Q 042445 155 DRLKEIPCITCPKKP----------------EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG------ 212 (246)
Q Consensus 155 ~~L~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~------ 212 (246)
+.|+++|++..+..| ..|.++++.++... ++...+...++..++.+..|..+.
T Consensus 326 ~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~-----~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~ 400 (445)
T 1qgn_A 326 EILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL-----LTTAKFVDALKIPYIAPSFGGCESIVDQPA 400 (445)
T ss_dssp HHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH-----HHHHHHHHHCSSSEECSCCCSSSCEEECHH
T ss_pred HHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH-----HHHHHHHHhCCCceEeccCCCCceeeeccc
Confidence 999888776323333 14667777776321 122333333444467777776542
Q ss_pred ----------------C-CCeEEEEeecChHHHHHHHHHHHHHHHH
Q 042445 213 ----------------L-KDWLRITFAVEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 213 ----------------~-~~~iRls~~~~~~~l~~~~~~l~~~~~~ 241 (246)
. ++.||+|++. |+++.+++.|.+++++
T Consensus 401 ~~~h~~~~~~~~~~~g~~~~~iRlSvG~--Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 401 IMSYWDLSQSDRAKYGIMDNLVRFSFGV--EDFDDLKADILQALDS 444 (445)
T ss_dssp HHHSTTSCHHHHHTTTCCSSEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 1 4799999994 3578888888887754
No 174
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.84 E-value=1.6e-20 Score=162.80 Aligned_cols=213 Identities=14% Similarity=0.033 Sum_probs=150.0
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.+.++ ++++| ||||.+. +++++|.++|++||+++|+|++|..+.++. . ....+ +..+++.|+
T Consensus 194 ~~L~~~i~~~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~--~-~~~~~---g~di~~~s~ 264 (474)
T 1wyu_B 194 EALKRELGPHVAALMLTNP-NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGW--A-RPGDM---GFDVVHLNL 264 (474)
T ss_dssp HHHHHHCSTTEEEEEECSS-CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTT--C-CHHHH---TCSEEECCT
T ss_pred HHHHHhhCCCceEEEEECC-CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccC--C-CcccC---CCcEEEEeC
Confidence 4556666543 77888 7999872 469999999999999999999998665431 1 11112 245888899
Q ss_pred ccccccC-C---ceEEEEEeeCCCCCcchhhHHHHHHH-Hh------------------h-hcCCCCchHHHHHHHHHhh
Q 042445 78 SKRGIVP-G---LRLGWLVTSDPNGILQDSGIVDSIKI-FL------------------N-ISSDPATFIQGAVPQILEK 133 (246)
Q Consensus 78 sK~~~~~-g---~r~G~i~~~~~~~~~~~~~~~~~l~~-~~------------------~-~~~~~~~~~q~~~~~~l~~ 133 (246)
+|.|++| | .|+||+++++ ++++.+.. .. . ..+..+++.+.++..++..
T Consensus 265 ~K~~~~p~g~gG~~~G~~~~~~--------~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~ 336 (474)
T 1wyu_B 265 HKTFTVPHGGGGPGSGPVGVKA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRT 336 (474)
T ss_dssp TTTTCCCCTTSCCCCCCEEECG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHH
T ss_pred ccccccCCCCCCCCeEEEEEcH--------HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHH
Confidence 9999877 4 5999999998 66655531 00 0 1123577778888888875
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCCceE--EEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCc
Q 042445 134 TEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMF--VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV 211 (246)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f 211 (246)
...+++++..+.+.++++.+.+.|+++ |+.. ..+. +.+ +|+.++.. . +..++. +.|.++||.+ |+..|
T Consensus 337 ~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~-~~~~~~~~~~~~~----~-~~~~l~-~~L~~~Gi~~-~~~~~ 406 (474)
T 1wyu_B 337 LGLEGLKKAAALAVLNARYLKELLKEK-GYRV-PYDG-PSMHEFVAQPPEG----F-RALDLA-KGLLELGFHP-PTVYF 406 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBC-SSCS-SCCSCEEEBCSTT----C-CHHHHH-HHHHHTTCCC-CEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEe-cCCC-CcceEEEEEcCCC----C-CHHHHH-HHHHHCCccc-ccccc
Confidence 446778888999999999999999987 6663 2222 233 56555221 1 344554 4555779974 66666
Q ss_pred CC--CCeEEEEeec--ChHHHHHHHHHHHHHHHH
Q 042445 212 GL--KDWLRITFAV--EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 212 ~~--~~~iRls~~~--~~~~l~~~~~~l~~~~~~ 241 (246)
+. .+++|++++. +.+++++++++|++++++
T Consensus 407 ~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 407 PLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp STTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred ccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 42 6899999996 889999999999988753
No 175
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.84 E-value=1.3e-19 Score=153.43 Aligned_cols=208 Identities=17% Similarity=0.122 Sum_probs=144.1
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++.+|+||||.+.+ +++|.++|+++|+++|+||+|+.+.... +. .+ ...+++.|+
T Consensus 142 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~----~~-~~---~~di~~~S~ 210 (392)
T 3qhx_A 142 DAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQ----PL-SL---GADVVLHST 210 (392)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEET
T ss_pred HHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCC----hH-Hh---CCcEEEEcC
Confidence 4556666554 78899999999977 8999999999999999999998543221 11 11 234889999
Q ss_pred ccccccCC-ceEEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPG-LRLGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCD 155 (246)
Q Consensus 78 sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (246)
||.++++| .++||+++++. ++.+.+..... .+...+++.+.++.+.++. +....+...++++.+.+
T Consensus 211 sK~lg~~g~~~~G~v~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~~~~~~~~~~~~l~~ 278 (392)
T 3qhx_A 211 TKYIGGHSDVVGGALVTNDE-------ELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-----LVLRMQRHSENAAAVAE 278 (392)
T ss_dssp TTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCceEEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHHHHHHHHHHHHHHH
Confidence 99999887 89999999853 77777776643 4557888888888877774 44555666788888888
Q ss_pred HhhcCCCCccccCCC----------------CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC-------
Q 042445 156 RLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG------- 212 (246)
Q Consensus 156 ~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~------- 212 (246)
.|++.+.+..+..|. .|..+++.++... ...+.+...++..|+.+..|..+.
T Consensus 279 ~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~-----~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~ 353 (392)
T 3qhx_A 279 FLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR-----TAAEQLCAKTNIFILAESLGSVESLIEHPSA 353 (392)
T ss_dssp HHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH-----HHHHHHHHHCSSSEECSCCCCSSCEEECGGG
T ss_pred HHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH-----HHHHHHHHhCCCceECCCCCCCCceeeCccc
Confidence 888876654332221 2667788886421 134444555666677777665432
Q ss_pred -------------CCCeEEEEeecChHHHHHHHHHHHHHH
Q 042445 213 -------------LKDWLRITFAVEPSALENGLGRMKAFY 239 (246)
Q Consensus 213 -------------~~~~iRls~~~~~~~l~~~~~~l~~~~ 239 (246)
.++.||||++.+ +.++.++.|.+++
T Consensus 354 ~~~~~~~~~~~g~~~~~iRlSvg~e--~~~~~i~~l~~al 391 (392)
T 3qhx_A 354 MTHASTAGSQLEVPDDLVRLSVGIE--DVADLLDDLKQAL 391 (392)
T ss_dssp TSCGGGBTTBCCCCTTEEEEECCSS--CHHHHHHHHHHHH
T ss_pred ccccccCHHHcCCCCCeEEEEeccC--CHHHHHHHHHHHh
Confidence 157799999863 3344555555544
No 176
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.84 E-value=9.5e-20 Score=154.40 Aligned_cols=137 Identities=14% Similarity=0.075 Sum_probs=101.7
Q ss_pred hhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHc----CCEEEEccccCCcccCCCCCccccccCCcccEEEE
Q 042445 3 LINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKL----GIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTL 74 (246)
Q Consensus 3 ~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~----~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~ 74 (246)
.+++.++++ ++++||||||.+++ +++|.++|+++ |+++|+||+|..+.+. . + ..+ +..+++
T Consensus 130 ~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~-~---~~~---~~di~~ 198 (393)
T 1n8p_A 130 DLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-N-P---LNF---GADIVV 198 (393)
T ss_dssp HHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-C-G---GGG---TCSEEE
T ss_pred HHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC-C-H---HHc---CCeEEE
Confidence 455556543 78899999999997 89999999999 9999999999987653 1 1 112 355999
Q ss_pred cccccccccCCceE-EEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 042445 75 GSISKRGIVPGLRL-GWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADK 152 (246)
Q Consensus 75 ~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (246)
.|+||.++++|+|+ ||+++++. ++++.+..... .+...++..+.++...+.. +....+...++++.
T Consensus 199 ~S~sK~~g~~G~rigG~~~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~ 266 (393)
T 1n8p_A 199 HSATKYINGHSDVVLGVLATNNK-------PLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-----LHLRVRQAALSANK 266 (393)
T ss_dssp EETTTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHH
T ss_pred EECcccccCCCCceeEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhccch-----HHHHHHHHHHHHHH
Confidence 99999999999999 99998532 78888876643 3445677776666566653 44555666777888
Q ss_pred HHHHhhcCCC
Q 042445 153 CCDRLKEIPC 162 (246)
Q Consensus 153 l~~~L~~~~~ 162 (246)
+.+.|++.+.
T Consensus 267 l~~~L~~~~~ 276 (393)
T 1n8p_A 267 IAEFLAADKE 276 (393)
T ss_dssp HHHHHTSCTT
T ss_pred HHHHHHhCCC
Confidence 8888877654
No 177
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.84 E-value=1.5e-19 Score=153.91 Aligned_cols=217 Identities=10% Similarity=0.022 Sum_probs=143.1
Q ss_pred hhhhhhhcc---c--cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcc-cCCCCCccccccCCcccEEEEc
Q 042445 2 ELINQDITR---E--FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLA-FGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~~---~--~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
|.+++.+++ + ++++||||+ ..+ +++|.++|++||+++|+||+|.... ..+.....+. ...+++.
T Consensus 159 ~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-----~~di~~~ 228 (420)
T 3gbx_A 159 DEMAKLAKEHKPKMIIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-----HAHVVTT 228 (420)
T ss_dssp HHHHHHHHHHCCSEEEECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-----TSSEEEE
T ss_pred HHHHHHHHhcCCeEEEEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-----cCCEEEe
Confidence 345555543 2 777898874 333 8899999999999999999986443 3332121111 1338899
Q ss_pred ccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcC--CCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISS--DPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
|+||.++ |.+.||+++++. .. ++.+.+......+. +.+...+.++..++....+.++++.++.++++++.+
T Consensus 229 s~sK~~~--g~~gg~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l 301 (420)
T 3gbx_A 229 TTHKTLA--GPRGGLILAKGG--DE---ELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAM 301 (420)
T ss_dssp ESSGGGC--SCSCEEEEESSC--CH---HHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred ecccCCC--CCCceEEEEcCC--cH---HHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHH
Confidence 9999985 444599999861 00 55566655432221 333444444444444333456788889999999999
Q ss_pred HHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEec-------CCCcCCCCeEEEEeec---
Q 042445 154 CDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP-------GITVGLKDWLRITFAV--- 223 (246)
Q Consensus 154 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-------g~~f~~~~~iRls~~~--- 223 (246)
.+.|++. ++..+..+.+++++|+.++... .+.+.+.++|.++||.+.| +..|+ .+.+|+++..
T Consensus 302 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~-~~~iRi~~~~~~~ 374 (420)
T 3gbx_A 302 VEVFLNR-GYKVVSGGTENHLFLLDLVDKN-----LTGKEADAALGRANITVNKNSVPNDPKSPFV-TSGIRIGSPAVTR 374 (420)
T ss_dssp HHHHHHT-TCEEGGGSCSSSEEEEECGGGT-----CCHHHHHHHHHHTTEECEEECCTTCSSCTTT-CSEEEEECHHHHH
T ss_pred HHHHHhc-CCeeccCCCCCeEEEEEcCCCC-----CCHHHHHHHHHHCCcEeccccCCCCccccCC-CcceEEecchhcc
Confidence 9999885 6664333367888888876432 1556677788899999998 33232 4569999873
Q ss_pred ---ChHHHHHHHHHHHHHHHHH
Q 042445 224 ---EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 224 ---~~~~l~~~~~~l~~~~~~~ 242 (246)
++++++++++.|.+++++.
T Consensus 375 ~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 375 RGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCHHHHHHHHHHHHHHHhCc
Confidence 4688999999998887653
No 178
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.83 E-value=1.6e-19 Score=152.37 Aligned_cols=213 Identities=11% Similarity=0.079 Sum_probs=142.0
Q ss_pred hhhhhhhccc--cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcc-cCCCCCccccccCCcccEEEEcccc
Q 042445 2 ELINQDITRE--FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLA-FGNTPFVSMGVFGSIVPLLTLGSIS 78 (246)
Q Consensus 2 e~~~~~~~~~--~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s 78 (246)
+.+++.++++ .+. |+||||.+.+ +++|.++|++||+++|+|++|+.+. +.+. .+..++ .+.+.|||
T Consensus 117 ~~l~~~i~~~~~~v~-~~n~tG~~~~---l~~i~~la~~~~~~li~D~a~~~g~~~~~~---~~~~~~----~i~~~S~s 185 (388)
T 1b9h_A 117 EAVAAAVTPRTKVIM-PVHMAGLMAD---MDALAKISADTGVPLLQDAAHAHGARWQGK---RVGELD----SIATFSFQ 185 (388)
T ss_dssp HHHHHHCCTTEEEEC-CBCGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEETTE---EGGGSS----SCEEEECC
T ss_pred HHHHHhcCcCceEEE-EeCCccCcCC---HHHHHHHHHHcCCEEEEecchhcCCccCCe---eccccc----ceEEEEcc
Confidence 3455555544 332 9999999865 7899999999999999999999643 3322 122221 47889999
Q ss_pred cccccCCceEEEEEeeCCCCCcchhhH--HHHHHHHhhhc--------------C--CCCchHHHHHHHHHhhchHHHHH
Q 042445 79 KRGIVPGLRLGWLVTSDPNGILQDSGI--VDSIKIFLNIS--------------S--DPATFIQGAVPQILEKTEEEFFS 140 (246)
Q Consensus 79 K~~~~~g~r~G~i~~~~~~~~~~~~~~--~~~l~~~~~~~--------------~--~~~~~~q~~~~~~l~~~~~~~~~ 140 (246)
|..+++|.|+||+++++. .+ ++.++.....+ + .++++...+ ++. ..++++
T Consensus 186 ~~K~l~g~~~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~---~~~--~~~~l~ 253 (388)
T 1b9h_A 186 NGKLMTAGEGGAVVFPDG-------ETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASV---LRA--QLARLD 253 (388)
T ss_dssp TTSSSCSSSCEEEEECTT-------CHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHH---HHH--HHTTHH
T ss_pred CCCcccCCCeEEEEECCH-------HHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHH---HHH--HHHHHH
Confidence 777677779999999872 35 56665432210 0 123332222 222 234566
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCccccC-----CCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC---
Q 042445 141 KIIDILRETADKCCDRLKEIPCITCPKK-----PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG--- 212 (246)
Q Consensus 141 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~--- 212 (246)
+..+.++++++.+.+.|++++++..... +.+++++|++++... ..+.+.+.+.|.++||.+.++....
T Consensus 254 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~~~gI~v~~~~~~~~~~ 329 (388)
T 1b9h_A 254 EQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT----EERRNALVDRLVEAGLPAFAAFRAIYRT 329 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC----HHHHHHHHHHHHHTTCCEEECCCCGGGS
T ss_pred HHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC----cccHHHHHHHHHHCCCCcccccCccccC
Confidence 7778888899999999998877764321 356899999886420 0033445556668899998865321
Q ss_pred -------------------C-------CCeEEEEee--c-ChHHHHHHHHHHHHHHHH
Q 042445 213 -------------------L-------KDWLRITFA--V-EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 213 -------------------~-------~~~iRls~~--~-~~~~l~~~~~~l~~~~~~ 241 (246)
. .+.+|+++. . ++++++.+++.|.+++++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 330 DAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp HHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred hHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 0 236999987 4 789999999999988754
No 179
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.83 E-value=1.3e-19 Score=156.58 Aligned_cols=209 Identities=20% Similarity=0.177 Sum_probs=132.9
Q ss_pred cccCCcCCC-ccCCChhhHHHHHHHHHHcCCEEEEccccCC--c--------ccCCCCCccccccC----CcccEEEEcc
Q 042445 12 FSDFQVFHV-GSGFSGSFVSPIAETAKKLGIMVIANEVYGH--L--------AFGNTPFVSMGVFG----SIVPLLTLGS 76 (246)
Q Consensus 12 ~~~~p~NPt-G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~--~--------~~~~~~~~~~~~~~----~~~~~i~~~s 76 (246)
++++||||| |.+++.+++++|.++|++||+++|+||++.. . .+.+. ++..+. .... +++.|
T Consensus 188 i~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d-~~~~s 263 (467)
T 1ax4_A 188 VSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNA---TIKEVIFDMYKYAD-ALTMS 263 (467)
T ss_dssp EEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTC---CHHHHHHHHGGGCS-EEEEE
T ss_pred EEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCC---chhhhhhhhccccc-eEEEe
Confidence 788999999 8999999999999999999999999998653 1 12221 111111 1112 45689
Q ss_pred cccccccC-CceEEEEEeeCCCCCcchhhHHHHHHHHhhh-----cCCC-CchHHHHHHHHHhhch-HHHHHHHHHHHHH
Q 042445 77 ISKRGIVP-GLRLGWLVTSDPNGILQDSGIVDSIKIFLNI-----SSDP-ATFIQGAVPQILEKTE-EEFFSKIIDILRE 148 (246)
Q Consensus 77 ~sK~~~~~-g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~-~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~ 148 (246)
+||.++++ | ||+++++.. ++++.+...... ..+. +.....++...+.... +..++ ...+
T Consensus 264 ~sK~~g~~~G---g~~~~~d~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~----~~~~ 330 (467)
T 1ax4_A 264 AKKDPLLNIG---GLVAIRDNE------EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLH----YRIG 330 (467)
T ss_dssp TTSTTCCSSC---EEEEESSCH------HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHH----HHHH
T ss_pred ccccCCCCcc---eEEEeCCHH------HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhhhhHHH----HHHH
Confidence 99998876 5 677776410 355555443221 1122 2222233333444221 12222 2336
Q ss_pred HHHHHHHHhhcCCCCccccCCCCceEEEEE-------eccccccCCCChHHHHHHHHHhcCeEEec-CCCc-------C-
Q 042445 149 TADKCCDRLKEIPCITCPKKPEGSMFVMVK-------LNYSLLEGINSDMEFALKLAKEESVIVLP-GITV-------G- 212 (246)
Q Consensus 149 ~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f-------~- 212 (246)
+++.+.+.|++ +++. +..|.+|+++|++ ++... . +..+++..++.++||.+.| |..+ +
T Consensus 331 ~~~~l~~~L~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~ 404 (467)
T 1ax4_A 331 QVKYLGDRLRE-AGIP-IQYPTGGHAVFVDCKKLVPQIPGDQ---F-PAQAVINALYLESGVRAVEIGSFLLGRDPATGE 404 (467)
T ss_dssp HHHHHHHHHHH-TTCC-BCSSCCSSEEEEESTTTCTTSCGGG---C-HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCS
T ss_pred HHHHHHHHHHh-CCCC-cccCCCceEEEEehhhhccccccCC---C-CHHHHHHHHHHhcCceeeecCcccccccccccc
Confidence 67788888877 4666 4578889999988 32111 1 2445555554899999999 5432 1
Q ss_pred ----CCCeEEEEee---cChHHHHHHHHHHHHHHHHHh
Q 042445 213 ----LKDWLRITFA---VEPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 213 ----~~~~iRls~~---~~~~~l~~~~~~l~~~~~~~~ 243 (246)
..+++||++. .+++++++++++|.+++++..
T Consensus 405 ~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 405 QKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp BCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred ccccccceEEEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence 1379999998 489999999999999887643
No 180
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.83 E-value=1.4e-19 Score=158.34 Aligned_cols=218 Identities=11% Similarity=0.071 Sum_probs=146.2
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccC-----CCCCccccccCCcccEE
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFG-----NTPFVSMGVFGSIVPLL 72 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~~~i 72 (246)
+.+++.++++ ++++|+||||.+.+ +++|.++|++||+++|+||+|+++.+. +.+...+. ....+..+
T Consensus 230 ~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~-~~~~g~d~ 305 (514)
T 3mad_A 230 AAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD-FRLEGVTS 305 (514)
T ss_dssp HHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS-TTSTTCCE
T ss_pred HHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc-ccCCCCcE
Confidence 4566666544 88999999999987 789999999999999999999987652 11111111 12223457
Q ss_pred EEcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHH-h---------hh--cCCCCchHHHHHHHHHhhchHHHHH
Q 042445 73 TLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIF-L---------NI--SSDPATFIQGAVPQILEKTEEEFFS 140 (246)
Q Consensus 73 ~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~-~---------~~--~~~~~~~~q~~~~~~l~~~~~~~~~ 140 (246)
++.|++|. +.++.++||+++++ +........ . .. ..+.+.....++..++.......++
T Consensus 306 ~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~ 376 (514)
T 3mad_A 306 VSADTHKY-GYGAKGTSVILYRR--------PDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYL 376 (514)
T ss_dssp EEECTTTT-TCCCSSCEEEEESS--------HHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECchhc-cCCCCCeEEEEEeC--------HHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHH
Confidence 88899999 46778899999988 554432211 0 00 1122222223333344322345678
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEE
Q 042445 141 KIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRIT 220 (246)
Q Consensus 141 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls 220 (246)
+..+...++++.+.+.|++++++.. ..+.. .++++..+.. +...+.+.|.++||.+ +|..| ++++|++
T Consensus 377 ~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~-~~~~~~~~~~-------~~~~l~~~L~~~Gi~v-~g~~~--~~~~Ri~ 444 (514)
T 3mad_A 377 DATRRILQAADRLKAGVRAIPSLKI-LGDPL-WVIAVASDEL-------NIYQVMEEMAGRGWRL-NGLHR--PPAFHVA 444 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTCEE-SSCCS-SEEEEECSSS-------CHHHHHHHHHTTTCBC-EEETT--TTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEE-eCCCe-EEEEEeCCCC-------CHHHHHHHHHhcCCEe-ccCCC--CCeEEEE
Confidence 8888889999999999999888874 33333 3666544321 3344556677889987 54443 6789999
Q ss_pred eec---ChHHHHHHHHHHHHHHHHHhh
Q 042445 221 FAV---EPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 221 ~~~---~~~~l~~~~~~l~~~~~~~~~ 244 (246)
+.. +++++++++++|++++++..+
T Consensus 445 ~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 445 LTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp CCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 983 568999999999999987653
No 181
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.82 E-value=1e-18 Score=151.80 Aligned_cols=221 Identities=12% Similarity=0.056 Sum_probs=148.0
Q ss_pred hhhhhhhc-cc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccC-CcccCCCCCccccccCCcccEEEEc
Q 042445 2 ELINQDIT-RE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYG-HLAFGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~-~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
|.+++.++ ++ ++ +++||+ .+++ +++|.++|+++|+++++|++|. ++...+....++. . ..+++.
T Consensus 183 d~le~~i~~~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~---~--~div~~ 252 (483)
T 1rv3_A 183 DRLEENARLFHPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE---H--CHVVTT 252 (483)
T ss_dssp HHHHHHHHHHCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG---T--CSEEEE
T ss_pred HHHHHHHhhcCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC---C--CcEEEe
Confidence 45666665 33 45 777888 7766 8899999999999999999987 3333332222221 1 237889
Q ss_pred ccccccccCCceEEEEEeeCCCCCcc-------hhhHHHHHHHHhh--hcCCCCchHHHHHHHHHhhchHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNGILQ-------DSGIVDSIKIFLN--ISSDPATFIQGAVPQILEKTEEEFFSKIIDIL 146 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~~~~-------~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 146 (246)
|++|.+ +|.|.||+++++...... .-++.+.+..... ...+++.....++..++.......+++.++++
T Consensus 253 s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~ 330 (483)
T 1rv3_A 253 TTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQV 330 (483)
T ss_dssp ESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred cCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence 999985 577889999987310000 0013334433321 12234444555556666643334678888899
Q ss_pred HHHHHHHHHHhhcCCCCccccCCC-CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEe----cCCCcCC-CCeEEEE
Q 042445 147 RETADKCCDRLKEIPCITCPKKPE-GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL----PGITVGL-KDWLRIT 220 (246)
Q Consensus 147 ~~~~~~l~~~L~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~~-~~~iRls 220 (246)
.++++.+.+.|+++ |+.. ..+. +.+++|+.+.... . +.+.+.++|.+.||.+. ||..+.. ++++|++
T Consensus 331 ~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~v~~~~~g---~--~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis 403 (483)
T 1rv3_A 331 VANCRALSAALVEL-GYKI-VTGGSDNHLILVDLRSKG---T--DGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLG 403 (483)
T ss_dssp HHHHHHHHHHHHHT-TCEE-GGGSCSSSEEEEEGGGGT---C--CHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEE
T ss_pred HHHHHHHHHHHHhc-CCEe-ccCCCCCceEEEeccCCC---C--CHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEee
Confidence 99999999999987 7764 3332 4578888886432 1 34445777889999999 8874332 7899999
Q ss_pred eec--C----hHHHHHHHHHHHHHHHH
Q 042445 221 FAV--E----PSALENGLGRMKAFYDR 241 (246)
Q Consensus 221 ~~~--~----~~~l~~~~~~l~~~~~~ 241 (246)
+.. + +++++++++.|.++++.
T Consensus 404 ~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 404 TPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp CHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 984 5 89999999999998865
No 182
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.82 E-value=1e-19 Score=157.25 Aligned_cols=225 Identities=16% Similarity=0.160 Sum_probs=138.4
Q ss_pred hhhhhhhcc----c----cccCCcCCC-ccCCChhhHHHHHHHHHHcCCEEEEccccCC----------cccCCCCCccc
Q 042445 2 ELINQDITR----E----FSDFQVFHV-GSGFSGSFVSPIAETAKKLGIMVIANEVYGH----------LAFGNTPFVSM 62 (246)
Q Consensus 2 e~~~~~~~~----~----~~~~p~NPt-G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~----------~~~~~~~~~~~ 62 (246)
|.+++.+++ + ++++||||| |.+++.+++++|.++|++||+++|+|+++.. ..+.+.....+
T Consensus 170 ~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~ 249 (467)
T 2oqx_A 170 EGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQI 249 (467)
T ss_dssp HHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHH
T ss_pred HHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHH
Confidence 455666652 2 788899998 9999999999999999999999999965543 12222211111
Q ss_pred cc--cCCcccEEEEcccccccccC-CceEEEEEeeCCCCCcchhh-HHH---HHHHHhhhcCC---CCchHHHHHHHHHh
Q 042445 63 GV--FGSIVPLLTLGSISKRGIVP-GLRLGWLVTSDPNGILQDSG-IVD---SIKIFLNISSD---PATFIQGAVPQILE 132 (246)
Q Consensus 63 ~~--~~~~~~~i~~~s~sK~~~~~-g~r~G~i~~~~~~~~~~~~~-~~~---~l~~~~~~~~~---~~~~~q~~~~~~l~ 132 (246)
.. .... . +++.|+||.++++ | ||+++++ + +++ .++.....+.+ .+...+.++. ++.
T Consensus 250 ~~~~~~~~-d-~~~~s~sK~~g~~~G---g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-al~ 315 (467)
T 2oqx_A 250 TRETYKYA-D-MLAMSAKKDAMVPMG---GLLCMKD--------DSFFDVYTECRTLCVVQEGFPTYGGLEGGAME-RLA 315 (467)
T ss_dssp HHHHGGGC-S-EEEEESSSTTCCSSC---EEEEECS--------GGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHH-HHH
T ss_pred hhhhhccC-C-eEEEecccccCCCCc---eEEEecC--------hhHHHHHHHHHHhhhccCCcccccchhhhHHH-HHH
Confidence 10 0112 2 3478999999877 5 8888877 5 444 33332211111 1122222221 222
Q ss_pred hchHHHHH-HHHHHHHHHHHHHHHHhhcCCCCccccCCCCceEEEEEecc--ccccCCC-ChHHHHHHHHHhcCeEEecC
Q 042445 133 KTEEEFFS-KIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNY--SLLEGIN-SDMEFALKLAKEESVIVLPG 208 (246)
Q Consensus 133 ~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~-~~~~~~~~ll~~~gi~v~pg 208 (246)
...+.+++ +..+...++++.+.+.|+++ ++. +. |.+++++|++++. ....... +..+++..++.++||.+.|+
T Consensus 316 ~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~ 392 (467)
T 2oqx_A 316 VGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVV-CQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEI 392 (467)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCC-EE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEE
T ss_pred HhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCe-ee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceeccc
Confidence 11122221 23344567888899999887 676 34 7789999988752 1110000 02223444448999999995
Q ss_pred CCc--C-----------CCCeEEEEee---cChHHHHHHHHHHHHHHHHHh
Q 042445 209 ITV--G-----------LKDWLRITFA---VEPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 209 ~~f--~-----------~~~~iRls~~---~~~~~l~~~~~~l~~~~~~~~ 243 (246)
..| + ..+++|++++ .+++++++++++|.+++++..
T Consensus 393 ~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 393 GSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp SHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred ccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 532 1 1379999998 679999999999999987654
No 183
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.82 E-value=5.1e-20 Score=153.45 Aligned_cols=203 Identities=10% Similarity=0.053 Sum_probs=133.4
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccC-CcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFG-SIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++| ||||.+++.+++++|.++|++||+++|+||+|.++.++..+. ....+. ....-++..|.+|. +.+ ..+|+
T Consensus 150 ~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~ 225 (359)
T 1svv_A 150 YISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEAL 225 (359)
T ss_dssp EEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEE
T ss_pred EEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEE
Confidence 77888 899999999999999999999999999999995543322111 111110 01122677789997 443 56899
Q ss_pred EEeeCCCCCcchhhHHHHHHHHh---hhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 042445 91 LVTSDPNGILQDSGIVDSIKIFL---NISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPK 167 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 167 (246)
+++++ ++++.+.... ......+......+..++.. ...++.++.++++++.+.+.| +.+++. +.
T Consensus 226 l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L-~~~~~~-~~ 292 (359)
T 1svv_A 226 IILND--------ALKPNARHLIKQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGL-EACGIR-LA 292 (359)
T ss_dssp EECSG--------GGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHH-HHTTCC-BS
T ss_pred EEEcc--------cHHHHHHHHHhcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-ccCCeE-Ec
Confidence 99877 6665555432 11112222233333445553 245678888899999999999 556776 45
Q ss_pred CCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 168 KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
.|.+++++|++++ .++...+++++||.+.+. ....++++|++++. +++++++++++|++++++.
T Consensus 293 ~~~~~~~~~~~~~----------~~~~~~l~~~~gi~v~~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 293 WPSASNQLFPILE----------NTMIAELNNDFDMYTVEP-LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp SCCSSSEECBEEE----------HHHHHHHTTTEECEEEEE-ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred cCCccceEEEEcC----------HHHHHHHHHhcCEEEEec-ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 6788999987653 245555444449998331 11136799999873 8999999999999887653
No 184
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.81 E-value=2.1e-18 Score=146.92 Aligned_cols=209 Identities=15% Similarity=0.154 Sum_probs=134.5
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++|+||||.+.+ +++|.++|++||+++|+||+|+.+.+... +. ..+..+++.|+
T Consensus 131 ~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~~---~~----~~~~di~~~S~ 200 (412)
T 2cb1_A 131 EAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFGAAGALCR---PL----AWGAHVVVESL 200 (412)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGTTTTSCC---GG----GGTCSEEEEET
T ss_pred HHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCccccccCC---cc----ccCCeEEEECC
Confidence 4566666554 78899999999986 89999999999999999999987632211 11 12356899999
Q ss_pred ccccccCCceEEEEEeeCCCCC------c--------------chhhHHHHHHHHh-h-hcCCCCchHHHHHHHHHhhch
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGI------L--------------QDSGIVDSIKIFL-N-ISSDPATFIQGAVPQILEKTE 135 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~------~--------------~~~~~~~~l~~~~-~-~~~~~~~~~q~~~~~~l~~~~ 135 (246)
+|.++++|.|+|++++.+.... + ...++.+.++... . .+...++...+++...++.
T Consensus 201 ~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-- 278 (412)
T 2cb1_A 201 TKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-- 278 (412)
T ss_dssp TTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG--
T ss_pred cccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch--
Confidence 9999999999999988763100 0 0002344444432 2 2223455555554444442
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCC----------------CCceEEEEEeccccccCCCChHHHHHHHHH
Q 042445 136 EEFFSKIIDILRETADKCCDRLKEIPCITCPKKP----------------EGSMFVMVKLNYSLLEGINSDMEFALKLAK 199 (246)
Q Consensus 136 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~ 199 (246)
+....+...++.+.+.+.|.+.+++..+..| ..+.++.+.+ . +.+.+..++.
T Consensus 279 ---l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~--------~~~~~~~~l~ 346 (412)
T 2cb1_A 279 ---VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G--------DLERASRFLG 346 (412)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S--------SHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C--------CHHHHHHHHH
Confidence 3444455667888899999888777633222 2345566666 2 3445677788
Q ss_pred hcCeEEecCC---------CcC----------------C-CCeEEEEeec--ChHHHHHHHHHH
Q 042445 200 EESVIVLPGI---------TVG----------------L-KDWLRITFAV--EPSALENGLGRM 235 (246)
Q Consensus 200 ~~gi~v~pg~---------~f~----------------~-~~~iRls~~~--~~~~l~~~~~~l 235 (246)
+.||.+ .++ .|. . ++.||+|++. ++++++.+.+.|
T Consensus 347 ~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al 409 (412)
T 2cb1_A 347 AIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEAL 409 (412)
T ss_dssp HCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred hCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHH
Confidence 899998 663 221 0 5789999996 344455544444
No 185
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.81 E-value=3.8e-19 Score=155.04 Aligned_cols=216 Identities=9% Similarity=0.010 Sum_probs=144.8
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccC-----CCCCccccccCCcccEE
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFG-----NTPFVSMGVFGSIVPLL 72 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~~~i 72 (246)
+.+++.+.++ ++++|+||||.+.+ +++|.++|++||+++|+|++|+++... +.+..+.......+..+
T Consensus 197 ~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~ 273 (497)
T 3mc6_A 197 GKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTS 273 (497)
T ss_dssp TTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCE
T ss_pred HHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcE
Confidence 5566666654 88999999999977 668888999999999999999965432 11111101111222347
Q ss_pred EEcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHh-hhcC-----CCC---------chHHHHHHHHHhhchHH
Q 042445 73 TLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFL-NISS-----DPA---------TFIQGAVPQILEKTEEE 137 (246)
Q Consensus 73 ~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~-----~~~---------~~~q~~~~~~l~~~~~~ 137 (246)
++.|++|. +.++.++||+++++ +.+....... ..+. ..+ ..++.++...+. ..
T Consensus 274 ~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~---~~ 341 (497)
T 3mc6_A 274 ISCDTHKY-GFAPKGSSVIMYRN--------SDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG---EN 341 (497)
T ss_dssp EEEETTTT-TCCCSSCEEEECSS--------HHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH---HH
T ss_pred EEECchhh-cCCCCCceeEEecC--------HHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHh---HH
Confidence 78889998 56778899999988 5554432211 1110 001 222444444433 44
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc-CCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCe
Q 042445 138 FFSKIIDILRETADKCCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDW 216 (246)
Q Consensus 138 ~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~ 216 (246)
.+++..+...++++.+.+.|++ ++++..+..|.++++.| ..+.. +...+.+.|.++||.+.++.. ++.
T Consensus 342 ~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~-~~~~~-------~~~~l~~~L~~~Gi~v~~~~~---~~~ 410 (497)
T 3mc6_A 342 GYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISF-SSKTL-------NIHELSDRLSKKGWHFNALQK---PVA 410 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEE-ECTTT-------THHHHHHHHHTTTCBCEECCS---SCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEE-eCCCC-------CHHHHHHHHHhCCEEEecCCC---CCe
Confidence 5677888888999999999998 78887544555555444 33321 344556667788998876543 457
Q ss_pred EEEEeec-ChHHHHHHHHHHHHHHHHHh
Q 042445 217 LRITFAV-EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 217 iRls~~~-~~~~l~~~~~~l~~~~~~~~ 243 (246)
+|+++.. +.++++++++.|.+++++..
T Consensus 411 ~ri~~~~~t~e~i~~~~~~L~~~l~~~~ 438 (497)
T 3mc6_A 411 LHMAFTRLSAHVVDEICDILRTTVQELK 438 (497)
T ss_dssp EEEECCTTTTCTHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 8999885 88899999999999988765
No 186
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.81 E-value=2.1e-19 Score=153.76 Aligned_cols=214 Identities=12% Similarity=0.014 Sum_probs=140.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcC----------CEEEEccccCCcccCCCCCccccccCC
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLG----------IMVIANEVYGHLAFGNTPFVSMGVFGS 67 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~----------~~ii~De~y~~~~~~~~~~~~~~~~~~ 67 (246)
+.+++.++++ ++++||||||.+++ +++|.++|+++| +++|+||+|..+.. ...+...+.
T Consensus 166 ~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~----~~~~~~~~~ 238 (432)
T 3a9z_A 166 EDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKR----RVDVEDLGV 238 (432)
T ss_dssp HHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTS----CCCHHHHCC
T ss_pred HHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCCc----ccChhhcCC
Confidence 3455555543 88999999999999 567888899999 99999999976431 112222221
Q ss_pred cccEEEEcccccccccCCceEEEEEeeCCCCCcchhhH-HHHHHH--------HhhhcCCCCchHHHHHHHHHhhchHHH
Q 042445 68 IVPLLTLGSISKRGIVPGLRLGWLVTSDPNGILQDSGI-VDSIKI--------FLNISSDPATFIQGAVPQILEKTEEEF 138 (246)
Q Consensus 68 ~~~~i~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~-~~~l~~--------~~~~~~~~~~~~q~~~~~~l~~~~~~~ 138 (246)
+ +++.|++|.+| .|+||+++++ ++ ...+.. .....++.++..+.++.+++... ..+
T Consensus 239 --d-~~~~s~~K~~g---~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~-~~~ 303 (432)
T 3a9z_A 239 --D-FLTIVGHKFYG---PRIGALYVRG--------VGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV-SEN 303 (432)
T ss_dssp --S-EEEEEGGGTTC---CSCEEEEETT--------BTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-HHH
T ss_pred --C-EEEEehhHhcC---CcceEEEEcc--------ccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH-Hhh
Confidence 2 56889999863 5699999987 32 111211 01112256788888887777742 346
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccc-cCC-----CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC
Q 042445 139 FSKIIDILRETADKCCDRLKEIPCITCP-KKP-----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG 212 (246)
Q Consensus 139 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~ 212 (246)
+++.++.++++++.+.+.|++++++... ..| ..+..+++.++... . +..++ ...+ .++.+.+|..|.
T Consensus 304 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~-~~~l--~~i~~~~G~~~~ 376 (432)
T 3a9z_A 304 CETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ---L-RGYMV-LAQC--QTLLASVGASCH 376 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT---C-CHHHH-HHHC--SSEECBSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC---C-cHHHH-HHHh--cCeEEecccccc
Confidence 7888999999999999999885444311 122 22334555565311 0 23333 2223 367777665432
Q ss_pred ---------------C-----CCeEEEEeec--ChHHHHHHHHHHHHHHHHHhh
Q 042445 213 ---------------L-----KDWLRITFAV--EPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 213 ---------------~-----~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~~ 244 (246)
. .+++|++++. +++++++++++|++++++..+
T Consensus 377 ~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 377 SDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp GGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 1 3799999996 899999999999999887653
No 187
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.80 E-value=1.6e-18 Score=147.05 Aligned_cols=209 Identities=13% Similarity=0.096 Sum_probs=138.6
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++.+|+||||.+++ +++|.++|++||+++|+||+|....+.. +.. + +..+++.|+
T Consensus 143 ~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~----~~~-~---g~div~~S~ 211 (400)
T 3nmy_A 143 AAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR----PLS-L---GADLVVHSA 211 (400)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC----GGG-G---TCSEEEEET
T ss_pred HHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC----hhh-c---CCcEEEecC
Confidence 4556666554 78899999999997 9999999999999999999998544321 111 1 244899999
Q ss_pred ccccccCCceEEE--EEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGW--LVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCC 154 (246)
Q Consensus 78 sK~~~~~g~r~G~--i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (246)
||.++++|.++|+ +++.+. ++.+.++.... .+...++...+++.+.++. +..+.+...++++.+.
T Consensus 212 sK~l~g~g~~~gG~~vv~~~~-------~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~-----l~~r~~~~~~~a~~l~ 279 (400)
T 3nmy_A 212 TKYLNGHSDMVGGIAVVGDNA-------ELAEQMAFLQNSIGGVQGPFDSFLALRGLKT-----LPLRMRAHCENALALA 279 (400)
T ss_dssp TTTTTCSSSCCCEEEEECSCH-------HHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCcceeEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHH
Confidence 9999999888766 444442 77787776633 4546788877777776663 5556667788899999
Q ss_pred HHhhcCCCCccccCC----------------CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC------
Q 042445 155 DRLKEIPCITCPKKP----------------EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG------ 212 (246)
Q Consensus 155 ~~L~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~------ 212 (246)
+.|++.|.+..+..| ..|..++++++... +....+.+.++-.++.+..|..+.
T Consensus 280 ~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~-----~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~ 354 (400)
T 3nmy_A 280 QWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF-----DAAKRFCEKTELFTLAESLGGVESLVNHPA 354 (400)
T ss_dssp HHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH-----HHHHHHHHHCSSSEECSCCCSSSCEEECTT
T ss_pred HHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH-----HHHHHHHHcCCcceEecCCCCCcceeeCcc
Confidence 999887766544333 24677888886321 122233333433344444443321
Q ss_pred -----------------CCCeEEEEeecChHHHHHHHHHHHHHHH
Q 042445 213 -----------------LKDWLRITFAVEPSALENGLGRMKAFYD 240 (246)
Q Consensus 213 -----------------~~~~iRls~~~~~~~l~~~~~~l~~~~~ 240 (246)
.++.+|+|++.++ .+..++.|.++++
T Consensus 355 ~~~~~~~~~~~~~~~gi~~~liRlsvGle~--~~dli~dl~~al~ 397 (400)
T 3nmy_A 355 VMTHASIPVARREQLGISDALVRLSVGIED--LGDLRGDLERALV 397 (400)
T ss_dssp TTTTTTSCHHHHHHHTCCTTEEEEECCSSC--HHHHHHHHHHHHC
T ss_pred ccccccCCHHHHHhcCCCcCeEEEEeCcCC--HHHHHHHHHHHHh
Confidence 1578999999732 2334555666664
No 188
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.80 E-value=3.2e-18 Score=145.87 Aligned_cols=139 Identities=10% Similarity=0.033 Sum_probs=99.3
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHH--cCCEEEEccccCCcccCCCCCccccccCCcccEEEEc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKK--LGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
|.+++.++++ ++.+|+||||.+.+ +++|.++|++ +|+++|+|++|+.+... .++ .+ +..+++.
T Consensus 158 ~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~----~p~-~~---g~Div~~ 226 (415)
T 2fq6_A 158 ADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF----KAL-DF---GIDVSIQ 226 (415)
T ss_dssp GGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS----CGG-GG---TCSEEEE
T ss_pred HHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC----Ccc-cc---CCeEEEE
Confidence 5667777654 77899999999997 8899999999 99999999999865322 122 12 2348899
Q ss_pred ccccccccCCce-EEEEEeeCCCCCcchhhHHHHHHHHhh-hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 042445 76 SISKRGIVPGLR-LGWLVTSDPNGILQDSGIVDSIKIFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKC 153 (246)
Q Consensus 76 s~sK~~~~~g~r-~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 153 (246)
|++|.++++|.+ .||+++++ ++++.++.... .+...++....++...++ .+....+...++.+.+
T Consensus 227 S~sK~lg~~g~~~~G~l~~~~--------~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~-----~l~~r~~~~~~n~~~l 293 (415)
T 2fq6_A 227 AATKYLVGHSDAMIGTAVCNA--------RCWEQLRENAYLMGQMVDADTAYITSRGLR-----TLGVRLRQHHESSLKV 293 (415)
T ss_dssp ETTTTTTCSSSCCCEEEEECT--------TTHHHHHHHHHHTTCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
T ss_pred eCccccCCCCCceEEEEEeCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhh-----HHHHHHHHHHHHHHHH
Confidence 999999998865 59999887 66777766543 333445554444444443 3555666677888888
Q ss_pred HHHhhcCCCCc
Q 042445 154 CDRLKEIPCIT 164 (246)
Q Consensus 154 ~~~L~~~~~~~ 164 (246)
.+.|++.|.+.
T Consensus 294 ~~~L~~~~~v~ 304 (415)
T 2fq6_A 294 AEWLAEHPQVA 304 (415)
T ss_dssp HHHHHTCTTEE
T ss_pred HHHHHcCCCee
Confidence 88888765443
No 189
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.80 E-value=2e-18 Score=147.65 Aligned_cols=213 Identities=10% Similarity=-0.002 Sum_probs=134.6
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+.. +. .. +..+++.|+
T Consensus 158 ~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~~----~~-~~---g~div~~S~ 226 (430)
T 3ri6_A 158 LAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLLE----AK-RL---GVDIEVLSS 226 (430)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTCC----GG-GG---TCSEEEEEC
T ss_pred HHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC----hH-Hc---CCEEEEECC
Confidence 4566666554 88899999999987 7889999999999999999998554311 11 11 234899999
Q ss_pred ccccccCCceEEEEEeeCCC-CC-----cc-------hhhHHHHHHHH--hhhcCCCCchHHHHHHHHHhhchHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPN-GI-----LQ-------DSGIVDSIKIF--LNISSDPATFIQGAVPQILEKTEEEFFSKI 142 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~-~~-----~~-------~~~~~~~l~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 142 (246)
||.++++|..+|.+++.+.. .. +. ...++..++.. ...+..+++.....+.+.++ .+..+
T Consensus 227 sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~-----~l~~r 301 (430)
T 3ri6_A 227 TKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLE-----TMALR 301 (430)
T ss_dssp CCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHH-----HHHHH
T ss_pred cccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh-----hHHHH
Confidence 99999887666666653211 11 00 00123333322 22333455555444433333 35566
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccccCCC----------------CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEe
Q 042445 143 IDILRETADKCCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL 206 (246)
Q Consensus 143 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 206 (246)
.++..++++.+.+.|++.|++..+..|. ||+.+|++++... +...+.+.++-.++.+.
T Consensus 302 ~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~------~~~~~~~~l~~~~~~~s 375 (430)
T 3ri6_A 302 IERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKE------ASYRFMDALKLIRRATN 375 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHH------HHHHHHHHCSSSEECSC
T ss_pred HHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHH------HHHHHHHhCCcceecCC
Confidence 6677899999999999888877555554 5658888887321 33344445555566666
Q ss_pred cCCCcC-----------------------CCCeEEEEeec-ChHHHHHHHHHHHHHH
Q 042445 207 PGITVG-----------------------LKDWLRITFAV-EPSALENGLGRMKAFY 239 (246)
Q Consensus 207 pg~~f~-----------------------~~~~iRls~~~-~~~~l~~~~~~l~~~~ 239 (246)
+|..+. .++.||+|++. +.++ .++.|++++
T Consensus 376 ~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~~d---l~~dl~~al 429 (430)
T 3ri6_A 376 IHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEIED---LKEDILQAL 429 (430)
T ss_dssp CSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSCHHH---HHHHHHHHH
T ss_pred CCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHH---HHHHHHHhh
Confidence 776543 15899999997 4444 444444443
No 190
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.79 E-value=3.8e-18 Score=143.77 Aligned_cols=206 Identities=11% Similarity=0.075 Sum_probs=144.8
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
++++++||||.+++.+++++|.++|++||+++|+|++++ . +.++ .+..+ +..+++.|++|.++++ ..+|++
T Consensus 140 ~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~~~~-~~~~~---~~d~~~~s~~K~l~~~-~g~g~~ 210 (379)
T 3ke3_A 140 YAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---CVWL-DMKEL---GIDVLISAPQKGWSST-PCAGLV 210 (379)
T ss_dssp EEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---TCCC-CHHHH---TCSEEEECTTTTTCSC-CCEEEE
T ss_pred EEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---Cccc-ccccc---CCCEEEecchhhcCCC-CceEEE
Confidence 667778999999999999999999999999999999976 2 2121 22212 2337888999987553 358999
Q ss_pred EeeCCCCCcchhhHHHHHHHHh--h---------------------hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHH
Q 042445 92 VTSDPNGILQDSGIVDSIKIFL--N---------------------ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRE 148 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~--~---------------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 148 (246)
++++ ++++.+.... . +.++.++..++++.+++....+..+++.++++++
T Consensus 211 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~ 282 (379)
T 3ke3_A 211 MLSA--------AAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWE 282 (379)
T ss_dssp EECH--------HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred EECH--------HHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Confidence 9988 7777765410 0 1125566777777777764333336788888899
Q ss_pred HHHHHHHHhhcCCCCccccCCC--CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC-----CCeEEEEe
Q 042445 149 TADKCCDRLKEIPCITCPKKPE--GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-----KDWLRITF 221 (246)
Q Consensus 149 ~~~~l~~~L~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----~~~iRls~ 221 (246)
+++.+.+.|+++ |+..+..+. .+....+.++.. +... ...|.++||.+.+|..|.. .+.+|+|+
T Consensus 283 l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~~-------~~~~-~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~ 353 (379)
T 3ke3_A 283 LGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTERD-------DMHK-GSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGL 353 (379)
T ss_dssp HHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSCH-------HHHS-SHHHHHTTCCCEECCCCSSCCCTTCCEEEEEC
T ss_pred HHHHHHHHHHHc-CCEecCCccccCceEEEEccCCc-------chHH-HHHHHHCCeEEeCCccccccccCcCCEEEEeC
Confidence 999999999887 665433321 222222222211 2222 4567789999999886543 68999999
Q ss_pred ec--ChHHHHHHHHHHHHHHHHHh
Q 042445 222 AV--EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 222 ~~--~~~~l~~~~~~l~~~~~~~~ 243 (246)
.. ++++++++++.|+++++++.
T Consensus 354 ~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 354 FGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp CSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHHHHHHHHhc
Confidence 84 88899999999999998765
No 191
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.79 E-value=4.4e-19 Score=153.38 Aligned_cols=200 Identities=11% Similarity=0.032 Sum_probs=138.7
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccc-cCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGI-VPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~g~r~G~ 90 (246)
++++||||||.+++ +++|.++|++||+++|+|++|+..... ..+.. .+..+++.|++|.++ +|+ ++|+
T Consensus 219 ~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~~----~~~~~---~~~D~~~~s~~K~l~~gp~-~~g~ 287 (465)
T 3e9k_A 219 LFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGNVE----LYLHD---WGVDFACWCSYKYLNAGAG-GIAG 287 (465)
T ss_dssp EEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHH---HTCCEEEECSSSTTCCCTT-CCCE
T ss_pred EEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCCcC----Cchhh---cCCCEEEECcccccccCCC-ceEE
Confidence 88999999999988 788999999999999999998853321 11111 223488899999984 444 7899
Q ss_pred EEeeCCCCCcchhhHHHHHHHHh-------------------------hh-cCCCCchHHHHHHHHHhhchHHHHHHHHH
Q 042445 91 LVTSDPNGILQDSGIVDSIKIFL-------------------------NI-SSDPATFIQGAVPQILEKTEEEFFSKIID 144 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~~-------------------------~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 144 (246)
+++++ ++.+.+.... .+ .++++.+...++.+++....+..+++.++
T Consensus 288 l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~ 359 (465)
T 3e9k_A 288 AFIHE--------KHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRK 359 (465)
T ss_dssp EEECG--------GGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred EEEcH--------HHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 99877 4443332110 00 11456666666666666432334788999
Q ss_pred HHHHHHHHHHHHhhcC----------CCCccccCCC----CceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCC
Q 042445 145 ILRETADKCCDRLKEI----------PCITCPKKPE----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT 210 (246)
Q Consensus 145 ~~~~~~~~l~~~L~~~----------~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~ 210 (246)
..+++++.+.+.|+++ +++.. ..|. .|.+++++++.. ..+ +.+.|.++||.+..
T Consensus 360 ~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~-~~p~~~~~~g~~~~~~~~~~-------~~~-l~~~L~~~Gi~v~~--- 427 (465)
T 3e9k_A 360 KSVLLTGYLEYLIKHNYGKDKAATKKPVVNI-ITPSHVEERGCQLTITFSVP-------NKD-VFQELEKRGVVCDK--- 427 (465)
T ss_dssp HHHHHHHHHHHHHHHHCC---------CEEE-CSCSSGGGBCSCEEEEECCT-------TCC-HHHHHHTTTEECEE---
T ss_pred HHHHHHHHHHHHHHhhccccccccCCCCeEE-eCCCCHhhcccEEEEEecCC-------HHH-HHHHHHHCCEEEec---
Confidence 9999999999999874 67763 3443 377778777621 233 44556688999873
Q ss_pred cCCCCeEEEEe-e-c-ChHHHHHHHHHHHHHHHHHh
Q 042445 211 VGLKDWLRITF-A-V-EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 211 f~~~~~iRls~-~-~-~~~~l~~~~~~l~~~~~~~~ 243 (246)
..++++|+|+ . . +.++++++++.|++++++..
T Consensus 428 -~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~ 462 (465)
T 3e9k_A 428 -RNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAE 462 (465)
T ss_dssp -ETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC--
T ss_pred -CCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhcc
Confidence 2378999998 3 2 89999999999999987543
No 192
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.79 E-value=3.3e-18 Score=144.49 Aligned_cols=212 Identities=12% Similarity=0.134 Sum_probs=137.0
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCc-ccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHL-AFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~-~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
+.+++.++++ ++ +||||.+.+ +++|.++|+++|+++|+||+|+.+ .+.+.+ ++. ..+++.|
T Consensus 118 ~~l~~~l~~~~~~v~~---~~~~G~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~------~~~--~d~~~~S 183 (393)
T 1mdo_A 118 EHIEAAITPQTKAIIP---VHYAGAPAD---LDAIYALGERYGIPVIEDAAHATGTSYKGRH------IGA--RGTAIFS 183 (393)
T ss_dssp HHHHHHCCTTEEEECC---BCGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEETTEE------TTS--SSEEEEE
T ss_pred HHHHHhcCCCceEEEE---eCCCCCcCC---HHHHHHHHHHcCCeEEEECccccCCeECCee------cCC--CCeEEEe
Confidence 3455555443 33 369999865 899999999999999999999964 343221 111 5588999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhc-------------------------CCCCchHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNIS-------------------------SDPATFIQGAVPQIL 131 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~-------------------------~~~~~~~q~~~~~~l 131 (246)
++|..+++|.|+||+++++. ++++.+......+ +..+++...++...+
T Consensus 184 ~~k~K~l~~~~~g~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l 256 (393)
T 1mdo_A 184 FHAIKNITCAEGGIVVTDNP-------QFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQL 256 (393)
T ss_dssp CCTTSSSCSSSCEEEEESCH-------HHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHH
T ss_pred CCCCCccccccceEEEeCCH-------HHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHH
Confidence 99333345568999999742 7888777543211 113444444333333
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCC-----CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEe
Q 042445 132 EKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKP-----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL 206 (246)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 206 (246)
. .+++..+..+++++.+.+.|++++ +..+..+ .+++++|++++.... + .+.+.+.+.|.++||.+.
T Consensus 257 ~-----~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~-~--~~~~~l~~~l~~~gi~v~ 327 (393)
T 1mdo_A 257 Q-----KLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARC-G--ITRDALMASLKTKGIGTG 327 (393)
T ss_dssp H-----THHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHHH-S--SCHHHHHHHHHHTTBCCB
T ss_pred H-----HHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEeccccc-c--cCHHHHHHHHHhCCCCcc
Confidence 3 245555666678888888998875 5432223 456788988863100 0 134445566778999999
Q ss_pred cCCCc--------------CC-------CCeEEEEeec--ChHHHHHHHHHHHHHHHHHh
Q 042445 207 PGITV--------------GL-------KDWLRITFAV--EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 207 pg~~f--------------~~-------~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~ 243 (246)
+|..+ .. .+.+|+++.. ++++++++++.|+++++...
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 387 (393)
T 1mdo_A 328 LHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQGS 387 (393)
T ss_dssp CCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred cccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 98754 11 3479999984 89999999999999886654
No 193
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.78 E-value=4.4e-19 Score=153.71 Aligned_cols=200 Identities=10% Similarity=0.062 Sum_probs=130.1
Q ss_pred cccCCcCCCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
+++..+|++|. +++++++++|.++|++||+++|+||+|.++.+.+.. .....++-. ..+.+.||||.+ ++| ||
T Consensus 263 ive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~-~~~~~~gv~-~~~Di~t~sK~~-l~G---G~ 336 (472)
T 1ohv_A 263 IVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKF-WAHEHWGLD-DPADVMTFSKKM-MTG---GF 336 (472)
T ss_dssp EECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGCCS-SCCSEEEECGGG-SSE---EE
T ss_pred EEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCc-hhccccCCC-CCCCEEEEcccc-ccC---Cc
Confidence 33333578996 578999999999999999999999999987665532 222222211 012245899995 445 77
Q ss_pred EEeeCCCCCcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC----CC-Cc
Q 042445 91 LVTSDPNGILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEI----PC-IT 164 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~ 164 (246)
++ ++ ++. .+... ...+++.|++++.++.++|+...+ +...+.++++++.+.+.|+++ ++ +.
T Consensus 337 ~~-~~--------~~~-~~~~~~~~~T~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~ 403 (472)
T 1ohv_A 337 FH-KE--------EFR-PNAPYRIFNTWLGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFIS 403 (472)
T ss_dssp EE-CG--------GGS-CSSSSSSCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCE
T ss_pred cC-ch--------hhc-ccccccccCccCccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 76 44 431 11111 223446799999999888873222 234566667777777766553 32 32
Q ss_pred cccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 165 CPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 165 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
...+. |.+++++++... +..+++. .|.++||.+.|+. .++||++++. +++++++++++|.++++++
T Consensus 404 -~~~~~-g~~~~~~~~~~~-----~~~~~~~-~l~~~Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 404 -RVRGR-GTFCSFDTPDES-----IRNKLIS-IARNKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp -EEEEE-TTEEEEECSSHH-----HHHHHHH-HHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred -eecCC-ceEEEEEeCChh-----HHHHHHH-HHHHCCeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 13444 556666665321 1334444 4557899999853 6799998773 8999999999999998753
No 194
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.66 E-value=9.7e-21 Score=163.06 Aligned_cols=217 Identities=10% Similarity=0.043 Sum_probs=142.8
Q ss_pred hhhhhhhc---cc---cccCC-cCCCcc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEE
Q 042445 2 ELINQDIT---RE---FSDFQ-VFHVGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLT 73 (246)
Q Consensus 2 e~~~~~~~---~~---~~~~p-~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~ 73 (246)
+.+++.++ .+ ++..| +|++|. +.+.+++++|.++|++||+++|+||+|. +.. +. ......+ +....
T Consensus 221 ~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~-~~a~~~~---gv~pD 294 (465)
T 2yky_A 221 EGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SG-GGAQEML---GISAD 294 (465)
Confidence 44555555 22 44455 456995 4568899999999999999999999999 633 22 1122222 22234
Q ss_pred EcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHH------HhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHH
Q 042445 74 LGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKI------FLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILR 147 (246)
Q Consensus 74 ~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 147 (246)
+.||||.+++ |+|+||+++++ ++++.+.. ....+++.|+++++++.+.|+...+ +...+.++
T Consensus 295 i~t~sK~lg~-G~piG~v~~~~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~---~~~~~~~~ 362 (465)
T 2yky_A 295 LTTLGKYIGG-GMSFGAFGGRR--------DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT---RQAASDLS 362 (465)
Confidence 5689999876 99999999998 88887765 2334558899999999888874322 23455555
Q ss_pred HHHHHHHHHhhcCC---CCccccCCCCceEEEEEeccccccCC-------CChHHHHHHHHHhcCeEEecCCCcCCCCeE
Q 042445 148 ETADKCCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGI-------NSDMEFALKLAKEESVIVLPGITVGLKDWL 217 (246)
Q Consensus 148 ~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~i 217 (246)
++.+.+.+.|+++. ++. ...+..|.++++.+......+. ......+...+.++||.+.|+. |. .
T Consensus 363 ~~~~~l~~~L~~~~~~~~~~-~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~-~~--~-- 436 (465)
T 2yky_A 363 ASGDRFRANLNRIAVENQAP-LQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRG-MY--A-- 436 (465)
Confidence 66666666665421 222 2244568888887764110000 0012334445668999999976 22 1
Q ss_pred EEEeecChHHHHHHHHHHHHHHHHHh
Q 042445 218 RITFAVEPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 218 Rls~~~~~~~l~~~~~~l~~~~~~~~ 243 (246)
+++..+++++++++++|.+++++.+
T Consensus 437 -~s~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 437 -LSLEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 6766799999999999999987764
No 195
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.78 E-value=4.4e-18 Score=142.78 Aligned_cols=212 Identities=15% Similarity=0.167 Sum_probs=133.8
Q ss_pred hhhhhhhccc--cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCccc-CCCCCccccccCCcccEEEEcccc
Q 042445 2 ELINQDITRE--FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAF-GNTPFVSMGVFGSIVPLLTLGSIS 78 (246)
Q Consensus 2 e~~~~~~~~~--~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~i~~~s~s 78 (246)
+.+++.++++ .+. |+||||.+.+ +++|.++|+++|+++|+||+|+.+.. .+... ..+ ..+++.|++
T Consensus 116 ~~l~~~~~~~~~~v~-~~n~~G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~---~~~----~d~~~~s~~ 184 (374)
T 3uwc_A 116 EKIEAAITDKTKAIM-PVHYTGNIAD---MPALAKIAKKHNLHIVEDACQTILGRINDKFV---GSW----GQFACFSLH 184 (374)
T ss_dssp GGTGGGCCTTEEEEC-CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TSS----SSEEEEECS
T ss_pred HHHHHhCCCCceEEE-EeCCcCCcCC---HHHHHHHHHHcCCEEEEeCCCccCceeCCeec---ccc----ccEEEEeCC
Confidence 4555656554 222 8899999876 88999999999999999999996542 22111 111 136677766
Q ss_pred --cccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhh-------------cCCCCchHHHHHHHHHhhchHHHHHHHH
Q 042445 79 --KRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNI-------------SSDPATFIQGAVPQILEKTEEEFFSKII 143 (246)
Q Consensus 79 --K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 143 (246)
|.++++|. .|++++++. ++.+.+...... ....+++...+....+ ..+++..
T Consensus 185 ~~K~l~~~g~-~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~-----~~~~~~~ 251 (374)
T 3uwc_A 185 PLKNLNVWSD-AGVIITHSD-------EYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLM-----NQLETIT 251 (374)
T ss_dssp SSSSSCCSSC-CEEEEESCH-------HHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHG-----GGHHHHH
T ss_pred CCCcCCccce-eEEEEeCCH-------HHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHH-----HHHHHHH
Confidence 99877565 888888763 566666654321 1112333333322222 2355566
Q ss_pred HHHHHHHHHHHHHhhcCCC-CccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC---------
Q 042445 144 DILRETADKCCDRLKEIPC-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--------- 213 (246)
Q Consensus 144 ~~~~~~~~~l~~~L~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--------- 213 (246)
++.+++.+.+.+.|+++++ +.....+.++...|..+.... .+.+.+.+.|.++||.+.++.....
T Consensus 252 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~ 326 (374)
T 3uwc_A 252 EKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV-----KYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSL 326 (374)
T ss_dssp HHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE-----TTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGG
T ss_pred HHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc-----CCHHHHHHHHHHCCCccccCCCCccccChhhhhc
Confidence 6777888888899988876 653333343333321111110 1344556677888999998751100
Q ss_pred --------------CCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 214 --------------KDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 214 --------------~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
.+.+|+++.. ++++++++++.|.+++++.
T Consensus 327 ~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 327 GYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp CCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 2789999884 8999999999999998754
No 196
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.77 E-value=3.3e-17 Score=139.99 Aligned_cols=217 Identities=17% Similarity=0.230 Sum_probs=136.7
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccC-CcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYG-HLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
+.+++.++++ ++ +||||.. .++++|.++|+++|+++|+||+|+ ++.+++. ++..+. + +++.|
T Consensus 129 ~~l~~~i~~~~~~v~~---~~~tG~~---~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~---d-i~~~S 195 (424)
T 2po3_A 129 DQVAAAVTPRTSAVVG---VHLWGRP---CAADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLG---D-AEVFS 195 (424)
T ss_dssp HHHGGGCCTTEEEEEE---ECGGGCC---CCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS---S-EEEEE
T ss_pred HHHHHhhCcCCcEEEE---ECCCCCc---CCHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccc---C-EEEEe
Confidence 3455555443 33 3699986 469999999999999999999999 5666542 222221 2 88999
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcC-C--------C-CchHHHHHHHHHhhchHHHHHHHHHHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISS-D--------P-ATFIQGAVPQILEKTEEEFFSKIIDIL 146 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~--------~-~~~~q~~~~~~l~~~~~~~~~~~~~~~ 146 (246)
|||..+++|.|+||+++++. ++++.+........ . . ..+.+.++...+. ....+++..++.
T Consensus 196 ~sk~K~l~~~~~G~~v~~~~-------~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~--~~~~~~~~~~~~ 266 (424)
T 2po3_A 196 FHATKAVNAFEGGAVVTDDA-------DLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLT--SLDAFPEVIDRN 266 (424)
T ss_dssp CCTTSSSCCSSCEEEEESCH-------HHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHH--HHHHHHHHHHHH
T ss_pred CCCCCCccCCCCeEEEeCCH-------HHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHH--HHHHHHHHHHHH
Confidence 99666677789999999832 78888876543210 0 0 0223333333333 234466677777
Q ss_pred HHHHHHHHHHhhcCCCCccccCCCCc----eEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC----------
Q 042445 147 RETADKCCDRLKEIPCITCPKKPEGS----MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG---------- 212 (246)
Q Consensus 147 ~~~~~~l~~~L~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~---------- 212 (246)
+++++.+.+.|++++++..+..|+++ +++++.++.... +. +.+.+.+.|.++||.+.+.....
T Consensus 267 ~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~-~~--~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~ 343 (424)
T 2po3_A 267 RRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATT-GI--HRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQ 343 (424)
T ss_dssp HHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHH-SS--CHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTS
T ss_pred HHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccc-hh--hHHHHHHHHHHCCCceecccCCccccchhhhhc
Confidence 78888888899887777643224443 333366653100 01 34445667888999998732100
Q ss_pred ----CCCe-------EEEEee--cChHHHHHHHHHHHHHHHHHh
Q 042445 213 ----LKDW-------LRITFA--VEPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 213 ----~~~~-------iRls~~--~~~~~l~~~~~~l~~~~~~~~ 243 (246)
.++. +|+++. .++++++++++.|.+++++..
T Consensus 344 g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 344 PHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRGR 387 (424)
T ss_dssp CCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 0122 666633 389999999999999886643
No 197
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.76 E-value=5.3e-17 Score=138.39 Aligned_cols=222 Identities=20% Similarity=0.177 Sum_probs=135.8
Q ss_pred hhhhhhhccc-cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcc-cCCCCCccccccCCcccEEEEccc--
Q 042445 2 ELINQDITRE-FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLA-FGNTPFVSMGVFGSIVPLLTLGSI-- 77 (246)
Q Consensus 2 e~~~~~~~~~-~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~-- 77 (246)
+.+++.++++ -...++||||.. .++++|.++|+++|+++|+||+|+.+. +++... ..+. .+.+.||
T Consensus 121 ~~l~~~i~~~~~~v~~~~~~G~~---~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~~----~~~~~s~s~ 190 (418)
T 2c81_A 121 QLIKSAITDKTKAIIPVHLFGSM---ANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRA---GTIG----DIGAFSCQQ 190 (418)
T ss_dssp HHHGGGCCTTEEEECCBCCTTCC---CCHHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TSSS----SEEEEECCT
T ss_pred HHHHHhhCCCCeEEEEeCCcCCc---ccHHHHHHHHHHCCCEEEEECcccccCccCCEec---cccc----ceEEEeccC
Confidence 3455555544 111235799986 458999999999999999999999886 543221 1121 1677777
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCC-----------CC-------chH----HHHHHHHHhhch
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSD-----------PA-------TFI----QGAVPQILEKTE 135 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------~~-------~~~----q~~~~~~l~~~~ 135 (246)
||.+++ | |.||+++++. ++++.+......+.. .. .++ ...+..++....
T Consensus 191 ~K~~~~-g-~~g~~~~~~~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~ 261 (418)
T 2c81_A 191 GKVLTA-G-EGGIIVTKNP-------RLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQ 261 (418)
T ss_dssp TSSSCS-S-SCEEEEESCH-------HHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHH
T ss_pred CcccCC-C-CeEEEEECCH-------HHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHH
Confidence 999877 8 9999999642 777777654322100 00 000 000111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCC-ceE---EE-EEeccccccCCCChHHHHHHHHHhc-CeE---Ee
Q 042445 136 EEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEG-SMF---VM-VKLNYSLLEGINSDMEFALKLAKEE-SVI---VL 206 (246)
Q Consensus 136 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-g~~---~~-~~~~~~~~~~~~~~~~~~~~ll~~~-gi~---v~ 206 (246)
...+++..+..+++++.+.+.|++++++.....+.+ +.. ++ +.++.....+. +..++. +.|.++ ||. +.
T Consensus 262 l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~-~~L~~~~gI~~~~v~ 339 (418)
T 2c81_A 262 LQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGL-NADQFC-EILREKLNMGTFYLH 339 (418)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTTTC-CHHHHH-HHHHHHHTCCTTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcccccccc-CHHHHH-HHHHHcCCCCccccc
Confidence 223566667777788889999988888774335555 332 22 56653100011 244454 455566 999 88
Q ss_pred cCCCcC-----------------------------C-------CCeEEEEee--c-ChHHHHHHHHHHHHHHHHHhh
Q 042445 207 PGITVG-----------------------------L-------KDWLRITFA--V-EPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 207 pg~~f~-----------------------------~-------~~~iRls~~--~-~~~~l~~~~~~l~~~~~~~~~ 244 (246)
++.... . .+.+|+++. . ++++++.+++.|++++++...
T Consensus 340 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~~ 416 (418)
T 2c81_A 340 PPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFCV 416 (418)
T ss_dssp CCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC-
T ss_pred ccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhcc
Confidence 875220 0 158999997 4 889999999999999876544
No 198
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.74 E-value=7.5e-17 Score=138.95 Aligned_cols=223 Identities=15% Similarity=0.020 Sum_probs=140.1
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHc------CCEEEEccccCCccc---CCCCCccccccCCc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKL------GIMVIANEVYGHLAF---GNTPFVSMGVFGSI 68 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~------~~~ii~De~y~~~~~---~~~~~~~~~~~~~~ 68 (246)
+.+++.+.++ ++++|+||||.+.+ +++|.++|+++ |+++++|++|..+.. .+. . .. .+...
T Consensus 178 ~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~-~~-~~~~~ 251 (452)
T 2dgk_A 178 KRMIEACDENTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPD-I-VW-DFRLP 251 (452)
T ss_dssp HHHHHHCCTTEEEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTT-C-CC-STTST
T ss_pred HHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCcc-c-hh-hcCCC
Confidence 4566666544 88999999999965 88888999985 999999999998753 221 1 11 11111
Q ss_pred ccEEEEcccccccccCCceEEEEEeeCCCCCcchhhHH-HHHHHHhhh----------cCCC---CchHHHHHHHHHhhc
Q 042445 69 VPLLTLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIV-DSIKIFLNI----------SSDP---ATFIQGAVPQILEKT 134 (246)
Q Consensus 69 ~~~i~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~-~~l~~~~~~----------~~~~---~~~~q~~~~~~l~~~ 134 (246)
.-..+..|.+|. ++++.++||+++.+. +++ +.+.....+ ..+. ..+.+.++...+
T Consensus 252 ~~d~~~~~~hK~-~~~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~l--- 320 (452)
T 2dgk_A 252 RVKSISASGHKF-GLAPLGCGWVIWRDE-------EALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL--- 320 (452)
T ss_dssp TEEEEEEETTTT-TCCCSSCEEEEESSG-------GGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHH---
T ss_pred CCcEEEECcccc-cCCCCCeEEEEEcCH-------HHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHH---
Confidence 223566778994 788899999999762 222 222111110 0011 223344443333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCC---CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCC-
Q 042445 135 EEEFFSKIIDILRETADKCCDRLKEIPCITCPKKP---EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT- 210 (246)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~- 210 (246)
....+++..+...++++.+.+.|++++++..+.+. ....++.++++....... +...+.+.|.++||.+.....
T Consensus 321 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~--~~~~l~~~L~~~Gi~v~~~~~~ 398 (452)
T 2dgk_A 321 GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGY--TLYDLSERLRLRGWQVPAFTLG 398 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSC--CHHHHHHHHHHTTCBCCEEECS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccC--CHHHHHHHHHhcCCeeeeeeCC
Confidence 24567788888999999999999998777643221 234566666653210001 224445567788996543211
Q ss_pred --cCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHHh
Q 042445 211 --VGLKDWLRITFAV--EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 211 --f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~ 243 (246)
....+++|++++. ++++++..++.|++++++..
T Consensus 399 ~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~ 435 (452)
T 2dgk_A 399 GEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLS 435 (452)
T ss_dssp TTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1125689999995 78899999999998887654
No 199
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.74 E-value=4.5e-17 Score=141.94 Aligned_cols=212 Identities=14% Similarity=0.053 Sum_probs=136.9
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCcc-ccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVS-MGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
+.+.++||||.+-+ +++|.++|++||+++++|++|+++..... +.. +..+.. .-+++.|++|.+++| .++|+
T Consensus 263 v~~~~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~--~D~i~~s~hK~l~~p-~~~G~ 335 (497)
T 2qma_A 263 VGTAGTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVER--AHSISVDFHKLFYQT-ISCGA 335 (497)
T ss_dssp EEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGG--CSEEEEETTTTTCCC-SSCEE
T ss_pred EEcCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCccc--CCEEEEcchhccCCC-cceEE
Confidence 67789999999655 89999999999999999999998776433 211 222211 225677899987776 69999
Q ss_pred EEeeCCCCCcchhhHHHHHHHHhhh-cC----CC-------------CchHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 042445 91 LVTSDPNGILQDSGIVDSIKIFLNI-SS----DP-------------ATFIQGAVPQILEKTEEEFFSKIIDILRETADK 152 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~~~~-~~----~~-------------~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (246)
+++.+. ..++.+.....+ .. .+ ..+.+.++...+ ....+++..+...++++.
T Consensus 336 l~~~~~-------~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l---g~~g~~~~~~~~~~~a~~ 405 (497)
T 2qma_A 336 LLVNDK-------SNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV---GPKALGDMYDHLLAQTLE 405 (497)
T ss_dssp EEESCG-------GGGGGGCC--------------------CCSCCCTHHHHHHHHHHT---CHHHHHHHHHHHHHHHHH
T ss_pred EEEeCH-------HHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh---CHHHHHHHHHHHHHHHHH
Confidence 999763 222222110000 00 01 122233333333 245677788888899999
Q ss_pred HHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEe-e--cChHHHH
Q 042445 153 CCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-A--VEPSALE 229 (246)
Q Consensus 153 l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~-~--~~~~~l~ 229 (246)
+.+.|++++++..+..|..+ ++++++..... ....-...+...+.+.|+.+.++..+...+++|+++ . .++++++
T Consensus 406 l~~~L~~~~~~~~~~~~~~~-~v~f~~~~~~~-~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~ 483 (497)
T 2qma_A 406 VADMIRTNDQFELLAEPSLS-TVLFRATHETA-DLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFE 483 (497)
T ss_dssp HHHHHHTCTTEEECSCCSSS-EEEEEECCSSS-CHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHH
T ss_pred HHHHHhhCCCeEEEcCCCce-EEEEEEcCCcc-CHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHH
Confidence 99999998887744455554 56666653210 000001234456678899887765555567999998 3 3899999
Q ss_pred HHHHHHHHHHHHH
Q 042445 230 NGLGRMKAFYDRH 242 (246)
Q Consensus 230 ~~~~~l~~~~~~~ 242 (246)
++++.|.++++++
T Consensus 484 ~~~~~l~~~~~~~ 496 (497)
T 2qma_A 484 SLLSKINMLAVEL 496 (497)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988654
No 200
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.73 E-value=1.5e-16 Score=138.95 Aligned_cols=214 Identities=12% Similarity=0.047 Sum_probs=139.1
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCC-ccccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPF-VSMGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++|+||||.+.+ +++|.++|++||+++++|++|+++.+....+ ..+..+.. .-+++.|++|.+++| .++|+
T Consensus 250 ~~~~~~~~tG~i~~---l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~--~D~i~~~~hK~~~~p-~~~g~ 323 (504)
T 2okj_A 250 NATAGTTVYGAFDP---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER--ANSVTWNPHKMMGVL-LQCSA 323 (504)
T ss_dssp EECBSCSSSCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG--CSEEEECTTSTTCCC-SCCEE
T ss_pred EEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCccc--CCEEEECchhhcCCC-cceEE
Confidence 78999999999865 8899999999999999999999887643222 12222211 125667899998766 68999
Q ss_pred EEeeCCCCCcchhhHHHHHHHH-hhhcC---------------------CCCchHHHHHHHHHhhchHHHHHHHHHHHHH
Q 042445 91 LVTSDPNGILQDSGIVDSIKIF-LNISS---------------------DPATFIQGAVPQILEKTEEEFFSKIIDILRE 148 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~-~~~~~---------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 148 (246)
+++.+. +++...... ..... ..+.+.+.++.+++. ...+++..+...+
T Consensus 324 l~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg---~~g~~~~~~~~~~ 393 (504)
T 2okj_A 324 ILVKEK-------GILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG---TVGFENQINKCLE 393 (504)
T ss_dssp EEESST-------THHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred EEEECH-------HHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh---HHHHHHHHHHHHH
Confidence 999873 455543221 11110 113455555555554 3457778888899
Q ss_pred HHHHHHHHhhcCCCCcccc--CCCCceEEEEEeccccccCCC----------ChHHHHHHHHHhcCeEEecCCCcCC-CC
Q 042445 149 TADKCCDRLKEIPCITCPK--KPEGSMFVMVKLNYSLLEGIN----------SDMEFALKLAKEESVIVLPGITVGL-KD 215 (246)
Q Consensus 149 ~~~~l~~~L~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~gi~v~pg~~f~~-~~ 215 (246)
+++.+.+.|++++++..+. .|..+++.+...+... .+.. .....+.+.|.+.|+.+..+..+.. .+
T Consensus 394 ~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~ 472 (504)
T 2okj_A 394 LAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSL-RGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKAN 472 (504)
T ss_dssp HHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGG-SSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEE
T ss_pred HHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccc-cccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceE
Confidence 9999999999988887543 4777777654333210 0000 0123344556677754433223333 36
Q ss_pred eEEEEee---cChHHHHHHHHHHHHHHHHH
Q 042445 216 WLRITFA---VEPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 216 ~iRls~~---~~~~~l~~~~~~l~~~~~~~ 242 (246)
++|++++ .++++++++++.|+++.+++
T Consensus 473 ~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 473 FFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp EEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8999997 38899999999999887543
No 201
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.73 E-value=6.3e-17 Score=140.64 Aligned_cols=210 Identities=10% Similarity=0.012 Sum_probs=135.7
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCcc-ccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVS-MGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
+.++|+||||.+ +++++|.++|++||+++++|++|+.+.+....+.. +..+.. .. .+..+++|.+++| +++||
T Consensus 240 v~~~~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~-ad-si~~~~hK~~~~p-~~~G~ 313 (486)
T 1js3_A 240 VATLGTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF-AD-SFNFNPHKWLLVN-FDCSA 313 (486)
T ss_dssp EEEBSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG-CS-EEEECHHHHSSCC-SSCEE
T ss_pred EEeCCCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccc-cC-eeEEchhhhcCCC-cceEE
Confidence 788999999987 46999999999999999999999986653222221 122221 13 3446789997766 89999
Q ss_pred EEeeCCCCCcchhhH-HHHHHH---Hh-h-----------------hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHH
Q 042445 91 LVTSDPNGILQDSGI-VDSIKI---FL-N-----------------ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRE 148 (246)
Q Consensus 91 i~~~~~~~~~~~~~~-~~~l~~---~~-~-----------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 148 (246)
+++.+. .. .+.+.. +. . .+.....+.+.++...+ ....+++..+...+
T Consensus 314 l~~~~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~---g~~g~~~~~~~~~~ 383 (486)
T 1js3_A 314 MWVKRR-------TDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY---GVKGLQAYIRKHVQ 383 (486)
T ss_dssp EEESCH-------HHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred EEEeCH-------HHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHH---hHHHHHHHHHHHHH
Confidence 999772 22 222211 10 0 00012234444444443 24567888888899
Q ss_pred HHHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec---Ch
Q 042445 149 TADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV---EP 225 (246)
Q Consensus 149 ~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~---~~ 225 (246)
+++.+.+.|++++++..+..|..+++.+ +++... . .+.++ .+.|.+.|+.+.++..+...+++|+++.. ++
T Consensus 384 ~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~--~--~~~~l-~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~ 457 (486)
T 1js3_A 384 LSHEFEAFVLQDPRFEVCAEVTLGLVCF-RLKGSD--G--LNEAL-LERINSARKIHLVPCRLRGQFVLRFAICSRKVES 457 (486)
T ss_dssp HHHHHHHHHHHCTTEEECSCCCSSEEEE-EESSCH--H--HHHHH-HHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCH
T ss_pred HHHHHHHHHhcCCCeEEeCCCceeEEEE-EecChH--H--HHHHH-HHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCH
Confidence 9999999999988887544566555443 454210 0 03344 44555667654443445456799999863 68
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 042445 226 SALENGLGRMKAFYDRHA 243 (246)
Q Consensus 226 ~~l~~~~~~l~~~~~~~~ 243 (246)
+++++++++|++++++..
T Consensus 458 ~di~~~~~~l~~~~~~~~ 475 (486)
T 1js3_A 458 GHVRLAWEHIRGLAAELL 475 (486)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999999999887654
No 202
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.73 E-value=2.6e-16 Score=131.80 Aligned_cols=210 Identities=11% Similarity=0.059 Sum_probs=134.4
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ +++ ||||.+.+ +++|.++|++||+++|+||+|+.+.... . . .++... .+.+.|+
T Consensus 112 ~~l~~~i~~~~~~v~~~---~~tG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~-~-~---~~~~~~-~i~~~s~ 179 (375)
T 2fnu_A 112 LALEKLINERTKAIVSV---DYAGKSVE---VESVQKLCKKHSLSFLSDSSHALGSEYQ-N-K---KVGGFA-LASVFSF 179 (375)
T ss_dssp GGSGGGCCTTEEEEEEE---CGGGCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEET-T-E---ETTSSS-SEEEEEC
T ss_pred HHHHhhcCcCceEEEEe---CCcCCccC---HHHHHHHHHHcCCEEEEECccccCCeEC-C-e---eccccC-CeEEEeC
Confidence 4555555543 333 45999877 7899999999999999999998654321 1 1 122211 3778888
Q ss_pred c--cccccCCceEEEEEee-CCCCCcchhhHHHHHHHHhhhc-----------------CCCCchHHHHHHHHHhhchHH
Q 042445 78 S--KRGIVPGLRLGWLVTS-DPNGILQDSGIVDSIKIFLNIS-----------------SDPATFIQGAVPQILEKTEEE 137 (246)
Q Consensus 78 s--K~~~~~g~r~G~i~~~-~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~q~~~~~~l~~~~~~ 137 (246)
| |.++. | +|++++. +. ++++.+......+ +.++++...+.... ..
T Consensus 180 s~~K~~~~-g--~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-----~~ 244 (375)
T 2fnu_A 180 HAIKPITT-A--EGGAVVTNDS-------ELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQ-----LK 244 (375)
T ss_dssp CTTSSSCC-S--SCEEEEESCH-------HHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHH-----HT
T ss_pred CCCCCccc-c--CceEEEeCCH-------HHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHH-----HH
Confidence 8 99865 6 7888885 32 6777776653211 02233322222211 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccccCC----CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCC---
Q 042445 138 FFSKIIDILRETADKCCDRLKEIPCITCPKKP----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT--- 210 (246)
Q Consensus 138 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~--- 210 (246)
++++..+..+++++.+.+.|++++++.....+ ..++++++.++.... .+.+.+.+.|.++||.+..+..
T Consensus 245 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~gi~v~~~~~p~~ 320 (375)
T 2fnu_A 245 KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFF----TCKKLILESLHKRGILAQVHYKPIY 320 (375)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGG----GGHHHHHHHHHHTTEECBCCCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCcccc----chHHHHHHHHHHCCCCccccccccc
Confidence 46677888889999999999998777632221 124555777764210 0233445566788999983211
Q ss_pred ----cC-------C-------CCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 211 ----VG-------L-------KDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 211 ----f~-------~-------~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
|+ . .+++|+++.. ++++++++++.|.+++++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 321 QYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp GSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 11 1 2689999995 8899999999999998764
No 203
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.73 E-value=5.6e-17 Score=138.57 Aligned_cols=214 Identities=14% Similarity=0.093 Sum_probs=129.0
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
+.+++.++++ ++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.+.+.+ + .. ...+++.|+
T Consensus 135 ~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g~~~~~---~-~~---~~Di~~~s~ 204 (421)
T 2ctz_A 135 EEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYLLRP---L-AW---GAALVTHSL 204 (421)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTSCCG---G-GG---TCSEEEEET
T ss_pred HHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccccccCCc---c-cc---CCeEEEECC
Confidence 4556666554 88999999999998 899999999999999999999323332221 1 12 234889999
Q ss_pred ccccccCCceEEEEEeeC-CCCC----cchhhH---------------------HHHHHH--HhhhcCCCCchHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSD-PNGI----LQDSGI---------------------VDSIKI--FLNISSDPATFIQGAVPQ 129 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~-~~~~----~~~~~~---------------------~~~l~~--~~~~~~~~~~~~q~~~~~ 129 (246)
+|.++++|.++|++++.+ .... .. .+ ....+. ...++...+++..+++..
T Consensus 205 ~K~l~~~g~~~G~~~~~~~~~~~~~~~~~--~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~ 282 (421)
T 2ctz_A 205 TKWVGGHGAVIAGAIVDGGNFPWEGGRYP--LLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLL 282 (421)
T ss_dssp TTTTTCSSCCCCEEEEECSCSCCTTTTCH--HHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHH
T ss_pred cccccCCCCcEEEEEEeccchhhcccchh--hhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 999999999999998863 1111 00 11 111110 111333556666666555
Q ss_pred HHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCC-----------------CCceEEEEEeccccccCCCChHH
Q 042445 130 ILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKP-----------------EGSMFVMVKLNYSLLEGINSDME 192 (246)
Q Consensus 130 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~ 192 (246)
.++. +..+.+...++.+.+.+.|+++|++..+..| ..|..+.+.++... .+..
T Consensus 283 ~l~~-----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~-----~~~~ 352 (421)
T 2ctz_A 283 GMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGY-----EAAK 352 (421)
T ss_dssp HHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHH-----HHHH
T ss_pred Ccch-----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCH-----HHHH
Confidence 5552 4445555668889999999988877643222 23445555665310 0222
Q ss_pred HHHHHHHhcCeEEecCCCc----------------------CC-CCeEEEEeecChHHHHHHHHHHHHHH
Q 042445 193 FALKLAKEESVIVLPGITV----------------------GL-KDWLRITFAVEPSALENGLGRMKAFY 239 (246)
Q Consensus 193 ~~~~ll~~~gi~v~pg~~f----------------------~~-~~~iRls~~~~~~~l~~~~~~l~~~~ 239 (246)
.+...++..++.+..|..+ +. ++.||+|++.+ ++++.++.|.+++
T Consensus 353 ~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~e--~~~~li~~l~~al 420 (421)
T 2ctz_A 353 RFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGLE--HVEDLKAELKEAL 420 (421)
T ss_dssp HHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHT
T ss_pred HHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCCC--CHHHHHHHHHHHh
Confidence 2222233334444444211 01 48999999863 4566777776654
No 204
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.72 E-value=7.9e-17 Score=135.23 Aligned_cols=209 Identities=19% Similarity=0.190 Sum_probs=128.7
Q ss_pred hhhhhhhccc--cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcc-cCCCCCccccccCCcccEEEEcccc
Q 042445 2 ELINQDITRE--FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLA-FGNTPFVSMGVFGSIVPLLTLGSIS 78 (246)
Q Consensus 2 e~~~~~~~~~--~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s 78 (246)
+.+++.++++ .+. |+||||...+ +++|.++|+++|+++|+|++|+.+. +++... ..+. -+.+.||+
T Consensus 115 ~~l~~~l~~~~~~v~-~~n~~G~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~---~~~~----d~~~~S~~ 183 (373)
T 3frk_A 115 SLIESAITEKTKAII-AVHLYGQPAD---MDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKV---GSLG----DAAGFSFY 183 (373)
T ss_dssp GGTGGGCCTTEEEEE-EECCTTCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEETTEET---TSSS----SEEEEECC
T ss_pred HHHHHhcCCCCeEEE-EECCCcCccc---HHHHHHHHHHcCCEEEEECCcccCCEECCEec---cccc----cEEEEeCc
Confidence 4556666554 222 8899999765 8899999999999999999998644 232211 1111 27778877
Q ss_pred --cccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhc-------------CCCCchHHHHHHHHHhhchHHHHHHHH
Q 042445 79 --KRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNIS-------------SDPATFIQGAVPQILEKTEEEFFSKII 143 (246)
Q Consensus 79 --K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~-------------~~~~~~~q~~~~~~l~~~~~~~~~~~~ 143 (246)
|.++.+|. .|++++++. ++.+.++.....+ +.++++..++....+ ..+++..
T Consensus 184 ~~K~l~~~g~-gg~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~-----~~~~~~~ 250 (373)
T 3frk_A 184 PAKNLGSLGD-GGAVVTNDK-------DLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKL-----KYLDKWN 250 (373)
T ss_dssp TTSSSCCSSS-CEEEEESCH-------HHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHH-----HTHHHHH
T ss_pred CCCccCccce-eEEEEeCCH-------HHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHH-----HHHHHHH
Confidence 98755353 788888763 5777776554311 122444333332222 2355666
Q ss_pred HHHHHHHHHHHHHhhcCCCCccccCCCCceEEE--EEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCC--------
Q 042445 144 DILRETADKCCDRLKEIPCITCPKKPEGSMFVM--VKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------- 213 (246)
Q Consensus 144 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------- 213 (246)
++.+++.+.+.+.|++++ +.....+.++...| +.+... +.+.+.+.|.++||.+.++.....
T Consensus 251 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~ 322 (373)
T 3frk_A 251 EERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRSE-------KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKD 322 (373)
T ss_dssp HHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEES-------SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGG
T ss_pred HHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEeC-------CHHHHHHHHHHCCCCcccCcCCccccChHHHh
Confidence 677778888888888875 44322223222222 112211 345556677888999987652110
Q ss_pred ---------------CCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 214 ---------------KDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 214 ---------------~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
.+.+|+++.. +++++++.++.|+++..++
T Consensus 323 ~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~~ 368 (373)
T 3frk_A 323 LGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLEH 368 (373)
T ss_dssp GCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC---
T ss_pred cCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhhh
Confidence 2689999985 8999999999998876553
No 205
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.72 E-value=1.3e-16 Score=134.68 Aligned_cols=211 Identities=14% Similarity=0.091 Sum_probs=129.6
Q ss_pred hhhhhhhccc-cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcc-cCCCCCccccccCCcccEEEEcccc-
Q 042445 2 ELINQDITRE-FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLA-FGNTPFVSMGVFGSIVPLLTLGSIS- 78 (246)
Q Consensus 2 e~~~~~~~~~-~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s- 78 (246)
+.+++.++++ -...|+||||...+ +++|.++|+++|+++|+|++|+.+. +.+.. ...+. + +.+.|||
T Consensus 135 ~~l~~~~~~~~~~v~~~n~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~--d--i~~~S~s~ 204 (391)
T 3dr4_A 135 AKLEALITPRTKAIMPVHLYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRGKK---SGSLG--D--CATFSFFG 204 (391)
T ss_dssp GGSGGGCCTTEEEECCBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS--S--EEEEECBT
T ss_pred HHHHHhcCCCceEEEEECCCCChhh---HHHHHHHHHHcCCEEEEECcccccceECCee---ecccC--C--EEEEECCC
Confidence 4455555544 11126799999765 8889999999999999999999644 22211 11111 1 6677777
Q ss_pred -cccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhcCC-------------CCchHHHHHHHHHhhchHHHHHHHHH
Q 042445 79 -KRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNISSD-------------PATFIQGAVPQILEKTEEEFFSKIID 144 (246)
Q Consensus 79 -K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------~~~~~q~~~~~~l~~~~~~~~~~~~~ 144 (246)
|.+ +|.+.|++++++. .+.+.+......+.. .+.....++..... ...+++..+
T Consensus 205 ~K~l--~~g~gg~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~---~~~~~~~~~ 272 (391)
T 3dr4_A 205 NAII--TTGEGGMITTNDD-------DLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQ---LERVDEHLA 272 (391)
T ss_dssp TSSS--CCBSCEEEEESCH-------HHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHH---HHTHHHHHH
T ss_pred CCcC--CcCCeEEEEECCH-------HHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHH---HHHHHHHHH
Confidence 765 4457899988873 577776655322111 12222222222221 234566667
Q ss_pred HHHHHHHHHHHHhhcCCCCccccC--C----CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCc---C---
Q 042445 145 ILRETADKCCDRLKEIPCITCPKK--P----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV---G--- 212 (246)
Q Consensus 145 ~~~~~~~~l~~~L~~~~~~~~~~~--~----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f---~--- 212 (246)
..+++.+.+.+.|+++ ++..... + ...+.+++.++... +. +.+.+.+.|.++||.+.++... .
T Consensus 273 ~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~--~~~~l~~~L~~~GI~v~~~~~p~~~~~~~ 347 (391)
T 3dr4_A 273 ARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGL--ST--TRDQVIKDLDALGIESRPVFHPMHIMPPY 347 (391)
T ss_dssp HHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSC--SS--CHHHHHHHHHHTTCCCEECCCCGGGSGGG
T ss_pred HHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCcc--ch--hHHHHHHHHHHCCCceeecCCccccChhh
Confidence 7778888888899887 6653222 1 12234566665410 11 3455566677889999987521 0
Q ss_pred -------C-------CCeEEEEeec--ChHHHHHHHHHHHHHH
Q 042445 213 -------L-------KDWLRITFAV--EPSALENGLGRMKAFY 239 (246)
Q Consensus 213 -------~-------~~~iRls~~~--~~~~l~~~~~~l~~~~ 239 (246)
. .+.+|+++.. ++++++++++.|++++
T Consensus 348 ~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 348 AHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp GGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred hhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 0 4679999884 8999999999887653
No 206
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.71 E-value=7.2e-16 Score=133.49 Aligned_cols=220 Identities=14% Similarity=0.051 Sum_probs=143.9
Q ss_pred hhhhhhhc---cc--cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccC-CcccCCCCCccccccCCcccEEEEc
Q 042445 2 ELINQDIT---RE--FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYG-HLAFGNTPFVSMGVFGSIVPLLTLG 75 (246)
Q Consensus 2 e~~~~~~~---~~--~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (246)
|.+++.++ ++ +++.|+||+ .. ++++|.++|++||+++++|+++. ++...+..+.++. . --+++.
T Consensus 193 d~le~~l~~~~~klIi~~~s~~~~--~~---dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~---~--aDiv~~ 262 (490)
T 2a7v_A 193 NQLALTARLFRPRLIIAGTSAYAR--LI---DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK---H--ADIVTT 262 (490)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCS--CC---CHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG---T--CSEEEE
T ss_pred HHHHHHHhhcCCcEEEEcCCCCCC--cc---cHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC---C--CCEEEE
Confidence 44555553 23 567788885 22 48999999999999999999976 4444433222332 1 127889
Q ss_pred ccccccccCCceEEEEEeeCCCC---------CcchhhHHHHHHHHhhhc--CCCCchHHHHHHHHHhhchHHHHHHHHH
Q 042445 76 SISKRGIVPGLRLGWLVTSDPNG---------ILQDSGIVDSIKIFLNIS--SDPATFIQGAVPQILEKTEEEFFSKIID 144 (246)
Q Consensus 76 s~sK~~~~~g~r~G~i~~~~~~~---------~~~~~~~~~~l~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 144 (246)
|++|.++ |.|.|++++++... .+. ++.++++.....+ ++++.....++..++........++.++
T Consensus 263 S~hK~l~--Gp~GG~i~~~~~~~~~~~~~~~~~~~--~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~ 338 (490)
T 2a7v_A 263 TTHKTLR--GARSGLIFYRKGVKAVDPKTGREIPY--TFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSL 338 (490)
T ss_dssp ESSGGGC--SCSCEEEEEECSEEEEETTTEEEEEC--CCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred CCcccCc--cccchheeeccchhcccccccchhhH--HHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 9999864 45679999987200 000 2455666553322 2344444455555555433234477788
Q ss_pred HHHHHHHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC-----CCCeEEE
Q 042445 145 ILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG-----LKDWLRI 219 (246)
Q Consensus 145 ~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-----~~~~iRl 219 (246)
++.++++.+.+.|++. |+..+..+...+++|+++....+ +.+.+.+.|++.||.+..+..++ .+..||+
T Consensus 339 ~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g~-----~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRi 412 (490)
T 2a7v_A 339 QVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGL-----DGARAERVLELVSITANKNTCPGDRSAITPGGLRL 412 (490)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTTC-----CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEE
T ss_pred HHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCCC-----CHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEe
Confidence 8899999999999987 67643333456888888865321 44556778889999998654333 1688999
Q ss_pred Eee------cChHHHHHHHHHHHHHHHH
Q 042445 220 TFA------VEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 220 s~~------~~~~~l~~~~~~l~~~~~~ 241 (246)
+.. .++++++++++.|.++++.
T Consensus 413 g~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 413 GAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp ESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 763 3788999999999888753
No 207
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.71 E-value=4e-16 Score=136.08 Aligned_cols=224 Identities=13% Similarity=-0.018 Sum_probs=141.1
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHc------CCEEEEccccCCccc---CCCCCccccccCCc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKL------GIMVIANEVYGHLAF---GNTPFVSMGVFGSI 68 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~------~~~ii~De~y~~~~~---~~~~~~~~~~~~~~ 68 (246)
|.+++.+.++ ++++|+||||.+.+ +++|.++|+++ |+++++|++|+++.. .+..... +...
T Consensus 193 ~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~---~~~~ 266 (502)
T 3hbx_A 193 QQAVDMVDENTICVAAILGSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWD---FRLP 266 (502)
T ss_dssp HHHHHHCCTTEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCS---TTST
T ss_pred HHHHHHHhhCCEEEEEecCCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccc---cCCC
Confidence 4556666654 67899999999966 88888889998 999999999997652 2211111 1111
Q ss_pred ccEEEEcccccccccCCceEEEEEeeCCCCCcchhhHHHHHHHH-hhh--------c--CCCCchHHHHHHHHHhhchHH
Q 042445 69 VPLLTLGSISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIF-LNI--------S--SDPATFIQGAVPQILEKTEEE 137 (246)
Q Consensus 69 ~~~i~~~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~--------~--~~~~~~~q~~~~~~l~~~~~~ 137 (246)
.-.++..|.+|. ++++.++||+++.+. +.+...... ..+ . ++.+.....+...++......
T Consensus 267 ~~D~v~~s~hK~-l~~p~g~G~~~~~~~-------~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~ 338 (502)
T 3hbx_A 267 LVKSINVSGHKY-GLVYAGIGWVIWRNK-------EDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHE 338 (502)
T ss_dssp TEEEEEEETTTT-TCCCSSCEEEEESSG-------GGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHH
T ss_pred CceEEEECcccc-cCCCCCeEEEEEeCH-------HHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHH
Confidence 223566778898 566678999888763 222111110 010 0 111111222222233321234
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccccCC-CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC---C
Q 042445 138 FFSKIIDILRETADKCCDRLKEIPCITCPKKP-EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG---L 213 (246)
Q Consensus 138 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~---~ 213 (246)
.+.+..+...++++.+.+.|++++++.. ..+ ....++.++++... + -+...+.+.|.++||.+....... .
T Consensus 339 g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~~~~~~v~f~~~~~~--~--~~~~~l~~~L~~~Gi~v~~~~~p~~~~~ 413 (502)
T 3hbx_A 339 GYRNVMENCRENMIVLREGLEKTERFNI-VSKDEGVPLVAFSLKDSS--C--HTEFEISDMLRRYGWIVPAYTMPPNAQH 413 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEE-CSCSSSSSEEEEEESSCS--S--CCHHHHHHHHHTTTCBCCEEECCTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEE-EeCCCCceEEEEEecCCC--c--CCHHHHHHHHHhCCcEEeeccCCcccCC
Confidence 4677778888899999999999977874 333 45567777776421 0 134445667788999875432221 2
Q ss_pred CCeEEEEeec--ChHHHHHHHHHHHHHHHHHhh
Q 042445 214 KDWLRITFAV--EPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 214 ~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~~ 244 (246)
..++|+++.. +.++++.+++.|+++++++.+
T Consensus 414 ~~~lRisv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 414 ITVLRVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4689999994 889999999999999887654
No 208
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.69 E-value=5.3e-16 Score=129.99 Aligned_cols=205 Identities=17% Similarity=0.132 Sum_probs=131.5
Q ss_pred hhhhhhhccc-cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcc-cCCCCCccccccCCcccEEEEccc--
Q 042445 2 ELINQDITRE-FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLA-FGNTPFVSMGVFGSIVPLLTLGSI-- 77 (246)
Q Consensus 2 e~~~~~~~~~-~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~-- 77 (246)
+.+++.++++ -...|+||||...+ +++|.++|+++|+++|+|++|+.+. +++.... .++ .+++.||
T Consensus 114 ~~l~~~i~~~~~~v~~~~~~G~~~~---~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~---~~~----di~~~Sf~~ 183 (367)
T 3nyt_A 114 QLLEAAITPRTKAIIPVSLYGQCAD---FDAINAIASKYGIPVIEDAAQSFGASYKGKRSC---NLS----TVACTSFFP 183 (367)
T ss_dssp GGTGGGCCTTEEEECCBCGGGCCCC---HHHHHHHHHHTTCCBEEECTTTTTCEETTEETT---SSS----SEEEEECCT
T ss_pred HHHHHhcCcCCcEEEeeCCccChhh---HHHHHHHHHHcCCEEEEECccccCCeECCeecc---CCC----CEEEEECCC
Confidence 4566666554 11128899996654 8899999999999999999998543 3332211 122 3778887
Q ss_pred ccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhh-------------cCCCCchHHHHHHHHHhhchHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNI-------------SSDPATFIQGAVPQILEKTEEEFFSKIID 144 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 144 (246)
+|.++++|. .|++++++. ++.+.++..... ++.++++..+++...+.. +++..+
T Consensus 184 ~K~l~~~g~-gg~~~~~~~-------~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~-----~~~~~~ 250 (367)
T 3nyt_A 184 SAPLGCYGD-GGAIFTNDD-------ELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEI-----FEEEIA 250 (367)
T ss_dssp TSSSCCSSC-CEEEEESCH-------HHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHT-----HHHHHH
T ss_pred CCcCCCcCc-eeEEEeCCH-------HHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHH-----HHHHHH
Confidence 899887676 899998653 777777765331 235666666666555542 445555
Q ss_pred HHHHHHHHHHHHhhcCCCCccccCCCCc----eEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcC--------
Q 042445 145 ILRETADKCCDRLKEIPCITCPKKPEGS----MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG-------- 212 (246)
Q Consensus 145 ~~~~~~~~l~~~L~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-------- 212 (246)
+.+++++.+.+.|+++ ++.....+.++ +.+.+.++ +.+.+.+.|.++||.+.++....
T Consensus 251 ~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~ 320 (367)
T 3nyt_A 251 LRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD---------NRESVQASLKAAGVPTAVHYPIPLNKQPAVA 320 (367)
T ss_dssp HHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS---------SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGC
T ss_pred HHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC---------CHHHHHHHHHHCCCceeccCCCccccChhhh
Confidence 6667777888888876 34322222221 22333332 34455667888999998765311
Q ss_pred -------C-----CCeEEEEeec--ChHHHHHHHHHHHHHH
Q 042445 213 -------L-----KDWLRITFAV--EPSALENGLGRMKAFY 239 (246)
Q Consensus 213 -------~-----~~~iRls~~~--~~~~l~~~~~~l~~~~ 239 (246)
. .+.+|+++.. ++++++..++.|.+.-
T Consensus 321 ~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~~ 361 (367)
T 3nyt_A 321 DEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNLE 361 (367)
T ss_dssp CTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC--
T ss_pred ccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 0 4678998884 8899999888887653
No 209
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.69 E-value=2.1e-16 Score=136.37 Aligned_cols=203 Identities=11% Similarity=0.087 Sum_probs=129.5
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
+.++||||||.+.+ +++|.++|+++|+++++|++|+.+..+-.+. ....+....+ +++.|++|.+ +++.++||+
T Consensus 236 v~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~-~~~~~~~~~D-~~~~s~hK~~-~~p~g~G~l 309 (456)
T 2z67_A 236 LSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLEK-LKKAFKYRVD-AVVSSSDKNL-LTPIGGGLV 309 (456)
T ss_dssp EEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHH-HHHHHTSCCS-EEEEEHHHHH-CCCSSCEEE
T ss_pred EEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhhHH-HHHhhCCCCC-EEEEcCCCCc-CCCCCeEEE
Confidence 57899999999965 8899999999999999999999776421000 1111111112 5678899974 555899999
Q ss_pred EeeCCCCCcchhhHHHHHHHHhhhcCCCC-chHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC---CCcccc
Q 042445 92 VTSDPNGILQDSGIVDSIKIFLNISSDPA-TFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIP---CITCPK 167 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~ 167 (246)
++.+. ++++.+......+...+ .+.+.++...+ ....+++..+...++++.+.+.|++++ |+. +.
T Consensus 310 ~~~~~-------~~~~~l~~~~~g~~~~~~~~~~~aal~~l---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~-v~ 378 (456)
T 2z67_A 310 YSTDA-------EFIKEISLSYPGRASATPVVNTLVSLLSM---GSKNYLELVKNQKNSKKLLDELLNDLSKKTGGK-FL 378 (456)
T ss_dssp EESCH-------HHHHHHHTTSCSCBCSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCC-BC
T ss_pred EEcCH-------HHHhhcCcCCCCCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCE-ec
Confidence 99542 67776643211111111 22333333333 245678888889999999999998874 655 34
Q ss_pred CCCCceEEEEEeccccccCCCChHHHHHHHHHhcCe---EEe------cCCCcCC--CCeEEEEeec--ChHHHHHHHHH
Q 042445 168 KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESV---IVL------PGITVGL--KDWLRITFAV--EPSALENGLGR 234 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~v~------pg~~f~~--~~~iRls~~~--~~~~l~~~~~~ 234 (246)
.|. .++++.+.... ...++ .+.|.++|| .+. +|..|.. .+++|+|++. +++++++++++
T Consensus 379 ~~~--~~v~~~~~~~~-----~~~~l-~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~ 450 (456)
T 2z67_A 379 DVE--SPIASCISVNS-----DPVEI-AAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSK 450 (456)
T ss_dssp CCC--CSSEEEEECSS-----CHHHH-HHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHH
T ss_pred CCC--CeEEEEEeccc-----HHHHH-HHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHH
Confidence 555 55565662111 02344 445667765 343 2334333 5799999983 89999999999
Q ss_pred HHHHH
Q 042445 235 MKAFY 239 (246)
Q Consensus 235 l~~~~ 239 (246)
|++++
T Consensus 451 L~~~~ 455 (456)
T 2z67_A 451 LEKIL 455 (456)
T ss_dssp HHTC-
T ss_pred HHHHh
Confidence 98754
No 210
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.67 E-value=1.6e-15 Score=130.15 Aligned_cols=196 Identities=18% Similarity=0.147 Sum_probs=122.8
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEcc--c-cCCcccCCCCCccccccCCcccEEEEccccccc----ccC
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANE--V-YGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRG----IVP 84 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De--~-y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~----~~~ 84 (246)
++++| ||||.+.+ +++|.++|+++|+++++|- . |..+. ....++. + +++.| +|.| ++.
T Consensus 201 ~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~~-------~~~~~g~--D-~~~~s-~kk~~~~~~~~ 265 (438)
T 1wyu_A 201 VVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLSLGVLK-------PPGAYGA--D-IAVGD-GQSLGLPMGFG 265 (438)
T ss_dssp EEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTBC-------CHHHHTC--S-EEEEE-CTTTTCCCGGG
T ss_pred EEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhhccCcC-------CCccCCC--C-EEEEC-CcccCCCccCC
Confidence 78889 99999985 8999999999999999652 2 32211 1111221 2 44444 5543 355
Q ss_pred CceEEEEEeeCCCCCcchhhHHHHHHHH-------------------------h--hhcCCC---CchHHHHHHHHHhhc
Q 042445 85 GLRLGWLVTSDPNGILQDSGIVDSIKIF-------------------------L--NISSDP---ATFIQGAVPQILEKT 134 (246)
Q Consensus 85 g~r~G~i~~~~~~~~~~~~~~~~~l~~~-------------------------~--~~~~~~---~~~~q~~~~~~l~~~ 134 (246)
|.++||+++++ ++++.+... . ..+.+. +.+...++..++...
T Consensus 266 Gp~~G~l~~~~--------~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~ 337 (438)
T 1wyu_A 266 GPHFGFLATKK--------AFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAAL 337 (438)
T ss_dssp CSCCEEEEECG--------GGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHH
T ss_pred CCCeeEEEEcH--------HHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHh
Confidence 66899999987 554443110 0 011122 111121122224432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEE--ecCCCcC
Q 042445 135 EEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV--LPGITVG 212 (246)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v--~pg~~f~ 212 (246)
....+++..+...++++.+.+.|++++|+.. ..+. .+|.++.+.... +..++.. .|.++||.+ .++.+|+
T Consensus 338 ~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~-~~~~~~~~~~~~-----~~~~~~~-~L~~~gi~v~~~~~~~~~ 409 (438)
T 1wyu_A 338 GPEGLREVALKSVEMAHKLHALLLEVPGVRP-FTPK-PFFNEFALALPK-----DPEAVRR-ALAERGFHGATPVPREYG 409 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTTCEE-CSCS-SBCSEEEEECSS-----CHHHHHH-HHHHTTCCCCEECCTTSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-CCCC-CeEEEEEEeCCC-----CHHHHHH-HHHHCCceeccccccccC
Confidence 3456788888999999999999999888874 3332 444433343211 2445544 555789998 6776664
Q ss_pred CCCeEEEEeec--ChHHHHHHHHHHHHHH
Q 042445 213 LKDWLRITFAV--EPSALENGLGRMKAFY 239 (246)
Q Consensus 213 ~~~~iRls~~~--~~~~l~~~~~~l~~~~ 239 (246)
++++|+|+.. +.++++++++.|++++
T Consensus 410 -~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 410 -ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp -SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred -CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 7899999993 8899999999988764
No 211
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.67 E-value=6e-16 Score=133.10 Aligned_cols=197 Identities=10% Similarity=0.024 Sum_probs=117.1
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCC-cccCCCCCccccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGH-LAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++| ||||.+++ +++|.++|++||+++|+||+|+. +.+.+. ..+....+. -+++.|++|.++ ++.++||
T Consensus 151 ~~~~~-n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~~g~---Di~~~S~~K~l~-~~~g~g~ 221 (446)
T 2x3l_A 151 VLTYP-NYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLNYQA---DYVVQSFHKTLP-ALTMGSV 221 (446)
T ss_dssp EEESS-CTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGGGTC---SEEEECHHHHSS-SCTTCEE
T ss_pred EEECC-CCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHHcCC---CEEEECCccccc-cccccEE
Confidence 66776 77999988 78999999999999999999996 334443 222222332 288999999532 3345799
Q ss_pred EEeeCCCCCcchhhHHHHHHHHhh-h-cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccC
Q 042445 91 LVTSDPNGILQDSGIVDSIKIFLN-I-SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKK 168 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 168 (246)
+++++. .. + ...+..... . .++++.....++..++........++..+..++.++.+.+. ++.. ..
T Consensus 222 l~~~~~--~i---~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~-~~ 289 (446)
T 2x3l_A 222 LYIHKN--AP---Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----GFEM-LQ 289 (446)
T ss_dssp EEEETT--CT---T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----TCEE-EE
T ss_pred EEEcCC--cC---C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----CCEE-Cc
Confidence 999882 11 2 233433222 1 22344443333333332100000111333333334444333 5543 33
Q ss_pred CCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEe-cCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 169 PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL-PGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
+.++.++|+.++.. +..+ +.+.|.++||.+. +| .+++|++++. +++++ ++++.|.++++++
T Consensus 290 ~~~~~~l~i~~~~~------~~~~-l~~~L~~~GI~v~~~g-----~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 290 VDDPLKLLIKYEGF------TGHD-IQNWFMNAHIYLELAD-----DYQALAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp CSSTTEEEEECTTS------CHHH-HHHHHHHTTEEESEEC-----SSCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred CCCCeEEEEEeCCc------CHHH-HHHHHHHCCCEEEecC-----CCEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 44556788877521 2444 4555667799987 44 3789999985 77888 9999998887654
No 212
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.65 E-value=9.6e-15 Score=127.81 Aligned_cols=212 Identities=12% Similarity=0.055 Sum_probs=133.5
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCc-cccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFV-SMGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
++++|+||||.+.+ +++|.++|+++|+++++|++|+.+......+. .+..+. ..-+++.|++|.+++| .++|+
T Consensus 264 v~~~~~n~tG~i~~---l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~ 337 (515)
T 2jis_A 264 SATSGTTVLGAFDP---LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSA 337 (515)
T ss_dssp EEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEE
T ss_pred EEeCCCCCCCCccC---HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeE
Confidence 78899999999876 88999999999999999999998876543222 122221 2237788999997655 57999
Q ss_pred EEeeCCCCCcchhh--HHHHHHH----Hh-h--------hc---------CCCCchHHHHHHHHHhhchHHHHHHHHHHH
Q 042445 91 LVTSDPNGILQDSG--IVDSIKI----FL-N--------IS---------SDPATFIQGAVPQILEKTEEEFFSKIIDIL 146 (246)
Q Consensus 91 i~~~~~~~~~~~~~--~~~~l~~----~~-~--------~~---------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 146 (246)
+++.+ + +++.... +. . .. .....+.+.++.+++. ...+++..+..
T Consensus 338 l~~~~--------~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg---~~g~~~~~~~~ 406 (515)
T 2jis_A 338 LLLQD--------TSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG---DQGLERRIDQA 406 (515)
T ss_dssp EEESC--------CSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred EEEeC--------hHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh---HHHHHHHHHHH
Confidence 99987 4 4443211 11 0 00 0111333444444443 34577788888
Q ss_pred HHHHHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCC--CCh-HH-------HHHHHHHhcCeEEecCCCc-CCCC
Q 042445 147 RETADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI--NSD-ME-------FALKLAKEESVIVLPGITV-GLKD 215 (246)
Q Consensus 147 ~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~-~~-------~~~~ll~~~gi~v~pg~~f-~~~~ 215 (246)
.++++.+.+.|++++++..+.+|..+.+.+..++.. +++. ..+ .+ .+...+.+.|+.+...... +..+
T Consensus 407 ~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~ 485 (515)
T 2jis_A 407 FVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPS-LRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGN 485 (515)
T ss_dssp HHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGG-GTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEE
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCcc-ccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceE
Confidence 999999999999988887544555555444322321 1110 001 11 1344566778655321111 1257
Q ss_pred eEEEEee---cChHHHHHHHHHHHHHHHH
Q 042445 216 WLRITFA---VEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 216 ~iRls~~---~~~~~l~~~~~~l~~~~~~ 241 (246)
++|++++ .++++++++++.|++++++
T Consensus 486 ~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 486 FFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp EEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 8999994 3899999999999887643
No 213
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.61 E-value=2.4e-14 Score=125.12 Aligned_cols=216 Identities=11% Similarity=0.021 Sum_probs=133.5
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCc-cccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFV-SMGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
+.++|+||||.+ +++++|.++|++||+++++|++|+........+. .+.... .--.++.+.+|.++.| ..+|+
T Consensus 253 v~~~~~~~~G~v---d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~--~aDsv~~~~hK~l~~p-~g~g~ 326 (511)
T 3vp6_A 253 NATAGTTVYGAF---DPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSA 326 (511)
T ss_dssp EEEBSCSSSCCB---CCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEE
T ss_pred EEecCCCCCccc---ccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCc--cCCEEEECcccccCCC-cCeEE
Confidence 788999999998 4599999999999999999999997665332221 111111 1125567899998766 67899
Q ss_pred EEeeCCCCCcchhhHHHHHHHHh-hhcC------------------CCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 042445 91 LVTSDPNGILQDSGIVDSIKIFL-NISS------------------DPATFIQGAVPQILEKTEEEFFSKIIDILRETAD 151 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~~-~~~~------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 151 (246)
+++.+. .++....... .+.. ...+.....+..++.......+++..++..++++
T Consensus 327 l~~~~~-------~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~ 399 (511)
T 3vp6_A 327 ILVKEK-------GILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAE 399 (511)
T ss_dssp EEESST-------THHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCH-------HHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 988774 5555543211 1100 0001122223333332245678888999999999
Q ss_pred HHHHHhhcCCCCcccc--CCCCceEEEEEeccccccCCCCh----------HHHHHHHHHhcCeEEecCCCcCC-CCeEE
Q 042445 152 KCCDRLKEIPCITCPK--KPEGSMFVMVKLNYSLLEGINSD----------MEFALKLAKEESVIVLPGITVGL-KDWLR 218 (246)
Q Consensus 152 ~l~~~L~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~pg~~f~~-~~~iR 218 (246)
.+.+.|+++|++..+. .|..+.+.| ++.+..+++..++ ...+.+.|.++|+.+........ .+++|
T Consensus 400 ~l~~~L~~~pg~~l~~~~~p~~~~v~f-~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lR 478 (511)
T 3vp6_A 400 YLYAKIKNREEFEMVFNGEPEHTNVCF-WYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFR 478 (511)
T ss_dssp HHHHHHHSCTTEEESSSSCCSSSCEEE-EECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEE
T ss_pred HHHHHHhcCCCEEEEecCCCCeEEEEE-EEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEE
Confidence 9999999988887544 466565444 3433222111000 12345566677765543111111 35799
Q ss_pred EEee-c--ChHHHHHHHHHHHHHHHH
Q 042445 219 ITFA-V--EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 219 ls~~-~--~~~~l~~~~~~l~~~~~~ 241 (246)
+++. . +.++++.+++.|++.-++
T Consensus 479 i~~~~~~~t~~di~~ll~~i~~~~~~ 504 (511)
T 3vp6_A 479 MVISNPAATQSDIDFLIEEIERLGQD 504 (511)
T ss_dssp ECCCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 9995 2 788899999888876543
No 214
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.59 E-value=6.5e-14 Score=120.03 Aligned_cols=208 Identities=13% Similarity=0.061 Sum_probs=125.2
Q ss_pred hhhhhhhccc----ccc-CCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcc
Q 042445 2 ELINQDITRE----FSD-FQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~-~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s 76 (246)
+.+++.++++ +++ +|+|| .++++|.++|+++|+++|+|++|+.+.... . ..++...+ +++.|
T Consensus 149 ~~l~~~i~~~~~~v~~~~~~g~~-------~~~~~i~~l~~~~~~~li~D~a~~~g~~~~-~----~~~~~~~d-~~~~s 215 (437)
T 3bb8_A 149 SLIEAAVSDKTKAIMIAHTLGNL-------FDLAEVRRVADKYNLWLIEDCCDALGSTYD-G----KMAGTFGD-IGTVS 215 (437)
T ss_dssp GGHHHHCCTTEEEEEEECGGGCC-------CCHHHHHHHHHHHTCEEEEECTTCTTCEET-T----EETTSSSS-EEEEE
T ss_pred HHHHHhcCCCCeEEEEeCCCCCh-------hcHHHHHHHHHHcCCEEEEECccccCceEC-C----eecccccC-EEEEE
Confidence 4555555543 443 45555 468999999999999999999999543221 1 11221112 67788
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHH-HHHhhh----------------------------------------
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSI-KIFLNI---------------------------------------- 115 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l-~~~~~~---------------------------------------- 115 (246)
|+|.++++|.+.|++++++ +.+..+ ......
T Consensus 216 ~~~~k~l~~g~gg~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 287 (437)
T 3bb8_A 216 FYPAKHITMGEGGAVFTQS--------AELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGY 287 (437)
T ss_dssp CSTTSSSCCSSCEEEEESC--------HHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCC
T ss_pred CcCCcCCCCCCeEEEEeCC--------HHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCc
Confidence 9888888999999999987 554433 221110
Q ss_pred cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC----Cc--eEEEEEeccccccCCCC
Q 042445 116 SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPE----GS--MFVMVKLNYSLLEGINS 189 (246)
Q Consensus 116 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~g--~~~~~~~~~~~~~~~~~ 189 (246)
...++++...++...++. +.+..+..+++++.+.+.|++++++..+.... .+ .|++ .++... +.
T Consensus 288 ~~~~~~~~aa~~l~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~-- 357 (437)
T 3bb8_A 288 NLKITDMQAACGLAQLER-----IEEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPI-TLKEDS--GV-- 357 (437)
T ss_dssp BCCCBHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEE-EECGGG--SS--
T ss_pred ccCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEE-EECCcC--cC--
Confidence 001234444444444442 23344444677788888998876654221110 12 2333 233210 11
Q ss_pred hHHHHHHHHHhcCeEEecCCCcCC------------------------CCeEEEEeec--ChHHHHHHHHHHHHHHH
Q 042445 190 DMEFALKLAKEESVIVLPGITVGL------------------------KDWLRITFAV--EPSALENGLGRMKAFYD 240 (246)
Q Consensus 190 ~~~~~~~ll~~~gi~v~pg~~f~~------------------------~~~iRls~~~--~~~~l~~~~~~l~~~~~ 240 (246)
+.+.+...|.++||.++++..... .+.+|+++.. ++++++.+++.|.++++
T Consensus 358 ~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 358 SRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp CHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 344556677789999988754110 1248999885 89999999999988764
No 215
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.59 E-value=2e-14 Score=124.82 Aligned_cols=210 Identities=10% Similarity=-0.019 Sum_probs=133.0
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCcc-ccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVS-MGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
+.+.++|+||.+ +++++|.++|++||+++++|.+|+.+.+....+.. +..+.. .. .+..+.+|.++.| .-+|+
T Consensus 246 v~~~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~-aD-si~~~~hK~l~~p-~g~g~ 319 (481)
T 4e1o_A 246 CATLGTTGVCAF---DCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEY-AD-SFTFNPSKWMMVH-FDCTG 319 (481)
T ss_dssp EEEBSCTTTCCB---CCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGG-CS-EEEECHHHHSSCC-SSCEE
T ss_pred EEecCCCCCcCc---CCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCccc-CC-EEEEChHHhcCCC-CceEE
Confidence 677888999987 45999999999999999999999976543221211 111211 12 4556899997766 45677
Q ss_pred EEeeCCCCCcchhhHHHHHHHH-hhhc---------------C----CCCchHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 042445 91 LVTSDPNGILQDSGIVDSIKIF-LNIS---------------S----DPATFIQGAVPQILEKTEEEFFSKIIDILRETA 150 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~~~l~~~-~~~~---------------~----~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 150 (246)
+++.+. ..+...... ..+. . ....+.+.++...+ ....+++..+...+++
T Consensus 320 l~~~~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~---g~~g~~~~~~~~~~~a 389 (481)
T 4e1o_A 320 FWVKDK-------YKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSF---GVKNLQAHVRHGTEMA 389 (481)
T ss_dssp EEESBH-------HHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred EEEeCH-------HHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHh---HHHHHHHHHHHHHHHH
Confidence 777662 333221111 0000 0 11233334443333 3456778888889999
Q ss_pred HHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcC-eEEecCCCcCCCCeEEEEeec---ChH
Q 042445 151 DKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEES-VIVLPGITVGLKDWLRITFAV---EPS 226 (246)
Q Consensus 151 ~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g-i~v~pg~~f~~~~~iRls~~~---~~~ 226 (246)
+.+.+.|++++++.. ..+.....++++++.... .+.++... +.+.| +.+.|+. .....++|+++.. +++
T Consensus 390 ~~l~~~L~~~~g~~~-~~~~~~~~v~f~~~~~~~----~~~~l~~~-L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~ 462 (481)
T 4e1o_A 390 KYFESLVRNDPSFEI-PAKRHLGLVVFRLKGPNS----LTENVLKE-IAKAGRLFLIPAT-IQDKLIIRFTVTSQFTTRD 462 (481)
T ss_dssp HHHHHHHHTCTTEEC-CSCCCSSEEEEEESSCHH----HHHHHHHH-HHHHCSSBCEEEE-ETTEEEEEEECCCTTCCHH
T ss_pred HHHHHHHhcCCCeEE-ecCCceeEEEEEeCCchH----HHHHHHHH-HHhCCeEEEEeeE-ECCEEEEEEEeCCCCCCHH
Confidence 999999999988884 344456667777753210 13444444 55556 5555433 2335789999873 689
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 042445 227 ALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 227 ~l~~~~~~l~~~~~~~~~ 244 (246)
++++++++|+++.+++.+
T Consensus 463 di~~~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 463 DILRDWNLIRDAATLILS 480 (481)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999887653
No 216
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.59 E-value=3.4e-14 Score=122.53 Aligned_cols=204 Identities=13% Similarity=0.079 Sum_probs=135.3
Q ss_pred Ccc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEEEeeCCCC
Q 042445 20 VGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVTSDPNG 98 (246)
Q Consensus 20 tG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i~~~~~~~ 98 (246)
.|+ .++++++++|.++|++||+++|.||+..+|...|..+ ....++-... +-+++|.++..++.+|.+++++
T Consensus 249 gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PD---i~t~~K~l~gG~~Pl~av~~~~--- 321 (473)
T 4e3q_A 249 GGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTW-GCVTYDFTPD---AIISSKNLTAGFFPMGAVILGP--- 321 (473)
T ss_dssp TTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSC-HHHHTTCCCS---EEEECGGGGTTSSCCEEEEECH---
T ss_pred CCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchh-HHHhcCCCCC---hHHhcccccCCCCCcccccccH---
Confidence 454 4567899999999999999999999999998776544 2222322222 4457799765559999999999
Q ss_pred CcchhhHHHHHHHH--------hhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh---cCCCCcccc
Q 042445 99 ILQDSGIVDSIKIF--------LNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLK---EIPCITCPK 167 (246)
Q Consensus 99 ~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~---~~~~~~~~~ 167 (246)
++.+.+... +..+++.||++.+++.+.|+...++. ..+..++.-+++.+.|+ +.+.+.. +
T Consensus 322 -----~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~~-v 392 (473)
T 4e3q_A 322 -----ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEG---LAENVRRLAPRFEERLKHIAERPNIGE-Y 392 (473)
T ss_dssp -----HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHTTSTTEEE-E
T ss_pred -----HHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCeeE-E
Confidence 888887643 23455889999999999888533221 22222333344444443 3344432 2
Q ss_pred CCCCceEEEEEeccccc-----cCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHHHHHHHH
Q 042445 168 KPEGSMFVMVKLNYSLL-----EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGRMKAFYD 240 (246)
Q Consensus 168 ~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~l~~~~~ 240 (246)
. .-|+++-+++..... +........+...+.++|+++.|.. +.+||+.. .+++++++++++|.++++
T Consensus 393 R-G~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-----~~i~l~PPL~it~~eid~~~~~l~~al~ 466 (473)
T 4e3q_A 393 R-GIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG-----QSVVLCPPFILTEAQMDEMFDKLEKALD 466 (473)
T ss_dssp E-EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred e-ecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 2 235666666633210 0001224456677889999998743 67898866 399999999999999998
Q ss_pred HHhhc
Q 042445 241 RHAEK 245 (246)
Q Consensus 241 ~~~~~ 245 (246)
+..++
T Consensus 467 ~v~ae 471 (473)
T 4e3q_A 467 KVFAE 471 (473)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87643
No 217
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.59 E-value=2.5e-14 Score=123.94 Aligned_cols=213 Identities=13% Similarity=0.060 Sum_probs=132.5
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCcc-ccccCCcccEEEEcccccccccCCceEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVS-MGVFGSIVPLLTLGSISKRGIVPGLRLGW 90 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~g~r~G~ 90 (246)
+.+.++|+||.+- ++++|.++|++||+++++|++|+........+.. +..+.. --.+..+++|.++.| ..+|+
T Consensus 239 ~~~~~~t~~G~~~---~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~--~Ds~~~~~hK~l~~p-~g~g~ 312 (475)
T 3k40_A 239 VVTLGTTNSCAFD---YLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIES--ADSFNFNPHKWMLVN-FDCSA 312 (475)
T ss_dssp EEEBSCTTTCCBC---CHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEE
T ss_pred EEEecCCCCcCcC---CHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCccc--CCEEEECchhccCCC-CceEE
Confidence 6678889999984 5999999999999999999999875432211111 112211 125667899986554 45788
Q ss_pred EEeeCCCCCcchhhHH-HHHHH---Hh------------hhcCCC----CchHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 042445 91 LVTSDPNGILQDSGIV-DSIKI---FL------------NISSDP----ATFIQGAVPQILEKTEEEFFSKIIDILRETA 150 (246)
Q Consensus 91 i~~~~~~~~~~~~~~~-~~l~~---~~------------~~~~~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 150 (246)
+++.+. ..+ +.+.. +. ..+... ..+.+.++...+ ....+++..+...+++
T Consensus 313 l~~~~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~---g~~g~~~~~~~~~~~a 382 (475)
T 3k40_A 313 MWLKDP-------SWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLY---GVENLQAHIRRHCNFA 382 (475)
T ss_dssp EEESSG-------GGC---------------------------CCCGGGTHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred EEEeCH-------HHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHH---hHHHHHHHHHHHHHHH
Confidence 888763 221 11111 00 000001 122333333333 3456778888899999
Q ss_pred HHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec---ChHH
Q 042445 151 DKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV---EPSA 227 (246)
Q Consensus 151 ~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~---~~~~ 227 (246)
+.+.+.|++++++..+. +.....++++++.... ...++..++.++.++.+.|+... ...++|+++.. ++++
T Consensus 383 ~~l~~~L~~~~g~~l~~-~~~~~iv~f~~~~~~~----~~~~l~~~L~~~g~~~~~~~~~~-g~~~lR~~~~~~~tt~~d 456 (475)
T 3k40_A 383 KQFGDLCVADSRFELAA-EINMGLVCFRLKGSNE----RNEALLKRINGRGHIHLVPAKIK-DVYFLRMAICSRFTQSED 456 (475)
T ss_dssp HHHHHHHHHSTTEEESS-CCBTTEEEEEESSCHH----HHHHHHHHHHHHTSCBCEEEEET-TEEEEEEECCCTTCCHHH
T ss_pred HHHHHHHhcCCCEEEec-CCceEEEEEEeCCchH----HHHHHHHHHHhCCcEEEEeeEEC-CEEEEEEEeCCCCCCHHH
Confidence 99999999998888543 4445566666653210 13445555444444455554333 36789999873 7899
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q 042445 228 LENGLGRMKAFYDRHAEKQ 246 (246)
Q Consensus 228 l~~~~~~l~~~~~~~~~~~ 246 (246)
+++++++|+++.+++.+.|
T Consensus 457 i~~~~~~i~~~~~~~~~~~ 475 (475)
T 3k40_A 457 MEYSWKEVSAAADEMEQEQ 475 (475)
T ss_dssp HHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHhccC
Confidence 9999999999998876543
No 218
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.59 E-value=5.5e-14 Score=118.85 Aligned_cols=199 Identities=11% Similarity=0.097 Sum_probs=120.7
Q ss_pred CCCccCCChhhHHHHHHHHHHcCCEEEEccccC-CcccCCCCCccccccCCcccEEEEcccccccccCCceEEEEEeeCC
Q 042445 18 FHVGSGFSGSFVSPIAETAKKLGIMVIANEVYG-HLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVTSDP 96 (246)
Q Consensus 18 NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i~~~~~ 96 (246)
||||.. .++++|.++|+++|+++|+||+|+ ++.+.+....+ +. + +.+.|+||..+++|.|+||+++++.
T Consensus 130 ~~~G~~---~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~~---~-~~~~s~s~~K~l~~~~~G~~~~~~~ 199 (394)
T 1o69_A 130 HLYGNA---AKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGT---FG---E-FGVYSYNGNKIITTSGGGMLIGKNK 199 (394)
T ss_dssp CGGGCC---CCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS---SS---S-EEEEECCTTSSSCCSSCEEEEESCH
T ss_pred CCCCCh---hhHHHHHHHHHHcCCEEEEECcCcccceeCCccccc---cc---C-cEEEEEeCCccCCCCCceEEEECCH
Confidence 489964 569999999999999999999999 55554321111 11 1 4555664443455678999999632
Q ss_pred CCCcchhhHHHHHHHHhhhcC-C--------------CCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 042445 97 NGILQDSGIVDSIKIFLNISS-D--------------PATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIP 161 (246)
Q Consensus 97 ~~~~~~~~~~~~l~~~~~~~~-~--------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 161 (246)
++++.++.....+. . .+++...++... ..++++..+..+++++.+.+.|+++
T Consensus 200 -------~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-----l~~l~~~~~~~~~~~~~l~~~L~~~- 266 (394)
T 1o69_A 200 -------EKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQ-----MEVLEQRVLKKREIYEWYKEFLGEY- 266 (394)
T ss_dssp -------HHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHH-----HTTHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred -------HHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 78888876533221 1 122222222111 2346667788888999999999876
Q ss_pred CCccccCCC----Cce-EEEEEecccc-------------ccC--CCChHHHHHHHHHhcCeEEecCCCcC--C---C--
Q 042445 162 CITCPKKPE----GSM-FVMVKLNYSL-------------LEG--INSDMEFALKLAKEESVIVLPGITVG--L---K-- 214 (246)
Q Consensus 162 ~~~~~~~~~----~g~-~~~~~~~~~~-------------~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~--~---~-- 214 (246)
+.. ..+. +++ .+++.++... ..+ ..-+.+.+.+.|.++||.+++|..+. . .
T Consensus 267 -~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~ 344 (394)
T 1o69_A 267 -FSF-LDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGA 344 (394)
T ss_dssp -EEC-CCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTC
T ss_pred -ccc-cCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhcc
Confidence 432 2221 233 3666676320 000 00034556667788999999985331 0 1
Q ss_pred -------------CeEEEEee--cChHHHHHHHHHHHHHHHH
Q 042445 215 -------------DWLRITFA--VEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 215 -------------~~iRls~~--~~~~~l~~~~~~l~~~~~~ 241 (246)
+.+|+... .++++++.+++.|+++++.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 345 KAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp EEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred CCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 33444444 2889999999999887653
No 219
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.58 E-value=1.5e-13 Score=124.16 Aligned_cols=218 Identities=11% Similarity=0.066 Sum_probs=128.7
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCc-ccCCCC--Cccccc--cCC-cccEEEEcccccccccCC
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHL-AFGNTP--FVSMGV--FGS-IVPLLTLGSISKRGIVPG 85 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~-~~~~~~--~~~~~~--~~~-~~~~i~~~s~sK~~~~~g 85 (246)
++++| ||+|.+.+ +++|.++|+++|+++++||+|..+ .+++.. ..++.. ++. ..+++++.|++|.++ |
T Consensus 286 iv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g 359 (730)
T 1c4k_A 286 VIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA--G 359 (730)
T ss_dssp EEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS--C
T ss_pred EEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCC--C
Confidence 78889 79999976 889999999999999999999853 343211 112211 122 336799999999854 4
Q ss_pred ceE-EEEEeeCCC-----CCcchhhHHHHHHHHhh--hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 042445 86 LRL-GWLVTSDPN-----GILQDSGIVDSIKIFLN--ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRL 157 (246)
Q Consensus 86 ~r~-G~i~~~~~~-----~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 157 (246)
.+. |++++++.. ... + ...+..... .+++++....+++..++.........+..+.+.++.+.+++.|
T Consensus 360 ~~~gg~I~v~~~~l~g~~~~i---~-~~~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L 435 (730)
T 1c4k_A 360 FSQTSQIHKKDSHIKGQLRYC---D-HKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKL 435 (730)
T ss_dssp CTTCEEEEEECGGGTTSTTCC---C-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecchhhcCccccc---C-HHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 444 556555420 001 0 123333322 1225555555554444442122233445566777778888888
Q ss_pred hc-CCCCccccCCC------------------------------------Cc-eE-----EEEEecc-----ccccCCCC
Q 042445 158 KE-IPCITCPKKPE------------------------------------GS-MF-----VMVKLNY-----SLLEGINS 189 (246)
Q Consensus 158 ~~-~~~~~~~~~~~------------------------------------~g-~~-----~~~~~~~-----~~~~~~~~ 189 (246)
++ ++|+..+.+.. .+ ++ +.+.++. ..+.+..-
T Consensus 436 ~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~ 515 (730)
T 1c4k_A 436 IKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGV 515 (730)
T ss_dssp HHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCC
T ss_pred hhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCC
Confidence 77 66765322110 12 22 3444421 00001011
Q ss_pred hHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHHh
Q 042445 190 DMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDRHA 243 (246)
Q Consensus 190 ~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~~ 243 (246)
+...+.+.|.++||.+.+.. .+.+|++++. +.++++.+++.|.++.+++.
T Consensus 516 ~~~~l~~~L~e~GI~v~~~~----~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 516 PATIVANYLRDHGIIPEKSD----LNSILFLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp CHHHHHHHHHHTTCCCSEEC----SSEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcEEEECC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 44555667778899876532 5789999885 78899999999998876653
No 220
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.56 E-value=7.2e-14 Score=120.03 Aligned_cols=206 Identities=17% Similarity=0.149 Sum_probs=132.9
Q ss_pred Ccc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEEEeeCCCC
Q 042445 20 VGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVTSDPNG 98 (246)
Q Consensus 20 tG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i~~~~~~~ 98 (246)
.|. .++++++++|.++|++||+++|.||+..++...|..+ ....++-... +-+++|.+ ..|+.+|.+++.+
T Consensus 239 gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~-a~e~~gv~PD---ivt~gK~l-ggg~P~~av~~~~--- 310 (456)
T 4atq_A 239 GGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWF-AVDHEGVVPD---IITMAKGI-AGGLPLSAITGRA--- 310 (456)
T ss_dssp TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCS---EEEECGGG-GTTSSCEEEEEEH---
T ss_pred CCccccchhhhHHHHHHHhhcCCceEecccccccCCccccc-cccccCCCCc---hhhhhhcc-cCcCCceeeEecH---
Confidence 344 5667899999999999999999999999987776543 3333332223 44567995 5789999999998
Q ss_pred CcchhhHHHHHHHH-hhhcCCCCchHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCC-----CCccccCCCC
Q 042445 99 ILQDSGIVDSIKIF-LNISSDPATFIQGAVPQILEKTEEE-FFSKIIDILRETADKCCDRLKEIP-----CITCPKKPEG 171 (246)
Q Consensus 99 ~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~-----~~~~~~~~~~ 171 (246)
++.+.+... +..+++.||++.+++.+.|+...++ .+++.++.-....+.+.+..++++ -+.. +. .-
T Consensus 311 -----~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~-VR-G~ 383 (456)
T 4atq_A 311 -----DLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGD-IR-GR 383 (456)
T ss_dssp -----HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEE-EE-EE
T ss_pred -----HHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEE-ee-ec
Confidence 888777544 4456688999999999999854322 222222221112222222222232 1111 11 23
Q ss_pred ceEEEEEeccccccCC-CChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 172 SMFVMVKLNYSLLEGI-NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 172 g~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
|+++-+++....-... .+-...+...+.++|+++.++... .+.|||+... +++++++++++|.++++.+
T Consensus 384 Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~--~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 384 GAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTY--GNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp TTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 6777777753321000 012334566677899998874322 5789999774 8999999999999999864
No 221
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.54 E-value=1.7e-15 Score=138.64 Aligned_cols=206 Identities=13% Similarity=0.100 Sum_probs=135.4
Q ss_pred cCCCccC-CChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCC-ceEEEEEee
Q 042445 17 VFHVGSG-FSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPG-LRLGWLVTS 94 (246)
Q Consensus 17 ~NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-~r~G~i~~~ 94 (246)
.+..|.. ++++++++|.++|++||+++|+||++.++...|..+ ....++-... +.++||.++. | +++|+++++
T Consensus 605 qg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PD---iitlsK~L~g-G~~Plgav~~~ 679 (831)
T 4a0g_A 605 HGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPD---IACFAKLLTG-GMVPLAVTLAT 679 (831)
T ss_dssp ETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCS---EEEECGGGGT-TSSCCEEEEEC
T ss_pred ccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCc---EEEEeccccc-CccCcEEEEEC
Confidence 3666665 478899999999999999999999999988777544 3323332223 3379999765 6 899999999
Q ss_pred CCCCCcchhhHHHHHHHH-------hhhcCCCCchHHHHHHHHHhhchH-HHHHHHH---HHHHH-HHHHHHHHhhcCCC
Q 042445 95 DPNGILQDSGIVDSIKIF-------LNISSDPATFIQGAVPQILEKTEE-EFFSKII---DILRE-TADKCCDRLKEIPC 162 (246)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~---~~~~~-~~~~l~~~L~~~~~ 162 (246)
+ ++++.+... ...+++.||++++++.+.|+...+ ...++.. +.+++ ..+.+.+.+++.+.
T Consensus 680 ~--------~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~ 751 (831)
T 4a0g_A 680 D--------AVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSA 751 (831)
T ss_dssp H--------HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTT
T ss_pred H--------HHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 8 888877542 234568899999999998874211 1111111 11111 01234455666665
Q ss_pred CccccCCCCceEEEEEeccccc-cCC-CChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHHHHHH
Q 042445 163 ITCPKKPEGSMFVMVKLNYSLL-EGI-NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGRMKAF 238 (246)
Q Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~-~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~l~~~ 238 (246)
+.. +. .-|+++.+++....- .+. ......+...+.++||.++|+ .+.+||+.. .+++++++++++|.++
T Consensus 752 v~~-vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~ 824 (831)
T 4a0g_A 752 VQR-VV-VIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKR 824 (831)
T ss_dssp EEE-EE-EETTEEEEEEC---------CHHHHHHHHHHHHTTEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cee-Ee-ecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 542 23 346667677743210 000 012344566677899999875 378999965 4999999999999999
Q ss_pred HHHH
Q 042445 239 YDRH 242 (246)
Q Consensus 239 ~~~~ 242 (246)
++++
T Consensus 825 l~~l 828 (831)
T 4a0g_A 825 LGEF 828 (831)
T ss_dssp HTTT
T ss_pred HHHh
Confidence 8765
No 222
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.54 E-value=1.4e-13 Score=117.59 Aligned_cols=159 Identities=14% Similarity=0.148 Sum_probs=105.5
Q ss_pred hhhhhhhccc----ccc-CCcCCCccCCChhhHHHHHHHHHH--cCCEEEEccccCCcccCCCCCccccccCCcccEEEE
Q 042445 2 ELINQDITRE----FSD-FQVFHVGSGFSGSFVSPIAETAKK--LGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTL 74 (246)
Q Consensus 2 e~~~~~~~~~----~~~-~p~NPtG~~~~~~~~~~l~~~~~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~ 74 (246)
|.+++.++++ +++ +||||+|.+.+.+++++|+++|++ +|+++|+||+|+.+.++..+. .++ ..+++
T Consensus 156 e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~----~~g---~Di~~ 228 (431)
T 3ht4_A 156 EAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC----HVG---ADLMA 228 (431)
T ss_dssp HHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG----GTT---CSEEE
T ss_pred HHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc----ccC---CeEEE
Confidence 4455556544 444 699999999999999999999999 999999999999887654321 111 23899
Q ss_pred ccccccccc-CCceEEEEEeeCCCCCcchhhHHHHHHHHhhh---cC--CCCchHHHHHHHHHhhchHHHHHHHHHHHHH
Q 042445 75 GSISKRGIV-PGLRLGWLVTSDPNGILQDSGIVDSIKIFLNI---SS--DPATFIQGAVPQILEKTEEEFFSKIIDILRE 148 (246)
Q Consensus 75 ~s~sK~~~~-~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~---~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 148 (246)
+|+||.+++ .+...||+++++ ++++.++..... +. +.+.....++...+. .+....+...+
T Consensus 229 ~S~sK~lgg~~~~~GG~v~~~~--------~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~ 295 (431)
T 3ht4_A 229 GSLIKNPGGGIVKTGGYIVGKE--------QYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFF-----LAPHVAGQALK 295 (431)
T ss_dssp EETTSGGGTTTCSSCEEEEECH--------HHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHH-----HHHHHHHHHHH
T ss_pred cCccccCCCCCCCceEEEEecH--------HHHHHHHHHhccCCcccccCccHHHHHHHHhHhh-----hHHHHHHHHHH
Confidence 999999654 223339999988 999988775321 11 122222333333333 24556677788
Q ss_pred HHHHHHHHhhcCCCCccc---cCCCCceEEEEEecc
Q 042445 149 TADKCCDRLKEIPCITCP---KKPEGSMFVMVKLNY 181 (246)
Q Consensus 149 ~~~~l~~~L~~~~~~~~~---~~~~~g~~~~~~~~~ 181 (246)
+++.+.+.|+++ ++..+ ..+..+..+.+.++.
T Consensus 296 ~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~l~~ 330 (431)
T 3ht4_A 296 GAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQFDD 330 (431)
T ss_dssp HHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEECCC
T ss_pred HHHHHHHHHHhC-cCEecCCCCCCCccEEEEEEeCC
Confidence 888999999886 33321 112334456666653
No 223
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.53 E-value=1.5e-13 Score=117.23 Aligned_cols=154 Identities=16% Similarity=0.078 Sum_probs=103.8
Q ss_pred hhhhhhhc--cc----cccC----CcCCCccCCChhhHHHHHHHHHH--cCCEEEEccccCCcccCCCCCccccccCCcc
Q 042445 2 ELINQDIT--RE----FSDF----QVFHVGSGFSGSFVSPIAETAKK--LGIMVIANEVYGHLAFGNTPFVSMGVFGSIV 69 (246)
Q Consensus 2 e~~~~~~~--~~----~~~~----p~NPtG~~~~~~~~~~l~~~~~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 69 (246)
|.+++.++ ++ ++++ |+||||.+ .++++|+++|++ +|+++++|++|..+.+...+. .. +
T Consensus 165 e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~----~~---g 234 (427)
T 3i16_A 165 EEIEKVLKEDESITLVHIQRSTGYGWRRALLI---EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPT----DV---G 234 (427)
T ss_dssp HHHHHHHHTCTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGG----GG---T
T ss_pred HHHHHHhhCCCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHHHhCCCCEEEEECCCccccccCCcc----cc---C
Confidence 45556665 33 5666 88898865 679999999999 999999999999876433221 11 2
Q ss_pred cEEEEcccccccccCC-ceEEEEEeeCCCCCcchhhHHHHHHHHhh---hcCCCCc-hH-HHHHHHHHhhchHHHHHHHH
Q 042445 70 PLLTLGSISKRGIVPG-LRLGWLVTSDPNGILQDSGIVDSIKIFLN---ISSDPAT-FI-QGAVPQILEKTEEEFFSKII 143 (246)
Q Consensus 70 ~~i~~~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~-~~-q~~~~~~l~~~~~~~~~~~~ 143 (246)
..++++|+||.++++| .+.||+++++ +++++++.... ....+++ +. ...+.+.+ ..+..+.
T Consensus 235 aDiv~~S~sK~lgg~g~~~gG~i~~~~--------~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl-----~~~~~r~ 301 (427)
T 3i16_A 235 ADLIAGSLIKNIGGGIAPTGGYLAGTK--------DCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGL-----FLAPHIS 301 (427)
T ss_dssp CSEEEEETTSGGGTTTCCSCEEEEECH--------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHH
T ss_pred CeEEEecCcccCCCCCCceEEEEEECH--------HHHHHHHHhcccCccCccCCccHHHHHHHHHHH-----HHHHHHH
Confidence 3389999999998877 6779999988 99999987422 2212233 22 22232333 3356677
Q ss_pred HHHHHHHHHHHHHhhcCCCCccccCCCCce-----EEEEEecc
Q 042445 144 DILRETADKCCDRLKEIPCITCPKKPEGSM-----FVMVKLNY 181 (246)
Q Consensus 144 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~-----~~~~~~~~ 181 (246)
+...+++..+.+.|++++ +.+ .|..+. .+.+.+..
T Consensus 302 ~~~~~~a~~la~~L~~~g-~~V--~p~~~~~~~~~i~~i~l~~ 341 (427)
T 3i16_A 302 MEALKGAILCSRIMELAG-FEV--MPKYDEKRSDIIQSIKFND 341 (427)
T ss_dssp HHHHHHHHHHHHHHHHTT-CEE--ESCTTSCCSSSCEEEECSS
T ss_pred HHHHHHHHHHHHHHHhCC-Cee--cCCCCCCCccEEEEEEECC
Confidence 788899999999999884 442 333333 66666653
No 224
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.53 E-value=1.4e-13 Score=116.83 Aligned_cols=139 Identities=14% Similarity=0.038 Sum_probs=96.6
Q ss_pred hhhhhhhccc----cccC----CcCCCccCCChhhHHHHHHHHHH--cCCEEEEccccCCcccCCCCCccccccCCcccE
Q 042445 2 ELINQDITRE----FSDF----QVFHVGSGFSGSFVSPIAETAKK--LGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPL 71 (246)
Q Consensus 2 e~~~~~~~~~----~~~~----p~NPtG~~~~~~~~~~l~~~~~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 71 (246)
|.+++.++++ ++++ |+||||.+ .++++|+++|++ +|+++++|++|..+.+...+. .. +..
T Consensus 150 e~l~~ai~~~tklV~i~~s~g~p~nptg~v---~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~----~~---g~D 219 (409)
T 3jzl_A 150 PRIAKKMTPKTKMIGIQRSRGYADRPSFTI---EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPP----EV---GAD 219 (409)
T ss_dssp HHHHHHCCTTEEEEEEECSCTTSSSCCCCH---HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSG----GG---TCS
T ss_pred HHHHHhccCCCeEEEEECCCCCCCCCcCcc---ccHHHHHHHHHhhCCCCEEEEeCCcccccccCCcc----cc---CCe
Confidence 4556666544 6666 99999876 569999999999 999999999999876433221 11 234
Q ss_pred EEEcccccccccCC-ceEEEEEeeCCCCCcchhhHHHHHHHHhh---h--cCCCCchHHHHHHHHHhhchHHHHHHHHHH
Q 042445 72 LTLGSISKRGIVPG-LRLGWLVTSDPNGILQDSGIVDSIKIFLN---I--SSDPATFIQGAVPQILEKTEEEFFSKIIDI 145 (246)
Q Consensus 72 i~~~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~---~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 145 (246)
++++|+||.++++| .+.||+++++ ++++.++.... . ..+.......++.+.+. .+..++++
T Consensus 220 iv~~S~sK~lgg~~~~~GG~v~~~~--------~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~-----~~~~r~~~ 286 (409)
T 3jzl_A 220 IIAGSLIKNPGGGLAKTGGYIAGKE--------ALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFF-----LAPHVTAQ 286 (409)
T ss_dssp EEEEETTSGGGTTTCSSCEEEEECH--------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHH
T ss_pred EEEECccccCCccCCceEEEEEeCH--------HHHHHHHHHhccccccccccccHHHHHHHHHHHh-----hHHHHHHH
Confidence 89999999998776 4469999987 99999887432 1 11222222333333333 35566777
Q ss_pred HHHHHHHHHHHhhcCCCCc
Q 042445 146 LRETADKCCDRLKEIPCIT 164 (246)
Q Consensus 146 ~~~~~~~l~~~L~~~~~~~ 164 (246)
..+++..+.+.|+++ |+.
T Consensus 287 ~~~~a~~la~~L~~~-g~~ 304 (409)
T 3jzl_A 287 AIKGARFTAAMLAEF-GVE 304 (409)
T ss_dssp HHHHHHHHHHHHHHT-TCE
T ss_pred HHHHHHHHHHHHHhC-CCc
Confidence 888999999999988 444
No 225
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.51 E-value=3.2e-13 Score=113.64 Aligned_cols=196 Identities=11% Similarity=0.053 Sum_probs=123.1
Q ss_pred CcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCccc-CCCCCccc-cccCCcccEEEEccc--ccccccCCceEEEE
Q 042445 16 QVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAF-GNTPFVSM-GVFGSIVPLLTLGSI--SKRGIVPGLRLGWL 91 (246)
Q Consensus 16 p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~-~~~~~~~~~i~~~s~--sK~~~~~g~r~G~i 91 (246)
|+||+|...+ +++|.++|+ +|+++|+|++|+.+.. .+. .+ ..+. + +.+.|| +|.+++ | +.|++
T Consensus 135 ~~~~~G~~~~---~~~i~~la~-~~~~vi~D~a~a~g~~~~~~---~~g~~~~--d--~~~~S~~~~K~l~~-g-~gG~~ 201 (377)
T 3ju7_A 135 PYATFGSWMN---LEEYEELEK-KGVPVVVDAAPGFGLMNGGM---HYGQDFS--G--MIIYSFHATKPFGI-G-EGGLI 201 (377)
T ss_dssp CBCGGGBCCC---CHHHHHHHH-TTCCBEEECTTCTTCEETTE---ETTTTCS--S--EEEEECBTTSSSCC-B-SCEEE
T ss_pred EECCCCCccC---HHHHHHHHh-cCCEEEEECCCccCCeECCE---eccCCCC--c--EEEEECCCCCcCCC-C-CcEEE
Confidence 7799999876 678888889 9999999999986542 221 11 0111 1 445554 699875 4 67888
Q ss_pred EeeCCCCCcchhhHHHHHHHHhhh-------------cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 042445 92 VTSDPNGILQDSGIVDSIKIFLNI-------------SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLK 158 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~~-------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 158 (246)
++++. ++.++++..... .+.++.+..+++...+. .++...++.+++++.+.+.|+
T Consensus 202 ~~~~~-------~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-----~l~~~~~~~~~~~~~~~~~L~ 269 (377)
T 3ju7_A 202 YSKNE-------EDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMK-----KWDDKLKERTRISEWYKQLLQ 269 (377)
T ss_dssp EESCH-------HHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHH
T ss_pred EECCH-------HHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhc
Confidence 88763 777777765431 23455665555544444 355566666777778888888
Q ss_pred cCCCCccccCCCCc-----eEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCC--cC------------C------
Q 042445 159 EIPCITCPKKPEGS-----MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT--VG------------L------ 213 (246)
Q Consensus 159 ~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~--f~------------~------ 213 (246)
+++++.....+..+ .|+.+.++.. .+.+.+.+.|.++||.+..++. +. .
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 343 (377)
T 3ju7_A 270 SNGLMKKGWQLQKTEAVIQQFMPILCPEE------VRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKI 343 (377)
T ss_dssp HTTTTTTTCBCCCCSCBCCSSEEEECCTT------SCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHH
T ss_pred CCCCccccccCCCCCcceEEEEEEEeCCh------hhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHH
Confidence 77654211222221 2334444432 1356667788899999987652 11 0
Q ss_pred -CCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 214 -KDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 214 -~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
.+.+|+.+.. ++++++..++.|.+++...
T Consensus 344 ~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 344 AKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp HHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred HhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 4678999884 8999999999998887653
No 226
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.50 E-value=2.3e-13 Score=116.61 Aligned_cols=202 Identities=10% Similarity=0.037 Sum_probs=122.5
Q ss_pred Ccc-CCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEEEeeCCCC
Q 042445 20 VGS-GFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVTSDPNG 98 (246)
Q Consensus 20 tG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i~~~~~~~ 98 (246)
.|. .++++++++|.++|++||+++|.||++++ ..+..+ ....++-... +-+++|.+ ..|+.+|.+++.+
T Consensus 233 ~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~-a~e~~gv~PD---i~t~gK~l-ggG~Piga~~~~~--- 302 (454)
T 4ao9_A 233 SGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHG-LANKLGIRSD---LTTLGKYI-GGGMSFGAFGGRA--- 302 (454)
T ss_dssp TTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTC-HHHHHTCCCS---EEEEEGGG-GTTSSCEEEEECH---
T ss_pred CCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCcccc-chhccCCCCc---EEEecccc-CCCCcceeeeeHH---
Confidence 454 45678999999999999999999999984 333222 1122222222 44678996 5679999999998
Q ss_pred CcchhhHHHHHHHH-----hhhcCCCCchHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCCc
Q 042445 99 ILQDSGIVDSIKIF-----LNISSDPATFIQGAVPQILEKTE-EEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEGS 172 (246)
Q Consensus 99 ~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 172 (246)
++++.+... ...+++.||++.+++.+.|+... +...++..+.-...++.+.+..++.+-+. -+... |
T Consensus 303 -----ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~-~vrg~-G 375 (454)
T 4ao9_A 303 -----DVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAM-QFTGI-G 375 (454)
T ss_dssp -----HHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSC-EEEEE-T
T ss_pred -----HHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCE-EEeee-c
Confidence 888877532 22355789999999999887533 33333333332233333333333333121 12222 4
Q ss_pred eEEEEEeccccccCC----C-C--hHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHHHHHHHHHhh
Q 042445 173 MFVMVKLNYSLLEGI----N-S--DMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 173 ~~~~~~~~~~~~~~~----~-~--~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l~~~~~~~~~ 244 (246)
.++.+.+........ . + -...+...+.++||++.|.. ++.++...++++++++++.|++++.++..
T Consensus 376 ~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~------~~~~s~~~T~~dId~~l~al~~~l~~~~a 448 (454)
T 4ao9_A 376 SLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRG------FVVLSLPLTDADIDRYVAAIGSFIGGHGA 448 (454)
T ss_dssp TEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTC------EEECCTTCCHHHHHHHHHHHHHHHHHSGG
T ss_pred eEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCC------CEEEeCCCCHHHHHHHHHHHHHHHHhccc
Confidence 444455533211100 0 1 11233445668999988743 34455556999999999999999988653
No 227
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.49 E-value=7.6e-13 Score=120.32 Aligned_cols=215 Identities=8% Similarity=-0.009 Sum_probs=121.1
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcc-cCCC--CCccccc--cC-CcccEEEEcccccccccCC
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLA-FGNT--PFVSMGV--FG-SIVPLLTLGSISKRGIVPG 85 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~-~~~~--~~~~~~~--~~-~~~~~i~~~s~sK~~~~~g 85 (246)
++++| ||+|.+.+ +++|.++|++||+++++||+|..+. +++. +..++.. .+ ...+++++.|++|.+ +|
T Consensus 317 il~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g 390 (755)
T 2vyc_A 317 VVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NA 390 (755)
T ss_dssp EEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSS--SC
T ss_pred EEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECccccc--cC
Confidence 77889 89999976 8899999999999999999998543 3321 2223212 22 245788999999985 45
Q ss_pred ce-EEEEEeeCCCCCcchhhHHHHHHHHhh-h-cCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042445 86 LR-LGWLVTSDPNGILQDSGIVDSIKIFLN-I-SSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPC 162 (246)
Q Consensus 86 ~r-~G~i~~~~~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 162 (246)
.+ .|++++++..... + ...+..... . +++++....+++..++........++..+.+.++.+.+++.|+++++
T Consensus 391 ~~~g~~i~~~~~~~~i---~-~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 391 LSQASYIHVREGRGAI---N-FSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp CTTCEEEEEECCBTCC---C-HHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeeeeeecCccccc---C-HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44 4667776620011 1 123333221 1 23555555555444444211111233344444455555555544333
Q ss_pred ---------CccccCC------------------------------------------CCce------EEEEEecccccc
Q 042445 163 ---------ITCPKKP------------------------------------------EGSM------FVMVKLNYSLLE 185 (246)
Q Consensus 163 ---------~~~~~~~------------------------------------------~~g~------~~~~~~~~~~~~ 185 (246)
+..+.+. ..+. -+.+.++.....
T Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~ 546 (755)
T 2vyc_A 467 EFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGED 546 (755)
T ss_dssp HHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTT
T ss_pred cccccccceeeccCchhccccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCC
Confidence 2211110 0221 223333321111
Q ss_pred ------CCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHHH
Q 042445 186 ------GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 186 ------~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~~ 242 (246)
|+ +...+.+.|+++||.+... ..+.+|++++. +.++++.+++.|.++.+.+
T Consensus 547 G~~~~~g~--~~~~l~~~L~~~gI~~e~~----~~~~v~~~~~~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 547 GELEETGV--PAALVTAWLGRHGIVPTRT----TDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp SSBCSSCC--CHHHHHHHHHTTTCCCSEE----CSSEEEEECCTTCCTTTTHHHHHHHHHHHHHH
T ss_pred CCccccCC--cHHHHHHHHHHCCCEEeec----CCCeEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 12 3355566778899877442 26889999986 7888999888888886654
No 228
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.47 E-value=1.3e-12 Score=111.32 Aligned_cols=153 Identities=12% Similarity=0.102 Sum_probs=101.5
Q ss_pred hhhhhhhc--cc----cccC----CcCCCccCCChhhHHHHHHHHHH--cCCEEEEccccCCcccCCCCCccccccCCcc
Q 042445 2 ELINQDIT--RE----FSDF----QVFHVGSGFSGSFVSPIAETAKK--LGIMVIANEVYGHLAFGNTPFVSMGVFGSIV 69 (246)
Q Consensus 2 e~~~~~~~--~~----~~~~----p~NPtG~~~~~~~~~~l~~~~~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 69 (246)
|.+++.++ ++ ++++ |+||||.+ .++++|+++|++ +|+++++|++|..+.+...+. .. +
T Consensus 165 e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~----~~---g 234 (427)
T 3hvy_A 165 NTVKEELKKDDSIKLIHIQRSTGYGWRKSLRI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPT----DV---G 234 (427)
T ss_dssp HHHHHHHHHCTTEEEEEEESSCCSSSSCCCCH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGG----GG---T
T ss_pred HHHHHHhhCCCCCEEEEEECCCCCCCCccccH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCCCc----cc---C
Confidence 45566565 33 6666 88998765 679999999999 899999999999776443221 11 1
Q ss_pred cEEEEcccccccccCC-ceEEEEEeeCCCCCcchhhHHHHHHHHhh---hcCCCCc-hH-HHHHHHHHhhchHHHHHHHH
Q 042445 70 PLLTLGSISKRGIVPG-LRLGWLVTSDPNGILQDSGIVDSIKIFLN---ISSDPAT-FI-QGAVPQILEKTEEEFFSKII 143 (246)
Q Consensus 70 ~~i~~~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~-~~-q~~~~~~l~~~~~~~~~~~~ 143 (246)
..++++|+||.++++| .+.||+++++ +++++++.... .....++ +. ...+.+.+. .+..+.
T Consensus 235 aDiv~~S~sK~lgg~g~~~GG~i~~~~--------~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~-----~~~~r~ 301 (427)
T 3hvy_A 235 ADIIAGSLIKNIGGGIATTGGYIAGKE--------EYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLF-----MAPHVT 301 (427)
T ss_dssp CSEEEEETTSGGGTTTCCSCEEEEECH--------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHH
T ss_pred CeEEEECCcccccccccceEEEEEECH--------HHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHh-----HHHHHH
Confidence 3389999999998766 4569999987 99999987532 2111222 22 333333333 345667
Q ss_pred HHHHHHHHHHHHHhhcCCCCccccCCCCc-----eEEEEEec
Q 042445 144 DILRETADKCCDRLKEIPCITCPKKPEGS-----MFVMVKLN 180 (246)
Q Consensus 144 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~g-----~~~~~~~~ 180 (246)
++..+++..+.+.|++++ +.. .|..+ ..+.+.+.
T Consensus 302 ~~~~~~a~~la~~L~~~g-~~V--~p~~~~~~~~li~~~~l~ 340 (427)
T 3hvy_A 302 IEAVKGAVFCARIMELAG-FDV--LPKYNDKRTDIIQAIKFN 340 (427)
T ss_dssp HHHHHHHHHHHHHHHHTT-CEE--ESCTTSCCSSSEEEEECS
T ss_pred HHHHHHHHHHHHHHHhCC-Cee--cCCCCCCCceEEEEEeCC
Confidence 778889999999999874 442 23222 25666665
No 229
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.37 E-value=2.1e-11 Score=102.73 Aligned_cols=205 Identities=14% Similarity=0.076 Sum_probs=119.0
Q ss_pred hhhhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEE-Ecc
Q 042445 2 ELINQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLT-LGS 76 (246)
Q Consensus 2 e~~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~-~~s 76 (246)
+.+++.++++ +++ |++|.. .++++|.++|+++|+++|+|++|+.+.... . ..++....+.. ...
T Consensus 119 ~~l~~~i~~~~~~v~~~---~~~g~~---~~~~~i~~l~~~~~~~li~D~a~~~g~~~~-~----~~~g~~~~~~~~s~~ 187 (390)
T 3b8x_A 119 ESLKEAVTDSTKAILTV---NLLGNP---NNFDEINKIIGGRDIILLEDNCESMGATFN-N----KCAGTFGLMGTFSSF 187 (390)
T ss_dssp HHHHHHCCTTEEEEEEE---CGGGCC---CCHHHHHHHHTTSCCEEEEECTTCTTCEET-T----EETTSSSSEEEEECC
T ss_pred HHHHHHhCcCCeEEEEE---CCccCh---hhHHHHHHHHHHcCCEEEEECcCcccCEEC-C----cccccccceEEEEcc
Confidence 3455555543 443 345554 469999999999999999999999543221 1 11221111111 112
Q ss_pred cccccccCCceEEEEEeeCCCCCcchhhHHHHHHHHhhhc--------------------------------CCCCchHH
Q 042445 77 ISKRGIVPGLRLGWLVTSDPNGILQDSGIVDSIKIFLNIS--------------------------------SDPATFIQ 124 (246)
Q Consensus 77 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~--------------------------------~~~~~~~q 124 (246)
.+|.+++ | +.|++++++. ++.+.++.....+ +.++++..
T Consensus 188 ~~k~~~~-g-~gG~~~~~~~-------~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a 258 (390)
T 3b8x_A 188 YSNHIAT-M-EGGCIVTDDE-------EIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSG 258 (390)
T ss_dssp TTSSSCS-S-SCEEEEESCH-------HHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHH
T ss_pred CCCCCcc-C-CceEEEeCCH-------HHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHH
Confidence 3455432 3 3499998762 4555555432110 11444544
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCC-CCce-EEEEEeccccccCCCChHHHHHHHHHhcC
Q 042445 125 GAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKP-EGSM-FVMVKLNYSLLEGINSDMEFALKLAKEES 202 (246)
Q Consensus 125 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~g~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 202 (246)
.++...+ +++++..+..+++++.+.+.|++++++.....+ ..++ .+++.++... +. +.+.+.+.|.++|
T Consensus 259 a~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~--~~~~l~~~L~~~g 329 (390)
T 3b8x_A 259 AIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDS--GV--IRKQLVENLNSAG 329 (390)
T ss_dssp HHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTS--CC--CHHHHHHHHHHTT
T ss_pred HHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcC--cc--cHHHHHHHHHHCC
Confidence 4443333 356777888888999999999988777632222 2233 3555665310 11 3445566677899
Q ss_pred eEEecC---CCcCC----------------------CCeEEEEeec--ChHHHHHHHHHH
Q 042445 203 VIVLPG---ITVGL----------------------KDWLRITFAV--EPSALENGLGRM 235 (246)
Q Consensus 203 i~v~pg---~~f~~----------------------~~~iRls~~~--~~~~l~~~~~~l 235 (246)
|.+.+. ..+.. .+.+|+++.. ++++++.+++.|
T Consensus 330 I~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 330 IECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp BCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred CCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 999872 21111 1469999885 889999888765
No 230
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.29 E-value=1.1e-10 Score=97.71 Aligned_cols=204 Identities=13% Similarity=0.113 Sum_probs=128.0
Q ss_pred ccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEEE
Q 042445 13 SDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLV 92 (246)
Q Consensus 13 ~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i~ 92 (246)
+++-.|.||+..+. +|+++|+++++|-+.+....+ ..+..+ + +++.|.-|.+|.+| +|+++
T Consensus 158 ~~h~et~tG~~~pi--------i~~~~~~~~~vD~~q~~g~~~----id~~~~---~--~~~~s~~K~~gp~G--~g~l~ 218 (377)
T 3e77_A 158 YCANETVHGVEFDF--------IPDVKGAVLVCDMSSNFLSKP----VDVSKF---G--VIFAGAQKNVGSAG--VTVVI 218 (377)
T ss_dssp EESEETTTTEECSS--------CCCCTTCCEEEECTTTTTSSC----CCGGGC---S--EEEEEGGGTTSCTT--CEEEE
T ss_pred EeCccCchheEchh--------hhccCCCEEEEEcccccCCCC----Cchhhc---C--EEEEecccccCCCc--cEEEE
Confidence 33344677999885 367889999999988753321 122222 2 46678899998888 67887
Q ss_pred eeCCCCCcc-----hhhHHH--HHHHHhhhcCCCCchHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 042445 93 TSDPNGILQ-----DSGIVD--SIKIFLNISSDPATFIQGAVPQILEKTEEE-FFSKIIDILRETADKCCDRLKEIPCIT 164 (246)
Q Consensus 93 ~~~~~~~~~-----~~~~~~--~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~ 164 (246)
..+. ... .+.+++ ..........+++....+++..+++...+. -++...++.++..+.+.+.|++++|+.
T Consensus 219 ~~~~--~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~ 296 (377)
T 3e77_A 219 VRDD--LLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY 296 (377)
T ss_dssp EETT--SCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSE
T ss_pred EcHH--HHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 7762 100 001111 011101112245666666677777643334 478888899999999999999988775
Q ss_pred ccc-CC--CCceEEEEEeccccccCCCChH-HHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHH
Q 042445 165 CPK-KP--EGSMFVMVKLNYSLLEGINSDM-EFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALENGLGRMKAF 238 (246)
Q Consensus 165 ~~~-~~--~~g~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~ 238 (246)
... .+ ..+..+.+.++... +. .+. ..+...+.++||.+++|... .+.+|+|+.. ++++++.+++.|+++
T Consensus 297 ~~~~~~~~rs~~ivsf~~~~~~--~~-~~~~~~~l~~l~~~Gi~~~~g~~~--~g~iRiS~~~~~t~edId~l~~al~~~ 371 (377)
T 3e77_A 297 VCPVEPQNRSKMNIPFRIGNAK--GD-DALEKRFLDKALELNMLSLKGHRS--VGGIRASLYNAVTIEDVQKLAAFMKKF 371 (377)
T ss_dssp ECCSCGGGBCSSEEEEEESSTT--CC-HHHHHHHHHHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred ecCCCHHHcCCcEEEEEcCCCC--Cc-hhHHHHHHHHHHHCCcEEeCCCCc--CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 211 11 23444555565311 00 011 22344456889999887632 5679999985 899999999999999
Q ss_pred HHHH
Q 042445 239 YDRH 242 (246)
Q Consensus 239 ~~~~ 242 (246)
++++
T Consensus 372 ~~~~ 375 (377)
T 3e77_A 372 LEMH 375 (377)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 8764
No 231
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.25 E-value=6.3e-10 Score=93.59 Aligned_cols=210 Identities=14% Similarity=0.053 Sum_probs=127.7
Q ss_pred hhhhhhccc----cccCCcCCCccC-CChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEccc
Q 042445 3 LINQDITRE----FSDFQVFHVGSG-FSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSI 77 (246)
Q Consensus 3 ~~~~~~~~~----~~~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 77 (246)
.++..+.++ .+++-.|.||+. .+.+++ . +|+++++|-+.+.... +..+..+ + +.+.|.
T Consensus 158 ~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~i---~-----~g~~~~vDa~qs~g~~----pidv~~~---~--~~~~s~ 220 (386)
T 3qm2_A 158 MREWQLSDNAAYLHYCPNETIDGIAIDETPDF---G-----PEVVVTADFSSTILSA----PLDVSRY---G--VIYAGA 220 (386)
T ss_dssp GGGCCCCTTCSCEEECSEETTTTEECCCCCCC---C-----TTCCEEEECTTTTTSS----CCCGGGC---S--EEEEET
T ss_pred HHHhhcCCCCcEEEEECCcCCcCEecCchhhh---c-----CCCEEEEEcccccCCC----CCCcccc---C--EEEEec
Confidence 344445544 333333666996 554444 2 7999999998875331 1122222 2 456888
Q ss_pred ccccccCCceEEEEEeeCCC-----CCcchhhHHH--HHHHHhhhcCCCCchHHHHHHHHHhhchHH-HHHHHHHHHHHH
Q 042445 78 SKRGIVPGLRLGWLVTSDPN-----GILQDSGIVD--SIKIFLNISSDPATFIQGAVPQILEKTEEE-FFSKIIDILRET 149 (246)
Q Consensus 78 sK~~~~~g~r~G~i~~~~~~-----~~~~~~~~~~--~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~ 149 (246)
-|.+|.+| +|+++..+.- .... .+++ ..........++|.....++..+++...+. -+++..++.++.
T Consensus 221 hK~lGP~G--~g~l~v~~~~~~~~~~~~p--~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l 296 (386)
T 3qm2_A 221 QKNIGPAG--LTLVIVREDLLGKAHESCP--SILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQK 296 (386)
T ss_dssp TTTTCCTT--EEEEEEEGGGCSCCCTTSC--GGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccccCCCc--cEEEEECHHHHhhhcccCC--cHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99998777 8888887620 0000 1111 011111112255666777777777743334 488888899999
Q ss_pred HHHHHHHhhcCCCC-ccccCC--CCceEEEEEeccccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--C
Q 042445 150 ADKCCDRLKEIPCI-TCPKKP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--E 224 (246)
Q Consensus 150 ~~~l~~~L~~~~~~-~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~ 224 (246)
++.+.+.|+++ ++ .....+ .....+.+.++...+ +.++ ...|.++||.+.+|..+ .+.+|+|+.. +
T Consensus 297 ~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~~~-----~~~~-~~~L~~~gI~~~~g~~~--~~~iRiS~~~~~t 367 (386)
T 3qm2_A 297 AELLYGVIDNS-DFYRNDVAQANRSRMNVPFQLADNTL-----DKVF-LEESFAAGLHALKGHRV--VGGMRASIYNAMP 367 (386)
T ss_dssp HHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEESSGGG-----HHHH-HHHHHHTTEECCBCCTT--TCSEEEECCTTSC
T ss_pred HHHHHHHHHHC-CCcccCCCHHHcCceEEEEECCCccc-----cHHH-HHHHHHCCCEEeCCCCC--cCeEEEEcCCCCC
Confidence 99999999987 44 211122 234556666764221 4444 44478899999887654 3569999985 7
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 042445 225 PSALENGLGRMKAFYDRH 242 (246)
Q Consensus 225 ~~~l~~~~~~l~~~~~~~ 242 (246)
+++++.+++.|+++.+++
T Consensus 368 ~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 368 IEGVKALTDFMIDFERRH 385 (386)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999988764
No 232
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.18 E-value=6e-10 Score=92.93 Aligned_cols=195 Identities=15% Similarity=0.118 Sum_probs=128.6
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCccccccCCcccEEEEcccccccccCCceEEEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWL 91 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i 91 (246)
.+++-.|.||+..+. +++ +|+++++|-+.+..... ..+.. .+ +++.|.-|.+|.+| +|++
T Consensus 145 ~~~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~g~~~----id~~~---~d--~~~~s~~K~~gp~G--~g~l 204 (361)
T 3m5u_A 145 YICSNNTIYGTQYQN--------YPK-TKTPLIVDASSDFFSRK----VDFSN---IA--LFYGGVQKNAGISG--LSCI 204 (361)
T ss_dssp EEESEETTTTEECSS--------CCC-CSSCEEEECGGGTTSSC----CCCTT---EE--EEEEETTTTSSCTT--CEEE
T ss_pred EEeCCCCCcceeCCc--------ccc-cCCEEEEEcccccCCCC----CCccc---CC--EEEEechhccCCCc--cEEE
Confidence 334444677998762 233 49999999988753321 11221 22 67778999998777 7888
Q ss_pred EeeCCCCCcchhhHHHHHHH-----------H--hh-hcCCCCchHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHH
Q 042445 92 VTSDPNGILQDSGIVDSIKI-----------F--LN-ISSDPATFIQGAVPQILEKTEEE-FFSKIIDILRETADKCCDR 156 (246)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~-----------~--~~-~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~ 156 (246)
+..+ ++++.+.. . .. ...+++.....++..+++...+. -++...++.++..+.+.+.
T Consensus 205 ~~~~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~ 276 (361)
T 3m5u_A 205 FIRK--------DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYEC 276 (361)
T ss_dssp EEEH--------HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred EEcH--------HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 8887 77666542 1 01 11245666666666666632223 3788888889999999999
Q ss_pred hhcCCCC-ccccCC--CCceEEEEEecc-ccccCCCChHHHHHHHHHhcCeEEecCCCcCCCCeEEEEeec--ChHHHHH
Q 042445 157 LKEIPCI-TCPKKP--EGSMFVMVKLNY-SLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV--EPSALEN 230 (246)
Q Consensus 157 L~~~~~~-~~~~~~--~~g~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~--~~~~l~~ 230 (246)
|++++++ ..+..+ .....+.+.++. ..+ +.+ +...|.++||.+.+|... .+.+|+|+.. +.++++.
T Consensus 277 L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~-----~~~-~~~~L~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~ 348 (361)
T 3m5u_A 277 IDLSNGFYKGHADKKDRSLMNVSFNIAKNKDL-----EPL-FVKEAEEAGMIGLKGHRI--LGGIRASIYNALNLDQVKT 348 (361)
T ss_dssp HHTSTTSEEESSCGGGBCSSEEEEEESSCTTH-----HHH-HHHHHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHH
T ss_pred HHHCCCeeeccCCHHHcCCeEEEEECCCchhh-----hHH-HHHHHHHCCCEEecCCCc--cCeEEEEccCCCCHHHHHH
Confidence 9998766 322222 223455555664 111 333 456778899999887643 3679999985 8999999
Q ss_pred HHHHHHHHHHHH
Q 042445 231 GLGRMKAFYDRH 242 (246)
Q Consensus 231 ~~~~l~~~~~~~ 242 (246)
+++.|+++.+++
T Consensus 349 l~~al~~~~~~~ 360 (361)
T 3m5u_A 349 LCEFMKEFQGKY 360 (361)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999988764
No 233
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.09 E-value=3e-09 Score=95.65 Aligned_cols=209 Identities=12% Similarity=0.024 Sum_probs=114.9
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcc-cCCCC--CccccccC-Cccc-EEEEcccccccccCCc
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLA-FGNTP--FVSMGVFG-SIVP-LLTLGSISKRGIVPGL 86 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~-~~~~~--~~~~~~~~-~~~~-~i~~~s~sK~~~~~g~ 86 (246)
++++| ||+|.+++ +++|.++|++++ +++||+|..+. +++.. ...+. .+ ..+. +++++|++|.++++ -
T Consensus 302 ivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~al~-~g~~aD~vii~~~S~hKtL~gl-t 373 (715)
T 3n75_A 302 VITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAAF-S 373 (715)
T ss_dssp EEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSSTTS-SSCCTTCEEEEEECHHHHSSCC-T
T ss_pred EEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccccCCccccccccc-cCcCCCEEEEEEecccccccCC-C
Confidence 88899 99999997 667777777663 79999998654 43211 11221 11 1234 36799999996542 0
Q ss_pred eEEEEEeeCCCCCcchhhHHHHHHHHhh--hcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC--
Q 042445 87 RLGWLVTSDPNGILQDSGIVDSIKIFLN--ISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPC-- 162 (246)
Q Consensus 87 r~G~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-- 162 (246)
..|++.+++. + ....+..... .++++|.+..+++..++.......-.++++.+.++.+.+++.|+++++
T Consensus 374 qgs~i~v~~~--i-----~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~ 446 (715)
T 3n75_A 374 QASMIHVKGD--V-----NEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTES 446 (715)
T ss_dssp TCEEEEEESC--C-----CHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CeeEEEeCch--h-----hHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 2388888773 1 1223333322 233667777666666654221123344566666777777777665432
Q ss_pred ----CccccC------------C----------CCceE------EEEEecccccc------CCCChHHHHHHHHHhcCeE
Q 042445 163 ----ITCPKK------------P----------EGSMF------VMVKLNYSLLE------GINSDMEFALKLAKEESVI 204 (246)
Q Consensus 163 ----~~~~~~------------~----------~~g~~------~~~~~~~~~~~------~~~~~~~~~~~ll~~~gi~ 204 (246)
+..+.. | ..+.+ +.+.++..... |+ +...+.+.|+++||.
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi--~g~~~~~~L~~~~I~ 524 (715)
T 3n75_A 447 DGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGI--PASIVAKYLDEHGIV 524 (715)
T ss_dssp SSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCC--CHHHHHHHHHHTTCC
T ss_pred ccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCC--cHHHHHHHHHHCCCE
Confidence 121111 0 01111 12222211000 12 344566778888987
Q ss_pred EecCCCcCCCCeEEEEeec--ChHHHHHHHHHHHHHHHH
Q 042445 205 VLPGITVGLKDWLRITFAV--EPSALENGLGRMKAFYDR 241 (246)
Q Consensus 205 v~pg~~f~~~~~iRls~~~--~~~~l~~~~~~l~~~~~~ 241 (246)
+--.. .+.+-+-++. +.+.++.+++.|.++-+.
T Consensus 525 ~E~~d----~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~ 559 (715)
T 3n75_A 525 VEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (715)
T ss_dssp CSEEE----TTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEecC----CCcEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 64322 4555555553 677777777777766543
No 234
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.95 E-value=1.6e-07 Score=79.27 Aligned_cols=198 Identities=15% Similarity=0.057 Sum_probs=130.3
Q ss_pred hHHHHHHHHHHcCCEEEEccccC-CcccCCCCCccccccCCcccEEEEcccccccccCCceEEEEEeeCCCC--------
Q 042445 28 FVSPIAETAKKLGIMVIANEVYG-HLAFGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLVTSDPNG-------- 98 (246)
Q Consensus 28 ~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i~~~~~~~-------- 98 (246)
+++++.++|.+.|+++++|-+|. ++.-++-.+.|+... -|+..|..|.|. |=|-|.|.+.+...
T Consensus 219 d~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~A-----DvVTtTTHKTLr--GPrGG~Il~~~~~~~~~~k~~~ 291 (490)
T 3ou5_A 219 DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHA-----DIVTTTTHKTLR--GARSGLIFYRKGVKAVDPKTGR 291 (490)
T ss_dssp CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTC-----SEEEEESSSTTC--SCSCEEEEEECSEEEECC--CC
T ss_pred CHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccc-----eEEecccccccc--CCCceEEEeccccccccccccc
Confidence 48888899999999999999987 555555444444321 177888999964 55668888765200
Q ss_pred -CcchhhHHHHHHHHhhhcCCCCch--HHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCCceEE
Q 042445 99 -ILQDSGIVDSIKIFLNISSDPATF--IQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIPCITCPKKPEGSMFV 175 (246)
Q Consensus 99 -~~~~~~~~~~l~~~~~~~~~~~~~--~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 175 (246)
... ++.+++...-.++.-.+|. ..++.+.++.+......+...++..+|++.|.+.|.+. |+..+........+
T Consensus 292 ~~~~--~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHlv 368 (490)
T 3ou5_A 292 EIPY--TFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLV 368 (490)
T ss_dssp EEEC--CCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEE
T ss_pred hhHH--HHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceEE
Confidence 000 3566777664433322332 23333334443334556777788889999999999886 66644444556788
Q ss_pred EEEeccccccCCCChHHHHHHHHHhcCeEEe----cCCCcCC-CCeEEEEee------cChHHHHHHHHHHHHHHH
Q 042445 176 MVKLNYSLLEGINSDMEFALKLAKEESVIVL----PGITVGL-KDWLRITFA------VEPSALENGLGRMKAFYD 240 (246)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~~-~~~iRls~~------~~~~~l~~~~~~l~~~~~ 240 (246)
++++....+ +-+.+..+|.+.||.+. |+..-.. ++.|||+.. ..++++++..+.|.+++.
T Consensus 369 LvDl~~~g~-----tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 369 LVDLRPKGL-----DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EEECGGGTC-----CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred EEeccccCC-----CHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 888765432 56677888999999886 4332111 688999855 277889999988888764
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.86 E-value=2.2e-07 Score=78.72 Aligned_cols=205 Identities=13% Similarity=0.112 Sum_probs=117.1
Q ss_pred hhHHHHHHHHHHcCCEEEEccccCCcc-cCCCCCccccccCCcccEEEEcccccccccCCceEEEEE-eeCCCCCcchhh
Q 042445 27 SFVSPIAETAKKLGIMVIANEVYGHLA-FGNTPFVSMGVFGSIVPLLTLGSISKRGIVPGLRLGWLV-TSDPNGILQDSG 104 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g~r~G~i~-~~~~~~~~~~~~ 104 (246)
+++++|.++|++||+++++||+|.... +....+.+...++.- -+++.|..|.+.++ +. |+++ ..+. +
T Consensus 233 ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrA--D~vVqS~HK~llvp-IG-G~ii~~~d~-------e 301 (501)
T 3hl2_A 233 DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRI--DAFVQSLDKNFMVP-VG-GAIIAGFND-------S 301 (501)
T ss_dssp CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCC--CEEEEEHHHHHCCC-SS-CEEEEESCH-------H
T ss_pred ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCC--cEEEecccccceee-cC-ceEEEeCCH-------H
Confidence 469999999999999999999999654 211111122222211 26788899997665 22 4444 4442 6
Q ss_pred HHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC---CCccccCCCCceEEEEEecc
Q 042445 105 IVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIP---CITCPKKPEGSMFVMVKLNY 181 (246)
Q Consensus 105 ~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~ 181 (246)
+++++....+ +...+..+.......+.- ..+.++++.+...++.+.+.+.|+++. |-.....|.-...+-+.+..
T Consensus 302 ~l~~~~~~yP-Gr~S~Spsldl~~tLL~l-Gr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~ 379 (501)
T 3hl2_A 302 FIQEISKMYP-GRASASPSLDVLITLLSL-GSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKT 379 (501)
T ss_dssp HHHHHHHTSC-SCBCSHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTT
T ss_pred HHHHHHHhCC-CCCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccc
Confidence 6666644322 212233333344444443 344456677777778888888887632 22223344344555555543
Q ss_pred ccccCCCChHHHHHHHHHhcCe---EEe-cCC----------CcCC------CCeEEEEee--cChHHHHHHHHHHHHHH
Q 042445 182 SLLEGINSDMEFALKLAKEESV---IVL-PGI----------TVGL------KDWLRITFA--VEPSALENGLGRMKAFY 239 (246)
Q Consensus 182 ~~~~~~~~~~~~~~~ll~~~gi---~v~-pg~----------~f~~------~~~iRls~~--~~~~~l~~~~~~l~~~~ 239 (246)
..-.. ..+...+-..|-.++| -|+ +|. .|+. ..|+-++-+ .+.++++..+++|.+++
T Consensus 380 ~~~~~-~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~ 458 (501)
T 3hl2_A 380 LDEHR-DKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCL 458 (501)
T ss_dssp SCTTT-SCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred ccccc-cccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 21000 1234444445555544 333 344 3433 467777655 48999999999999999
Q ss_pred HHHhhc
Q 042445 240 DRHAEK 245 (246)
Q Consensus 240 ~~~~~~ 245 (246)
.++.++
T Consensus 459 ~~~~~~ 464 (501)
T 3hl2_A 459 KAVRKE 464 (501)
T ss_dssp HHHHC-
T ss_pred HHHHHh
Confidence 988754
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.59 E-value=2e-06 Score=73.21 Aligned_cols=217 Identities=11% Similarity=0.049 Sum_probs=110.8
Q ss_pred cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccCCCCCcccccc--CCcccEEEEcccccccccCCceEE
Q 042445 12 FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFGNTPFVSMGVF--GSIVPLLTLGSISKRGIVPGLRLG 89 (246)
Q Consensus 12 ~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~g~r~G 89 (246)
++.+| +-+| ....+++++|.++|++||+++++|++|+.......+. +-..+ +..| .++.|..|.++.+ ...+
T Consensus 202 Vv~t~-t~~g-~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l-~~~a~~~~~AD--~~v~S~HK~l~a~-~~~~ 275 (450)
T 3bc8_A 202 LHSTT-ACFA-PRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHL-IQQGARVGRID--AFVQSLDKNFMVP-VGGA 275 (450)
T ss_dssp EEEES-SCCT-TBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHH-HHHHHHHSCCC--EEEEEHHHHHSCC-SSCE
T ss_pred EEEEC-CcCC-CceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhH-HHHHhcccCCC--EEEECCccCCCch-hccE
Confidence 66666 3333 1123569999999999999999999999644211111 10111 1111 4667899996443 3445
Q ss_pred EEEeeCCCCCcchhhHHHHHHHHhhhcCCCCchHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC---CCccc
Q 042445 90 WLVTSDPNGILQDSGIVDSIKIFLNISSDPATFIQGAVPQILEKTEEEFFSKIIDILRETADKCCDRLKEIP---CITCP 166 (246)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~ 166 (246)
++...+. +.++.+..... ....+.++.......+.. ..+.+.+..+...+..+.+.+.|++++ +....
T Consensus 276 ~l~~rd~-------~~~~~~~~~~~-g~~s~SpsL~l~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l 346 (450)
T 3bc8_A 276 IIAGFNE-------PFIQDISKMYP-GRASASPSLDVLITLLSL-GCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLL 346 (450)
T ss_dssp EEEESCH-------HHHHHHHHHSC-SCBCSHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBC
T ss_pred EEEecCH-------HHHHHHHHHhh-cCCcccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceec
Confidence 6665442 55655544321 111223344444444443 333344444445566677777776654 55432
Q ss_pred cCCCCceEEEEEeccccccCCCChHHHHHHHHHhcC---eEEec---------------CCCcCC--CCeEEEEeec--C
Q 042445 167 KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEES---VIVLP---------------GITVGL--KDWLRITFAV--E 224 (246)
Q Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g---i~v~p---------------g~~f~~--~~~iRls~~~--~ 224 (246)
..+.-+.-..+.++.-.- .-..+...+.-.+...| .-+.+ |..... ..++-+.++. +
T Consensus 347 ~~~~~~~~~~~~l~~~~~-~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~ 425 (450)
T 3bc8_A 347 QTPHNPISLAMTLKTIDG-HHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMK 425 (450)
T ss_dssp CCTTCSSEEEEECTTTSS-SSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCC
T ss_pred CCccCCCcceeecccccc-cccCCCceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCC
Confidence 222211122222321100 00013333333343444 23321 111111 5677666664 8
Q ss_pred hHHHHHHHHHHHHHHHHHhh
Q 042445 225 PSALENGLGRMKAFYDRHAE 244 (246)
Q Consensus 225 ~~~l~~~~~~l~~~~~~~~~ 244 (246)
.+++++.+++|.+..+++++
T Consensus 426 ~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 426 MQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 89999999999998776654
No 237
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=64.96 E-value=5.2 Score=33.84 Aligned_cols=28 Identities=25% Similarity=0.227 Sum_probs=25.3
Q ss_pred CCCccCCChhhHHHHHHHHHHcCCEEEE
Q 042445 18 FHVGSGFSGSFVSPIAETAKKLGIMVIA 45 (246)
Q Consensus 18 NPtG~~~~~~~~~~l~~~~~~~~~~ii~ 45 (246)
+|.|..||.+++++|++.|+++++.||-
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 4677899999999999999999999984
No 238
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=62.77 E-value=5.2 Score=33.78 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=25.2
Q ss_pred CCCccCCChhhHHHHHHHHHHcCCEEEE
Q 042445 18 FHVGSGFSGSFVSPIAETAKKLGIMVIA 45 (246)
Q Consensus 18 NPtG~~~~~~~~~~l~~~~~~~~~~ii~ 45 (246)
+|.|-.||.+++++|++.|+++|+-||-
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 4667899999999999999999999984
No 239
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=61.31 E-value=10 Score=30.58 Aligned_cols=36 Identities=22% Similarity=0.247 Sum_probs=31.1
Q ss_pred cCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCc
Q 042445 17 VFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHL 52 (246)
Q Consensus 17 ~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~ 52 (246)
+||.|-..+.+++.++++.|+++|+.+++|-.|++.
T Consensus 50 ~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~ 85 (332)
T 1hjs_A 50 VNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDT 85 (332)
T ss_dssp SSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred eCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 578888889899999999999999999999766544
No 240
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=59.02 E-value=7.3 Score=35.13 Aligned_cols=28 Identities=25% Similarity=0.277 Sum_probs=25.6
Q ss_pred hhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.++++++++.|++.|+-||.|-+|.+..
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTA 281 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 5899999999999999999999998654
No 241
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=57.85 E-value=15 Score=29.64 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=30.9
Q ss_pred cCCCccCCChhhHHHHHHHHHHcCCEEEEccccCCc
Q 042445 17 VFHVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHL 52 (246)
Q Consensus 17 ~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~ 52 (246)
+||.|-..+.+...++++.|+++|+.+++|-.|++.
T Consensus 50 v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~ 85 (334)
T 1fob_A 50 VNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDT 85 (334)
T ss_dssp SCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred ECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 477777889999999999999999999999777654
No 242
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=56.19 E-value=8.4 Score=32.51 Aligned_cols=30 Identities=10% Similarity=0.244 Sum_probs=26.8
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
=+.++++++++.|+++|+.||.|-++.+..
T Consensus 74 Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 74 GNEDEFRNMVTRCNNVGVRIYVDAVINHMC 103 (496)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccCcCC
Confidence 367899999999999999999999988754
No 243
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=52.15 E-value=10 Score=35.72 Aligned_cols=28 Identities=25% Similarity=0.277 Sum_probs=25.6
Q ss_pred hhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.++++++++.|+++|+-||.|-+|.+..
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~ 588 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTA 588 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccc
Confidence 5899999999999999999999998655
No 244
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=51.83 E-value=15 Score=30.83 Aligned_cols=30 Identities=20% Similarity=0.109 Sum_probs=26.5
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
-+.++++++++.|+++|+.||.|-++.+..
T Consensus 67 Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 67 GSEREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 357899999999999999999999987554
No 245
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=51.32 E-value=12 Score=31.49 Aligned_cols=30 Identities=10% Similarity=0.224 Sum_probs=26.4
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccCCccc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYGHLAF 54 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~~ 54 (246)
+.++++++++.|+++|+.||.|-++.+...
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMAA 92 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeeccccC
Confidence 578999999999999999999999886543
No 246
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=51.00 E-value=42 Score=22.65 Aligned_cols=39 Identities=10% Similarity=0.329 Sum_probs=28.3
Q ss_pred HHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHH
Q 042445 194 ALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGR 234 (246)
Q Consensus 194 ~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~ 234 (246)
...+..+.| +.||.++...+|+-+.+. .+++++.+.++.
T Consensus 71 ~~~Lr~~~~--i~PayhmnK~hWisv~Ld~~v~d~~i~~lI~~ 111 (125)
T 2kfp_A 71 VGSLRKKPG--IYPAYHMNKEHWITVLLNGPLGAKEIHSLIED 111 (125)
T ss_dssp HHHHHHSTT--EEECSSSCSSSEEEEETTTTCCHHHHHHHHHH
T ss_pred HHHHHhCCC--CCccccCCCCCeEEEEcCCCCCHHHHHHHHHH
Confidence 344445567 679999988999998886 377777766654
No 247
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=50.20 E-value=16 Score=30.26 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=27.9
Q ss_pred cCCChhhHHHHHHHHHHcCCEEEEccccCCccc
Q 042445 22 SGFSGSFVSPIAETAKKLGIMVIANEVYGHLAF 54 (246)
Q Consensus 22 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~ 54 (246)
..=+.++++++++.|+++|+.||.|-++.+...
T Consensus 64 ~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 96 (405)
T 1ht6_A 64 KYGNAAELKSLIGALHGKGVQAIADIVINHRCA 96 (405)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCC
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcCcccC
Confidence 344578999999999999999999999886553
No 248
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=49.95 E-value=11 Score=23.67 Aligned_cols=24 Identities=21% Similarity=0.106 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHcCCEEEEccccC
Q 042445 27 SFVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
.--.+|.++++++|+.++.|..-.
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHH
Confidence 346899999999999999998544
No 249
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=49.21 E-value=11 Score=33.95 Aligned_cols=29 Identities=21% Similarity=0.320 Sum_probs=26.0
Q ss_pred hhhHHHHHHHHHHcCCEEEEccccCCccc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVYGHLAF 54 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~ 54 (246)
.++++++++.|+++|+-||.|-+|.+...
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~NHt~~ 343 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFNHVYK 343 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 58999999999999999999999987553
No 250
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=48.79 E-value=14 Score=32.23 Aligned_cols=28 Identities=21% Similarity=0.122 Sum_probs=24.9
Q ss_pred CCCccCCChhhHHHHHHHHHHcCCEEEE
Q 042445 18 FHVGSGFSGSFVSPIAETAKKLGIMVIA 45 (246)
Q Consensus 18 NPtG~~~~~~~~~~l~~~~~~~~~~ii~ 45 (246)
.|.|-.||.+++++|++.|+++++.||=
T Consensus 215 ~~~~g~YT~~di~eIv~YA~~rgI~VIP 242 (543)
T 3rcn_A 215 RPHGGFYTQDDLREIVAFAADRHITVIP 242 (543)
T ss_dssp CCEECCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CccCCCcCHHHHHHHHHHHHHcCCEEee
Confidence 4557889999999999999999999884
No 251
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=48.51 E-value=18 Score=31.15 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=27.8
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
-+.++++++++.|+++|+.||.|-++.+...+
T Consensus 90 Gt~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~ 121 (527)
T 1gcy_A 90 GSDAQLRQAASALGGAGVKVLYDVVPNHMNRG 121 (527)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEeecCcCCC
Confidence 35789999999999999999999998866543
No 252
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=47.99 E-value=17 Score=30.88 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=25.9
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
+.++++++++.|+++|+.||.|-++.+..
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 57899999999999999999999887554
No 253
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=47.99 E-value=18 Score=30.35 Aligned_cols=30 Identities=37% Similarity=0.329 Sum_probs=26.5
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
-+.++++++++.|+++|+.||.|-++.+..
T Consensus 84 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 84 GSKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 357899999999999999999999887654
No 254
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=47.75 E-value=18 Score=30.64 Aligned_cols=30 Identities=23% Similarity=0.330 Sum_probs=26.5
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
-+.++++++++.|+++|+.||.|-++.+..
T Consensus 94 Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 94 GGNEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp TCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 357899999999999999999999887654
No 255
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=47.51 E-value=18 Score=30.22 Aligned_cols=29 Identities=24% Similarity=0.129 Sum_probs=26.6
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
+.++++++++.|+++|+.||.|-++.+..
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 57899999999999999999999998766
No 256
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=47.08 E-value=15 Score=30.08 Aligned_cols=25 Identities=28% Similarity=0.170 Sum_probs=22.5
Q ss_pred ccCCChhhHHHHHHHHHHcCCEEEE
Q 042445 21 GSGFSGSFVSPIAETAKKLGIMVIA 45 (246)
Q Consensus 21 G~~~~~~~~~~l~~~~~~~~~~ii~ 45 (246)
|-.+|.+++++|++.|+++++.||-
T Consensus 89 ~g~YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 89 KPFLSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp CEEBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 4579999999999999999999884
No 257
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=47.01 E-value=17 Score=31.26 Aligned_cols=30 Identities=17% Similarity=0.144 Sum_probs=26.5
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
=+.++++++++.|+++|+.||.|-++.+..
T Consensus 77 Gt~~dfk~Lv~~aH~~Gi~VilD~V~NHts 106 (549)
T 4aie_A 77 GTMADMDELISKAKEHHIKIVMDLVVNHTS 106 (549)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECccCCc
Confidence 467899999999999999999999987643
No 258
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=46.68 E-value=17 Score=30.73 Aligned_cols=31 Identities=10% Similarity=0.299 Sum_probs=27.0
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCccc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLAF 54 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~ 54 (246)
-+.++++++++.|+++|+.||.|-++.+...
T Consensus 95 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (478)
T 2guy_A 95 GTADDLKALSSALHERGMYLMVDVVANHMGY 125 (478)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCCE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcccCCC
Confidence 3578999999999999999999999886553
No 259
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=45.63 E-value=19 Score=31.46 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=27.8
Q ss_pred cCCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 22 SGFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 22 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
..-+.++++++++.|+++|+.||.|-++.+..
T Consensus 215 ~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 215 QFGDLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp TTCCHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 44568999999999999999999999887655
No 260
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=45.57 E-value=20 Score=30.47 Aligned_cols=32 Identities=9% Similarity=0.249 Sum_probs=27.8
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCccc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLAF 54 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~ 54 (246)
.-+.++++++++.|+++|+.||.|-++.+...
T Consensus 94 ~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 94 FGTADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp TCCHHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 34678999999999999999999999886654
No 261
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=45.38 E-value=17 Score=30.80 Aligned_cols=31 Identities=13% Similarity=0.226 Sum_probs=26.8
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
+.++++++++.|+++|+.||.|-++.+....
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 103 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVINHMTGM 103 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECCSBCCSS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccccCC
Confidence 4689999999999999999999998865543
No 262
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=45.19 E-value=21 Score=25.32 Aligned_cols=43 Identities=16% Similarity=0.022 Sum_probs=32.3
Q ss_pred hhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEcc
Q 042445 4 INQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIANE 47 (246)
Q Consensus 4 ~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De 47 (246)
+.+.|+.. ++|.| .|.|......+...|.+.|-.||+.++..-
T Consensus 74 I~d~I~~geIdlVInt~-~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l 120 (152)
T 1b93_A 74 VGALISEGKIDVLIFFW-DPLNAVPHDPDVKALLRLATVWNIPVATNV 120 (152)
T ss_dssp HHHHHHTTCCCEEEEEC-CTTSCCTTHHHHHHHHHHHHHTTCCEESSH
T ss_pred HHHHHHCCCccEEEEcC-CcccCCcccccHHHHHHHHHHcCCCEEeCH
Confidence 44455544 88888 887854448899999999999999888543
No 263
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=44.89 E-value=16 Score=30.93 Aligned_cols=31 Identities=16% Similarity=0.015 Sum_probs=27.2
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.-+.++++++++.|+++|+.||.|-++.+..
T Consensus 77 ~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 77 YGTKAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 3457999999999999999999999988664
No 264
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=44.72 E-value=23 Score=31.02 Aligned_cols=32 Identities=16% Similarity=0.243 Sum_probs=27.8
Q ss_pred cCCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 22 SGFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 22 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
..-+.++++++++.|+++|+.||.|-++.+..
T Consensus 218 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 218 HFGDKETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 34457999999999999999999999988665
No 265
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=44.39 E-value=27 Score=30.50 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=28.0
Q ss_pred cCCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 22 SGFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 22 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
..-+.++++++++.|+++|+.||.|-++.+..
T Consensus 214 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~ 245 (583)
T 1ea9_C 214 QFGDKDTLKKLVDLCHERGIRVLLDAVFNHSG 245 (583)
T ss_dssp TTCCHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEccccCC
Confidence 44468999999999999999999999988665
No 266
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=44.38 E-value=17 Score=31.30 Aligned_cols=31 Identities=19% Similarity=0.162 Sum_probs=27.3
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.=+.++++++++.|+++|+.||.|-++.+..
T Consensus 78 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 78 YGTKAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 3457899999999999999999999988664
No 267
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=44.21 E-value=17 Score=30.85 Aligned_cols=31 Identities=16% Similarity=0.038 Sum_probs=27.3
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.-+.++++++++.|+++|+.||.|-++.+..
T Consensus 75 ~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 75 YGTKSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 4457899999999999999999999988654
No 268
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=44.01 E-value=20 Score=29.85 Aligned_cols=31 Identities=26% Similarity=0.426 Sum_probs=27.2
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
+.++++++++.|+++|+.||.|-++.+...+
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 103 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTFD 103 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCSC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccCC
Confidence 5789999999999999999999998866543
No 269
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=44.00 E-value=27 Score=30.82 Aligned_cols=37 Identities=19% Similarity=0.091 Sum_probs=30.4
Q ss_pred CCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 19 HVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 19 PtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
|.+..-+.++++++++.|+++|+-||.|-++.+...+
T Consensus 197 ~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~ 233 (617)
T 1m7x_A 197 PTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTD 233 (617)
T ss_dssp ECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCS
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEecCcccCc
Confidence 3344556899999999999999999999999877543
No 270
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=43.48 E-value=18 Score=30.76 Aligned_cols=31 Identities=23% Similarity=0.161 Sum_probs=27.2
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.-+.++++++++.|+++|+.||.|-++.+..
T Consensus 79 ~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 109 (485)
T 1wpc_A 79 YGTRSQLQAAVTSLKNNGIQVYGDVVMNHKG 109 (485)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEeccccC
Confidence 4457899999999999999999999988654
No 271
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=43.39 E-value=17 Score=30.83 Aligned_cols=29 Identities=17% Similarity=0.337 Sum_probs=25.6
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
+.++++++++.|+++|+.||.|-++.+..
T Consensus 101 t~~df~~Lv~~aH~~Gi~VilD~V~NH~s 129 (488)
T 2wc7_A 101 GNEAFKELLDAAHQRNIKVVLDGVFNHSS 129 (488)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCcCC
Confidence 46899999999999999999999887644
No 272
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=43.21 E-value=16 Score=23.50 Aligned_cols=24 Identities=13% Similarity=0.217 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHcCCEEEEccccC
Q 042445 27 SFVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
.--.+|.++++++|+.++.|..-.
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRDVKLA 50 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEECHHHH
Confidence 346899999999999999998544
No 273
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=42.43 E-value=22 Score=30.90 Aligned_cols=31 Identities=16% Similarity=0.103 Sum_probs=27.1
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.-+.++++++++.|+++|+.||.|-++.+..
T Consensus 76 ~Gt~~df~~Lv~~aH~~Gi~VilD~V~NHts 106 (557)
T 1zja_A 76 YGTMEDFDRLMAELKKRGMRLMVDVVINHSS 106 (557)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 3457899999999999999999999988655
No 274
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=42.21 E-value=22 Score=30.60 Aligned_cols=27 Identities=30% Similarity=0.305 Sum_probs=23.9
Q ss_pred CCccCCChhhHHHHHHHHHHcCCEEEE
Q 042445 19 HVGSGFSGSFVSPIAETAKKLGIMVIA 45 (246)
Q Consensus 19 PtG~~~~~~~~~~l~~~~~~~~~~ii~ 45 (246)
|.|..++.+++++|++.|+++++-||-
T Consensus 207 ~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 207 PVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 446679999999999999999999985
No 275
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=41.14 E-value=16 Score=23.75 Aligned_cols=23 Identities=22% Similarity=0.275 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHcCCEEEEccccC
Q 042445 28 FVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 28 ~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
--++|.++++++|+.++.|..-.
T Consensus 43 ~A~~I~~~A~e~gVPi~e~~~LA 65 (97)
T 3t7y_A 43 RAKRIIAEAEKYGVPIMRNVPLA 65 (97)
T ss_dssp HHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHcCCeEEECHHHH
Confidence 45889999999999999998644
No 276
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=41.00 E-value=24 Score=30.80 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=26.6
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
-+.++++++++.|+++|+.||.|-++.+..
T Consensus 90 Gt~~df~~lv~~aH~~Gi~VilD~V~NH~s 119 (570)
T 1m53_A 90 GTMEDFDSLVAEMKKRNMRLMIDVVINHTS 119 (570)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 367899999999999999999999987654
No 277
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=40.44 E-value=9.1 Score=25.68 Aligned_cols=52 Identities=10% Similarity=-0.038 Sum_probs=38.1
Q ss_pred hHHHHHHHHHhcCeEEecC---CCcCCCCeEEEEeecChHHHHHHHHHHHHHHHH
Q 042445 190 DMEFALKLAKEESVIVLPG---ITVGLKDWLRITFAVEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 190 ~~~~~~~ll~~~gi~v~pg---~~f~~~~~iRls~~~~~~~l~~~~~~l~~~~~~ 241 (246)
..+.+.+.|.+.|+...-- .+|+..+..++-+..+++++++.++.|.+..+.
T Consensus 17 kld~V~~AL~~~G~~~t~v~~~gGf~r~g~~~leivV~De~Vd~vi~~I~~~a~T 71 (114)
T 3m05_A 17 DANYLSDQFIDQNVRATKLSTTGGFLQSGNTTFMIGIEEERVPEVLEIIKKASHT 71 (114)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCCEEEEEEeccccccCCEEEEEEEcHHHHHHHHHHHHHHcCC
Confidence 5566777888888765322 234445678888888999999999999887643
No 278
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=40.06 E-value=17 Score=23.68 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=20.0
Q ss_pred hhHHHHHHHHHHcCCEEEEccccC
Q 042445 27 SFVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
.--.+|.++++++|+.++.|..-.
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (98)
T 3c01_E 27 QRALAVRAYAEKVGVPVIVDIKLA 50 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCeecCHHHH
Confidence 346889999999999999997544
No 279
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=39.84 E-value=22 Score=29.82 Aligned_cols=29 Identities=24% Similarity=0.433 Sum_probs=25.6
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
+.++++++++.|+++|+.||.|-++....
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 56899999999999999999999876544
No 280
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=39.76 E-value=25 Score=30.49 Aligned_cols=30 Identities=7% Similarity=-0.001 Sum_probs=26.2
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
-+.++++++++.|+++|+.||.|-++.+..
T Consensus 76 Gt~~df~~lv~~~h~~Gi~VilD~V~NH~s 105 (558)
T 1uok_A 76 GTMEDWDELLHEMHERNMKLMMDLVVNHTS 105 (558)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 357899999999999999999999887644
No 281
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=39.71 E-value=13 Score=25.79 Aligned_cols=42 Identities=10% Similarity=0.084 Sum_probs=29.6
Q ss_pred hhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEc
Q 042445 4 INQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIAN 46 (246)
Q Consensus 4 ~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~D 46 (246)
|.+.|+.. ++|.| .|.|......+...|.+.|-.||+.++..
T Consensus 66 I~d~I~~geIdlVInt~-~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 66 MGARVAEGRILAVIFFR-DPLTAQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp HHHHHHTTCEEEEEEEC-CTTTCCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred HHHHHHCCCccEEEEcc-CcccCCCccchHHHHHHHHHHcCCCeEcC
Confidence 34445543 88888 77774433677889999999999888754
No 282
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=39.70 E-value=32 Score=30.27 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=28.9
Q ss_pred cCCChhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 22 SGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 22 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
..-+.++++++++.|+++|+-||.|-+|.+...+
T Consensus 188 ~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~ 221 (602)
T 2bhu_A 188 PYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPS 221 (602)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSS
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEecccccccC
Confidence 3446789999999999999999999999876543
No 283
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=39.05 E-value=49 Score=18.19 Aligned_cols=28 Identities=11% Similarity=0.154 Sum_probs=20.7
Q ss_pred CeEEEEeec-ChHHHHHHHHHHHHHHHHH
Q 042445 215 DWLRITFAV-EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 215 ~~iRls~~~-~~~~l~~~~~~l~~~~~~~ 242 (246)
..+|+|+.. +..+-++....+.+.+.++
T Consensus 2 ervrisitartkkeaekfaailikvfael 30 (62)
T 2gjh_A 2 ERVRISITARTKKEAEKFAAILIKVFAEL 30 (62)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 368999986 7777777777777777654
No 284
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=38.90 E-value=36 Score=30.08 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=29.2
Q ss_pred cCCChhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 22 SGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 22 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
..-+.++++++++.|+++|+-||.|-++.....+
T Consensus 198 ~~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~ 231 (618)
T 3m07_A 198 AYGTPDDFKAFIDAAHGYGLSVVLDIVLNHFGPE 231 (618)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSS
T ss_pred CcCCHHHHHHHHHHHHHCCCEEEEeecCccCCCC
Confidence 3456789999999999999999999999976544
No 285
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=38.57 E-value=27 Score=30.99 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=27.3
Q ss_pred cCCChhhHHHHHHHHHHcCCEEEEccccCCc
Q 042445 22 SGFSGSFVSPIAETAKKLGIMVIANEVYGHL 52 (246)
Q Consensus 22 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~ 52 (246)
..=+.++++++++.|+++|+.||.|-++.+.
T Consensus 281 ~~Gt~~df~~LV~~aH~~GI~VIlD~V~NHt 311 (645)
T 4aef_A 281 RLGGDRAFVDLLSELKRFDIKVILDGVFHHT 311 (645)
T ss_dssp GGTCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred ccCCHHHHHHHHHHhhhcCCEEEEEeccccc
Confidence 4457899999999999999999999998764
No 286
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=38.39 E-value=29 Score=30.45 Aligned_cols=31 Identities=23% Similarity=0.235 Sum_probs=26.8
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.-+.++++++++.|+++|+.||.|-++.+..
T Consensus 195 ~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 225 (601)
T 3edf_A 195 YGSNEDFVRLSTEARKRGMGLIQDVVLSHIG 225 (601)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEECCcccC
Confidence 3467899999999999999999999987554
No 287
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=38.05 E-value=28 Score=30.52 Aligned_cols=30 Identities=23% Similarity=0.274 Sum_probs=26.6
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
-+.++++++++.|+++|+.||.|-++.+..
T Consensus 85 Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~ 114 (589)
T 3aj7_A 85 GTNEDCFALIEKTHKLGMKFITDLVINHCS 114 (589)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 357899999999999999999999988654
No 288
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=37.59 E-value=33 Score=30.98 Aligned_cols=37 Identities=16% Similarity=0.084 Sum_probs=30.4
Q ss_pred CCccCCChhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 19 HVGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 19 PtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
|+...-+.++++++++.|+++|+-||.|-++..+..+
T Consensus 305 ~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~NH~~~~ 341 (722)
T 3k1d_A 305 PTSRFGTPDDFRALVDALHQAGIGVIVDWVPAHFPKD 341 (722)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEECTTCCCCC
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEEEeeccCCc
Confidence 3444557899999999999999999999998876543
No 289
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=36.42 E-value=24 Score=25.73 Aligned_cols=42 Identities=17% Similarity=0.026 Sum_probs=30.3
Q ss_pred hhhhhccc----cccCCcCCCccCCChhhHHHHHHHHHHcCCEEEEc
Q 042445 4 INQDITRE----FSDFQVFHVGSGFSGSFVSPIAETAKKLGIMVIAN 46 (246)
Q Consensus 4 ~~~~~~~~----~~~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~D 46 (246)
|.+.|+.. ++|.| .|.|......+...|.+.|-.||++++.-
T Consensus 90 I~d~I~~geIdlVInt~-dPl~~~~h~~D~~~IRR~A~~~~IP~~Tn 135 (178)
T 1vmd_A 90 IGAMIAEGKIDVLIFFW-DPLEPQAHDVDVKALIRIATVYNIPVAIT 135 (178)
T ss_dssp HHHHHHTTSCCEEEEEC-CSSSCCTTSCCHHHHHHHHHHTTCCEESS
T ss_pred HHHHHHCCCccEEEEcc-CccCCCcccccHHHHHHHHHHcCCCEEeC
Confidence 34445543 88888 77774443678899999999999888754
No 290
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=36.36 E-value=28 Score=30.15 Aligned_cols=29 Identities=24% Similarity=0.257 Sum_probs=25.9
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
+.++++++++.|+++|+.||.|-++.+..
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~NH~s 105 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGIKIIMDLVVNHTS 105 (543)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCccc
Confidence 57899999999999999999999987654
No 291
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=36.11 E-value=29 Score=30.10 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=25.8
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
+.++++++++.|+++|+.||.|-++.+..
T Consensus 77 t~~d~~~lv~~~h~~Gi~vilD~V~NH~~ 105 (555)
T 2ze0_A 77 TMDDFDELLAQAHRRGLKVILDLVINHTS 105 (555)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 57899999999999999999999887644
No 292
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=35.97 E-value=32 Score=29.61 Aligned_cols=25 Identities=16% Similarity=0.174 Sum_probs=23.1
Q ss_pred ccCCChhhHHHHHHHHHHcCCEEEE
Q 042445 21 GSGFSGSFVSPIAETAKKLGIMVIA 45 (246)
Q Consensus 21 G~~~~~~~~~~l~~~~~~~~~~ii~ 45 (246)
|-.++.+++++|++.|+++++.||-
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6789999999999999999999984
No 293
>1wwh_A Nucleoporin 35, nucleoporin; structural genomics, MPPN, riken structural genomics/proteomics initiative, RSGI, protein transport; 2.70A {Mus musculus} SCOP: d.58.7.1
Probab=35.88 E-value=49 Score=22.30 Aligned_cols=47 Identities=11% Similarity=0.007 Sum_probs=32.7
Q ss_pred HHHHHHHhhcCCCCccccCCCCceEEEEEeccccccCCCChHHHHHHHHHhcCeEE
Q 042445 150 ADKCCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV 205 (246)
Q Consensus 150 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 205 (246)
...+++.+++++.+.....+.+++.+-+++. +...+.+.|.+.|..+
T Consensus 37 ~~~VL~~F~~~G~Iv~~~~~~~~NWihI~Y~---------s~~~A~rAL~kNG~ii 83 (119)
T 1wwh_A 37 ASYILLQFAQYGNILKHVMSNTGNWMHIRYQ---------SKLQARKALSKDGRIF 83 (119)
T ss_dssp HHHHHHHHHTTSCEEEEEECSSSSEEEEEES---------SHHHHHHHHTTTTCEE
T ss_pred HHHHHHHHHhhCcEEEeccCCCCCeEEEEeC---------CHHHHHHHHHhCCeEe
Confidence 4455666777766655556778888888886 4556677788888765
No 294
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=35.40 E-value=24 Score=17.28 Aligned_cols=20 Identities=30% Similarity=0.200 Sum_probs=16.4
Q ss_pred CChhhHHHHHHHHHHcCCEE
Q 042445 24 FSGSFVSPIAETAKKLGIMV 43 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~i 43 (246)
-++++++++.+-+++.|+.+
T Consensus 12 gtpeelkklkeeakkanirv 31 (36)
T 2ki0_A 12 GTPEELKKLKEEAKKANIRV 31 (36)
T ss_dssp CCHHHHHHHHHHHHHHCCCC
T ss_pred CCHHHHHHHHHHHHhccEEE
Confidence 35789999999999988654
No 295
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=34.65 E-value=35 Score=31.01 Aligned_cols=36 Identities=17% Similarity=0.186 Sum_probs=29.9
Q ss_pred CccCCChhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 20 VGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 20 tG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
....-+.++++++++.|+++|+-||.|-+|.+...+
T Consensus 244 ~~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~ 279 (755)
T 3aml_A 244 SSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNN 279 (755)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCBCCC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 334456899999999999999999999999876543
No 296
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=34.62 E-value=28 Score=30.26 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=27.6
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
-+.++++++++.|+++|+-||.|-++.+...+
T Consensus 165 Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 196 (558)
T 3vgf_A 165 GGPEGFRKLVDEAHKKGLGVILDVVYNHVGPE 196 (558)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEECCSCCCSS
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEeeccccCC
Confidence 34689999999999999999999999876543
No 297
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=34.62 E-value=30 Score=30.98 Aligned_cols=31 Identities=6% Similarity=-0.056 Sum_probs=26.8
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.=+.+++++|++.|+++|+.||.|-++.+..
T Consensus 308 ~Gt~~df~~Lv~~aH~~GikVilD~V~NHts 338 (696)
T 4aee_A 308 LGTMEDFEKLVQVLHSRKIKIVLDITMHHTN 338 (696)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECSSEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEeccccccC
Confidence 3467899999999999999999999987554
No 298
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=34.44 E-value=29 Score=30.48 Aligned_cols=31 Identities=13% Similarity=0.001 Sum_probs=26.9
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.-+.++++++++.|+++|+.||.|-++.+..
T Consensus 205 ~Gt~~dfk~Lv~~aH~~GI~VilD~V~NH~~ 235 (599)
T 3bc9_A 205 YGTKGELENAIDALHNNDIKVYFDAVLNHRM 235 (599)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEECcCCCC
Confidence 3457899999999999999999999988654
No 299
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=34.30 E-value=33 Score=29.67 Aligned_cols=26 Identities=23% Similarity=0.169 Sum_probs=23.2
Q ss_pred CccCCChhhHHHHHHHHHHcCCEEEE
Q 042445 20 VGSGFSGSFVSPIAETAKKLGIMVIA 45 (246)
Q Consensus 20 tG~~~~~~~~~~l~~~~~~~~~~ii~ 45 (246)
.|-.|+.+++++|++.|+++++.||-
T Consensus 249 ~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 249 PGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp CCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 35679999999999999999998884
No 300
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=34.29 E-value=29 Score=31.07 Aligned_cols=31 Identities=23% Similarity=0.131 Sum_probs=26.6
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.=+.+++++|++.|+++|+.||.|-++.+..
T Consensus 104 ~Gt~~df~~Lv~~aH~~GikVilD~V~NHts 134 (686)
T 1qho_A 104 FGNWTTFDTLVNDAHQNGIKVIVDFVPNHST 134 (686)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 3457899999999999999999999887543
No 301
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=33.90 E-value=29 Score=31.01 Aligned_cols=31 Identities=16% Similarity=-0.019 Sum_probs=26.8
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.=+.+++++|++.|+++|+.||.|-++.+..
T Consensus 112 ~Gt~~dfk~Lv~~aH~~GI~VilD~V~NHts 142 (686)
T 1d3c_A 112 YGTIADFQNLIAAAHAKNIKVIIDFAPNHTS 142 (686)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeCcCccc
Confidence 3468899999999999999999999887554
No 302
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=33.77 E-value=29 Score=30.96 Aligned_cols=31 Identities=23% Similarity=0.005 Sum_probs=26.7
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.=+.+++++|++.|+++|+.||.|-++.+..
T Consensus 113 ~Gt~~dfk~Lv~~aH~~GikVilD~V~NHts 143 (683)
T 3bmv_A 113 FGSFTDFQNLINTAHAHNIKVIIDFAPNHTS 143 (683)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEcccccc
Confidence 3457899999999999999999999887544
No 303
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=33.67 E-value=51 Score=29.70 Aligned_cols=30 Identities=30% Similarity=0.343 Sum_probs=26.6
Q ss_pred hhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
.++++++++.|+++|+-||.|-+|.+...+
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV~NH~~~~ 295 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVVYNHTAEG 295 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSCCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccCc
Confidence 589999999999999999999999876543
No 304
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=33.44 E-value=30 Score=30.89 Aligned_cols=31 Identities=23% Similarity=0.086 Sum_probs=26.5
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.-+.+++++|++.|+++|+.||.|-++.+..
T Consensus 108 ~Gt~~df~~Lv~~aH~~GIkVilD~V~NHts 138 (680)
T 1cyg_A 108 FGTLSDFQRLVDAAHAKGIKVIIDFAPNHTS 138 (680)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeCCCCCC
Confidence 3457899999999999999999999887543
No 305
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=33.26 E-value=27 Score=27.95 Aligned_cols=23 Identities=39% Similarity=0.388 Sum_probs=19.9
Q ss_pred hhhHHHHHHHHHHcCCEEEEccc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEV 48 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~ 48 (246)
.+.++++++.|.++|+.+|+|--
T Consensus 104 ~~~ld~~v~~a~~~Gi~VilD~H 126 (327)
T 3pzt_A 104 KNKVKEAVEAAKELGIYVIIDWH 126 (327)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 36789999999999999999853
No 306
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=32.76 E-value=59 Score=29.45 Aligned_cols=29 Identities=24% Similarity=0.298 Sum_probs=26.3
Q ss_pred hhhHHHHHHHHHHcCCEEEEccccCCccc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVYGHLAF 54 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~ 54 (246)
.++++++++.|+++|+-||.|-+|.+...
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~NH~~~ 300 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVYNHTAE 300 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 78999999999999999999999987653
No 307
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=32.20 E-value=36 Score=26.63 Aligned_cols=24 Identities=13% Similarity=0.087 Sum_probs=21.1
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEV 48 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~ 48 (246)
+.+.++++++.|.++|+.+|+|-.
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild~h 86 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLEVH 86 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEG
T ss_pred CHHHHHHHHHHHHHCCCEEEEEec
Confidence 457899999999999999999953
No 308
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=32.03 E-value=34 Score=30.44 Aligned_cols=31 Identities=26% Similarity=0.112 Sum_probs=27.3
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
+.++++++++.|+++|+-||.|-+|.+...+
T Consensus 240 ~~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~ 270 (657)
T 2wsk_A 240 ALDEFRDAIKALHKAGIEVILDIVLNHSAEL 270 (657)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSCCTTC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecccccc
Confidence 3689999999999999999999999876644
No 309
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=31.90 E-value=32 Score=26.79 Aligned_cols=24 Identities=8% Similarity=0.095 Sum_probs=20.8
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEV 48 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~ 48 (246)
..+.++++++.|.++|+.+|+|-.
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~H 85 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEVH 85 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 456889999999999999999853
No 310
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=31.77 E-value=16 Score=27.01 Aligned_cols=27 Identities=15% Similarity=0.187 Sum_probs=18.5
Q ss_pred hhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 27 SFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
+++..+...+...+.+||+||++..+.
T Consensus 75 ~~~~~~~~~~~~~~~vliIDEAq~l~~ 101 (199)
T 2r2a_A 75 HDMYEWIKKPENIGSIVIVDEAQDVWP 101 (199)
T ss_dssp GGHHHHTTSGGGTTCEEEETTGGGTSB
T ss_pred HHHHHHhhccccCceEEEEEChhhhcc
Confidence 455544332456699999999998653
No 311
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=31.38 E-value=31 Score=27.18 Aligned_cols=24 Identities=29% Similarity=0.180 Sum_probs=20.4
Q ss_pred hhhHHHHHHHHHHcCCEEEEcccc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVY 49 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y 49 (246)
.+.++++++.|.++|+.+|+|-..
T Consensus 79 ~~~ld~~v~~a~~~Gi~Vild~H~ 102 (303)
T 7a3h_A 79 KEKVKEAVEAAIDLDIYVIIDWHI 102 (303)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 367889999999999999998643
No 312
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=31.14 E-value=49 Score=29.25 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=28.9
Q ss_pred cCCChhhHHHHHHHHHHcC--C--EEEEccccCCcccC
Q 042445 22 SGFSGSFVSPIAETAKKLG--I--MVIANEVYGHLAFG 55 (246)
Q Consensus 22 ~~~~~~~~~~l~~~~~~~~--~--~ii~De~y~~~~~~ 55 (246)
..-+.++++++++.|+++| + .||.|-++.+...+
T Consensus 234 ~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH~~~~ 271 (637)
T 1ji1_A 234 AFGDNSTLQTLINDIHSTANGPKGYLILDGVFNHTGDS 271 (637)
T ss_dssp TTCCHHHHHHHHHHHHCSSSSSCCEEEEEECCSBCCTT
T ss_pred ccCCHHHHHHHHHHHHhCCCCccceEEEEECcccCCCC
Confidence 3446799999999999999 9 99999999876543
No 313
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=30.99 E-value=34 Score=26.61 Aligned_cols=21 Identities=29% Similarity=0.317 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHHcCCEEEEcc
Q 042445 27 SFVSPIAETAKKLGIMVIANE 47 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De 47 (246)
+.+++++++|.++|+.||.|-
T Consensus 90 ~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 90 DDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEe
Confidence 457899999999999999885
No 314
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=30.90 E-value=38 Score=29.11 Aligned_cols=25 Identities=24% Similarity=0.259 Sum_probs=22.8
Q ss_pred ccCCChhhHHHHHHHHHHcCCEEEE
Q 042445 21 GSGFSGSFVSPIAETAKKLGIMVIA 45 (246)
Q Consensus 21 G~~~~~~~~~~l~~~~~~~~~~ii~ 45 (246)
|-.|+.+++++|++.|+++++-||-
T Consensus 214 ~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 214 SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 5679999999999999999999884
No 315
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=30.55 E-value=36 Score=26.49 Aligned_cols=22 Identities=18% Similarity=0.131 Sum_probs=19.2
Q ss_pred hhHHHHHHHHHHcCCEEEEccc
Q 042445 27 SFVSPIAETAKKLGIMVIANEV 48 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~ 48 (246)
+.++++++.|.++|+.+|+|-.
T Consensus 79 ~~ld~~v~~a~~~Gi~vild~h 100 (293)
T 1tvn_A 79 SRLDTVVNAAIAEDMYVIIDFH 100 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcC
Confidence 5678899999999999999854
No 316
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=30.40 E-value=48 Score=30.86 Aligned_cols=30 Identities=17% Similarity=0.060 Sum_probs=26.8
Q ss_pred hhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
.++++++++.|+++|+-||.|-+|.+...+
T Consensus 531 ~~dfk~LV~~aH~~GI~VILDvV~NHt~~~ 560 (921)
T 2wan_A 531 ITELKQLIQSLHQQRIGVNMDVVYNHTFDV 560 (921)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEcccccccc
Confidence 589999999999999999999999876644
No 317
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=30.10 E-value=35 Score=30.27 Aligned_cols=30 Identities=23% Similarity=0.234 Sum_probs=26.2
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
=+.++++++++.|+++|+.||.|-++.+..
T Consensus 153 Gt~~df~~Lv~~aH~~GI~VilD~V~NH~s 182 (644)
T 3czg_A 153 GSNDDLVALTSRLREAGISLCADFVLNHTA 182 (644)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 357899999999999999999999887544
No 318
>2fki_A Protein YJBR; NESG, GFT-alpha-beta, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Escherichia coli} SCOP: d.198.3.1
Probab=29.97 E-value=1.3e+02 Score=20.21 Aligned_cols=49 Identities=16% Similarity=0.129 Sum_probs=34.0
Q ss_pred hHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHHHHHHH
Q 042445 190 DMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGRMKAFY 239 (246)
Q Consensus 190 ~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~l~~~~ 239 (246)
+.+....+..+++= +.||.++...+|+-+.+. .+++++.+.++.=-+.+
T Consensus 53 ~pe~~~~L~~~~~~-i~PayhmnK~hWisv~ld~~v~~~~l~~lI~~Sy~lv 103 (126)
T 2fki_A 53 SPELAELLRQQHSD-VRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQA 103 (126)
T ss_dssp CHHHHHHHHHSCST-TCCCCSSCTTTEEEEECTTTSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhCCC-eecCCcCCCceeEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 44555666666652 469999888999999886 37887777775544333
No 319
>2a1v_A Conserved hypothetical protein; structural genomics, PSI, protein structure initiative; 2.15A {Deinococcus radiodurans} SCOP: d.198.3.1
Probab=29.70 E-value=1.4e+02 Score=20.62 Aligned_cols=49 Identities=22% Similarity=0.322 Sum_probs=33.9
Q ss_pred hHHHHHHHHHhcCeEEecCCCcCCCCeEEEEee--cChHHHHHHHHHHHHH
Q 042445 190 DMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALENGLGRMKAF 238 (246)
Q Consensus 190 ~~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~--~~~~~l~~~~~~l~~~ 238 (246)
+.+....+..+++=.+.||.++...+|+-+.+. .+++++.+.++.=-+.
T Consensus 64 ~pe~~~~L~~~~~~~i~PayhmnK~hWvsV~Ld~~v~~~el~elI~~Sy~L 114 (144)
T 2a1v_A 64 DPERGEELRQAHPQSIAPGYHLNKKHWVTVTLDGTVPAELLGELLRGSYLL 114 (144)
T ss_dssp CHHHHHHHHHHSTTTEEECTTSCTTTEEEEECSSSSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCeEecCCccCCCeEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 345556677777611479999988999998887 3788777777554433
No 320
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=29.48 E-value=40 Score=29.84 Aligned_cols=30 Identities=10% Similarity=0.183 Sum_probs=26.0
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
-+.++++++++.|+++|+.||.|-++.+..
T Consensus 160 Gt~~d~~~Lv~~ah~~GI~VilD~V~NH~s 189 (628)
T 1g5a_A 160 GTIGDLREVIAALHEAGISAVVDFIFNHTS 189 (628)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecCccc
Confidence 357899999999999999999999886544
No 321
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=34.52 E-value=12 Score=23.72 Aligned_cols=27 Identities=19% Similarity=0.277 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHcCCEEEEccccCCccc
Q 042445 28 FVSPIAETAKKLGIMVIANEVYGHLAF 54 (246)
Q Consensus 28 ~~~~l~~~~~~~~~~ii~De~y~~~~~ 54 (246)
--.+|.++++++|+.++.|..-....+
T Consensus 28 ~A~~I~e~A~e~~VPi~e~~~LAr~Ly 54 (87)
T 3b1s_B 28 IAQKIVEIAENYSIPVVRKPELARALY 54 (87)
Confidence 357899999999999999986664443
No 322
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=28.39 E-value=36 Score=27.58 Aligned_cols=25 Identities=12% Similarity=0.058 Sum_probs=21.2
Q ss_pred ChhhHHHHHHHHHHcCCEEEEcccc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVY 49 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y 49 (246)
..+.++++++.|.++|+.+|+|-..
T Consensus 85 ~l~~ld~~v~~a~~~GiyVIlDlH~ 109 (345)
T 3jug_A 85 DIDTVREVIELAEQNKMVAVVEVHD 109 (345)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3578899999999999999998643
No 323
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=28.20 E-value=40 Score=27.28 Aligned_cols=23 Identities=22% Similarity=0.055 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHcCCEEEEcccc
Q 042445 27 SFVSPIAETAKKLGIMVIANEVY 49 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~y 49 (246)
+.++++++.|.++|+.+|+|-..
T Consensus 90 ~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 90 DLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecc
Confidence 57889999999999999998654
No 324
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=28.19 E-value=46 Score=29.39 Aligned_cols=30 Identities=23% Similarity=0.173 Sum_probs=26.7
Q ss_pred hhhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
.++++++++.|+++|+-||.|-+|.+...+
T Consensus 181 ~~~~~~lv~~~H~~Gi~VilD~V~nH~~~~ 210 (637)
T 1gjw_A 181 DEEFKAFVEACHILGIRVILDFIPRTAARD 210 (637)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEETT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCCcCc
Confidence 589999999999999999999999876644
No 325
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=28.19 E-value=43 Score=21.70 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=18.1
Q ss_pred ccCCChhhHHHHHHHHHHcCC
Q 042445 21 GSGFSGSFVSPIAETAKKLGI 41 (246)
Q Consensus 21 G~~~~~~~~~~l~~~~~~~~~ 41 (246)
|+..+++-+++++++|..|++
T Consensus 39 Gi~~~d~VldKc~ELC~~y~l 59 (101)
T 2keb_A 39 GLDCEEALIEKLVELCVQYGQ 59 (101)
T ss_dssp TCBCCHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHcCC
Confidence 667788889999999999985
No 326
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=27.96 E-value=44 Score=30.87 Aligned_cols=27 Identities=30% Similarity=0.144 Sum_probs=24.2
Q ss_pred CCccCCChhhHHHHHHHHHHcCCEEEE
Q 042445 19 HVGSGFSGSFVSPIAETAKKLGIMVIA 45 (246)
Q Consensus 19 PtG~~~~~~~~~~l~~~~~~~~~~ii~ 45 (246)
|.|-.|+.+++++|++.|+++++-||-
T Consensus 392 ~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 392 VYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp CEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 456789999999999999999998884
No 327
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=27.76 E-value=43 Score=25.97 Aligned_cols=21 Identities=14% Similarity=0.093 Sum_probs=18.6
Q ss_pred hhHHHHHHHHHHcCCEEEEcc
Q 042445 27 SFVSPIAETAKKLGIMVIANE 47 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De 47 (246)
+.++++++.|.++|+.+|+|-
T Consensus 77 ~~ld~~v~~a~~~Gi~vild~ 97 (291)
T 1egz_A 77 AKVERVVDAAIANDMYAIIGW 97 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 467889999999999999985
No 328
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=27.58 E-value=34 Score=23.22 Aligned_cols=23 Identities=13% Similarity=0.226 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHcCCEEEEccccC
Q 042445 28 FVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 28 ~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
--.+|.++|+++|+.++.|..-.
T Consensus 72 ~A~~I~~~A~e~~VPi~e~~~LA 94 (123)
T 2jli_A 72 QVQTVRKIAEEEGVPILQRIPLA 94 (123)
T ss_dssp HHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 45889999999999999998544
No 329
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=27.32 E-value=56 Score=26.58 Aligned_cols=25 Identities=24% Similarity=0.098 Sum_probs=21.0
Q ss_pred hhhHHHHHHHHHHcCCEEEEccccC
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
.+.++++++.|.++|+.+|+|-.+.
T Consensus 102 l~~~~~vv~~a~~~Gi~vildlH~~ 126 (376)
T 3ayr_A 102 LKRVHEVVDYPYKNGAFVILNLHHE 126 (376)
T ss_dssp HHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCc
Confidence 3568999999999999999996553
No 330
>3pg6_A E3 ubiquitin-protein ligase DTX3L; DNA-damage, metal-binding, nucleus, phosphorylation, chromatin regulator, UBL conjugation pathway, zinc-finger; HET: CIT; 1.70A {Homo sapiens}
Probab=26.94 E-value=67 Score=22.74 Aligned_cols=28 Identities=11% Similarity=0.099 Sum_probs=24.2
Q ss_pred CCeEEEEeecChHHHHHHHHHHHHHHHH
Q 042445 214 KDWLRITFAVEPSALENGLGRMKAFYDR 241 (246)
Q Consensus 214 ~~~iRls~~~~~~~l~~~~~~l~~~~~~ 241 (246)
.+.-|.++..+.++=++.++.|++++++
T Consensus 75 ~G~~R~AYLPdn~eGr~VL~LL~~AF~~ 102 (159)
T 3pg6_A 75 PGIQRTAYLPDNKEGRKVLKLLYRAFDQ 102 (159)
T ss_dssp CCEEEEEEEEESHHHHHHHHHHHHHHHT
T ss_pred CCCCeEEECCCCHHHHHHHHHHHHHHHc
Confidence 5889999998777789999999999875
No 331
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=26.84 E-value=44 Score=27.00 Aligned_cols=23 Identities=17% Similarity=0.211 Sum_probs=19.5
Q ss_pred hhhHHHHHHHHHHcCCEEEEccc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEV 48 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~ 48 (246)
.+.++++++.|.++|+.+|+|-.
T Consensus 120 l~~ld~~v~~a~~~Gi~Vild~H 142 (359)
T 4hty_A 120 LELLDQVVAWNNELGIYTILDWH 142 (359)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcC
Confidence 35668999999999999999853
No 332
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=26.80 E-value=26 Score=23.67 Aligned_cols=27 Identities=11% Similarity=0.206 Sum_probs=22.8
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccC
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
++.+.++.|.+.++..+++++.|-=+.
T Consensus 36 i~~~~l~~I~~~~~~r~VIi~TD~D~~ 62 (119)
T 2fcj_A 36 ISDARLEELADELEGYDVYLLADADEA 62 (119)
T ss_dssp CCHHHHHHHHHHTTTSEEEEECCSSHH
T ss_pred cCHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 788999999999988899999886443
No 333
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=26.73 E-value=35 Score=23.63 Aligned_cols=23 Identities=22% Similarity=0.095 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHcCCEEEEccccC
Q 042445 28 FVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 28 ~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
--.+|.++|+++|+.++.|..-.
T Consensus 82 ~A~~I~e~A~e~gVPi~e~~~LA 104 (137)
T 3bzs_A 82 KALQIIKLAELYDIPVIEDIPLA 104 (137)
T ss_dssp HHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 45889999999999999998544
No 334
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=26.64 E-value=48 Score=29.76 Aligned_cols=26 Identities=15% Similarity=0.103 Sum_probs=24.0
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccC
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
+.++++++++.|+++|+.||.|-++.
T Consensus 319 t~edfk~LV~~aH~~GI~VilD~V~N 344 (695)
T 3zss_A 319 TLDDFDHFVTEAGKLGLEIALDFALQ 344 (695)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeecc
Confidence 46899999999999999999999886
No 335
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=26.56 E-value=45 Score=27.63 Aligned_cols=24 Identities=17% Similarity=0.051 Sum_probs=21.3
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEV 48 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~ 48 (246)
..+.++++++.|.++|+.+|+|-.
T Consensus 111 ~~~~ld~vV~~a~~~Gl~VILDlH 134 (399)
T 3n9k_A 111 QVQYLEKALGWARKNNIRVWIDLH 134 (399)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 357899999999999999999963
No 336
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=25.96 E-value=43 Score=26.30 Aligned_cols=22 Identities=18% Similarity=0.231 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHcCCEEEEccc
Q 042445 27 SFVSPIAETAKKLGIMVIANEV 48 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~ 48 (246)
+.++++++.|.++|+.+|+|-.
T Consensus 80 ~~ld~~v~~a~~~Gl~vild~h 101 (306)
T 2cks_A 80 DRMHQLIDMATARGLYVIVDWH 101 (306)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEec
Confidence 5778999999999999999953
No 337
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=25.83 E-value=1.1e+02 Score=25.33 Aligned_cols=30 Identities=17% Similarity=0.120 Sum_probs=25.0
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.+.+++.++++.|+++|+.|++|-.|+++-
T Consensus 86 ~d~~~~~~~a~~Ak~~GLkVlldfHysD~W 115 (399)
T 1ur4_A 86 NDLEKAIQIGKRATANGMKLLADFHYSDFW 115 (399)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSSSSC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeccCCcc
Confidence 467888889999999999999997776553
No 338
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=25.74 E-value=54 Score=28.72 Aligned_cols=25 Identities=8% Similarity=0.212 Sum_probs=22.6
Q ss_pred ccCCChhhHHHHHHHHHHcCCEEEE
Q 042445 21 GSGFSGSFVSPIAETAKKLGIMVIA 45 (246)
Q Consensus 21 G~~~~~~~~~~l~~~~~~~~~~ii~ 45 (246)
|..|+.+++++|++.|+++++.||-
T Consensus 250 ~~~YT~~di~eiv~yA~~rgI~VIP 274 (572)
T 3ozo_A 250 QKVYTKAAIREVVRFGLERGVRVLP 274 (572)
T ss_dssp SSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcCHHHHHHHHHHHHHhCCceee
Confidence 5689999999999999999998884
No 339
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=25.59 E-value=89 Score=28.94 Aligned_cols=28 Identities=29% Similarity=0.339 Sum_probs=25.3
Q ss_pred hhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.++++++++.|+++|+-||.|-+|.+..
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~a 396 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHTA 396 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeecccc
Confidence 5899999999999999999999997654
No 340
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=25.43 E-value=51 Score=29.27 Aligned_cols=31 Identities=23% Similarity=0.210 Sum_probs=26.5
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.-+.++++++++.|+++|+.||.|-++.+.+
T Consensus 157 ~Gt~~d~~~lv~~~h~~Gi~Vi~D~V~NH~s 187 (655)
T 3ucq_A 157 LGTMDDLSALARALRGRGISLVLDLVLNHVA 187 (655)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEeeccccc
Confidence 4467899999999999999999999877543
No 341
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=25.01 E-value=39 Score=23.61 Aligned_cols=23 Identities=13% Similarity=0.226 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHcCCEEEEccccC
Q 042445 28 FVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 28 ~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
--.+|.++|+++|+.|+.|..-+
T Consensus 81 ~A~~I~e~A~e~gVPi~e~~~LA 103 (144)
T 2jlj_A 81 QVQTVRKIAEEEGVPILQRIPLA 103 (144)
T ss_dssp HHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 45889999999999999998544
No 342
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=24.92 E-value=50 Score=27.37 Aligned_cols=25 Identities=12% Similarity=0.038 Sum_probs=21.7
Q ss_pred ChhhHHHHHHHHHHcCCEEEEcccc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVY 49 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y 49 (246)
..+.++++++.|+++|+.+|+|-..
T Consensus 112 ~l~~ld~vv~~a~~~Gi~VilDlH~ 136 (408)
T 1h4p_A 112 QESYLDQAIGWARNNSLKVWVDLHG 136 (408)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCC
Confidence 4578899999999999999999654
No 343
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=24.84 E-value=71 Score=29.25 Aligned_cols=29 Identities=21% Similarity=0.409 Sum_probs=25.6
Q ss_pred hhHHHHHHHHHHcCCEEEEccccCCcccC
Q 042445 27 SFVSPIAETAKKLGIMVIANEVYGHLAFG 55 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 55 (246)
++++++++.|++.|+-||.|-+|.+..-.
T Consensus 379 ~efk~LV~~aH~~GIkVIlDvV~NHts~~ 407 (884)
T 4aio_A 379 IEYRQMVQALNRIGLRVVMDVVYNHLDSS 407 (884)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSBCSCC
T ss_pred HHHHHHHHHHHhcCCceeeeeccccccCC
Confidence 56999999999999999999999976643
No 344
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=24.36 E-value=48 Score=26.29 Aligned_cols=23 Identities=13% Similarity=0.115 Sum_probs=20.2
Q ss_pred hhhHHHHHHHHHHcCCEEEEccc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEV 48 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~ 48 (246)
.+.++++++.|+++|+.+|.|-.
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~~ 111 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPFV 111 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 56789999999999999999853
No 345
>3q8j_A Asteropsin A, ABU8-1; cystine knot, marine sponge, marine knottin, toxin; HET: PCA; 0.87A {Asteropus}
Probab=23.91 E-value=12 Score=18.51 Aligned_cols=13 Identities=8% Similarity=0.051 Sum_probs=9.2
Q ss_pred cccCCcCCCccCC
Q 042445 12 FSDFQVFHVGSGF 24 (246)
Q Consensus 12 ~~~~p~NPtG~~~ 24 (246)
..+-|+||.|+++
T Consensus 23 ltcipgnpdgtcy 35 (37)
T 3q8j_A 23 LTCIPGNPDGTCY 35 (37)
T ss_dssp EEEEECSSEEEEE
T ss_pred cEecCCCCCceEE
Confidence 4456789988764
No 346
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=23.84 E-value=61 Score=24.74 Aligned_cols=20 Identities=20% Similarity=0.370 Sum_probs=16.8
Q ss_pred HHHHHHHHHcCCEEEEcccc
Q 042445 30 SPIAETAKKLGIMVIANEVY 49 (246)
Q Consensus 30 ~~l~~~~~~~~~~ii~De~y 49 (246)
+++.++|+++++.+|+++-+
T Consensus 86 ~~l~~l~~~~~~~liInd~~ 105 (243)
T 3o63_A 86 EILADAAHRYGALFAVNDRA 105 (243)
T ss_dssp HHHHHHHHHTTCEEEEESCH
T ss_pred HHHHHHHHhhCCEEEEeCHH
Confidence 67888999999999997644
No 347
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=23.38 E-value=87 Score=27.96 Aligned_cols=31 Identities=19% Similarity=0.126 Sum_probs=26.6
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.-+.++++++++.|+++|+.||.|-++.+..
T Consensus 103 ~Gt~~d~~~lv~~~h~~gi~vi~D~V~NH~~ 133 (669)
T 3k8k_A 103 LGTESDFDRLVTEAHNRGIKIYLDYVMNHTG 133 (669)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEECcccCC
Confidence 4467899999999999999999999876544
No 348
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=23.30 E-value=58 Score=25.51 Aligned_cols=23 Identities=4% Similarity=0.057 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHcCCEEEEcccc
Q 042445 27 SFVSPIAETAKKLGIMVIANEVY 49 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~y 49 (246)
+.++++++.|.++|+.+|+|-..
T Consensus 72 ~~~~~~v~~~~~~gi~vild~h~ 94 (305)
T 1h1n_A 72 ADLIATVNAITQKGAYAVVDPHN 94 (305)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCEEEEeccc
Confidence 45788999999999999999644
No 349
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=23.25 E-value=61 Score=27.38 Aligned_cols=24 Identities=8% Similarity=0.032 Sum_probs=20.9
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEV 48 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~ 48 (246)
..+.++++++.|.++|+.+|+|-.
T Consensus 70 ~l~~ld~vv~~a~~~Gl~VIlDlH 93 (464)
T 1wky_A 70 DIQTVRNLISLAEDNNLVAVLEVH 93 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 457899999999999999999853
No 350
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=23.05 E-value=59 Score=26.23 Aligned_cols=24 Identities=17% Similarity=0.084 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHHcCCEEEEccccC
Q 042445 27 SFVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
+.++++++.|.++|+.+|+|-...
T Consensus 84 ~~ld~vV~~a~~~Gi~vIlDlH~~ 107 (340)
T 3qr3_A 84 SKYDQLVQGCLSLGAYCIVDIHNY 107 (340)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECST
T ss_pred HHHHHHHHHHHHCCCEEEEEecCC
Confidence 578899999999999999997544
No 351
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=22.88 E-value=70 Score=25.16 Aligned_cols=24 Identities=25% Similarity=0.133 Sum_probs=20.5
Q ss_pred hhhHHHHHHHHHHcCCEEEEcccc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVY 49 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y 49 (246)
.+.++++++.|.++|+.+|+|-.+
T Consensus 81 ~~~~d~~v~~a~~~Gi~vildlh~ 104 (320)
T 3nco_A 81 LDRVKHVVDVALKNDLVVIINCHH 104 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCC
Confidence 467889999999999999999653
No 352
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=22.87 E-value=59 Score=25.84 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=20.7
Q ss_pred hhHHHHHHHHHHcCCEEEEccccC
Q 042445 27 SFVSPIAETAKKLGIMVIANEVYG 50 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~y~ 50 (246)
+.++++++.|.++|+.+|+|-.+.
T Consensus 69 ~~l~~~v~~a~~~Gi~vildlh~~ 92 (343)
T 1ceo_A 69 SYIDRCLEWCKKYNLGLVLDMHHA 92 (343)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecCC
Confidence 577899999999999999997554
No 353
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=22.53 E-value=81 Score=29.08 Aligned_cols=31 Identities=16% Similarity=0.048 Sum_probs=27.6
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 23 GFSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
.-+.++++++++.|+++|+-||.|-++.+..
T Consensus 689 ~Gt~~df~~lv~~~H~~GI~VilD~V~NH~~ 719 (844)
T 3aie_A 689 YGTADDLVKAIKALHSKGIKVMADWVPDQMY 719 (844)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 3467999999999999999999999998764
No 354
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=22.12 E-value=73 Score=28.24 Aligned_cols=26 Identities=8% Similarity=0.188 Sum_probs=23.3
Q ss_pred CccCCChhhHHHHHHHHHHcCCEEEE
Q 042445 20 VGSGFSGSFVSPIAETAKKLGIMVIA 45 (246)
Q Consensus 20 tG~~~~~~~~~~l~~~~~~~~~~ii~ 45 (246)
.|-.+|.+++++|++.|+++|+-||-
T Consensus 138 ~~~~YT~~di~eiv~yA~~rgI~VIP 163 (627)
T 2epl_X 138 FRGRYTVAELQEIEDYAADFDMSFVP 163 (627)
T ss_dssp TTTCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 35689999999999999999999885
No 355
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=22.03 E-value=32 Score=28.81 Aligned_cols=25 Identities=16% Similarity=0.082 Sum_probs=21.9
Q ss_pred CcCCCccCCChhhHHHHHHHHHHcC
Q 042445 16 QVFHVGSGFSGSFVSPIAETAKKLG 40 (246)
Q Consensus 16 p~NPtG~~~~~~~~~~l~~~~~~~~ 40 (246)
.+-|.|..++.++++.|++++++|+
T Consensus 100 v~~P~Gr~lt~~qLr~LadIAekyG 124 (418)
T 3mm5_A 100 INQPSGWFYSTKALRGLCDVWEKWG 124 (418)
T ss_dssp ECCCGGGEEEHHHHHHHHHHHHHHS
T ss_pred EeCCCCcccCHHHHHHHHHHHHHhC
Confidence 3458898899999999999999986
No 356
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=21.94 E-value=63 Score=25.68 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=18.7
Q ss_pred hhHHHHHHHHHHcCCEEEEcc
Q 042445 27 SFVSPIAETAKKLGIMVIANE 47 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De 47 (246)
+.+++++++|+++|+.+|.|-
T Consensus 91 ~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 91 SDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEc
Confidence 478999999999999999865
No 357
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=21.84 E-value=81 Score=25.93 Aligned_cols=23 Identities=30% Similarity=0.192 Sum_probs=20.5
Q ss_pred hhhHHHHHHHHHHcCCEEEEccc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEV 48 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~ 48 (246)
.+.++++++.|+++|+.+|+|-.
T Consensus 99 ~~~LD~~i~~A~k~GI~viL~l~ 121 (383)
T 3pzg_A 99 FERLDYTIAKAKELGIKLIIVLV 121 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcc
Confidence 56889999999999999999953
No 358
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=21.45 E-value=70 Score=24.64 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=28.7
Q ss_pred CccCCChhhHHHHHHHHHHcCCEEEEccccCCccc
Q 042445 20 VGSGFSGSFVSPIAETAKKLGIMVIANEVYGHLAF 54 (246)
Q Consensus 20 tG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~ 54 (246)
|-.+++.+.+++.++++++||+.+..-..+.+..+
T Consensus 48 t~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~ 82 (251)
T 1qwg_A 48 TSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAY 82 (251)
T ss_dssp GGGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHH
T ss_pred eeeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHH
Confidence 44688999999999999999999988776665444
No 359
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=21.38 E-value=65 Score=25.72 Aligned_cols=24 Identities=17% Similarity=0.246 Sum_probs=20.9
Q ss_pred hhhHHHHHHHHHHcCCEEEEcccc
Q 042445 26 GSFVSPIAETAKKLGIMVIANEVY 49 (246)
Q Consensus 26 ~~~~~~l~~~~~~~~~~ii~De~y 49 (246)
.+.++++++.|.++|+.+|+|-..
T Consensus 94 ~~~ld~~v~~a~~~Gi~vild~h~ 117 (358)
T 1ece_A 94 LQVMDKIVAYAGQIGLRIILDRHR 117 (358)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEecCC
Confidence 467899999999999999999754
No 360
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=21.38 E-value=1.5e+02 Score=18.06 Aligned_cols=29 Identities=10% Similarity=0.119 Sum_probs=21.3
Q ss_pred CCeEEEEeec-ChHHHHHHHHHHHHHHHHH
Q 042445 214 KDWLRITFAV-EPSALENGLGRMKAFYDRH 242 (246)
Q Consensus 214 ~~~iRls~~~-~~~~l~~~~~~l~~~~~~~ 242 (246)
...+|+|+.. +..+.++....+.+.+.++
T Consensus 45 akrvrisitartkkeaekfaailikvfael 74 (106)
T 1qys_A 45 AKRVRISITARTKKEAEKFAAILIKVFAEL 74 (106)
T ss_dssp CSEEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 3567999986 7777777777777776654
No 361
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=21.12 E-value=34 Score=28.81 Aligned_cols=25 Identities=8% Similarity=0.170 Sum_probs=21.9
Q ss_pred CcCCCccCCChhhHHHHHHHHHHcC
Q 042445 16 QVFHVGSGFSGSFVSPIAETAKKLG 40 (246)
Q Consensus 16 p~NPtG~~~~~~~~~~l~~~~~~~~ 40 (246)
.+-|.|..++.++++.|++++++|+
T Consensus 102 V~~P~Gr~lTaeqLR~LadIAekyG 126 (437)
T 3or1_A 102 LAQPAAKYYTAEYLEAICDVWDLRG 126 (437)
T ss_dssp ECCCGGGEEEHHHHHHHHHHHHHHS
T ss_pred EeCCCCCccCHHHHHHHHHHHHHhC
Confidence 3458888899999999999999996
No 362
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=20.86 E-value=92 Score=24.16 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=16.6
Q ss_pred CccCCChhhHHHHHHHHHHc-CCEEEEccccC
Q 042445 20 VGSGFSGSFVSPIAETAKKL-GIMVIANEVYG 50 (246)
Q Consensus 20 tG~~~~~~~~~~l~~~~~~~-~~~ii~De~y~ 50 (246)
+|...+.+.++.+.++++++ +..+++|=++.
T Consensus 80 ~G~l~s~~~i~~v~~~l~~~~~~~vv~DPv~~ 111 (282)
T 3h74_A 80 IGYVGSVALCQQITTYLEQQTLSLLVVDPVLG 111 (282)
T ss_dssp ECCCCSHHHHHHHHHHHHHSCCSEEEECCCCE
T ss_pred ECCCCCHHHHHHHHHHHHHCCCCcEEEcCeee
Confidence 34444555555566655554 35555555444
No 363
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=26.23 E-value=21 Score=23.92 Aligned_cols=27 Identities=7% Similarity=0.096 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHcCCEEEEccccCCccc
Q 042445 28 FVSPIAETAKKLGIMVIANEVYGHLAF 54 (246)
Q Consensus 28 ~~~~l~~~~~~~~~~ii~De~y~~~~~ 54 (246)
--.+|.++++++|+.|+.|..-.-..+
T Consensus 28 ~A~~I~e~A~e~gVPi~e~~~LAr~Ly 54 (114)
T 3b0z_B 28 IALRIREIGAEHRVPTLEAPPLARALY 54 (114)
Confidence 357899999999999999987664443
No 364
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=20.36 E-value=75 Score=23.47 Aligned_cols=46 Identities=9% Similarity=0.033 Sum_probs=35.0
Q ss_pred HHHHHHHHHhcCeEEecCCCcCCCCeEEEEeecChHHHHHHHHHHHHHHH
Q 042445 191 MEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALENGLGRMKAFYD 240 (246)
Q Consensus 191 ~~~~~~ll~~~gi~v~pg~~f~~~~~iRls~~~~~~~l~~~~~~l~~~~~ 240 (246)
.......|.+.||-+.--+ +.-+++|+..++++.+++++.|-+.+.
T Consensus 132 aak~F~aLa~~~INI~mIs----tSEi~IS~vV~~~d~~~Av~aLH~~F~ 177 (200)
T 4go7_X 132 TATFCEALAAVGVNIELIS----TSEIRISVLCRDTELDKAVVALHEAFG 177 (200)
T ss_dssp HHHHHHHHHHTTCCCCEEE----ECSSEEEEEEEGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEEE----ccCCEEEEEEeHHHHHHHHHHHHHHhC
Confidence 3344556778888765432 467799999999999999999988874
No 365
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=20.23 E-value=75 Score=30.13 Aligned_cols=30 Identities=10% Similarity=0.071 Sum_probs=26.8
Q ss_pred CChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 24 FSGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
-+.++++++++.|+++|+-||.|-++.+..
T Consensus 910 Gt~edfk~LV~alH~~GI~VIlDvV~NHta 939 (1108)
T 3ttq_A 910 GTDGDLRATIQALHHANMQVMADVVDNQVY 939 (1108)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 357899999999999999999999998654
No 366
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=20.22 E-value=59 Score=29.34 Aligned_cols=29 Identities=28% Similarity=0.367 Sum_probs=26.4
Q ss_pred ChhhHHHHHHHHHHcCCEEEEccccCCcc
Q 042445 25 SGSFVSPIAETAKKLGIMVIANEVYGHLA 53 (246)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 53 (246)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 64 t~edfk~LV~aaH~~GIkVIlDvV~NHta 92 (720)
T 1iv8_A 64 GEKEYRRLIETAHTIGLGIIQDIVPNHMA 92 (720)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 47899999999999999999999998766
No 367
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=20.13 E-value=66 Score=25.86 Aligned_cols=25 Identities=28% Similarity=0.111 Sum_probs=21.5
Q ss_pred hhHHHHHHHHHHcCCEEEEccccCC
Q 042445 27 SFVSPIAETAKKLGIMVIANEVYGH 51 (246)
Q Consensus 27 ~~~~~l~~~~~~~~~~ii~De~y~~ 51 (246)
+.++++++.|.++|+.+|+|-.+..
T Consensus 83 ~~l~~~v~~a~~~Gi~vildlH~~~ 107 (345)
T 3ndz_A 83 KRVEEIANYAFDNDMYVIINLHHEN 107 (345)
T ss_dssp HHHHHHHHHHHTTTCEEEECCCSCT
T ss_pred HHHHHHHHHHHHCCCEEEEecCCcc
Confidence 6789999999999999999976553
Done!