Query 042447
Match_columns 355
No_of_seqs 190 out of 1837
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 10:33:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042447.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042447hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 9.7E-53 3.3E-57 418.4 27.2 259 37-307 24-413 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 4.5E-50 1.5E-54 397.3 31.0 281 33-338 13-365 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 4.9E-47 1.7E-51 371.0 29.2 223 40-279 14-304 (376)
4 2uvf_A Exopolygalacturonase; G 100.0 4.1E-44 1.4E-48 369.3 28.6 239 37-286 153-497 (608)
5 1czf_A Polygalacturonase II; b 100.0 1.1E-42 3.7E-47 338.0 22.7 260 39-326 28-345 (362)
6 2iq7_A Endopolygalacturonase; 100.0 2.5E-42 8.5E-47 333.1 22.2 256 55-327 6-321 (339)
7 1hg8_A Endopolygalacturonase; 100.0 5.5E-42 1.9E-46 331.7 23.9 255 56-326 7-332 (349)
8 1nhc_A Polygalacturonase I; be 100.0 3.9E-42 1.3E-46 331.4 21.9 256 55-327 6-320 (336)
9 1ia5_A Polygalacturonase; glyc 100.0 8.1E-42 2.8E-46 329.4 22.4 254 56-326 11-322 (339)
10 1k5c_A Endopolygalacturonase; 100.0 6.7E-41 2.3E-45 322.2 17.3 250 57-328 8-317 (335)
11 2x6w_A Tail spike protein; vir 100.0 7.5E-38 2.6E-42 314.8 19.7 250 39-308 50-385 (600)
12 3gq8_A Preneck appendage prote 100.0 5E-34 1.7E-38 288.3 22.4 249 39-310 21-312 (609)
13 1h80_A IOTA-carrageenase; hydr 100.0 4.5E-33 1.5E-37 277.1 28.4 232 38-287 19-278 (464)
14 3gqn_A Preneck appendage prote 100.0 6.5E-34 2.2E-38 291.7 19.8 250 39-310 21-312 (772)
15 1x0c_A Isopullulanase; glycosi 100.0 2.2E-30 7.7E-35 263.1 15.1 259 40-325 142-518 (549)
16 1ogo_X Dextranase; hydrolase, 100.0 2.3E-27 7.8E-32 241.2 22.5 235 70-325 229-543 (574)
17 2vbk_A Tailspike-protein; vira 99.9 1E-27 3.5E-32 230.5 11.4 253 38-309 49-351 (514)
18 2pyg_A Poly(beta-D-mannuronate 99.9 3E-25 1E-29 216.2 22.8 241 40-306 2-292 (377)
19 3eqn_A Glucan 1,3-beta-glucosi 99.9 2.5E-20 8.6E-25 191.4 23.2 214 22-274 30-265 (758)
20 1k5c_A Endopolygalacturonase; 99.6 1.8E-15 6.1E-20 145.2 15.1 156 156-322 158-331 (335)
21 2uvf_A Exopolygalacturonase; G 99.6 1.3E-14 4.3E-19 149.6 16.3 166 157-324 388-581 (608)
22 1ogo_X Dextranase; hydrolase, 99.5 1.6E-12 5.3E-17 132.3 21.7 218 72-306 264-545 (574)
23 3jur_A EXO-poly-alpha-D-galact 99.5 6.3E-13 2.2E-17 132.0 14.4 182 122-306 191-443 (448)
24 1x0c_A Isopullulanase; glycosi 99.4 2.6E-12 9E-17 130.5 19.2 226 72-306 222-520 (549)
25 1rmg_A Rgase A, rhamnogalactur 99.3 3.6E-11 1.2E-15 118.6 18.7 151 159-326 137-339 (422)
26 1czf_A Polygalacturonase II; b 99.3 9.3E-11 3.2E-15 113.5 16.2 130 162-308 139-281 (362)
27 2iq7_A Endopolygalacturonase; 99.2 2.1E-10 7.3E-15 110.0 16.1 134 159-308 110-256 (339)
28 1nhc_A Polygalacturonase I; be 99.2 3.1E-10 1.1E-14 108.8 17.1 131 162-309 113-256 (336)
29 1ia5_A Polygalacturonase; glyc 99.2 2.6E-10 9E-15 109.4 16.0 131 162-308 117-260 (339)
30 1bhe_A PEHA, polygalacturonase 99.2 8E-10 2.7E-14 107.5 18.0 138 159-309 161-306 (376)
31 1hg8_A Endopolygalacturonase; 99.2 5.8E-10 2E-14 107.4 16.4 120 177-308 128-268 (349)
32 2inu_A Insulin fructotransfera 99.2 1.4E-09 4.8E-14 105.0 18.9 202 37-257 11-260 (410)
33 1h80_A IOTA-carrageenase; hydr 99.0 1.4E-09 4.9E-14 108.1 13.1 129 178-317 134-284 (464)
34 3eqn_A Glucan 1,3-beta-glucosi 99.0 1.9E-09 6.6E-14 111.1 13.2 151 38-198 398-581 (758)
35 3gq8_A Preneck appendage prote 98.7 6.6E-07 2.3E-11 90.8 19.8 151 121-278 134-308 (609)
36 3gqn_A Preneck appendage prote 98.7 6.1E-07 2.1E-11 92.7 19.5 150 121-277 134-307 (772)
37 2x6w_A Tail spike protein; vir 98.7 2.6E-08 8.8E-13 100.7 8.6 127 159-308 184-344 (600)
38 1pcl_A Pectate lyase E; lyase 98.5 4E-06 1.4E-10 80.5 18.4 136 130-275 80-250 (355)
39 2pyg_A Poly(beta-D-mannuronate 98.5 1.2E-06 4E-11 84.6 13.9 119 174-308 193-334 (377)
40 1pxz_A Major pollen allergen J 98.3 1.5E-05 5.3E-10 76.2 15.3 113 158-274 114-248 (346)
41 1ru4_A Pectate lyase, PEL9A; p 98.3 6.8E-06 2.3E-10 80.3 12.9 43 39-84 15-59 (400)
42 3zsc_A Pectate trisaccharide-l 98.2 2.7E-05 9.1E-10 74.2 16.0 113 158-273 91-215 (340)
43 2qy1_A Pectate lyase II; GAG l 98.2 1E-05 3.5E-10 77.0 13.1 137 129-275 71-227 (330)
44 1vbl_A Pectate lyase 47; PL 47 98.2 2.6E-06 8.8E-11 83.4 7.7 136 129-274 131-304 (416)
45 2x3h_A K5 lyase, K5A lyase; ba 98.2 5.3E-05 1.8E-09 69.9 15.3 241 39-310 63-341 (542)
46 3vmv_A Pectate lyase; polysacc 98.1 3.3E-05 1.1E-09 73.2 13.2 132 130-274 79-226 (326)
47 2o04_A Pectate lyase, PL; hexa 98.1 5.3E-06 1.8E-10 80.8 7.7 135 129-274 126-298 (399)
48 1idk_A Pectin lyase A; signal, 98.0 5.6E-05 1.9E-09 72.6 13.4 131 129-276 107-258 (359)
49 1pe9_A Pectate lyase A; parall 98.0 1.5E-05 5E-10 76.7 8.1 114 158-274 114-260 (361)
50 1qcx_A Pectin lyase B; beta-he 97.9 0.00014 4.7E-09 70.0 13.5 130 130-276 108-258 (359)
51 1gq8_A Pectinesterase; hydrola 97.9 0.00069 2.4E-08 64.0 17.9 135 158-306 94-242 (319)
52 1air_A Pectate lyase C, PELC; 97.9 7.1E-05 2.4E-09 71.8 11.0 132 130-275 89-238 (353)
53 1xg2_A Pectinesterase 1; prote 97.7 0.001 3.5E-08 62.8 16.0 134 158-306 90-238 (317)
54 1dbg_A Chondroitinase B; beta 97.6 0.0007 2.4E-08 67.9 14.1 44 57-103 31-76 (506)
55 2nsp_A Pectinesterase A; micha 97.6 0.0078 2.7E-07 57.3 19.8 79 158-249 96-192 (342)
56 3uw0_A Pectinesterase; right-h 97.3 0.0085 2.9E-07 57.5 17.0 111 158-279 122-255 (364)
57 1pxz_A Major pollen allergen J 96.9 0.0076 2.6E-07 57.5 11.9 73 177-258 106-203 (346)
58 1pcl_A Pectate lyase E; lyase 96.7 0.012 4E-07 56.3 11.7 80 178-258 97-203 (355)
59 3grh_A YBHC, acyl-COA thioeste 96.1 0.25 8.7E-06 47.9 16.9 111 158-279 201-331 (422)
60 3zsc_A Pectate trisaccharide-l 96.0 0.015 5.2E-07 55.1 8.1 71 178-257 84-168 (340)
61 1pe9_A Pectate lyase A; parall 96.0 0.02 6.7E-07 54.9 8.8 100 178-277 104-241 (361)
62 1ru4_A Pectate lyase, PEL9A; p 95.9 0.029 1E-06 54.5 9.5 94 158-257 161-276 (400)
63 1air_A Pectate lyase C, PELC; 95.9 0.019 6.5E-07 54.8 8.0 98 177-275 103-216 (353)
64 3vmv_A Pectate lyase; polysacc 95.8 0.027 9.2E-07 53.2 8.6 92 177-276 95-206 (326)
65 2qy1_A Pectate lyase II; GAG l 95.7 0.042 1.4E-06 52.0 9.4 100 177-276 86-206 (330)
66 3t9g_A Pectate lyase; PL3, par 95.6 0.3 1E-05 42.1 13.6 49 158-213 52-101 (196)
67 1vbl_A Pectate lyase 47; PL 47 95.6 0.027 9.2E-07 55.0 8.0 98 178-276 149-284 (416)
68 1ee6_A Pectate lyase; parallel 95.4 0.27 9.4E-06 42.4 12.5 42 158-205 48-90 (197)
69 2inu_A Insulin fructotransfera 95.4 0.15 5.2E-06 49.2 12.1 95 156-259 134-237 (410)
70 1qcx_A Pectin lyase B; beta-he 95.2 0.61 2.1E-05 44.5 15.9 138 124-275 126-280 (359)
71 2o04_A Pectate lyase, PL; hexa 95.1 0.056 1.9E-06 52.4 8.2 97 178-276 144-278 (399)
72 1idk_A Pectin lyase A; signal, 94.7 0.05 1.7E-06 52.1 6.6 66 177-250 124-199 (359)
73 3b4n_A Endo-pectate lyase; pec 93.3 1.1 3.8E-05 41.8 12.6 68 131-205 124-201 (344)
74 3riq_A Tailspike protein; righ 91.2 2.5 8.6E-05 40.5 12.2 57 208-274 308-364 (543)
75 3ju4_A Endo-N-acetylneuraminid 90.0 0.11 3.7E-06 50.2 1.8 40 46-88 4-43 (670)
76 2vfm_A Bifunctional tail prote 88.2 2 6.7E-05 40.5 8.8 91 208-310 317-407 (559)
77 2v5i_A Salmonella typhimurium 88.1 1.7 6E-05 40.9 8.4 91 208-310 320-410 (559)
78 2xc1_A Bifunctional tail prote 84.3 3.3 0.00011 40.5 8.4 57 208-274 424-480 (666)
79 1gq8_A Pectinesterase; hydrola 83.3 6.4 0.00022 36.7 10.0 116 179-309 89-211 (319)
80 1xg2_A Pectinesterase 1; prote 79.8 7.7 0.00026 36.1 9.1 116 179-309 85-207 (317)
81 1dbg_A Chondroitinase B; beta 71.2 18 0.00061 35.9 9.6 93 158-257 252-358 (506)
82 2nsp_A Pectinesterase A; micha 60.2 1E+02 0.0034 28.7 12.1 112 184-309 95-232 (342)
83 2x3h_A K5 lyase, K5A lyase; ba 47.6 69 0.0023 29.6 8.2 40 238-278 166-206 (542)
84 2vbk_A Tailspike-protein; vira 41.0 49 0.0017 32.3 6.5 36 184-219 178-230 (514)
85 3uw0_A Pectinesterase; right-h 37.8 1.9E+02 0.0066 27.1 10.1 113 184-309 121-257 (364)
86 1j5p_A Aspartate dehydrogenase 34.6 22 0.00076 31.9 2.9 24 58-81 98-121 (253)
87 2vfm_A Bifunctional tail prote 29.0 1.6E+02 0.0056 27.7 7.6 69 207-278 269-355 (559)
88 1tif_A IF3-N, translation init 24.4 9.7 0.00033 27.8 -1.1 31 13-47 33-63 (78)
89 2xc1_A Bifunctional tail prote 22.5 2.4E+02 0.008 27.8 7.6 69 207-278 376-462 (666)
90 3qec_A Putative carbohydrate b 21.1 1.1E+02 0.0038 25.0 4.5 15 77-91 104-118 (150)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=9.7e-53 Score=418.41 Aligned_cols=259 Identities=27% Similarity=0.438 Sum_probs=207.0
Q ss_pred CceEEEeeecCCCCCCCcchHHHHHHHHHHhhcCCCcEEEEcCCeEEEEeeeeeeccccccEEEEEceEEeecCCCCCCC
Q 042447 37 GKVLVNVDSFGAAGDGVSDDTQAFLNAWNTACSTPKSVFLVPAGRHYLVSATRFKGPCADKLVIQIDGTIVAPAEPDNWD 116 (355)
Q Consensus 37 ~~~~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~gg~~V~iP~G~tY~i~~~~l~~p~~~~~~l~~~g~l~~~~~~~~~~ 116 (355)
++.++||++|||+|||++|||+|||+||+++++.++++|+||+|+ |+++++.|+ ++++|+++|+|++++++.+|.
T Consensus 24 ~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~c~~~ggg~v~vP~G~-yl~~~l~l~----s~v~l~l~gtL~~s~d~~~y~ 98 (448)
T 3jur_A 24 PDREVNLLDFGARGDGRTDCSESFKRAIEELSKQGGGRLIVPEGV-FLTGPIHLK----SNIELHVKGTIKFIPDPERYL 98 (448)
T ss_dssp CSCEEEGGGGTCCCEEEEECHHHHHHHHHHHHHHTCEEEEECSSE-EEESCEECC----TTEEEEESSEEEECCCGGGGC
T ss_pred CCcEEEEEecccCCCCCeecHHHHHHHHHhhhhcCCeEEEECCCc-EEEeeeEeC----CCcEEEEEEEEEecCCHHHhC
Confidence 346899999999999999999999999996444578999999995 999998876 688999999999999999883
Q ss_pred ccC-----------cceEEEEEeccCeEEecceEEECcC--CccccCCCC------------------------------
Q 042447 117 PKL-----------ARIWLDFSKLNGVLFQGSGVIDGSG--SKWWASSCK------------------------------ 153 (355)
Q Consensus 117 ~~~-----------~~~~i~~~~~~ni~I~G~G~IdG~G--~~~~~~~~~------------------------------ 153 (355)
+.. ..+||++.+++||+|+|.|+|||+| +.||...+.
T Consensus 99 p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~ 178 (448)
T 3jur_A 99 PVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVE 178 (448)
T ss_dssp SCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHHHTCCGG
T ss_pred cccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhcccCcch
Confidence 221 1357899999999999999999999 899974220
Q ss_pred --------CCCc-------------------------------ccEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEE
Q 042447 154 --------KNKS-------------------------------ESVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKI 194 (355)
Q Consensus 154 --------~~~~-------------------------------~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i 194 (355)
..++ +||+|++++|.++ .+|+||||+.+|+||+|+||+|
T Consensus 179 ~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I~n~~i 256 (448)
T 3jur_A 179 ERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRF 256 (448)
T ss_dssp GCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEEESCEE
T ss_pred hhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEEEeeEE
Confidence 0111 4566666666554 6899999999999999999999
Q ss_pred ecCCceEEeecC-----------CccEEEEeeEE--cCCc-eEEeccCCcccccceEEEEEEecceecCCceeEEEEEec
Q 042447 195 GTGDDCISIVNG-----------SSAIKMKRIFC--GPGH-GISIGSLGKDNSMGIVTKVVLDTAYLRETANGLRIKTWQ 260 (355)
Q Consensus 195 ~~gDD~I~ik~g-----------~~ni~i~n~~~--~~~~-Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~ 260 (355)
.++||||++|++ ++||+|+||+| .++| |++|||++ .+.|+||+|+||++.++.+|++||+|.
T Consensus 257 ~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~----~~~v~nV~v~n~~~~~t~~GirIKt~~ 332 (448)
T 3jur_A 257 DTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM----SGGVRNVVARNNVYMNVERALRLKTNS 332 (448)
T ss_dssp EESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC----TTCEEEEEEESCEEESCSEEEEEECCT
T ss_pred EeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc----cCcEEEEEEEEEEEecccceEEEEEEc
Confidence 999999999998 79999999999 6677 89999984 467999999999999999999999987
Q ss_pred cCCeE-----------------------------------EeeEEEEeEEEeecCcccEEEEcCCCCceeCEEEEeEEEE
Q 042447 261 TSAVK-----------------------------------ISQIMYRNISGTTKSSKAMKFACSDTVPCSDIVLSNVNLE 305 (355)
Q Consensus 261 ~~~~~-----------------------------------i~nItf~NI~g~~~~~~~i~i~~~~~~~~~nI~~~nV~i~ 305 (355)
..++. |+||+|+||+++. ...++.|.|.++.||+||+|+||+|+
T Consensus 333 g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~-~~~~i~i~g~~~~p~~~I~~~nv~i~ 411 (448)
T 3jur_A 333 RRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATG-GKYAVRIEGLENDYVKDILISDTIIE 411 (448)
T ss_dssp TTCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEE-CSEEEEEECBTTBCEEEEEEEEEEEE
T ss_pred CCCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEe-cceEEEEEeCCCCCEeeEEEEEEEEE
Confidence 44444 4555555555544 34455666666666666666666666
Q ss_pred eC
Q 042447 306 KK 307 (355)
Q Consensus 306 ~~ 307 (355)
..
T Consensus 412 ~~ 413 (448)
T 3jur_A 412 GA 413 (448)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=4.5e-50 Score=397.32 Aligned_cols=281 Identities=26% Similarity=0.490 Sum_probs=231.4
Q ss_pred ccCCCceEEEeeecCCCCCCCcchHHHHHHHHHHhhcCCCcEEEEcCCeEEEEee-eeeeccccccEEEEEceEEeecCC
Q 042447 33 SERGGKVLVNVDSFGAAGDGVSDDTQAFLNAWNTACSTPKSVFLVPAGRHYLVSA-TRFKGPCADKLVIQIDGTIVAPAE 111 (355)
Q Consensus 33 ~~~~~~~~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~gg~~V~iP~G~tY~i~~-~~l~~p~~~~~~l~~~g~l~~~~~ 111 (355)
+++....+++|++|||++||++|||+|||+||+ +|+ ++++|+||+|+ |++++ +.|+++ ++++|+++|+++...+
T Consensus 13 ~~~~~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~-~g~~V~vP~G~-Yli~~~l~l~g~--s~v~l~l~G~~l~~~~ 87 (422)
T 1rmg_A 13 STKGATKTCNILSYGAVADNSTDVGPAITSAWA-ACK-SGGLVYIPSGN-YALNTWVTLTGG--SATAIQLDGIIYRTGT 87 (422)
T ss_dssp HHHHHHCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHT-BTCEEEECSSE-EEECSCEEEESC--EEEEEEECSEEEECCC
T ss_pred hhccCCcEEEeeeccccCCCCcccHHHHHHHHH-HCC-CCCEEEECCCe-EEeCCceeecCC--CeEEEEEcCcEEcccC
Confidence 333345689999999999999999999999999 576 48899999995 99986 899874 6889999999887643
Q ss_pred CCCCCccCcceEE---EEEeccCeEEecceEEECcCCccccCCCCCC-----------------------------Cccc
Q 042447 112 PDNWDPKLARIWL---DFSKLNGVLFQGSGVIDGSGSKWWASSCKKN-----------------------------KSES 159 (355)
Q Consensus 112 ~~~~~~~~~~~~i---~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~~-----------------------------~~~n 159 (355)
.. ..|+ +..++++++|+|.|+|||+|+.||.....+. .++|
T Consensus 88 ~~-------~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~~~~rp~~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~n 160 (422)
T 1rmg_A 88 AS-------GNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAEGTYGARILRLTDVTHFSVHDIILVDAPAFHFTMDTCSD 160 (422)
T ss_dssp CS-------SEEEEEEEEEEEEEECSSSCCEEECCTHHHHTTTCCCCEEEEEEEEEEEEEEEEEEECCSSCSEEEEEEEE
T ss_pred CC-------CceEEEEecCceeEEeeccCEEEECCcchhhcCCCCCceEEEEcccceEEEECeEEECCCceEEEEeCcCC
Confidence 21 2343 4566677788999999999999996421111 1267
Q ss_pred EEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcCCceEEeccCCcccccceEEE
Q 042447 160 VRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGPGHGISIGSLGKDNSMGIVTK 239 (355)
Q Consensus 160 v~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~n 239 (355)
|+|++++|++ .+.+|+|||++.+ +||+|+||+|.++||||++|++++||+|+||+|.++|||+|||+|.+ +.++|
T Consensus 161 v~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~~---~~v~n 235 (422)
T 1rmg_A 161 GEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGAD---TDVTD 235 (422)
T ss_dssp EEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECTT---EEEEE
T ss_pred EEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCCC---CcEEE
Confidence 7777777776 4457999999998 99999999999999999999999999999999999999999998753 47999
Q ss_pred EEEecceecCCceeEEEEEecc-----------------------------------CCeEEeeEEEEeEEEeecC---c
Q 042447 240 VVLDTAYLRETANGLRIKTWQT-----------------------------------SAVKISQIMYRNISGTTKS---S 281 (355)
Q Consensus 240 V~i~n~~~~~~~~gi~Ik~~~~-----------------------------------~~~~i~nItf~NI~g~~~~---~ 281 (355)
|+|+||++.++.+|++||+|.+ ..+.|+||+|+||+++... .
T Consensus 236 V~v~n~~~~~~~~Gi~Ikt~~g~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~g~~~ 315 (422)
T 1rmg_A 236 IVYRNVYTWSSNQMYMIKSNGGSGTVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEANGATR 315 (422)
T ss_dssp EEEEEEEEESSSCSEEEEEBBCCEEEEEEEEEEEEEEEESCSEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESCTTTS
T ss_pred EEEEeEEEeccceEEEEEecCCCcEEEEEEEEeEEEECccccEEEEeeccCCCcccCCCceEEEEEEEeEEEEecccccc
Confidence 9999999999999999998641 2357888888888877642 3
Q ss_pred ccEEEEcCCCCceeCEEEEeEEEEeCCCc-ceeeeeeeEEeeceeccCCCCccCCCCC
Q 042447 282 KAMKFACSDTVPCSDIVLSNVNLEKKDGT-VETYCNSAQGIGYGIVHPSADCLTSNDK 338 (355)
Q Consensus 282 ~~i~i~~~~~~~~~nI~~~nV~i~~~~g~-~~~~c~n~~g~~~~~~~p~~~c~~~~~~ 338 (355)
.++.|.|.+..+|+||+|+||+|+...|. ..+.|+|+.|.. .|++++++
T Consensus 316 ~~i~i~~~~~~~~~ni~l~nv~i~~~~g~~~~~~C~n~~g~g--------~C~~~~~~ 365 (422)
T 1rmg_A 316 PPIRVVCSDTAPCTDLTLEDIAIWTESGSSELYLCRSAYGSG--------YCLKDSSS 365 (422)
T ss_dssp CSEEEECBTTBCEEEEEEEEEEEEESSSSCEEEEEESEEEES--------TTCBCCSS
T ss_pred eeEEEEeCCCCcEeeEEEEeEEEEcCCCCccceEEECCCccc--------cccCCCCC
Confidence 57999999999999999999999998765 578999999864 49988875
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=4.9e-47 Score=371.04 Aligned_cols=223 Identities=25% Similarity=0.388 Sum_probs=183.1
Q ss_pred EEEeeecCCCCCCCcchHHHHHHHHHHhhcCCCcEEEEcC---CeEEEEeeeeeeccccccEEEEEc--eEEeecCCCCC
Q 042447 40 LVNVDSFGAAGDGVSDDTQAFLNAWNTACSTPKSVFLVPA---GRHYLVSATRFKGPCADKLVIQID--GTIVAPAEPDN 114 (355)
Q Consensus 40 ~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~gg~~V~iP~---G~tY~i~~~~l~~p~~~~~~l~~~--g~l~~~~~~~~ 114 (355)
+|+|++|| .+|||+|||+||+ +|+. |++|+||+ | +|+++++.|+ ++++|+++ ++|++++++.+
T Consensus 14 ~~~v~~~G-----~~~dT~aiq~Ai~-ac~~-Gg~v~~~~~~~g-~yl~g~i~l~----s~vtL~l~~Ga~L~~s~~~~~ 81 (376)
T 1bhe_A 14 SCTTLKAD-----SSTATSTIQKALN-NCDQ-GKAVRLSAGSTS-VFLSGPLSLP----SGVSLLIDKGVTLRAVNNAKS 81 (376)
T ss_dssp EEEEEECC-----SSBCHHHHHHHHT-TCCT-TCEEEEECSSSS-EEEESCEECC----TTCEEEECTTCEEEECSCSGG
T ss_pred eEEECCCC-----CCccHHHHHHHHH-Hhcc-CCcEEEECCCCc-eEEEeEEEEC----CCCEEEECCCeEEEeCCCHHH
Confidence 69999986 4799999999999 5887 66777765 6 5999998887 45666666 49999998888
Q ss_pred CCccC------------cceEEEEEeccCeEEecceEEECcC--------CccccCC--------C-CCC----------
Q 042447 115 WDPKL------------ARIWLDFSKLNGVLFQGSGVIDGSG--------SKWWASS--------C-KKN---------- 155 (355)
Q Consensus 115 ~~~~~------------~~~~i~~~~~~ni~I~G~G~IdG~G--------~~~~~~~--------~-~~~---------- 155 (355)
|+... ...||++.+.+||+|+|.|+|||+| +.||... + .+.
T Consensus 82 y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~n 161 (376)
T 1bhe_A 82 FENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKN 161 (376)
T ss_dssp GBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEE
T ss_pred CcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceE
Confidence 86431 2468999999999999999999999 5788631 0 000
Q ss_pred -------------------CcccEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEEecCCceEEeec-----CCccEE
Q 042447 156 -------------------KSESVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGTGDDCISIVN-----GSSAIK 211 (355)
Q Consensus 156 -------------------~~~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~-----g~~ni~ 211 (355)
.+++++|++++|+++...+|+||||+.+|+||+|+||+|.++||||++|+ +++||+
T Consensus 162 v~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s~nI~ 241 (376)
T 1bhe_A 162 FTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNIS 241 (376)
T ss_dssp EEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEEEE
T ss_pred EEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCCCCCceEEE
Confidence 12678888888888777899999999999999999999999999999996 799999
Q ss_pred EEeeEEcCCceEEeccCCcccccceEEEEEEecceecCCceeEEEEEeccCCeEEeeEEEEeEEEeec
Q 042447 212 MKRIFCGPGHGISIGSLGKDNSMGIVTKVVLDTAYLRETANGLRIKTWQTSAVKISQIMYRNISGTTK 279 (355)
Q Consensus 212 i~n~~~~~~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~ 279 (355)
|+||+|+++||++|||+. . .++||+|+||++.++.+|++||+|++.++.++||+|+||++...
T Consensus 242 I~n~~~~~ghGisiGSe~----~-~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~~~v 304 (376)
T 1bhe_A 242 ILHNDFGTGHGMSIGSET----M-GVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNV 304 (376)
T ss_dssp EEEEEECSSSCEEEEEEE----S-SEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESC
T ss_pred EEeeEEEccccEEeccCC----c-cEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEEeCC
Confidence 999999999999999984 2 69999999999999999999999975555566666666655443
No 4
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=4.1e-44 Score=369.34 Aligned_cols=239 Identities=26% Similarity=0.403 Sum_probs=195.8
Q ss_pred CceEEEeeecCCCCCCCcchHHHHHHHHHHhhcCCCcEEEEcCCeEEEEeeeeeeccccccEEEEE--ceEEeecCCCCC
Q 042447 37 GKVLVNVDSFGAAGDGVSDDTQAFLNAWNTACSTPKSVFLVPAGRHYLVSATRFKGPCADKLVIQI--DGTIVAPAEPDN 114 (355)
Q Consensus 37 ~~~~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~gg~~V~iP~G~tY~i~~~~l~~p~~~~~~l~~--~g~l~~~~~~~~ 114 (355)
.+..+||++|||+|||++|||+|||+||+ +|+. |++|+||+|+ |+++++.|+ ++++|++ +|+|+++.+..+
T Consensus 153 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~-g~~v~vP~G~-y~~g~i~lk----s~v~L~l~~gatL~~s~d~~~ 225 (608)
T 2uvf_A 153 KPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP-GCRVEIPAGT-YKSGALWLK----SDMTLNLQAGAILLGSENPDD 225 (608)
T ss_dssp CCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT-TEEEEECSEE-EEECCEECC----SSEEEEECTTEEEEECSCGGG
T ss_pred CCCEEecccccccCCCCccCHHHHHHHHH-hcCC-CCEEEECCCc-eEecceecc----CceEEEecCCcEEEecCCHHH
Confidence 35689999999999999999999999998 5876 8899999995 999998886 5677777 799999998888
Q ss_pred CCccC----------cceEEEEEe--------ccCeEEecceEEECcCCccccCC------------------C------
Q 042447 115 WDPKL----------ARIWLDFSK--------LNGVLFQGSGVIDGSGSKWWASS------------------C------ 152 (355)
Q Consensus 115 ~~~~~----------~~~~i~~~~--------~~ni~I~G~G~IdG~G~~~~~~~------------------~------ 152 (355)
|+... ...+|++.+ ++||+|+|.|+|||+|..||... |
T Consensus 226 y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~ 305 (608)
T 2uvf_A 226 YPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKVHEDG 305 (608)
T ss_dssp SCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTHHHHB
T ss_pred CcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCcccccccccccccccccccccccccccccccccc
Confidence 86310 114566665 69999999999999998886310 0
Q ss_pred -----------------------CC------CCcccEEEEEEEEeCC----------------------CCCCCCceeee
Q 042447 153 -----------------------KK------NKSESVRVYQVLVSAP----------------------EDSPNTDGIHI 181 (355)
Q Consensus 153 -----------------------~~------~~~~nv~i~~v~I~~~----------------------~~~~n~DGi~~ 181 (355)
.+ ..++|++|++++|.++ ...+|+|||++
T Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi 385 (608)
T 2uvf_A 306 ILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQTYDANNGDGIEF 385 (608)
T ss_dssp SHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEECTTCTTCCSEEE
T ss_pred cccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcCCCCCCCCeEEe
Confidence 00 0124555555555543 23579999999
Q ss_pred cCcccEEEEeeEEecCCceEEeecC----------CccEEEEeeEEcCCceE-EeccCCcccccceEEEEEEecceecCC
Q 042447 182 TESTNVVLQDCKIGTGDDCISIVNG----------SSAIKMKRIFCGPGHGI-SIGSLGKDNSMGIVTKVVLDTAYLRET 250 (355)
Q Consensus 182 ~~s~nv~I~n~~i~~gDD~I~ik~g----------~~ni~i~n~~~~~~~Gi-~iGS~g~~~~~~~v~nV~i~n~~~~~~ 250 (355)
.+|++|+|+||+|.+|||||++|++ ++||+|+||+|+++||+ .|||+ ..+.|+||+|+||++.++
T Consensus 386 ~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~n~~~~~t 461 (608)
T 2uvf_A 386 GNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAENNVMYLT 461 (608)
T ss_dssp ESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEESCEEESC
T ss_pred cCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEEeEEEECC
Confidence 9999999999999999999999987 78999999999999986 58996 457899999999999999
Q ss_pred ceeEEEEEeccCCeEEeeEEEEeEEEeecCcccEEE
Q 042447 251 ANGLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKF 286 (355)
Q Consensus 251 ~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i 286 (355)
.+|++||+|.+.++.++||+|+||++......++.|
T Consensus 462 ~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I 497 (608)
T 2uvf_A 462 DIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVM 497 (608)
T ss_dssp SEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEE
T ss_pred CceEEEeeecCCCceEECcEEEeeEEEccccccEEE
Confidence 999999999888889999999999987753345544
No 5
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.1e-42 Score=337.99 Aligned_cols=260 Identities=23% Similarity=0.364 Sum_probs=205.5
Q ss_pred eEEEeeecCCCCCCCcchHHHHHHHHHHhhcC-CCcEEEEcCCeEEEEeee-eeeccccccEEEEEceEEeecCCCCCCC
Q 042447 39 VLVNVDSFGAAGDGVSDDTQAFLNAWNTACST-PKSVFLVPAGRHYLVSAT-RFKGPCADKLVIQIDGTIVAPAEPDNWD 116 (355)
Q Consensus 39 ~~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~-gg~~V~iP~G~tY~i~~~-~l~~p~~~~~~l~~~g~l~~~~~~~~~~ 116 (355)
.+|.|++ ++|||+|+++ |+. ++++|+||+|+ |+. + .| .++++|+++|.+.+. ...|.
T Consensus 28 ~~Ctv~~-----------~~aiq~ai~~-c~~~~g~~v~vP~G~-~l~--l~~l----~~~~~l~~~g~~~~~--~~~w~ 86 (362)
T 1czf_A 28 DSCTFTT-----------AAAAKAGKAK-CSTITLNNIEVPAGT-TLD--LTGL----TSGTKVIFEGTTTFQ--YEEWA 86 (362)
T ss_dssp CEEEESS-----------HHHHHHHGGG-CSEEEEESCEECTTC-CEE--ECSC----CTTCEEEEESEEEEC--CCCSC
T ss_pred CEEEECC-----------HHHHHHHHHH-hhccCCCEEEECCCE-EEE--eecc----CCCeEEEEeCcEEec--cccCC
Confidence 5799987 6799999985 663 57899999997 552 2 23 357899999998864 35675
Q ss_pred ccCcceEEEEEeccCeEEec--ceEEECcCCccccCCCCC--CC------------------------------cccEEE
Q 042447 117 PKLARIWLDFSKLNGVLFQG--SGVIDGSGSKWWASSCKK--NK------------------------------SESVRV 162 (355)
Q Consensus 117 ~~~~~~~i~~~~~~ni~I~G--~G~IdG~G~~~~~~~~~~--~~------------------------------~~nv~i 162 (355)
. .|+.+.. +||+|+| .|+|||+|+.||...... .+ ++||+|
T Consensus 87 g----~~i~~~~-~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~~~nv~i 161 (362)
T 1czf_A 87 G----PLISMSG-EHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQANDITF 161 (362)
T ss_dssp C----CSEEEEE-ESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEECSSEEE
T ss_pred C----cEEEEeC-ccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCccEEEEeeCCEEE
Confidence 3 5777754 9999999 799999999999753211 01 256777
Q ss_pred EEEEEeCCCC----CCCCceeeecCcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcCCceEEeccCCcccccceEE
Q 042447 163 YQVLVSAPED----SPNTDGIHITESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGPGHGISIGSLGKDNSMGIVT 238 (355)
Q Consensus 163 ~~v~I~~~~~----~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~ 238 (355)
++++|+++.. .+|+||||+.+|+||+|+||+|.++||||++|++ +||+|+||+|+++|||+|||+|++ +.+.|+
T Consensus 162 ~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~ 239 (362)
T 1czf_A 162 TDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSG-ENIWFTGGTCIGGHGLSIGSVGDR-SNNVVK 239 (362)
T ss_dssp ESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSCCEEEEEECSS-SCCEEE
T ss_pred EEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeCC-eEEEEEEEEEeCCceeEEeecccc-CCCCEE
Confidence 7777777532 7899999999999999999999999999999986 999999999999999999999876 567899
Q ss_pred EEEEecceecCCceeEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEEc---C------C--CCceeCEEEEeEEEEeC
Q 042447 239 KVVLDTAYLRETANGLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFAC---S------D--TVPCSDIVLSNVNLEKK 307 (355)
Q Consensus 239 nV~i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~~---~------~--~~~~~nI~~~nV~i~~~ 307 (355)
||+|+||++.++.+|+|||+|++..+.++||+|+||++......++.|.. . + ..+++||+|+||+.+..
T Consensus 240 nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~~~~~i~nI~~~ni~gt~~ 319 (362)
T 1czf_A 240 NVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPTNGVTIQDVKLESVTGSVD 319 (362)
T ss_dssp EEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCCSSEEEEEEEEEEEEEEEC
T ss_pred EEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCCCCceEEEEEEEEEEEEec
Confidence 99999999999999999999988778899999999988775445666531 1 1 24678888888888776
Q ss_pred CCc--c-----eeeeeeeEEeeceec
Q 042447 308 DGT--V-----ETYCNSAQGIGYGIV 326 (355)
Q Consensus 308 ~g~--~-----~~~c~n~~g~~~~~~ 326 (355)
.+. . ...|.|++.....++
T Consensus 320 ~~~~~i~i~c~~~~c~ni~~~nv~i~ 345 (362)
T 1czf_A 320 SGATEIYLLCGSGSCSDWTWDDVKVT 345 (362)
T ss_dssp TTSEEEEEECCTTTEEEEEEEEEEEE
T ss_pred CCceEEEEEeCCCcCcCEEEEeEEEE
Confidence 521 1 235788877777654
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=2.5e-42 Score=333.11 Aligned_cols=256 Identities=25% Similarity=0.444 Sum_probs=204.7
Q ss_pred chHHHHHHHHHHhhcC-CCcEEEEcCCeEEEEeee-eeeccccccEEEEEceEEeecCCCCCCCccCcceEEEEEeccCe
Q 042447 55 DDTQAFLNAWNTACST-PKSVFLVPAGRHYLVSAT-RFKGPCADKLVIQIDGTIVAPAEPDNWDPKLARIWLDFSKLNGV 132 (355)
Q Consensus 55 DdT~Aiq~Ai~~a~~~-gg~~V~iP~G~tY~i~~~-~l~~p~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~~ni 132 (355)
.||+|||+||++ |+. ++++|+||+|+ |+. + .| .++++|+++|.+.+. ...|.. .|+.+.+ ++|
T Consensus 6 ~dt~aiq~ai~~-c~~~~g~~v~vP~G~-~~~--l~~l----~~~~~l~~~g~~~~~--~~~w~g----~~i~~~~-~nv 70 (339)
T 2iq7_A 6 TDAAAAIKGKAS-CTSIILNGIVVPAGT-TLD--MTGL----KSGTTVTFQGKTTFG--YKEWEG----PLISFSG-TNI 70 (339)
T ss_dssp SCHHHHHHHGGG-CSEEEEESCEECTTC-CEE--ECSC----CTTCEEEEESEEEEC--CCCSCC----CSEEEEE-ESC
T ss_pred CCHHHHHHHHHH-hhccCCCeEEECCCE-EEE--eecc----CCCeEEEEeCcEEcc--cccccC----cEEEEEc-ccE
Confidence 479999999995 654 57899999997 653 2 23 367899999988764 356653 5677766 999
Q ss_pred EEecc--eEEECcCCccccCCCC-----CC-----------------------------CcccEEEEEEEEeCCCC----
Q 042447 133 LFQGS--GVIDGSGSKWWASSCK-----KN-----------------------------KSESVRVYQVLVSAPED---- 172 (355)
Q Consensus 133 ~I~G~--G~IdG~G~~~~~~~~~-----~~-----------------------------~~~nv~i~~v~I~~~~~---- 172 (355)
+|+|. |+|||+|+.||..... +. .++||+|++++|+++..
T Consensus 71 ~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~ 150 (339)
T 2iq7_A 71 NINGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAG 150 (339)
T ss_dssp EEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTT
T ss_pred EEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCcccccc
Confidence 99996 7999999999974321 00 12677777777777643
Q ss_pred CCCCceeeecCcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcCCceEEeccCCcccccceEEEEEEecceecCCce
Q 042447 173 SPNTDGIHITESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGPGHGISIGSLGKDNSMGIVTKVVLDTAYLRETAN 252 (355)
Q Consensus 173 ~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~ 252 (355)
.+|+|||++.+|+||+|+||+|.++||||++|++ +||+|+||+|+++|||+|||+|++ ..+.++||+|+||++.++.+
T Consensus 151 ~~ntDGid~~~s~nV~I~n~~i~~gDDciaiksg-~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~~~~~ 228 (339)
T 2iq7_A 151 GHNTDAFDVGSSTGVYISGANVKNQDDCLAINSG-TNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIVNSDN 228 (339)
T ss_dssp CCSCCSEEEESCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEESCSE
T ss_pred CCCCCcEEEcCcceEEEEecEEecCCCEEEEcCC-ccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCc
Confidence 7899999999999999999999999999999986 999999999999999999999876 56789999999999999999
Q ss_pred eEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEEc---C------C--CCceeCEEEEeEEEEeCCCc--c-----eee
Q 042447 253 GLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFAC---S------D--TVPCSDIVLSNVNLEKKDGT--V-----ETY 314 (355)
Q Consensus 253 gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~~---~------~--~~~~~nI~~~nV~i~~~~g~--~-----~~~ 314 (355)
|++||+|++..+.++||+|+||++......++.|.. . + ..+++||+|+||+.+...+. . ...
T Consensus 229 girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~c~~~~ 308 (339)
T 2iq7_A 229 GVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTPTNGVPITGLTLSKITGSVASSGTNVYILCASGA 308 (339)
T ss_dssp EEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCSSSCEEEEEEEEEEEEECTTSEEEEEECCTTC
T ss_pred EEEEEEeCCCCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEeCCCc
Confidence 999999988778999999999999876444666641 1 1 25789999999998887621 1 235
Q ss_pred eeeeEEeeceecc
Q 042447 315 CNSAQGIGYGIVH 327 (355)
Q Consensus 315 c~n~~g~~~~~~~ 327 (355)
|.|++.....+..
T Consensus 309 c~ni~~~nv~i~~ 321 (339)
T 2iq7_A 309 CSNWKWSGVSVTG 321 (339)
T ss_dssp EEEEEEEEEEEES
T ss_pred EecEEEEeEEEEc
Confidence 8888887777653
No 7
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=5.5e-42 Score=331.73 Aligned_cols=255 Identities=24% Similarity=0.408 Sum_probs=191.5
Q ss_pred hHHHHHHHHHHhhcC-CCcEEEEcCCeEEEEeee-eeeccccccEEEEEceEEeecCCCCCCCccCcceEEEEEeccCeE
Q 042447 56 DTQAFLNAWNTACST-PKSVFLVPAGRHYLVSAT-RFKGPCADKLVIQIDGTIVAPAEPDNWDPKLARIWLDFSKLNGVL 133 (355)
Q Consensus 56 dT~Aiq~Ai~~a~~~-gg~~V~iP~G~tY~i~~~-~l~~p~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~~ni~ 133 (355)
||+|||+|+++ |+. ++++|+||+|+ |+. + .| .++++|+++|.+.+.. ..|.. ..|+.+.. ++|+
T Consensus 7 ~t~aiq~ai~~-c~~~gg~~v~vP~G~-~l~--l~~l----~~~~~l~~~g~~~~~~--~~w~~---g~~i~~~~-~ni~ 72 (349)
T 1hg8_A 7 EYSGLATAVSS-CKNIVLNGFQVPTGK-QLD--LSSL----QNDSTVTFKGTTTFAT--TADND---FNPIVISG-SNIT 72 (349)
T ss_dssp SGGGHHHHHHH-CSEEEECCCEECTTC-CEE--ETTC----CTTCEEEECSEEEECC--CCCTT---CCSEEEEE-ESCE
T ss_pred CHHHHHHHHHh-ccccCCCEEEECCCE-EEE--eecc----CCCeEEEEcCceeccc--ccccC---CceEEEEC-ccEE
Confidence 68999999996 664 57899999997 653 2 22 3578999999987642 56721 35777765 9999
Q ss_pred Eec--ceEEECcCCccccCCCCC-------------C-C-----------------------cccEEEEEEEEeCCC-C-
Q 042447 134 FQG--SGVIDGSGSKWWASSCKK-------------N-K-----------------------SESVRVYQVLVSAPE-D- 172 (355)
Q Consensus 134 I~G--~G~IdG~G~~~~~~~~~~-------------~-~-----------------------~~nv~i~~v~I~~~~-~- 172 (355)
|+| .|+|||+|+.||...... . . ++||+|++++|+++. +
T Consensus 73 I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~ 152 (349)
T 1hg8_A 73 ITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDK 152 (349)
T ss_dssp EEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSS
T ss_pred EEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCcc
Confidence 999 699999999999742110 0 1 167777888887752 2
Q ss_pred ----------CCCCceeeecCcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcCCceEEeccCCcccccceEEEEEE
Q 042447 173 ----------SPNTDGIHITESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGPGHGISIGSLGKDNSMGIVTKVVL 242 (355)
Q Consensus 173 ----------~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~nV~i 242 (355)
.+|+|||++.+|+||+|+||+|.++||||++|++ +||+|+||+|+++|||+|||+|++ ..+.++||+|
T Consensus 153 ~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v 230 (349)
T 1hg8_A 153 PNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSG-TNIVVSNMYCSGGHGLSIGSVGGK-SDNVVDGVQF 230 (349)
T ss_dssp CCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESSE-EEEEEEEEEEESSCCEEEEEESSS-SCCEEEEEEE
T ss_pred ccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeCC-eEEEEEeEEEeCCcceEEcccccc-ccCCEEEEEE
Confidence 5899999999999999999999999999999985 999999999999999999999877 5678999999
Q ss_pred ecceecCCceeEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEEc---C------C--CCceeCEEEEeEEEEeCCCc-
Q 042447 243 DTAYLRETANGLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFAC---S------D--TVPCSDIVLSNVNLEKKDGT- 310 (355)
Q Consensus 243 ~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~~---~------~--~~~~~nI~~~nV~i~~~~g~- 310 (355)
+||++.++.+|+|||+|++..+.++||+|+||++......++.|.. . + ..+++||+|+||+.+...+.
T Consensus 231 ~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~ 310 (349)
T 1hg8_A 231 LSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNGGPTGKPTNGVKISNIKFIKVTGTVASSAQ 310 (349)
T ss_dssp EEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSSBCSCCCSSEEEEEEEEEEEEEEECTTSE
T ss_pred EEEEEECCCcEEEEEecCCCCccccceEEEEEEEEccccccEEEEeeccCCCCCCcccCCceEEEEEEEeEEEEeCCCCE
Confidence 9999999999999999986666777777777776654334544421 1 1 12456666666666654421
Q ss_pred -c-----eeeeeeeEEeeceec
Q 042447 311 -V-----ETYCNSAQGIGYGIV 326 (355)
Q Consensus 311 -~-----~~~c~n~~g~~~~~~ 326 (355)
. ...|.|++.....++
T Consensus 311 ~v~i~c~~~~c~ni~~~nv~i~ 332 (349)
T 1hg8_A 311 DWFILCGDGSCSGFTFSGNAIT 332 (349)
T ss_dssp EEEEECCSSCEEEEEEESCEEE
T ss_pred EEEEEeCCCcCcCEEEEeEEEE
Confidence 0 233666666555543
No 8
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=3.9e-42 Score=331.41 Aligned_cols=256 Identities=28% Similarity=0.455 Sum_probs=202.8
Q ss_pred chHHHHHHHHHHhhc-CCCcEEEEcCCeEEEEeee-eeeccccccEEEEEceEEeecCCCCCCCccCcceEEEEEeccCe
Q 042447 55 DDTQAFLNAWNTACS-TPKSVFLVPAGRHYLVSAT-RFKGPCADKLVIQIDGTIVAPAEPDNWDPKLARIWLDFSKLNGV 132 (355)
Q Consensus 55 DdT~Aiq~Ai~~a~~-~gg~~V~iP~G~tY~i~~~-~l~~p~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~~ni 132 (355)
.||+|||+||++ |+ .++++|+||+|+ |+. + .| +.+++|+++|.+.+. ...|.. .|+.+.. ++|
T Consensus 6 ~~t~aiq~ai~~-c~~~gg~~v~vP~G~-~~~--l~~l----~~~~~l~~~g~~~~~--~~~w~g----~li~~~~-~nv 70 (336)
T 1nhc_A 6 TSASEASESISS-CSDVVLSSIEVPAGE-TLD--LSDA----ADGSTITFEGTTSFG--YKEWKG----PLIRFGG-KDL 70 (336)
T ss_dssp SSHHHHHHHGGG-CSEEEEESCEECTTC-CEE--CTTC----CTTCEEEEESEEEEC--CCCSCC----CSEECCE-ESC
T ss_pred CCHHHHHHHHHH-hhccCCCeEEECCCE-EEE--eecc----CCCeEEEEeceEEcc--cccccC----cEEEEec-CCE
Confidence 579999999995 65 456899999997 652 2 23 367899999988864 355653 4666654 999
Q ss_pred EEecc--eEEECcCCccccCCCCC---CC------------------------------cccEEEEEEEEeCCCC----C
Q 042447 133 LFQGS--GVIDGSGSKWWASSCKK---NK------------------------------SESVRVYQVLVSAPED----S 173 (355)
Q Consensus 133 ~I~G~--G~IdG~G~~~~~~~~~~---~~------------------------------~~nv~i~~v~I~~~~~----~ 173 (355)
+|+|. |+|||+|+.||...... .+ ++||+|++++|+++.. .
T Consensus 71 ~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~nv~i~~~~I~~~~~d~~~~ 150 (336)
T 1nhc_A 71 TVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQATNVHLNDFTIDNSDGDDNGG 150 (336)
T ss_dssp EEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEEEEEEEEESCEEECTTHHHHTC
T ss_pred EEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEEeCCEEEEEEEEECCCcccccC
Confidence 99996 79999999999743211 01 2566777777777643 7
Q ss_pred CCCceeeecCcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcCCceEEeccCCcccccceEEEEEEecceecCCcee
Q 042447 174 PNTDGIHITESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGPGHGISIGSLGKDNSMGIVTKVVLDTAYLRETANG 253 (355)
Q Consensus 174 ~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~g 253 (355)
+|+||||+.+|+||+|+||+|.++||||+||++ +||+|+||+|+++|||+|||+|++ ..+.++||+|+||++.++.+|
T Consensus 151 ~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg-~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~g 228 (336)
T 1nhc_A 151 HNTDGFDISESTGVYISGATVKNQDDCIAINSG-ESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVSNSANG 228 (336)
T ss_dssp CSCCSEEECSCEEEEEESCEEESSSEEEEESSE-EEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEESCSEE
T ss_pred CCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCC-eEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEECCCcE
Confidence 899999999999999999999999999999986 999999999999999999999876 567899999999999999999
Q ss_pred EEEEEeccCCeEEeeEEEEeEEEeecCcccEEEE---cC------C--CCceeCEEEEeEEEEeCC-Cc------ceeee
Q 042447 254 LRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFA---CS------D--TVPCSDIVLSNVNLEKKD-GT------VETYC 315 (355)
Q Consensus 254 i~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~---~~------~--~~~~~nI~~~nV~i~~~~-g~------~~~~c 315 (355)
++||+|.+..+.++||+|+||++......++.|. +. + ..+++||+|+||+.+... +. ....|
T Consensus 229 irIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~~~~c 308 (336)
T 1nhc_A 229 VRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTPSTGIPITDVTVDGVTGTLEDDATQVYILCGDGSC 308 (336)
T ss_dssp EEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCSSSCEEEEEEEEEEEEECTTCEEEEEECCTTCE
T ss_pred EEEEEECCCCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEcCCCcE
Confidence 9999998877889999999999887644466653 11 1 246888999999888766 21 13347
Q ss_pred eeeEEeeceecc
Q 042447 316 NSAQGIGYGIVH 327 (355)
Q Consensus 316 ~n~~g~~~~~~~ 327 (355)
.|++.....+..
T Consensus 309 ~ni~~~nv~i~~ 320 (336)
T 1nhc_A 309 SDWTWSGVDLSG 320 (336)
T ss_dssp EEEEEEEEEEES
T ss_pred ecEEEEeEEEEc
Confidence 888877777643
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=8.1e-42 Score=329.44 Aligned_cols=254 Identities=25% Similarity=0.413 Sum_probs=201.0
Q ss_pred hHHHHHHHHHHhhcC-CCcEEEEcCCeEEEEeee-eeeccccccEEEEEceEEeecCCCCCCCccCcceEEEEEeccCeE
Q 042447 56 DTQAFLNAWNTACST-PKSVFLVPAGRHYLVSAT-RFKGPCADKLVIQIDGTIVAPAEPDNWDPKLARIWLDFSKLNGVL 133 (355)
Q Consensus 56 dT~Aiq~Ai~~a~~~-gg~~V~iP~G~tY~i~~~-~l~~p~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~~ni~ 133 (355)
-++|||+||++ |+. ++++|+||+|+ |+. + .| +++++|+++|.+.+. ...|.. .|+.+.. ++|+
T Consensus 11 g~~aiq~ai~~-c~~~gg~~v~vP~G~-~l~--l~~l----~~~~~l~~~g~~~~~--~~~w~g----~li~~~~-~nv~ 75 (339)
T 1ia5_A 11 GASSASKSKTS-CSTIVLSNVAVPSGT-TLD--LTKL----NDGTHVIFSGETTFG--YKEWSG----PLISVSG-SDLT 75 (339)
T ss_dssp HHHHHHHHGGG-CSEEEEESCEECTTC-CEE--ECSC----CTTCEEEEESEEEEC--CCCSCC----CSEEEEE-ESCE
T ss_pred chHHHHHHHHH-hhccCCCeEEECCCE-EEE--eecc----CCCeEEEEeCcEEcc--cccccC----cEEEEEc-CcEE
Confidence 36799999996 654 57899999997 652 2 23 367899999988864 356653 5677766 9999
Q ss_pred Eecc--eEEECcCCccccCCCCC---CC-------------------------------cccEEEEEEEEeCCCC----C
Q 042447 134 FQGS--GVIDGSGSKWWASSCKK---NK-------------------------------SESVRVYQVLVSAPED----S 173 (355)
Q Consensus 134 I~G~--G~IdG~G~~~~~~~~~~---~~-------------------------------~~nv~i~~v~I~~~~~----~ 173 (355)
|+|. |+|||+|+.||...... .+ ++||+|++++|+++.. .
T Consensus 76 I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~ 155 (339)
T 1ia5_A 76 ITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGG 155 (339)
T ss_dssp EEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTC
T ss_pred EEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccC
Confidence 9996 79999999999753211 01 2677777777777632 6
Q ss_pred CCCceeeecCcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcCCceEEeccCCcccccceEEEEEEecceecCCcee
Q 042447 174 PNTDGIHITESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGPGHGISIGSLGKDNSMGIVTKVVLDTAYLRETANG 253 (355)
Q Consensus 174 ~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~g 253 (355)
+|+|||++.+|+||+|+||+|.++||||++|++ +||+|+||+|+++|||+|||+|++ ..+.++||+|+||++.++.+|
T Consensus 156 ~ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~g 233 (339)
T 1ia5_A 156 HNTDAFDIGTSTYVTISGATVYNQDDCVAVNSG-ENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVDSTIINSDNG 233 (339)
T ss_dssp CSCCSEEEESCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEEEEEESCSEE
T ss_pred CCCCcEEecCCceEEEEeeEEEcCCCeEEEeCC-eEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcE
Confidence 899999999999999999999999999999986 999999999999999999999876 567899999999999999999
Q ss_pred EEEEEeccCCeEEeeEEEEeEEEeecCcccEEEEc-------CC--CCceeCEEEEeEEEEeCCCc-------ceeeeee
Q 042447 254 LRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFAC-------SD--TVPCSDIVLSNVNLEKKDGT-------VETYCNS 317 (355)
Q Consensus 254 i~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~~-------~~--~~~~~nI~~~nV~i~~~~g~-------~~~~c~n 317 (355)
++||+|++..+.++||+|+||++......++.|.. .+ ..+++||+|+||+.+...+. ....|.|
T Consensus 234 irIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~~~~i~ni~~~ni~gt~~~~~~~v~i~c~~~~c~n 313 (339)
T 1ia5_A 234 VRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTTGVPITDFVLDNVHGSVVSSGTNILISCGSGSCSD 313 (339)
T ss_dssp EEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCSSSCEEEEEEEEEEEEECTTSEEEEEECCTTCEEE
T ss_pred EEEEEeCCCCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcCCceEEEEEEEeEEEEeCCCCEEEEEEeCCCCEec
Confidence 99999987778899999999988865444666642 11 24688888888888876521 1234778
Q ss_pred eEEeeceec
Q 042447 318 AQGIGYGIV 326 (355)
Q Consensus 318 ~~g~~~~~~ 326 (355)
++.....++
T Consensus 314 i~~~nv~i~ 322 (339)
T 1ia5_A 314 WTWTDVSVS 322 (339)
T ss_dssp EEEEEEEEE
T ss_pred EEEEeEEEE
Confidence 887777654
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=6.7e-41 Score=322.20 Aligned_cols=250 Identities=23% Similarity=0.388 Sum_probs=203.5
Q ss_pred HHHHHHHHHHhhcC-CCcEEEEcCCeEEEEeeeeeeccccccEEEEEceEEeecCCCCCCCccCcceEEEEEeccCeEEe
Q 042447 57 TQAFLNAWNTACST-PKSVFLVPAGRHYLVSATRFKGPCADKLVIQIDGTIVAPAEPDNWDPKLARIWLDFSKLNGVLFQ 135 (355)
Q Consensus 57 T~Aiq~Ai~~a~~~-gg~~V~iP~G~tY~i~~~~l~~p~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~~ni~I~ 135 (355)
++|||+ ++ +|+. ++++|+||+|+ |+ .+.| +++++|+++|.+.+.. ..|.. .|+.+. .+||+|+
T Consensus 8 ~~aiq~-i~-aC~~~gg~~v~vP~G~-~l--~l~l----~~~~~l~~~g~~~~~~--~~w~~----~~i~~~-~~ni~I~ 71 (335)
T 1k5c_A 8 VDDAKD-IA-GCSAVTLNGFTVPAGN-TL--VLNP----DKGATVTMAGDITFAK--TTLDG----PLFTID-GTGINFV 71 (335)
T ss_dssp TTGGGG-CT-TCSEEEECCEEECTTC-CE--EECC----CTTCEEEECSCEEECC--CCSCS----CSEEEE-EEEEEEE
T ss_pred HHHhHH-HH-hcccCCCCEEEECCCE-EE--EEEe----CCCeEEEEeccEeccc--ccccC----cEEEEE-ccCEEEE
Confidence 679999 87 4764 57899999997 65 2333 4689999999988743 56753 577776 4999999
Q ss_pred c-ceEEECcCCccccCCCCC---CC------------------------------ccc-EEEEEEEEeCCCC-----CCC
Q 042447 136 G-SGVIDGSGSKWWASSCKK---NK------------------------------SES-VRVYQVLVSAPED-----SPN 175 (355)
Q Consensus 136 G-~G~IdG~G~~~~~~~~~~---~~------------------------------~~n-v~i~~v~I~~~~~-----~~n 175 (355)
| .|+|||+|+.||...... .+ ++| |+|++++|+++.. .+|
T Consensus 72 G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~N 151 (335)
T 1k5c_A 72 GADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGSGTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGHN 151 (335)
T ss_dssp CTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEEEEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCCS
T ss_pred eCccEEcCChhHhhhcccccCCCCCCeEEEEeceEEEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCCC
Confidence 9 699999999999754221 11 167 9999999998743 799
Q ss_pred CceeeecCcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcCCceEEeccCCcccccceEEEEEEecceecCCceeEE
Q 042447 176 TDGIHITESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGPGHGISIGSLGKDNSMGIVTKVVLDTAYLRETANGLR 255 (355)
Q Consensus 176 ~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~gi~ 255 (355)
+||||+ +|+||+|+||+|.++||||+||++ +||+|+||+|+++|||+|||+|+ .+.|+||+|+||++.++.+|+|
T Consensus 152 tDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t~~gir 226 (335)
T 1k5c_A 152 TDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRSMYGVR 226 (335)
T ss_dssp CCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEEEEEEE
T ss_pred CCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECCCceEE
Confidence 999999 999999999999999999999997 99999999999999999999964 4689999999999999999999
Q ss_pred EEEeccCC-eEEeeEEEEeEEEeecCcccEEEEc-------CC--CCceeCEEEEeEEEE--eCC-C-c-----ceeeee
Q 042447 256 IKTWQTSA-VKISQIMYRNISGTTKSSKAMKFAC-------SD--TVPCSDIVLSNVNLE--KKD-G-T-----VETYCN 316 (355)
Q Consensus 256 Ik~~~~~~-~~i~nItf~NI~g~~~~~~~i~i~~-------~~--~~~~~nI~~~nV~i~--~~~-g-~-----~~~~c~ 316 (355)
||+|++.. +.++||+|+||++......++.|.. .+ ..+++||+|+||++. ... . . .. .|.
T Consensus 227 IKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~~-~c~ 305 (335)
T 1k5c_A 227 IKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECGN-CSG 305 (335)
T ss_dssp EEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCCSSSCEEEEEECSSCEEEEECTTCEEEEEECSS-EES
T ss_pred EEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCCCCceEEEEEEEEEEEeeEEcCCceEEEEECCC-cCC
Confidence 99999887 8999999999999886446777752 11 357899999999844 333 1 1 12 689
Q ss_pred eeEEeeceeccC
Q 042447 317 SAQGIGYGIVHP 328 (355)
Q Consensus 317 n~~g~~~~~~~p 328 (355)
|++.....+..+
T Consensus 306 ni~~~nv~i~~~ 317 (335)
T 1k5c_A 306 NWNWSQLTVTGG 317 (335)
T ss_dssp EEEEEEEEEESS
T ss_pred CEEEEeEEEEcC
Confidence 999888887543
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=7.5e-38 Score=314.79 Aligned_cols=250 Identities=14% Similarity=0.095 Sum_probs=200.1
Q ss_pred eEEEeeecCCCCCCCcchHHHHHHHHHHhhcCCCcEEEEcCCeEEEE------------eeeeeeccccccEEEEEceEE
Q 042447 39 VLVNVDSFGAAGDGVSDDTQAFLNAWNTACSTPKSVFLVPAGRHYLV------------SATRFKGPCADKLVIQIDGTI 106 (355)
Q Consensus 39 ~~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~gg~~V~iP~G~tY~i------------~~~~l~~p~~~~~~l~~~g~l 106 (355)
.++||+||||+|| ||+|||+||+++++.++++|+||+|.+|++ +++.|+ ++++|+++|+|
T Consensus 50 ~~~nV~dfGA~gD----dT~AIqkAIdaCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~Lk----SnVtL~LdGtL 121 (600)
T 2x6w_A 50 PSGNVIQPGPNVD----SRQYLQAAIDYVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLR----SNVNLNIEGRI 121 (600)
T ss_dssp TTSCBCCCCTTCC----CHHHHHHHHHHHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEECC----TTEEEEECSEE
T ss_pred cEEeeecCCCCcc----CHHHHHHHHHHhhhcCCCEEEECCCCEEEecccccccccccccceEEc----CceEEeeecEE
Confidence 4789999999998 899999999964446789999999944999 777775 68999999999
Q ss_pred eecCCCCCCCcc--CcceE---EEEEeccCeEEecceEEECcCCccccCCC-----------------------------
Q 042447 107 VAPAEPDNWDPK--LARIW---LDFSKLNGVLFQGSGVIDGSGSKWWASSC----------------------------- 152 (355)
Q Consensus 107 ~~~~~~~~~~~~--~~~~~---i~~~~~~ni~I~G~G~IdG~G~~~~~~~~----------------------------- 152 (355)
++++++.+|+.. ....| |++.+++||+|+|.|+|||+|+.||....
T Consensus 122 ~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~~~~~RP~l~f~~c~I~GITi~NSDP~w~I 201 (600)
T 2x6w_A 122 HLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQLRNGVAFGRSYNCSVTGITFQNGDVTWAI 201 (600)
T ss_dssp EECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTCCEEEEECCSEEEEEEESCEEESCCCSCSE
T ss_pred EEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccccCCCCCEEEEeeeEEeCeEEECCCCccEE
Confidence 999999999642 11233 77888999999999999999999995210
Q ss_pred CC---CCcccEEEEEEE----EeCCCCCCCCceeeecCcccEEEEeeEEecCCceEEe-ecCCc-cEEEEeeEEcCCc-e
Q 042447 153 KK---NKSESVRVYQVL----VSAPEDSPNTDGIHITESTNVVLQDCKIGTGDDCISI-VNGSS-AIKMKRIFCGPGH-G 222 (355)
Q Consensus 153 ~~---~~~~nv~i~~v~----I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~i-k~g~~-ni~i~n~~~~~~~-G 222 (355)
.. ..++||+|++++ |++ ++|+||| |+|+||+|.++||||+| |+++. ++.++ +|.++| |
T Consensus 202 ~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni~~e--~~~~GHgG 269 (600)
T 2x6w_A 202 TLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNIACS--VQLHQHDT 269 (600)
T ss_dssp EECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHHEEE--EEECSSSE
T ss_pred EeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCeEEE--EEcCCCCc
Confidence 01 345788888888 666 7899999 99999999999999999 99974 46777 677777 9
Q ss_pred EEeccCCc---------------ccccceEEEEEEecceecCCceeEEEEEec--cCCeEEeeEEEEeEEEeecCcc---
Q 042447 223 ISIGSLGK---------------DNSMGIVTKVVLDTAYLRETANGLRIKTWQ--TSAVKISQIMYRNISGTTKSSK--- 282 (355)
Q Consensus 223 i~iGS~g~---------------~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~--~~~~~i~nItf~NI~g~~~~~~--- 282 (355)
|+|||+.. ....+.++||+|+|+++++...++.+...+ ...+.|+||+|+||+++.....
T Consensus 270 ISIGSe~~ggV~NV~V~NrIKt~~G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItgTsas~aav~ 349 (600)
T 2x6w_A 270 FYRGSTVNGYCRGAYVVMHAAEAAGAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIVSIGERAAFS 349 (600)
T ss_dssp EEESCEEEEESEEEEEEECGGGCTTTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEEEECSCCTTS
T ss_pred EEecccccCcEEEEEEEEEEEeecCCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEEEeccccccc
Confidence 99999522 113478999999999999998888887542 4567999999999999875433
Q ss_pred ---cEEEEcCCC-------CceeCEEEEeEEEEeCC
Q 042447 283 ---AMKFACSDT-------VPCSDIVLSNVNLEKKD 308 (355)
Q Consensus 283 ---~i~i~~~~~-------~~~~nI~~~nV~i~~~~ 308 (355)
+..+.+.++ .++++|+|+|+.+..++
T Consensus 350 ~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~~ 385 (600)
T 2x6w_A 350 APFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAPA 385 (600)
T ss_dssp SSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECCT
T ss_pred cccceEEEecCcccccccccceeEEEEeceEEEcCC
Confidence 256655443 58999999999996543
No 12
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=5e-34 Score=288.33 Aligned_cols=249 Identities=20% Similarity=0.241 Sum_probs=186.5
Q ss_pred eEEEeeecCCCCCCCcchHHHHHHHHHHhhcCCCcEEEEcCCeEEEE-eeeeeeccccccEEEEEce----EEeecCCCC
Q 042447 39 VLVNVDSFGAAGDGVSDDTQAFLNAWNTACSTPKSVFLVPAGRHYLV-SATRFKGPCADKLVIQIDG----TIVAPAEPD 113 (355)
Q Consensus 39 ~~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~gg~~V~iP~G~tY~i-~~~~l~~p~~~~~~l~~~g----~l~~~~~~~ 113 (355)
.++||+||||+|||++|||+|||+||++ |++|+||+|+ |++ +++.|+ ++++|.+++ +|.++.+..
T Consensus 21 ~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-----Gg~V~iP~Gt-Ylis~~l~l~----snv~L~g~g~~~t~L~~~~~~p 90 (609)
T 3gq8_A 21 FGVSVKTYGAKGDGVTDDIRAFEKAIES-----GFPVYVPYGT-FMVSRGIKLP----SNTVLTGAGKRNAVIRFMDSVG 90 (609)
T ss_dssp SSEEGGGGTCCCEEEEECHHHHHHHHHT-----SSCEEECSEE-EEESSCEEEC----SSEEEEESCTTTEEEEECTTCC
T ss_pred cEEEeEecccCCCCCchhHHHHHHHHHc-----CCEEEECCcc-EEEeCceEEC----CCcEEEEeeCCCCEEEeCCCCC
Confidence 4799999999999999999999999985 3899999995 999 888876 466777664 677765543
Q ss_pred CCCccCcceEEEEEeccCeEEecceEEECcCCccccCC---CC-C------CCcccEEEEEEEEeCCCC--------CCC
Q 042447 114 NWDPKLARIWLDFSKLNGVLFQGSGVIDGSGSKWWASS---CK-K------NKSESVRVYQVLVSAPED--------SPN 175 (355)
Q Consensus 114 ~~~~~~~~~~i~~~~~~ni~I~G~G~IdG~G~~~~~~~---~~-~------~~~~nv~i~~v~I~~~~~--------~~n 175 (355)
.|.. ....|+++.+.+||+|+|. +|||+|+.||... +. + ..++|+.|+++++.+.+. ..|
T Consensus 91 ~~~~-li~~lI~a~~~~NItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~N 168 (609)
T 3gq8_A 91 RGES-LMYNENVTTGNENIFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLD 168 (609)
T ss_dssp SSCC-SEEESCTTTCCEEEEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSS
T ss_pred CCCc-eeeeeeeecccccEEEEee-EEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCC
Confidence 3321 1223456678899999996 9999998554321 10 0 134899999999976532 113
Q ss_pred CceeeecC------cccEEEEeeEE-ecCCceEEeecCCccEEEEeeEEcC------CceEEeccCCcccccceEEEEEE
Q 042447 176 TDGIHITE------STNVVLQDCKI-GTGDDCISIVNGSSAIKMKRIFCGP------GHGISIGSLGKDNSMGIVTKVVL 242 (355)
Q Consensus 176 ~DGi~~~~------s~nv~I~n~~i-~~gDD~I~ik~g~~ni~i~n~~~~~------~~Gi~iGS~g~~~~~~~v~nV~i 242 (355)
||+++.+ |+||+|+||+| .++||||++++ ++||+|+||+|.. ++||+||+. .+||+|
T Consensus 169 -DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp~G~S~~~GIsIGsg--------s~NVtV 238 (609)
T 3gq8_A 169 -YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGFEIDDG--------SRHVVL 238 (609)
T ss_dssp -CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSCSSCCSEEECTT--------CEEEEE
T ss_pred -ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECCCCCCCcccEEccCC--------cccEEE
Confidence 7888887 99999999999 56999999965 8999999999932 479999853 289999
Q ss_pred ecceecCCceeEEEEEeccCCeEEeeEEEEeE-EEeecCcccEEEEcC------CCCceeCEEEEeEEEEeCCCc
Q 042447 243 DTAYLRETANGLRIKTWQTSAVKISQIMYRNI-SGTTKSSKAMKFACS------DTVPCSDIVLSNVNLEKKDGT 310 (355)
Q Consensus 243 ~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI-~g~~~~~~~i~i~~~------~~~~~~nI~~~nV~i~~~~g~ 310 (355)
+||++.++.+|++||++.. ...++||.|.|. ...+.....+...+. ...+..||++.|+....+...
T Consensus 239 ~Nc~i~nt~~GIrIKt~~~-~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~ 312 (609)
T 3gq8_A 239 SNNRSKGCYGGIEIKAHGD-APAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNK 312 (609)
T ss_dssp ESEEEESSSEEEEEEECTT-SCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCT
T ss_pred EeeEEECCCCEEEEEecCC-CCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeeccc
Confidence 9999999999999999753 457888888774 332221222333222 334678999999998886544
No 13
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=4.5e-33 Score=277.07 Aligned_cols=232 Identities=18% Similarity=0.241 Sum_probs=182.6
Q ss_pred ceEEE-eeecCCCCCCCcchHHHHHHHHHHhhcC-CCcEEEEcCCeEEEEeeeeeeccccccEEEEEc--eEEeecCC--
Q 042447 38 KVLVN-VDSFGAAGDGVSDDTQAFLNAWNTACST-PKSVFLVPAGRHYLVSATRFKGPCADKLVIQID--GTIVAPAE-- 111 (355)
Q Consensus 38 ~~~~n-V~dyGA~gDG~tDdT~Aiq~Ai~~a~~~-gg~~V~iP~G~tY~i~~~~l~~p~~~~~~l~~~--g~l~~~~~-- 111 (355)
...++ |++|||+|||++|||+|||+||+++++. ++++|+||+|+ |+++++.|+ ++++|+++ ++|+++.+
T Consensus 19 ~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~~~~ggg~V~vP~Gt-Yl~g~I~lk----s~v~L~l~~GatL~~s~~td 93 (464)
T 1h80_A 19 DVNYDLVDDFGANGNDTSDDSNALQRAINAISRKPNGGTLLIPNGT-YHFLGIQMK----SNVHIRVESDVIIKPTWNGD 93 (464)
T ss_dssp SEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHHTSTTCEEEEECSSE-EEECSEECC----TTEEEEECTTCEEEECCCTT
T ss_pred cceeeehhccCcCCCCCchhHHHHHHHHHHHhhccCCcEEEECCCe-EEEeeEecc----CceEEEEcCCcEEEeccCCC
Confidence 45788 9999999999999999999999864454 68899999995 999998886 46777765 78888763
Q ss_pred CCCCCccCcceEEE---EEeccCeEEecce---EEECcCCcc--ccCCCCCCCcccEEEEEEEEeCCCCC--------CC
Q 042447 112 PDNWDPKLARIWLD---FSKLNGVLFQGSG---VIDGSGSKW--WASSCKKNKSESVRVYQVLVSAPEDS--------PN 175 (355)
Q Consensus 112 ~~~~~~~~~~~~i~---~~~~~ni~I~G~G---~IdG~G~~~--~~~~~~~~~~~nv~i~~v~I~~~~~~--------~n 175 (355)
...|+ ++. +.+.+|++|+|.| +|||+|... +.. -.-..++|++|++++|.+.+.- .|
T Consensus 94 ~~~y~------~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~~~rp~~-i~~~~~~Nv~I~gIti~n~w~ih~s~~V~i~N 166 (464)
T 1h80_A 94 GKNHR------LFEVGVNNIVRNFSFQGLGNGFLVDFKDSRDKNLAV-FKLGDVRNYKISNFTIDDNKTIFASILVDVTE 166 (464)
T ss_dssp CSCEE------EEEESSSSCEEEEEEEECTTCEEEECTTCSCCBEEE-EEECSEEEEEEEEEEEECCSCBSCSEEECEEE
T ss_pred cccCC------ceEeecccCccceEEECcCcceEEeCCCCCCCCceE-EEEEeeccEEEeeeEEeccceEeeceeeeeec
Confidence 33332 222 3678999999999 999998631 100 0113458999999999875432 26
Q ss_pred CceeeecCcccEEEEeeEEecCCceEE--eecCCccEEEEeeEEcCCceEEeccCC----cccccceEEEEEEecceecC
Q 042447 176 TDGIHITESTNVVLQDCKIGTGDDCIS--IVNGSSAIKMKRIFCGPGHGISIGSLG----KDNSMGIVTKVVLDTAYLRE 249 (355)
Q Consensus 176 ~DGi~~~~s~nv~I~n~~i~~gDD~I~--ik~g~~ni~i~n~~~~~~~Gi~iGS~g----~~~~~~~v~nV~i~n~~~~~ 249 (355)
+|||++ .|+||+|+||+|.++|||+. ...+++||+|+||+|.+++|+.|.+-+ .. ..+.++||+|+||+|.+
T Consensus 167 tDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIktg~d~IG~~-~~g~v~NI~~~Ni~~~n 244 (464)
T 1h80_A 167 RNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNY-KQGGIRNIFADNIRCSK 244 (464)
T ss_dssp ETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEECCCHHHHHH-TCCEEEEEEEEEEEEES
T ss_pred CCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEECCCEEEEEeCCceeccC-CCCcEEEEEEEeEEEEC
Confidence 799999 68999999999999999875 345789999999999888898886531 22 35689999999999999
Q ss_pred CceeEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEE
Q 042447 250 TANGLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFA 287 (355)
Q Consensus 250 ~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~ 287 (355)
..++++|+. ....++||+|+||+++.. ..++.|.
T Consensus 245 v~~~I~I~p---~~~~isnItfeNI~~t~~-~~aI~i~ 278 (464)
T 1h80_A 245 GLAAVMFGP---HFMKNGDVQVTNVSSVSC-GSAVRSD 278 (464)
T ss_dssp SSEEEEEEC---TTCBCCCEEEEEEEEESS-SCSEEEC
T ss_pred CceeEEEeC---CCceEeEEEEEEEEEEcc-ceeEEEe
Confidence 999999993 345799999999999885 5677664
No 14
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=6.5e-34 Score=291.67 Aligned_cols=250 Identities=20% Similarity=0.241 Sum_probs=184.1
Q ss_pred eEEEeeecCCCCCCCcchHHHHHHHHHHhhcCCCcEEEEcCCeEEEE-eeeeeeccccccEEEEEce----EEeecCCCC
Q 042447 39 VLVNVDSFGAAGDGVSDDTQAFLNAWNTACSTPKSVFLVPAGRHYLV-SATRFKGPCADKLVIQIDG----TIVAPAEPD 113 (355)
Q Consensus 39 ~~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~gg~~V~iP~G~tY~i-~~~~l~~p~~~~~~l~~~g----~l~~~~~~~ 113 (355)
.++||+||||+|||++|||+|||+||++ |++|+||+|+ |++ +++.|++ +++|.+++ +|.++.+..
T Consensus 21 ~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a-----Gg~V~IPaGt-Ylisg~I~L~s----nv~L~Geg~~~t~Lk~~~d~p 90 (772)
T 3gqn_A 21 FGVSVKTYGAKGDGVTDDIRAFEKAIES-----GFPVYVPYGT-FMVSRGIKLPS----NTVLTGAGKRNAVIRFMDSVG 90 (772)
T ss_dssp SSEESGGGTCCCEEEEECHHHHHHHHHT-----TSCEEECSEE-EEESSCEEECS----SCEEEEEEEEEEEEEECTTCC
T ss_pred cEEEeEecccCCCCChhHHHHHHHHHHc-----CCEEEECCcc-EEEEeEEEECC----CcEEEEecCCCCEEEeCCCCC
Confidence 4799999999999999999999999985 3899999995 999 8888864 45555543 677765544
Q ss_pred CCCccCcceEEEEEeccCeEEecceEEECcCCccccCC---CC-C------CCcccEEEEEEEEeCCCC-------CCCC
Q 042447 114 NWDPKLARIWLDFSKLNGVLFQGSGVIDGSGSKWWASS---CK-K------NKSESVRVYQVLVSAPED-------SPNT 176 (355)
Q Consensus 114 ~~~~~~~~~~i~~~~~~ni~I~G~G~IdG~G~~~~~~~---~~-~------~~~~nv~i~~v~I~~~~~-------~~n~ 176 (355)
.|.. ....|+++.+.+||+|+|. +|||+|+.||... +. + ..++|++|+++++.+++. ..+.
T Consensus 91 ~~~~-li~~lI~a~gveNItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~N 168 (772)
T 3gqn_A 91 RGES-LMYNENVTTGNENIFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLD 168 (772)
T ss_dssp SSCC-SEEESCTTTCCEEEEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSS
T ss_pred CCCc-eeeeeeeccCceeEEEEee-EEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcC
Confidence 3321 1224556778899999996 9999999544311 10 0 134899999999976532 0112
Q ss_pred ceeeecC------cccEEEEeeEE-ecCCceEEeecCCccEEEEeeEEcC------CceEEeccCCcccccceEEEEEEe
Q 042447 177 DGIHITE------STNVVLQDCKI-GTGDDCISIVNGSSAIKMKRIFCGP------GHGISIGSLGKDNSMGIVTKVVLD 243 (355)
Q Consensus 177 DGi~~~~------s~nv~I~n~~i-~~gDD~I~ik~g~~ni~i~n~~~~~------~~Gi~iGS~g~~~~~~~v~nV~i~ 243 (355)
||+++.+ |+||+|+||+| .++||||++++ ++||+|+||+|.+ ++||+||+. .+||+|+
T Consensus 169 DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gphG~S~~~GIsIGsg--------s~NVtV~ 239 (772)
T 3gqn_A 169 YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGFEIDDG--------SRHVVLS 239 (772)
T ss_dssp CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSSSSCCSEEECTT--------CEEEEEE
T ss_pred CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECCCCCCCcccEEecCC--------cccEEEE
Confidence 7888887 99999999999 56999999965 8999999999932 479999863 2899999
Q ss_pred cceecCCceeEEEEEeccCCeEEeeEEEEe-EEEeecCcccEEEEcC------CCCceeCEEEEeEEEEeCCCc
Q 042447 244 TAYLRETANGLRIKTWQTSAVKISQIMYRN-ISGTTKSSKAMKFACS------DTVPCSDIVLSNVNLEKKDGT 310 (355)
Q Consensus 244 n~~~~~~~~gi~Ik~~~~~~~~i~nItf~N-I~g~~~~~~~i~i~~~------~~~~~~nI~~~nV~i~~~~g~ 310 (355)
||++.++.+|++||++. .+..++||.|.+ +.........+...+. ...+..||.+.|+....+...
T Consensus 240 Nc~~~nT~nGIRIKt~~-~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~ 312 (772)
T 3gqn_A 240 NNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNK 312 (772)
T ss_dssp EEEEESSSEEEEECCCT-TSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCS
T ss_pred ceEEECCCcEEEEEEeC-CCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEccccc
Confidence 99999999999999875 445688887774 5443221111211121 223678899999888876544
No 15
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.97 E-value=2.2e-30 Score=263.10 Aligned_cols=259 Identities=17% Similarity=0.192 Sum_probs=188.0
Q ss_pred EEEeeecCCCCCCCcchHHHHHHHHHHhhc--------------------------CCCcEEEEcCCeEEEE---eeeee
Q 042447 40 LVNVDSFGAAGDGVSDDTQAFLNAWNTACS--------------------------TPKSVFLVPAGRHYLV---SATRF 90 (355)
Q Consensus 40 ~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~--------------------------~gg~~V~iP~G~tY~i---~~~~l 90 (355)
.+|...|||++||+++.+.++. +|.++|. .++++|+||+|+ |++ +++.|
T Consensus 142 ~~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~-yl~g~~G~i~l 219 (549)
T 1x0c_A 142 EFDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGV-YYFTGHDHMVL 219 (549)
T ss_dssp EEGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEE-EECCTTCCEEE
T ss_pred EECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeE-EecCCceEEEe
Confidence 3444569999999999999887 5544433 257899999995 986 46777
Q ss_pred ecccccc-EEEEEceEEeecCCCCCCCccCcceEEEEEeccCeEEecceEEECcCCccccCC------------------
Q 042447 91 KGPCADK-LVIQIDGTIVAPAEPDNWDPKLARIWLDFSKLNGVLFQGSGVIDGSGSKWWASS------------------ 151 (355)
Q Consensus 91 ~~p~~~~-~~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~~ni~I~G~G~IdG~G~~~~~~~------------------ 151 (355)
++ ... ++|..++.|+++ ++...+++||+|+|.|+|||+|..||...
T Consensus 220 ~s--~~~~L~l~~GA~L~gs-------------~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~ 284 (549)
T 1x0c_A 220 SS--SVTWVYFAPGAYVKGA-------------VEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMW 284 (549)
T ss_dssp CT--TCCEEEECTTEEEESC-------------EEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSE
T ss_pred cC--CCCeEecCCCCEEEEE-------------EEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEe
Confidence 63 233 444444555532 12223789999999999999999988311
Q ss_pred -------CCC---------C----------Cc-cc--EEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEEecCCceEE
Q 042447 152 -------CKK---------N----------KS-ES--VRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGTGDDCIS 202 (355)
Q Consensus 152 -------~~~---------~----------~~-~n--v~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ 202 (355)
|++ + .+ ++ |+|+++++.++. .+|+||||+. +||+|+||+|.++||||+
T Consensus 285 ~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIa 361 (549)
T 1x0c_A 285 RGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLK 361 (549)
T ss_dssp EEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEE
T ss_pred eccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEE
Confidence 100 0 11 36 888888887643 4689999998 999999999999999999
Q ss_pred eecCCccEEEEeeEEcC--Cce-EEeccCCcccccceEEEEEEecceecCCce------eEEEEE---e--c------cC
Q 042447 203 IVNGSSAIKMKRIFCGP--GHG-ISIGSLGKDNSMGIVTKVVLDTAYLRETAN------GLRIKT---W--Q------TS 262 (355)
Q Consensus 203 ik~g~~ni~i~n~~~~~--~~G-i~iGS~g~~~~~~~v~nV~i~n~~~~~~~~------gi~Ik~---~--~------~~ 262 (355)
||+ +||+|+||+|+. +++ |++||. .+.|+||+|+||++.++.+ |..|++ | . ..
T Consensus 362 Iks--~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~ 434 (549)
T 1x0c_A 362 MYY--SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNH 434 (549)
T ss_dssp CCS--SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCC
T ss_pred ECC--CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCC
Confidence 988 999999999964 567 999994 4679999999999988764 555876 2 1 12
Q ss_pred CeEEeeEEEEeEEEeecCcccEEE---EcCCCCceeCEEEEeEEEEeCCC------c------ce------eeeeeeEEe
Q 042447 263 AVKISQIMYRNISGTTKSSKAMKF---ACSDTVPCSDIVLSNVNLEKKDG------T------VE------TYCNSAQGI 321 (355)
Q Consensus 263 ~~~i~nItf~NI~g~~~~~~~i~i---~~~~~~~~~nI~~~nV~i~~~~g------~------~~------~~c~n~~g~ 321 (355)
.+.++||+|+||++.+....++.+ .+.++.+++||+|+||+++...+ . .. ..|.|++..
T Consensus 435 ~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~~~v~nI~f~ 514 (549)
T 1x0c_A 435 STGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIE 514 (549)
T ss_dssp CCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTTTCCBCCEEEEEEE
T ss_pred CceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeCCCccccccceeeeeEEEE
Confidence 457999999999976653222222 35667789999999999987652 1 01 457888877
Q ss_pred ecee
Q 042447 322 GYGI 325 (355)
Q Consensus 322 ~~~~ 325 (355)
...+
T Consensus 515 NV~i 518 (549)
T 1x0c_A 515 GFTV 518 (549)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6654
No 16
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.95 E-value=2.3e-27 Score=241.18 Aligned_cols=235 Identities=16% Similarity=0.149 Sum_probs=161.6
Q ss_pred CCCcEEEEcCCeEEEEeeeeeeccccccEEEEEceEEeecCCCC-CCCcc--CcceEEEEEeccCeEEecceEEECcCCc
Q 042447 70 TPKSVFLVPAGRHYLVSATRFKGPCADKLVIQIDGTIVAPAEPD-NWDPK--LARIWLDFSKLNGVLFQGSGVIDGSGSK 146 (355)
Q Consensus 70 ~gg~~V~iP~G~tY~i~~~~l~~p~~~~~~l~~~g~l~~~~~~~-~~~~~--~~~~~i~~~~~~ni~I~G~G~IdG~G~~ 146 (355)
.++++||||+|+ |++++..+.+||+ +..|.|.+..+.. .|... ....++++.+++||+|+|.|+|||+|+.
T Consensus 229 ~ggg~v~vP~G~-yl~~~~~~~gpc~-----~g~G~i~lkSnvt~L~L~~GA~l~g~i~~~~~~nv~ItG~GtIDG~G~~ 302 (574)
T 1ogo_X 229 GAKSILYFPPGV-YWMNQDQSGNSGK-----LGSNHIRLNSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENYV 302 (574)
T ss_dssp CSSSEEEECSEE-EEECBCTTCCBSC-----SSSCCEECCTTCCEEEECTTEEEESCEEECCSSCEEEESSCEEECTTSC
T ss_pred CCCCEEEECCcE-EEEeccccCCccc-----ccceEEEecCCCceEEecCCcEEEccEEEeCceeEEEEeCEEEeCCCcc
Confidence 468999999995 9994333333332 1112222222221 11100 0113467888999999999999999999
Q ss_pred cccCCCCC-------------C------C-----------------------cccE--EEEEEEEeCCCCCCCCceeeec
Q 042447 147 WWASSCKK-------------N------K-----------------------SESV--RVYQVLVSAPEDSPNTDGIHIT 182 (355)
Q Consensus 147 ~~~~~~~~-------------~------~-----------------------~~nv--~i~~v~I~~~~~~~n~DGi~~~ 182 (355)
||...+.. . . ++|| +|+++++.++. ..|+||||+.
T Consensus 303 ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~-~~nTDGIDi~ 381 (574)
T 1ogo_X 303 YQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF-FFQTDGPEIY 381 (574)
T ss_dssp TTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC-STTCCCCBCC
T ss_pred cccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC-CCCCccCccc
Confidence 98532110 0 1 2667 77777766532 3469999998
Q ss_pred CcccEEEEeeEEecCCceEEeecCCccEEEEeeEEc--CCce-EEeccCCcccccceEEEEEEecceecCCce-------
Q 042447 183 ESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCG--PGHG-ISIGSLGKDNSMGIVTKVVLDTAYLRETAN------- 252 (355)
Q Consensus 183 ~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~--~~~G-i~iGS~g~~~~~~~v~nV~i~n~~~~~~~~------- 252 (355)
+||+|+||+|.++||||+||+ +||+|+||+|. .+|| |+|||. .+.|+||+|+||+|.++.+
T Consensus 382 --~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS~-----~g~V~NV~v~N~~i~~~~~~~~~~~~ 452 (574)
T 1ogo_X 382 --PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGWT-----SRDISGVTIDTLNVIHTRYIKSETVV 452 (574)
T ss_dssp --TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCSS-----CCCEEEEEEEEEEEEECCCSSCCTTT
T ss_pred --CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcCC-----CCcEEEEEEEeEEEECCcccceeccc
Confidence 999999999999999999987 99999999975 4567 999993 4679999999999988754
Q ss_pred -eEEE----------EEeccCCeEEeeEEEEeEEEeecCcccEEEEcCCCCceeCEEEEeEEEEe------CCC-cc---
Q 042447 253 -GLRI----------KTWQTSAVKISQIMYRNISGTTKSSKAMKFACSDTVPCSDIVLSNVNLEK------KDG-TV--- 311 (355)
Q Consensus 253 -gi~I----------k~~~~~~~~i~nItf~NI~g~~~~~~~i~i~~~~~~~~~nI~~~nV~i~~------~~g-~~--- 311 (355)
+..| +...+ .+ | ||+|+||++..... ++ +...+..+++||+|+||+++. ... ..
T Consensus 453 ~g~iiGs~~~y~~~~~~~~g-~g-V-NI~f~NI~~~~v~~-~i-i~i~p~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~ 527 (574)
T 1ogo_X 453 PSAIIGASPFYASGMSPDSR-KS-I-SMTVSNVVCEGLCP-SL-FRITPLQNYKNFVVKNVAFPDGLQTNSIGTGESIIP 527 (574)
T ss_dssp TCEEEEECCCSSSSCCCEEE-EE-E-EEEEEEEEECSSBC-EE-EEECCSEEEEEEEEEEEEETTCBCCSTTCTTCEEEC
T ss_pred cceeeccccccccccccCCC-ce-E-EEEEEeEEEEceeE-ee-EEECCCCCEEEEEEEeEEEeCccccccccccceeEe
Confidence 2322 11112 22 8 99999999987643 33 444666789999999999875 211 11
Q ss_pred --eeeeeeeEEeecee
Q 042447 312 --ETYCNSAQGIGYGI 325 (355)
Q Consensus 312 --~~~c~n~~g~~~~~ 325 (355)
...|.|++.....+
T Consensus 528 G~~~~v~nI~~~NV~i 543 (574)
T 1ogo_X 528 AASGLTMGLAISAWTI 543 (574)
T ss_dssp CCTTCCEEEEEEEEEE
T ss_pred cCCCccceEEEEeEEE
Confidence 13578888777665
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.95 E-value=1e-27 Score=230.52 Aligned_cols=253 Identities=17% Similarity=0.167 Sum_probs=162.7
Q ss_pred ceEEEeeecCCCCCCCcchHHHHHHHHHHhhcC-CCcEEEEcCC----eEEEEe-eeeeeccccccEEEEEc--eEEeec
Q 042447 38 KVLVNVDSFGAAGDGVSDDTQAFLNAWNTACST-PKSVFLVPAG----RHYLVS-ATRFKGPCADKLVIQID--GTIVAP 109 (355)
Q Consensus 38 ~~~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~-gg~~V~iP~G----~tY~i~-~~~l~~p~~~~~~l~~~--g~l~~~ 109 (355)
+..+||+||||+|||++|||+|||+||++||+. +|++||||+| + |+++ ++.|+ ++++|.++ +.++++
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~t-Ylvt~tI~Lk----SnV~L~Ge~~AtIl~s 123 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVG-YIVGSTLLIP----GGVNIRGVGKASQLRA 123 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTC-EEESSCEEEC----TTEEEECCSTTSEEEE
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCccee-EEECCeEEec----CCeEEEEecCceEeec
Confidence 358999999999999999999999999998876 6889999999 6 8885 45655 46666655 344332
Q ss_pred CCC-CC-CCccCcceEEEEEeccCeEEecceEEECcCCccccCCCC-----CCCcccEEEEEEEEe--CCCCC-------
Q 042447 110 AEP-DN-WDPKLARIWLDFSKLNGVLFQGSGVIDGSGSKWWASSCK-----KNKSESVRVYQVLVS--APEDS------- 173 (355)
Q Consensus 110 ~~~-~~-~~~~~~~~~i~~~~~~ni~I~G~G~IdG~G~~~~~~~~~-----~~~~~nv~i~~v~I~--~~~~~------- 173 (355)
... .. +.......|+.+.+++|++|+|.|+|||++..|+..... .-.+++|.+++++.. ....+
T Consensus 124 ~~~I~GtIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~~~Rq~~~~~fdnV~Vn~Vt~~v~~Sg~WTIhPi~C 203 (514)
T 2vbk_A 124 KSGLTGSVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDSVIRQVYGWVFDNVMVNEVETAYLMQGLWHSKFIAC 203 (514)
T ss_dssp CTTCCSEEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCTTCSSCCCEESEEEESCEEEEEEEEEEEESEEEEEEESC
T ss_pred cccccccEEeccCCccccccCceEEEEECCCeEeCCCCCccccceeeeccceEEeeeEEEEeEEEeEeccCcEEEeEecc
Confidence 211 00 000011245667889999999999999987655221111 112478888888542 11110
Q ss_pred ---CCCceeeec-CcccEEEEeeEEecCCceEEeecC-----------CccEEEEeeEEcCCc-eEEeccCCcccccceE
Q 042447 174 ---PNTDGIHIT-ESTNVVLQDCKIGTGDDCISIVNG-----------SSAIKMKRIFCGPGH-GISIGSLGKDNSMGIV 237 (355)
Q Consensus 174 ---~n~DGi~~~-~s~nv~I~n~~i~~gDD~I~ik~g-----------~~ni~i~n~~~~~~~-Gi~iGS~g~~~~~~~v 237 (355)
.-..|+++. +|+||+|.||+|..|||||++|+| ++++. | ++.+|||. +.+.|
T Consensus 204 qnvt~r~gL~f~eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~---------hgav~igSE~---m~~Gv 271 (514)
T 2vbk_A 204 QAGTCRVGLHFLGQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR---------SEAIILDSET---MCIGF 271 (514)
T ss_dssp EEEEEEEEEEEESCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC---------CEEEEEESSE---EEESC
T ss_pred CceecccCccccCCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc---------cccEEECchh---hcccc
Confidence 011478876 799999999999999999999986 44443 5 49999984 34578
Q ss_pred EE-EEEecceecCCceeEEEEEeccCCeEEeeE----EEEeEEEeec--C---cccEEEEcCCCCceeCEEEEeEEEEeC
Q 042447 238 TK-VVLDTAYLRETANGLRIKTWQTSAVKISQI----MYRNISGTTK--S---SKAMKFACSDTVPCSDIVLSNVNLEKK 307 (355)
Q Consensus 238 ~n-V~i~n~~~~~~~~gi~Ik~~~~~~~~i~nI----tf~NI~g~~~--~---~~~i~i~~~~~~~~~nI~~~nV~i~~~ 307 (355)
+| |++++|.+.++.. +.+..-...++.|+|+ .|.|--.... . -.+|++.... ..-+.--++.|+|...
T Consensus 272 k~~v~v~~Clf~~td~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 349 (514)
T 2vbk_A 272 KNAVYVHDCLDLHMEQ-LDLDYCGSTGVVIENVNGGFSFSNSWIAADADGTEQFTGIYFRTPT-STQSHKIVSGVHINTA 349 (514)
T ss_dssp SEEEEESCCEEEEEES-EEEEEESSEEEEESCCEEEEEEEEEEEEECTTCCSCCEEEEECCCS-SCCCCEEEEEEEEECC
T ss_pred cccEEEEeeeccCCcc-ccccccCCcceEEEeccCceeeccceEEecCCCcceeEEEEEeCCC-ccccceeeeeeEeccc
Confidence 99 9999999988743 3333322333445544 3443221111 1 1234443322 2223344667777776
Q ss_pred CC
Q 042447 308 DG 309 (355)
Q Consensus 308 ~g 309 (355)
..
T Consensus 350 ~~ 351 (514)
T 2vbk_A 350 NK 351 (514)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.94 E-value=3e-25 Score=216.23 Aligned_cols=241 Identities=20% Similarity=0.281 Sum_probs=156.1
Q ss_pred EEEeeecCCCCCCCcchHHHHHHHHHHhhcCCCcEEEEcCCeEEEEe--------eeeeeccccccEEEEEce----EEe
Q 042447 40 LVNVDSFGAAGDGVSDDTQAFLNAWNTACSTPKSVFLVPAGRHYLVS--------ATRFKGPCADKLVIQIDG----TIV 107 (355)
Q Consensus 40 ~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~gg~~V~iP~G~tY~i~--------~~~l~~p~~~~~~l~~~g----~l~ 107 (355)
++||++|||+|||++|||+|||+||++||+.++++|+||+|+ |++. ++.|+ ++++|.++| +|+
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~gg~~v~~p~G~-y~~~~~~~~~~g~l~~~----~~v~l~g~g~~~t~l~ 76 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAAGGGTVYLPAGE-YRVSAAGEPGDGCLMLK----DGVYLAGAGMGETVIK 76 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHTTSEEEEECSEE-EEECCCSSGGGCSEECC----TTEEEEESSBTTEEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhcCCCEEEECCeE-EEEcccccCCcccEEec----CCeEEEEcCCCCcEEE
Confidence 589999999999999999999999999887778999999995 9985 45543 688888875 445
Q ss_pred ecCCCCCCCcc-----CcceEEEEEeccCeEEecc-----eEEECcCCccccCCC--CCCCcccEEEEEEEEeCCCC---
Q 042447 108 APAEPDNWDPK-----LARIWLDFSKLNGVLFQGS-----GVIDGSGSKWWASSC--KKNKSESVRVYQVLVSAPED--- 172 (355)
Q Consensus 108 ~~~~~~~~~~~-----~~~~~i~~~~~~ni~I~G~-----G~IdG~G~~~~~~~~--~~~~~~nv~i~~v~I~~~~~--- 172 (355)
+......+... ....+ .+.++++++|+|. |++|| ||...+ ....+++++|++++|.+...
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~~~~~~~~nv~I~~~~i~n~~~~gi 151 (377)
T 2pyg_A 77 LIDGSDQKITGMVRSAYGEET-SNFGMRDLTLDGNRDNTSGKVDG----WFNGYIPGGDGADRDVTIERVEVREMSGYGF 151 (377)
T ss_dssp ECTTCBSCEEEEEECCTTSCC-EEEEEEEEEEECCGGGCBSCEEE----EEECSCTTSSCCEEEEEEEEEEEECCSSCSE
T ss_pred ecCCCccCccceEeccCCCcc-eEEEEEEEEEECCCccCCccccc----eecccCccccccccceEEEeEEEEecccceE
Confidence 55443322211 00011 2346788999997 88887 886532 22356899999999886421
Q ss_pred -----------------CCCCceeeecCcccEEEEee-EEecCCceEEeecCCccEEEEeeEEcCC-ceEEe---ccCCc
Q 042447 173 -----------------SPNTDGIHITESTNVVLQDC-KIGTGDDCISIVNGSSAIKMKRIFCGPG-HGISI---GSLGK 230 (355)
Q Consensus 173 -----------------~~n~DGi~~~~s~nv~I~n~-~i~~gDD~I~ik~g~~ni~i~n~~~~~~-~Gi~i---GS~g~ 230 (355)
....|||.+..|.+++|++| .+.+.+|+|.+..++.+++|+|+++... .|+.+ |++.
T Consensus 152 ~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~- 230 (377)
T 2pyg_A 152 DPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLED- 230 (377)
T ss_dssp EECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSC-
T ss_pred EeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECccCceEEEeccccC-
Confidence 14567777777777888877 4466788888777688888888888543 34444 2221
Q ss_pred ccccceEEEEEEecceecC-CceeEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEEcCCCCceeCEEEEeEEEEe
Q 042447 231 DNSMGIVTKVVLDTAYLRE-TANGLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFACSDTVPCSDIVLSNVNLEK 306 (355)
Q Consensus 231 ~~~~~~v~nV~i~n~~~~~-~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~~~~~~~~~nI~~~nV~i~~ 306 (355)
.....|++|+++++.+ ...|+.++. .++++++|.+.......++.|.+ +++++|+|..+..
T Consensus 231 ---~~~s~nv~i~~N~~~~n~~~Gi~~~~-------~~~v~i~~N~i~~~~~~GI~i~g-----~~~~~i~~N~i~~ 292 (377)
T 2pyg_A 231 ---LALPSNILIDGGAYYDNAREGVLLKM-------TSDITLQNADIHGNGSSGVRVYG-----AQDVQILDNQIHD 292 (377)
T ss_dssp ---CCCCEEEEEESCEEESCSSCSEEEEE-------EEEEEEESCEEESCSSCSEEEEE-----EEEEEEESCEEES
T ss_pred ---CCCCccEEEECCEEEcCccCceEecc-------ccCeEEECCEEECCCCceEEEec-----CCCcEEECcEEEC
Confidence 1123555666665544 234555432 44555555544433334555543 3455555555553
No 19
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.86 E-value=2.5e-20 Score=191.41 Aligned_cols=214 Identities=21% Similarity=0.288 Sum_probs=143.9
Q ss_pred ceeccCCCccccc-CCCceEEEeeecCCCCCCCcchHHHHHHHHHHhhcCCC---------cEEEEcCCeEEEEe-eeee
Q 042447 22 EVELFEEPSWTSE-RGGKVLVNVDSFGAAGDGVSDDTQAFLNAWNTACSTPK---------SVFLVPAGRHYLVS-ATRF 90 (355)
Q Consensus 22 ~~~~~~~~~~~~~-~~~~~~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~gg---------~~V~iP~G~tY~i~-~~~l 90 (355)
+++..+.+++.+. ..++..+||+||||+|||++|||+|||+||+++.+.++ ++||||+|+ |++. ++.+
T Consensus 30 ~i~h~G~~p~~~~~~~y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~Gt-Ylvs~tI~l 108 (758)
T 3eqn_A 30 NIQHQGIAAFNGNPGGYPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGT-YKVSSPLVV 108 (758)
T ss_dssp HSCCCCCCTTSSCTTTCCSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSE-EEESSCEEC
T ss_pred ccccCCcCCCCCCCCCCeEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccccceEEEECCce-EEEcccEEc
Confidence 3555677777654 46788999999999999999999999999997533222 589999995 9876 4555
Q ss_pred eccccccEEEEEce----EEeecCCCCCCCccCcceEEEEEeccCeEEecceEEECcCCccccCCCCCCCcccEEEEEEE
Q 042447 91 KGPCADKLVIQIDG----TIVAPAEPDNWDPKLARIWLDFSKLNGVLFQGSGVIDGSGSKWWASSCKKNKSESVRVYQVL 166 (355)
Q Consensus 91 ~~p~~~~~~l~~~g----~l~~~~~~~~~~~~~~~~~i~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~~~~~nv~i~~v~ 166 (355)
+ +++.|..++ +|++++. |. +. . .|.+ ...+++|..||.... .--..|+|+.
T Consensus 109 ~----~~t~L~G~~~~~pvIka~~~---F~-----------G~-~-li~~-d~y~~~G~~w~~~~~----~F~r~irNlv 163 (758)
T 3eqn_A 109 L----YQTQLIGDAKNLPTLLAAPN---FS-----------GI-A-LIDA-DPYLAGGAQYYVNQN----NFFRSVRNFV 163 (758)
T ss_dssp C----TTEEEEECSSSCCEEEECTT---CC-----------SS-C-SEES-SCBCGGGCBSSCGGG----CCCEEEEEEE
T ss_pred c----CCeEEEecCCCCCeEecCCC---CC-----------Cc-c-eeec-cccCCCCcccccccc----ceeeeecceE
Confidence 4 567777764 4554332 11 10 0 1333 334567788885421 1344688888
Q ss_pred EeCCCCCCCCceeeecCcccEEEEeeEEec------CCceEEeecCCccEEEEeeEEcCC-ceEEeccCCcccccceEEE
Q 042447 167 VSAPEDSPNTDGIHITESTNVVLQDCKIGT------GDDCISIVNGSSAIKMKRIFCGPG-HGISIGSLGKDNSMGIVTK 239 (355)
Q Consensus 167 I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~------gDD~I~ik~g~~ni~i~n~~~~~~-~Gi~iGS~g~~~~~~~v~n 239 (355)
|+.....+..-||++..|++..|+||+|.. ++++|.++.+ .+..++++++.++ .|+.+|.. .-.++|
T Consensus 164 iD~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~G-Sgg~i~Dl~f~GG~~G~~~gnQ-----QfT~rn 237 (758)
T 3eqn_A 164 IDLRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENG-SGGFLGDLVFNGGNIGATFGNQ-----QFTVRN 237 (758)
T ss_dssp EECTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSC-CCCEEEEEEEESCSEEEEEECS-----CCEEEE
T ss_pred EeccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCC-CceEEEeeEEeCCceEEEcCCc-----ceEEec
Confidence 886544445778999999999999999964 3789999654 5678999999765 59999774 224566
Q ss_pred EEEecceecCCceeEEEEEeccCCeEEeeEEEEeE
Q 042447 240 VVLDTAYLRETANGLRIKTWQTSAVKISQIMYRNI 274 (355)
Q Consensus 240 V~i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI 274 (355)
++|+||. .+|.+. | .-+..+.+++|+|+
T Consensus 238 ltF~~~~-----taI~~~-w-~wgwt~~~~~i~nc 265 (758)
T 3eqn_A 238 LTFNNAN-----TAINAI-W-NWGWTFQRITINNC 265 (758)
T ss_dssp EEEESCS-----EEEEEE-E-BSCEEEEEEEEESC
T ss_pred cEEeChH-----HHHhhh-c-CceEEEEEeEEECC
Confidence 6666553 344443 1 23344555555544
No 20
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.64 E-value=1.8e-15 Score=145.18 Aligned_cols=156 Identities=16% Similarity=0.211 Sum_probs=125.1
Q ss_pred CcccEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEEecCCceEEeecC-----CccEEEEeeEEcC-CceEEeccCC
Q 042447 156 KSESVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGTGDDCISIVNG-----SSAIKMKRIFCGP-GHGISIGSLG 229 (355)
Q Consensus 156 ~~~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g-----~~ni~i~n~~~~~-~~Gi~iGS~g 229 (355)
.++||+|+|++|++.. |.|.+.+++||+|+||.+..++. |+|.+- -+||+++||++.. ..|+.|.+..
T Consensus 158 ~s~nV~I~n~~i~~gD-----DcIaiksg~nI~i~n~~~~~ghG-isIGS~g~~~~v~nV~v~n~~~~~t~~girIKt~~ 231 (335)
T 1k5c_A 158 SANNVTIQNCIVKNQD-----DCIAINDGNNIRFENNQCSGGHG-ISIGSIATGKHVSNVVIKGNTVTRSMYGVRIKAQR 231 (335)
T ss_dssp ECSSEEEESCEEESSS-----CSEEEEEEEEEEEESCEEESSCC-EEEEEECTTCEEEEEEEESCEEEEEEEEEEEEEET
T ss_pred cCCeEEEEeeEEEcCC-----CEEEeeCCeeEEEEEEEEECCcc-CeEeeccCCCCEEEEEEEeeEEECCCceEEEEEeC
Confidence 4599999999998753 68999988999999999998874 998542 4789999999865 4589998742
Q ss_pred ccccc-ceEEEEEEecceecCCc-eeEEEEEec-------cCCeEEeeEEEEeEE--EeecC-cccEEEEcCCCCceeCE
Q 042447 230 KDNSM-GIVTKVVLDTAYLRETA-NGLRIKTWQ-------TSAVKISQIMYRNIS--GTTKS-SKAMKFACSDTVPCSDI 297 (355)
Q Consensus 230 ~~~~~-~~v~nV~i~n~~~~~~~-~gi~Ik~~~-------~~~~~i~nItf~NI~--g~~~~-~~~i~i~~~~~~~~~nI 297 (355)
. .. +.++||+|+|+++++.. +++.|.... .+.+.|+||+|+||+ |+... ..++.|.|++ ||+||
T Consensus 232 g--~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~~--~c~ni 307 (335)
T 1k5c_A 232 T--ATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECGN--CSGNW 307 (335)
T ss_dssp T--CCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCCSSSCEEEEEECSSCEEEEECTTCEEEEEECSS--EESEE
T ss_pred C--CCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCCCCceEEEEEEEEEEEeeEEcCCceEEEEECCC--cCCCE
Confidence 1 23 67999999999999986 699887532 235799999999999 87765 6789999986 99999
Q ss_pred EEEeEEEEeCCCcceeeeeeeEEee
Q 042447 298 VLSNVNLEKKDGTVETYCNSAQGIG 322 (355)
Q Consensus 298 ~~~nV~i~~~~g~~~~~c~n~~g~~ 322 (355)
+|+||+|+..+.. ...|.+++..+
T Consensus 308 ~~~nv~i~~~~~~-~~~~~~~~~~g 331 (335)
T 1k5c_A 308 NWSQLTVTGGKAG-TIKSDKAKITG 331 (335)
T ss_dssp EEEEEEEESSBCC-CEECTTCEEEE
T ss_pred EEEeEEEEcCCCC-ceEeEEeEeeC
Confidence 9999999986543 34566666543
No 21
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.59 E-value=1.3e-14 Score=149.62 Aligned_cols=166 Identities=11% Similarity=0.068 Sum_probs=124.3
Q ss_pred cccEEEEEEEEeCCCC------CCCCceeeecCcccEEEEeeEEecCCceEEeecC----CccEEEEeeEEcCC-ceEEe
Q 042447 157 SESVRVYQVLVSAPED------SPNTDGIHITESTNVVLQDCKIGTGDDCISIVNG----SSAIKMKRIFCGPG-HGISI 225 (355)
Q Consensus 157 ~~nv~i~~v~I~~~~~------~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g----~~ni~i~n~~~~~~-~Gi~i 225 (355)
++||+|++++|++..+ ..+.||++...|+||+|+||++..++++++|.+. .+||+++||+|.+. +|+.|
T Consensus 388 s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirI 467 (608)
T 2uvf_A 388 SQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRA 467 (608)
T ss_dssp CEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEE
T ss_pred CceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEE
Confidence 4899999999987643 3466777766799999999999999999888663 48999999999765 79999
Q ss_pred ccCCcccccceEEEEEEecceecCC-ceeEEEEEecc------------CCeEEeeEEEEeEEEeecCc--ccEEE--Ec
Q 042447 226 GSLGKDNSMGIVTKVVLDTAYLRET-ANGLRIKTWQT------------SAVKISQIMYRNISGTTKSS--KAMKF--AC 288 (355)
Q Consensus 226 GS~g~~~~~~~v~nV~i~n~~~~~~-~~gi~Ik~~~~------------~~~~i~nItf~NI~g~~~~~--~~i~i--~~ 288 (355)
++... ..+.++||+|+|++|.+. .++|.|+.... ....++||+|+||+...... .++.| .|
T Consensus 468 Kt~~g--~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~~ 545 (608)
T 2uvf_A 468 KSTST--IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGDT 545 (608)
T ss_dssp EEETT--TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECBG
T ss_pred eeecC--CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEEc
Confidence 88532 346799999999999998 59999986542 12356677666666554322 34444 46
Q ss_pred CCCCceeCEEEEeEEEEeCCCcceeeeeeeEEeece
Q 042447 289 SDTVPCSDIVLSNVNLEKKDGTVETYCNSAQGIGYG 324 (355)
Q Consensus 289 ~~~~~~~nI~~~nV~i~~~~g~~~~~c~n~~g~~~~ 324 (355)
.+..||+||+|+||+++...+.....|.|.+.....
T Consensus 546 ~~~~p~~ni~~~nv~i~~~~~~~i~~~~~~~~~nv~ 581 (608)
T 2uvf_A 546 ANKAWHRLVHVNNVQLNNVTPTAISDLRDSEFNKVT 581 (608)
T ss_dssp GGTBCEEEEEEEEEEEESCCCCEEESEESCEEEEEE
T ss_pred CCCCccccEEEEeEEEEccCceeEEeccCceEEeEE
Confidence 666799999999999998775443445555544433
No 22
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.50 E-value=1.6e-12 Score=132.33 Aligned_cols=218 Identities=10% Similarity=0.043 Sum_probs=143.3
Q ss_pred CcE-EEEcCCeEEEEeeeeeeccccccEEEEEceEEeecCCC------CCCCcc-CcceEEE------EEeccCeEEecc
Q 042447 72 KSV-FLVPAGRHYLVSATRFKGPCADKLVIQIDGTIVAPAEP------DNWDPK-LARIWLD------FSKLNGVLFQGS 137 (355)
Q Consensus 72 g~~-V~iP~G~tY~i~~~~l~~p~~~~~~l~~~g~l~~~~~~------~~~~~~-~~~~~i~------~~~~~ni~I~G~ 137 (355)
+-+ +++++|. ++.+.+.+.. ..++.|...|+|-+.... ..|+.. .....+. +.+++||.|+|-
T Consensus 264 nvt~L~L~~GA-~l~g~i~~~~--~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Gi 340 (574)
T 1ogo_X 264 NTYWVYLAPGA-YVKGAIEYFT--KQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGP 340 (574)
T ss_dssp TCCEEEECTTE-EEESCEEECC--SSCEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESC
T ss_pred CCceEEecCCc-EEEccEEEeC--ceeEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECe
Confidence 456 8888885 7777776664 478999999998654311 111100 0011122 225677777775
Q ss_pred eEEECcCCcccc--CCCCCC----------------------CcccEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeE
Q 042447 138 GVIDGSGSKWWA--SSCKKN----------------------KSESVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCK 193 (355)
Q Consensus 138 G~IdG~G~~~~~--~~~~~~----------------------~~~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~ 193 (355)
.+.+.. .|.- ..|.+. . +||+|+|++|++.. |+|.+.+ +||+|+||.
T Consensus 341 ti~NSp--~w~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~-~NV~I~nc~I~~gD-----DcIaIks-~NI~I~nc~ 411 (574)
T 1ogo_X 341 TINAPP--FNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY-PNSVVHDVFWHVND-----DAIKIYY-SGASVSRAT 411 (574)
T ss_dssp EEECCS--SCSEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC-TTCEEEEEEEEESS-----CSEECCS-TTCEEEEEE
T ss_pred EEECCC--CcEEeecCCCChhhEEEeeEeeCCCCCCCccCccc-CCEEEEeeEEECCC-----CEEEECC-ccEEEEeEE
Confidence 555532 1111 011111 1 89999999999854 6898875 999999999
Q ss_pred EecCCc-e-EEeec---CCccEEEEeeEEcCCc---------eEEeccCCccc------ccceEEEEEEecceecCCcee
Q 042447 194 IGTGDD-C-ISIVN---GSSAIKMKRIFCGPGH---------GISIGSLGKDN------SMGIVTKVVLDTAYLRETANG 253 (355)
Q Consensus 194 i~~gDD-~-I~ik~---g~~ni~i~n~~~~~~~---------Gi~iGS~g~~~------~~~~v~nV~i~n~~~~~~~~g 253 (355)
+..++. + |++.+ ..+||+|+||++.... |..||++..+. ....| ||+|+|+++.+..++
T Consensus 412 i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~gV-NI~f~NI~~~~v~~~ 490 (574)
T 1ogo_X 412 IWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKSI-SMTVSNVVCEGLCPS 490 (574)
T ss_dssp EEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEEE-EEEEEEEEECSSBCE
T ss_pred EECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCCceE-EEEEEeEEEEceeEe
Confidence 998764 4 88854 4689999999995322 34455543221 11228 999999999998887
Q ss_pred EEEEEeccCCeEEeeEEEEeEEEee------cCcccEEEEcCCCCceeCEEEEeEEEEe
Q 042447 254 LRIKTWQTSAVKISQIMYRNISGTT------KSSKAMKFACSDTVPCSDIVLSNVNLEK 306 (355)
Q Consensus 254 i~Ik~~~~~~~~i~nItf~NI~g~~------~~~~~i~i~~~~~~~~~nI~~~nV~i~~ 306 (355)
+ |... ....|+||+|+||+.+. ....+..+.+.+ .+|++|+|+||+|..
T Consensus 491 i-i~i~--p~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g 545 (574)
T 1ogo_X 491 L-FRIT--PLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGG 545 (574)
T ss_dssp E-EEEC--CSEEEEEEEEEEEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETT
T ss_pred e-EEEC--CCCCEEEEEEEeEEEeCccccccccccceeEecCC-CccceEEEEeEEEeC
Confidence 5 4433 34579999999999654 222345566666 899999999999954
No 23
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.45 E-value=6.3e-13 Score=132.01 Aligned_cols=182 Identities=10% Similarity=0.124 Sum_probs=127.2
Q ss_pred eEEEEEeccCeEEecceEEECcCCccccCCC--------------------CCCCcccEEEEEEEEeCCCC------CCC
Q 042447 122 IWLDFSKLNGVLFQGSGVIDGSGSKWWASSC--------------------KKNKSESVRVYQVLVSAPED------SPN 175 (355)
Q Consensus 122 ~~i~~~~~~ni~I~G~G~IdG~G~~~~~~~~--------------------~~~~~~nv~i~~v~I~~~~~------~~n 175 (355)
.++.|.+++|++|+|--+.+..........| ....++||+|++++|++..+ ..+
T Consensus 191 ~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~~ 270 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRD 270 (448)
T ss_dssp CSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEESSEEEEEBCCCH
T ss_pred eEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeCCCcEEeccCcc
Confidence 4678888888888885555443211111111 11235899999999987532 233
Q ss_pred CceeeecC-cccEEEEeeEE--ecCCceEEeecC----CccEEEEeeEEcCC-ceEEeccCCcccccceEEEEEEeccee
Q 042447 176 TDGIHITE-STNVVLQDCKI--GTGDDCISIVNG----SSAIKMKRIFCGPG-HGISIGSLGKDNSMGIVTKVVLDTAYL 247 (355)
Q Consensus 176 ~DGi~~~~-s~nv~I~n~~i--~~gDD~I~ik~g----~~ni~i~n~~~~~~-~Gi~iGS~g~~~~~~~v~nV~i~n~~~ 247 (355)
.||+++.. |+||+|+||++ ..++.||+|.+. .+||+++||++... +|+.|++... ..+.++||+|+|+++
T Consensus 271 ~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g--~gG~v~nI~f~ni~m 348 (448)
T 3jur_A 271 ADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSR--RGGYMENIFFIDNVA 348 (448)
T ss_dssp HHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTT--TCSEEEEEEEESCEE
T ss_pred ccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcC--CCceEeeEEEEEEEE
Confidence 44554443 79999999999 567779999654 48999999999664 7999988532 347899999999999
Q ss_pred cCCceeE-EEEEec--------------------------------cCCeEEeeEEEEeEEEeecCcccEEEEc----CC
Q 042447 248 RETANGL-RIKTWQ--------------------------------TSAVKISQIMYRNISGTTKSSKAMKFAC----SD 290 (355)
Q Consensus 248 ~~~~~gi-~Ik~~~--------------------------------~~~~~i~nItf~NI~g~~~~~~~i~i~~----~~ 290 (355)
.+..+++ .|+... ....+++||+|+||+.+.. ..+..+.. .+
T Consensus 349 ~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~~~~p~~~I~~~nv~i~~~-~~~~~~~~~~~~~~ 427 (448)
T 3jur_A 349 VNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEGA-KISVLLEFGQLGME 427 (448)
T ss_dssp EEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECBTTBCEEEEEEEEEEEESC-SEEEEEEEEEEEEE
T ss_pred ECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeCCCCCEeeEEEEEEEEEcc-ccceeEeccccccc
Confidence 8888776 664311 2345799999999998764 33445543 33
Q ss_pred CCceeCEEEEeEEEEe
Q 042447 291 TVPCSDIVLSNVNLEK 306 (355)
Q Consensus 291 ~~~~~nI~~~nV~i~~ 306 (355)
...++||+|+||.|..
T Consensus 428 ~~~~~~~~~~nv~ing 443 (448)
T 3jur_A 428 NVIMNGSRFEKLYIEG 443 (448)
T ss_dssp EEEETTEEEEEEEEEE
T ss_pred cceecccEEEEEEEcC
Confidence 4568899999999975
No 24
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.45 E-value=2.6e-12 Score=130.46 Aligned_cols=226 Identities=9% Similarity=0.063 Sum_probs=140.1
Q ss_pred CcE-EEEcCCeEEEEeeeeeeccccccEEEEEceEEeecCCC------CCCCcc---Ccc--eE---EEEEeccCeEEec
Q 042447 72 KSV-FLVPAGRHYLVSATRFKGPCADKLVIQIDGTIVAPAEP------DNWDPK---LAR--IW---LDFSKLNGVLFQG 136 (355)
Q Consensus 72 g~~-V~iP~G~tY~i~~~~l~~p~~~~~~l~~~g~l~~~~~~------~~~~~~---~~~--~~---i~~~~~~ni~I~G 136 (355)
+.+ +++++|. ++.+++.+... ..+++|...|+|-+.... ..|... .++ .+ +.+.+++|+.|+|
T Consensus 222 ~~~~L~l~~GA-~L~gs~~~~~~-~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~G 299 (549)
T 1x0c_A 222 SVTWVYFAPGA-YVKGAVEFLST-ASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNG 299 (549)
T ss_dssp TCCEEEECTTE-EEESCEEECCC-SSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEES
T ss_pred CCCeEecCCCC-EEEEEEEEecC-ceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEEC
Confidence 567 9999996 87777766532 368899888998765421 112100 000 00 1114445555555
Q ss_pred ceEEECcC------------------------CccccCCCCCCCcccEEEEEEEEeCCCCCCCCceeeecCcccEEEEee
Q 042447 137 SGVIDGSG------------------------SKWWASSCKKNKSESVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDC 192 (355)
Q Consensus 137 ~G~IdG~G------------------------~~~~~~~~~~~~~~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~ 192 (355)
-.+.+..- ..+|....-.-. +||+|+|++|++.. |+|.+.+ +||+|+||
T Consensus 300 iti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~-~nV~I~n~~i~~gD-----DcIaIks-~NI~I~n~ 372 (549)
T 1x0c_A 300 VTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY-PGTILQDVFYHTDD-----DGLKMYY-SNVTARNI 372 (549)
T ss_dssp CEEECCSSCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC-TTCEEEEEEEEESS-----CCEECCS-SSEEEEEE
T ss_pred cEEECCCceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc-CCEEEEeeEEeCCC-----CEEEECC-CCEEEEee
Confidence 33333211 011211100112 99999999999853 6898886 99999999
Q ss_pred EEecCCc-e-EEeec---CCccEEEEeeEEcCCc-------eEEeccC-----C---cc-cccceEEEEEEecceecCCc
Q 042447 193 KIGTGDD-C-ISIVN---GSSAIKMKRIFCGPGH-------GISIGSL-----G---KD-NSMGIVTKVVLDTAYLRETA 251 (355)
Q Consensus 193 ~i~~gDD-~-I~ik~---g~~ni~i~n~~~~~~~-------Gi~iGS~-----g---~~-~~~~~v~nV~i~n~~~~~~~ 251 (355)
.+..++. + |++.+ ..+||+|+||++.... |.-|++. + .. ...+.++||+|+|+++++..
T Consensus 373 ~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~ 452 (549)
T 1x0c_A 373 VMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFR 452 (549)
T ss_dssp EEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEE
T ss_pred EEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCCceEccEEEEeEEEEeEE
Confidence 9987654 4 78753 3689999999985432 3114331 1 11 11457999999999998876
Q ss_pred -eeEEEEEe-ccCCeEEeeEEEEeEEEeecC-----cccEEEEcCCC------CceeCEEEEeEEEEe
Q 042447 252 -NGLRIKTW-QTSAVKISQIMYRNISGTTKS-----SKAMKFACSDT------VPCSDIVLSNVNLEK 306 (355)
Q Consensus 252 -~gi~Ik~~-~~~~~~i~nItf~NI~g~~~~-----~~~i~i~~~~~------~~~~nI~~~nV~i~~ 306 (355)
+|+.+... ......++||+|+||+.+... ..+..+.+.+. .+|+||+|+||+|..
T Consensus 453 ~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~~~v~nI~f~NV~i~G 520 (549)
T 1x0c_A 453 AEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGN 520 (549)
T ss_dssp EEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTTTCCBCCEEEEEEEEEEETT
T ss_pred EeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeCCCccccccceeeeeEEEEeEEEeC
Confidence 55544211 123447999999999976553 23445554322 789999999999864
No 25
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.34 E-value=3.6e-11 Score=118.65 Aligned_cols=151 Identities=13% Similarity=0.199 Sum_probs=106.7
Q ss_pred cEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEEec----CCceEEeecCCccEEEEeeEEcCC-ceEEeccCCcccc
Q 042447 159 SVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGT----GDDCISIVNGSSAIKMKRIFCGPG-HGISIGSLGKDNS 233 (355)
Q Consensus 159 nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~----gDD~I~ik~g~~ni~i~n~~~~~~-~Gi~iGS~g~~~~ 233 (355)
|++|++++|.++.. .+|++..|+||+|+||+|.+ +.|+|.+.. +||+|+||++..+ .+|+|++
T Consensus 137 nv~I~~iti~nsp~----~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~--~nV~I~n~~i~~gDD~Iai~s------ 204 (422)
T 1rmg_A 137 HFSVHDIILVDAPA----FHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG--SNIWVHDVEVTNKDECVTVKS------ 204 (422)
T ss_dssp EEEEEEEEEECCSS----CSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE--EEEEEEEEEEESSSEEEEEEE------
T ss_pred eEEEECeEEECCCc----eEEEEeCcCCEEEEeEEEECCCCCCCccEeecC--CeEEEEeeEEeCCCCeEEeCC------
Confidence 47788888887543 48999999999999999987 458999965 9999999999765 4899987
Q ss_pred cceEEEEEEecceecCCceeEEEEEeccCCeEEe----------------------------eEEEEeEEEeecCcccEE
Q 042447 234 MGIVTKVVLDTAYLRETANGLRIKTWQTSAVKIS----------------------------QIMYRNISGTTKSSKAMK 285 (355)
Q Consensus 234 ~~~v~nV~i~n~~~~~~~~gi~Ik~~~~~~~~i~----------------------------nItf~NI~g~~~~~~~i~ 285 (355)
..+||+|+||++... .|+.|++.. ....++ ||+|+||++... ..++.
T Consensus 205 --~~~nI~I~n~~~~~~-~GisIGS~g-~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g~G~v~nI~~~NI~~~~v-~~~i~ 279 (422)
T 1rmg_A 205 --PANNILVESIYCNWS-GGCAMGSLG-ADTDVTDIVYRNVYTWSSNQMYMIKSNGGSGTVSNVLLENFIGHGN-AYSLD 279 (422)
T ss_dssp --EEEEEEEEEEEEESS-SEEEEEEEC-TTEEEEEEEEEEEEEESSSCSEEEEEBBCCEEEEEEEEEEEEEEEE-SCSEE
T ss_pred --CCcCEEEEeEEEcCC-cceeecccC-CCCcEEEEEEEeEEEeccceEEEEEecCCCcEEEEEEEEeEEEECc-cccEE
Confidence 358999999998776 599997642 122344 445555544443 33455
Q ss_pred EEc---------CCCCceeCEEEEeEEEEeCCC----c------ceeeeeeeEEeeceec
Q 042447 286 FAC---------SDTVPCSDIVLSNVNLEKKDG----T------VETYCNSAQGIGYGIV 326 (355)
Q Consensus 286 i~~---------~~~~~~~nI~~~nV~i~~~~g----~------~~~~c~n~~g~~~~~~ 326 (355)
|.. ....+++||+|+||+.+...| . ....|.|++.....+.
T Consensus 280 i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~ 339 (422)
T 1rmg_A 280 IDGYWSSMTAVAGDGVQLNNITVKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIW 339 (422)
T ss_dssp EETBCTTSCCBSSSCCEEEEEEEEEEEEEESCTTTSCSEEEECBTTBCEEEEEEEEEEEE
T ss_pred EEeeccCCCcccCCCceEEEEEEEeEEEEecccccceeEEEEeCCCCcEeeEEEEeEEEE
Confidence 541 123467788888887777532 1 1245778777777664
No 26
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.26 E-value=9.3e-11 Score=113.48 Aligned_cols=130 Identities=12% Similarity=0.186 Sum_probs=101.5
Q ss_pred EEEEEEeCCCCCCCCceeeecCcccEEEEeeEEec---------CCceEEeecCCccEEEEeeEEcCC-ceEEeccCCcc
Q 042447 162 VYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGT---------GDDCISIVNGSSAIKMKRIFCGPG-HGISIGSLGKD 231 (355)
Q Consensus 162 i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~---------gDD~I~ik~g~~ni~i~n~~~~~~-~Gi~iGS~g~~ 231 (355)
|+++++.+++. .++++. |+||+|+|++|.+ .-|+|.+ ..++||+|+||++..+ .+|+|++.
T Consensus 139 i~~iti~nsp~----~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi-~~s~nV~I~n~~i~~gDDcIaiksg--- 209 (362)
T 1czf_A 139 ITGLNIKNTPL----MAFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDV-GNSVGVNIIKPWVHNQDDCLAVNSG--- 209 (362)
T ss_dssp EESCEEECCSS----CCEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEE-CSCEEEEEESCEEECSSCSEEESSE---
T ss_pred EEEEEEecCCc----cEEEEe-eCCEEEEEEEEECCccccccCCCCCceee-cCcceEEEEeeEEecCCCEEEEeCC---
Confidence 44455555433 369999 9999999999976 1477888 4689999999999865 58999872
Q ss_pred cccceEEEEEEecceecCCceeEEEEEec-cCCeEEeeEEEEeEEEeecCcccEEEEcCC--CCceeCEEEEeEEEEeCC
Q 042447 232 NSMGIVTKVVLDTAYLRETANGLRIKTWQ-TSAVKISQIMYRNISGTTKSSKAMKFACSD--TVPCSDIVLSNVNLEKKD 308 (355)
Q Consensus 232 ~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~-~~~~~i~nItf~NI~g~~~~~~~i~i~~~~--~~~~~nI~~~nV~i~~~~ 308 (355)
+||+|+||++... .|+.|.+.. .....++||+|+|++.... ..++.|...+ .+.++||+|+||.++...
T Consensus 210 ------~nI~i~n~~~~~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~t-~~GirIKt~~g~~G~v~nI~~~ni~~~~v~ 281 (362)
T 1czf_A 210 ------ENIWFTGGTCIGG-HGLSIGSVGDRSNNVVKNVTIEHSTVSNS-ENAVRIKTISGATGSVSEITYSNIVMSGIS 281 (362)
T ss_dssp ------EEEEEESCEEESS-CCEEEEEECSSSCCEEEEEEEEEEEEEEE-EEEEEEEEETTCCEEEEEEEEEEEEEEEEE
T ss_pred ------eEEEEEEEEEeCC-ceeEEeeccccCCCCEEEEEEEeeEEECC-ceEEEEEEeCCCCceEeeEEEEeEEEECcc
Confidence 8999999999885 689998742 2456899999999998765 4677776543 367999999999998753
No 27
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.22 E-value=2.1e-10 Score=110.04 Aligned_cols=134 Identities=15% Similarity=0.169 Sum_probs=106.2
Q ss_pred cEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEEecC---------CceEEeecCCccEEEEeeEEcCC-ceEEeccC
Q 042447 159 SVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGTG---------DDCISIVNGSSAIKMKRIFCGPG-HGISIGSL 228 (355)
Q Consensus 159 nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g---------DD~I~ik~g~~ni~i~n~~~~~~-~Gi~iGS~ 228 (355)
|++|++++|.+++. .++++..|++|+|+|++|.+. -|+|.+ ..++||+|+||++..+ .+++|++-
T Consensus 110 nv~i~giti~nsp~----~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~-~~s~nV~I~n~~i~~gDDciaiksg 184 (339)
T 2iq7_A 110 SSNIKGLNVLNTPV----QAFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDV-GSSTGVYISGANVKNQDDCLAINSG 184 (339)
T ss_dssp EEEEECCEEECCSS----CCEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEE-ESCEEEEEESCEEECSSCSEEESSE
T ss_pred cEEEEEEEEEeCCc----ceEEEeccCCEEEEEEEEECCccccccCCCCCcEEE-cCcceEEEEecEEecCCCEEEEcCC
Confidence 35566667766543 579999999999999999752 478888 4689999999999764 58999772
Q ss_pred CcccccceEEEEEEecceecCCceeEEEEEec-cCCeEEeeEEEEeEEEeecCcccEEEEcCC--CCceeCEEEEeEEEE
Q 042447 229 GKDNSMGIVTKVVLDTAYLRETANGLRIKTWQ-TSAVKISQIMYRNISGTTKSSKAMKFACSD--TVPCSDIVLSNVNLE 305 (355)
Q Consensus 229 g~~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~-~~~~~i~nItf~NI~g~~~~~~~i~i~~~~--~~~~~nI~~~nV~i~ 305 (355)
+||+|+||++... .|+.|.+-. .....++||+|+|++.... ..++.|.... .+.++||+|+||++.
T Consensus 185 ---------~nI~i~n~~~~~g-hGisiGSlg~~~~~~v~nV~v~n~~~~~~-~~girIkt~~g~~G~v~nI~~~ni~~~ 253 (339)
T 2iq7_A 185 ---------TNITFTGGTCSGG-HGLSIGSVGGRSDNTVKTVTISNSKIVNS-DNGVRIKTVSGATGSVSGVTYSGITLS 253 (339)
T ss_dssp ---------EEEEEESCEEESS-CCEEEEEESSSSCCEEEEEEEEEEEEESC-SEEEEEEEETTCCCEEEEEEEEEEEEE
T ss_pred ---------ccEEEEeEEEECC-ceEEECcCCcccCCCEEEEEEEeeEEECC-CcEEEEEEeCCCCeEEEEEEEEeEEcc
Confidence 8999999999986 589998731 2446899999999998764 5678776533 467999999999999
Q ss_pred eCC
Q 042447 306 KKD 308 (355)
Q Consensus 306 ~~~ 308 (355)
...
T Consensus 254 ~v~ 256 (339)
T 2iq7_A 254 NIA 256 (339)
T ss_dssp EES
T ss_pred Ccc
Confidence 754
No 28
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.22 E-value=3.1e-10 Score=108.78 Aligned_cols=131 Identities=17% Similarity=0.199 Sum_probs=102.7
Q ss_pred EEEEEEeCCCCCCCCceeeecCcccEEEEeeEEecC---------CceEEeecCCccEEEEeeEEcCC-ceEEeccCCcc
Q 042447 162 VYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGTG---------DDCISIVNGSSAIKMKRIFCGPG-HGISIGSLGKD 231 (355)
Q Consensus 162 i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g---------DD~I~ik~g~~ni~i~n~~~~~~-~Gi~iGS~g~~ 231 (355)
|++++|.+++. -++++. |++|+|+|++|.+. -|+|.+ ..++||+|+||++..+ .+++|++-
T Consensus 113 i~~i~i~nsp~----~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi-~~s~nV~I~n~~i~~gDDciaiksg--- 183 (336)
T 1nhc_A 113 FKGINIKNTPV----QAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDI-SESTGVYISGATVKNQDDCIAINSG--- 183 (336)
T ss_dssp EESCEEECCSS----CCEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEE-CSCEEEEEESCEEESSSEEEEESSE---
T ss_pred EEEEEEEeCCc----cEEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEe-cCCCeEEEEeCEEEcCCCEEEEeCC---
Confidence 34445555433 379999 99999999999763 478888 5689999999999754 58999772
Q ss_pred cccceEEEEEEecceecCCceeEEEEEec-cCCeEEeeEEEEeEEEeecCcccEEEEcCC--CCceeCEEEEeEEEEeCC
Q 042447 232 NSMGIVTKVVLDTAYLRETANGLRIKTWQ-TSAVKISQIMYRNISGTTKSSKAMKFACSD--TVPCSDIVLSNVNLEKKD 308 (355)
Q Consensus 232 ~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~-~~~~~i~nItf~NI~g~~~~~~~i~i~~~~--~~~~~nI~~~nV~i~~~~ 308 (355)
+||+|+||++... .|+.|.+.. .....++||+|+|++.... ..++.|.... .+.++||+|+||.+....
T Consensus 184 ------~nI~i~n~~~~~g-hGisiGS~g~~~~~~v~nV~v~n~~~~~t-~~girIkt~~g~~G~v~nI~~~ni~~~~v~ 255 (336)
T 1nhc_A 184 ------ESISFTGGTCSGG-HGLSIGSVGGRDDNTVKNVTISDSTVSNS-ANGVRIKTIYKETGDVSEITYSNIQLSGIT 255 (336)
T ss_dssp ------EEEEEESCEEESS-SEEEEEEESSSSCCEEEEEEEEEEEEESC-SEEEEEEEETTCCCEEEEEEEEEEEEEEES
T ss_pred ------eEEEEEeEEEECC-cCceEccCccccCCCEEEEEEEeeEEECC-CcEEEEEEECCCCCEEeeeEEeeEEeeccc
Confidence 8999999999876 589998742 1446899999999999764 5677776543 367999999999999865
Q ss_pred C
Q 042447 309 G 309 (355)
Q Consensus 309 g 309 (355)
.
T Consensus 256 ~ 256 (336)
T 1nhc_A 256 D 256 (336)
T ss_dssp S
T ss_pred c
Confidence 4
No 29
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.20 E-value=2.6e-10 Score=109.41 Aligned_cols=131 Identities=13% Similarity=0.196 Sum_probs=102.5
Q ss_pred EEEEEEeCCCCCCCCceeeecCcccEEEEeeEEecC---------CceEEeecCCccEEEEeeEEcCC-ceEEeccCCcc
Q 042447 162 VYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGTG---------DDCISIVNGSSAIKMKRIFCGPG-HGISIGSLGKD 231 (355)
Q Consensus 162 i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g---------DD~I~ik~g~~ni~i~n~~~~~~-~Gi~iGS~g~~ 231 (355)
|++++|.+++. .+|++..|++|+|++++|.+. -|+|.+ ..+++|+|+||++..+ .+++|++-
T Consensus 117 i~~i~i~nsp~----~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~-~~s~nV~I~n~~i~~gDDcIaiksg--- 188 (339)
T 1ia5_A 117 ISGLKIVNSPV----QVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDI-GTSTYVTISGATVYNQDDCVAVNSG--- 188 (339)
T ss_dssp EESCEEECCSS----CCEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEE-ESCEEEEEESCEEECSSCSEEESSE---
T ss_pred EEEEEEEcCCc----ceEEEecccCeEEeeEEEECCccccccCCCCCcEEe-cCCceEEEEeeEEEcCCCeEEEeCC---
Confidence 34445555432 589999999999999999752 578888 4689999999999754 58999772
Q ss_pred cccceEEEEEEecceecCCceeEEEEEec-cCCeEEeeEEEEeEEEeecCcccEEEEcCC--CCceeCEEEEeEEEEeCC
Q 042447 232 NSMGIVTKVVLDTAYLRETANGLRIKTWQ-TSAVKISQIMYRNISGTTKSSKAMKFACSD--TVPCSDIVLSNVNLEKKD 308 (355)
Q Consensus 232 ~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~-~~~~~i~nItf~NI~g~~~~~~~i~i~~~~--~~~~~nI~~~nV~i~~~~ 308 (355)
+||+|+||++.+. .|+.|.+.. .....++||+|+|++.... ..++.|.... .+.++||+|+||.++...
T Consensus 189 ------~nI~i~n~~~~~g-hGisiGS~g~~~~~~v~nV~v~n~~~~~t-~~girIKt~~g~~G~v~nI~~~ni~~~~v~ 260 (339)
T 1ia5_A 189 ------ENIYFSGGYCSGG-HGLSIGSVGGRSDNTVKNVTFVDSTIINS-DNGVRIKTNIDTTGSVSDVTYKDITLTSIA 260 (339)
T ss_dssp ------EEEEEESCEEESS-SCEEEEEECSSSCCEEEEEEEEEEEEESC-SEEEEEEEETTCCCEEEEEEEEEEEEEEES
T ss_pred ------eEEEEEeEEEECC-ceEEECcCCcccCCCEEEEEEEeeEEECC-CcEEEEEEeCCCCcEEEeeEEEEEEEECcc
Confidence 8999999999976 589997632 2446899999999998764 5678886533 367999999999999643
No 30
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.17 E-value=8e-10 Score=107.48 Aligned_cols=138 Identities=11% Similarity=0.144 Sum_probs=110.1
Q ss_pred cEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEEec-----CCceEEeecCCccEEEEeeEEcCC-ceEEeccCCccc
Q 042447 159 SVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGT-----GDDCISIVNGSSAIKMKRIFCGPG-HGISIGSLGKDN 232 (355)
Q Consensus 159 nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-----gDD~I~ik~g~~ni~i~n~~~~~~-~Gi~iGS~g~~~ 232 (355)
|++|+++++.+++. -++.+..|++++|+|++|.+ .-|+|.+ ..|++|+|+||++..+ .+|+|++.+.
T Consensus 161 nv~I~~iti~nsp~----~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~-~~s~nV~I~n~~i~~gDDcIaiks~~~-- 233 (376)
T 1bhe_A 161 NFTLYNVSLINSPN----FHVVFSDGDGFTAWKTTIKTPSTARNTDGIDP-MSSKNITIAYSNIATGDDNVAIKAYKG-- 233 (376)
T ss_dssp EEEEEEEEEECCSS----CSEEEESCEEEEEEEEEEECCTTCSSCCSEEE-ESCEEEEEESCEEECSSCSEEEEECTT--
T ss_pred EEEEEeEEEECCCc----EEEEEeCCCcEEEEeEEEECCCCCCCCceEee-cCCceEEEEeCEEecCCCeEEEcccCC--
Confidence 67889999988543 36889899999999999976 4688998 5689999999999765 5899987431
Q ss_pred ccceEEEEEEecceecCCceeEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEEcC--CCCceeCEEEEeEEEEeCCC
Q 042447 233 SMGIVTKVVLDTAYLRETANGLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFACS--DTVPCSDIVLSNVNLEKKDG 309 (355)
Q Consensus 233 ~~~~v~nV~i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~~~--~~~~~~nI~~~nV~i~~~~g 309 (355)
....+||+|+||++.. ..|+.|.+... .++||+|+|++.... ..++.|... ..+.++||+|+||.|.....
T Consensus 234 -~~~s~nI~I~n~~~~~-ghGisiGSe~~---~v~nV~v~n~~~~~t-~~GirIKt~~g~~G~v~ni~f~ni~~~~v~~ 306 (376)
T 1bhe_A 234 -RAETRNISILHNDFGT-GHGMSIGSETM---GVYNVTVDDLKMNGT-TNGLRIKSDKSAAGVVNGVRYSNVVMKNVAK 306 (376)
T ss_dssp -SCCEEEEEEEEEEECS-SSCEEEEEEES---SEEEEEEEEEEEESC-SEEEEEECCTTTCCEEEEEEEEEEEEESCSE
T ss_pred -CCCceEEEEEeeEEEc-cccEEeccCCc---cEeeEEEEeeEEeCC-CcEEEEEEecCCCceEeeEEEEeEEEeCCCc
Confidence 2357999999999986 57898876432 699999999998775 567777753 45679999999999997543
No 31
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.17 E-value=5.8e-10 Score=107.43 Aligned_cols=120 Identities=14% Similarity=0.213 Sum_probs=96.8
Q ss_pred ceeeecCcccEEEEeeEEecC-----------------CceEEeecCCccEEEEeeEEcCC-ceEEeccCCcccccceEE
Q 042447 177 DGIHITESTNVVLQDCKIGTG-----------------DDCISIVNGSSAIKMKRIFCGPG-HGISIGSLGKDNSMGIVT 238 (355)
Q Consensus 177 DGi~~~~s~nv~I~n~~i~~g-----------------DD~I~ik~g~~ni~i~n~~~~~~-~Gi~iGS~g~~~~~~~v~ 238 (355)
.++++..|++|+|+|++|.+. -|+|.+ ..++||+|+||++..+ .+|+|++- +
T Consensus 128 ~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~-~~s~nV~I~n~~i~~gDDcIaiksg---------~ 197 (349)
T 1hg8_A 128 HCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDI-SSSDHVTLDNNHVYNQDDCVAVTSG---------T 197 (349)
T ss_dssp EEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEE-ESCEEEEEEEEEEECSSCSEEESSE---------E
T ss_pred ceEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEE-ccccEEEEEeeEEecCCCeEEeeCC---------e
Confidence 589999999999999999751 467888 4689999999999654 58999771 8
Q ss_pred EEEEecceecCCceeEEEEEe-ccCCeEEeeEEEEeEEEeecCcccEEEEcCC--CCceeCEEEEeEEEEeCC
Q 042447 239 KVVLDTAYLRETANGLRIKTW-QTSAVKISQIMYRNISGTTKSSKAMKFACSD--TVPCSDIVLSNVNLEKKD 308 (355)
Q Consensus 239 nV~i~n~~~~~~~~gi~Ik~~-~~~~~~i~nItf~NI~g~~~~~~~i~i~~~~--~~~~~nI~~~nV~i~~~~ 308 (355)
||+|+||++.+. .|+.|.+- ......++||+|+|++.... ..++.|.... .+.++||+|+||.|....
T Consensus 198 nI~i~n~~~~~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~~-~~GirIKt~~g~~G~v~nI~~~ni~~~~v~ 268 (349)
T 1hg8_A 198 NIVVSNMYCSGG-HGLSIGSVGGKSDNVVDGVQFLSSQVVNS-QNGCRIKSNSGATGTINNVTYQNIALTNIS 268 (349)
T ss_dssp EEEEEEEEEESS-CCEEEEEESSSSCCEEEEEEEEEEEEEEE-EEEEEEEEETTCCEEEEEEEEEEEEEEEEE
T ss_pred EEEEEeEEEeCC-cceEEccccccccCCEEEEEEEEEEEECC-CcEEEEEecCCCCccccceEEEEEEEEccc
Confidence 999999999875 68999774 12446899999999998774 5678876533 367999999999998753
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.17 E-value=1.4e-09 Score=105.03 Aligned_cols=202 Identities=13% Similarity=0.207 Sum_probs=126.6
Q ss_pred CceEEEeeec----CCCCCCCcchHHHHHHHHHHhhc-------CCCcEEEEcCCeEEEE-eeeeeeccccccEEEEEce
Q 042447 37 GKVLVNVDSF----GAAGDGVSDDTQAFLNAWNTACS-------TPKSVFLVPAGRHYLV-SATRFKGPCADKLVIQIDG 104 (355)
Q Consensus 37 ~~~~~nV~dy----GA~gDG~tDdT~Aiq~Ai~~a~~-------~gg~~V~iP~G~tY~i-~~~~l~~p~~~~~~l~~~g 104 (355)
...++||++| +|+||+.+|++++|+++|++..+ +.|.+|+||+|. |.+ +++.+.. +.++|...+
T Consensus 11 ~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G~-Y~l~g~ivIdk---p~LtL~G~~ 86 (410)
T 2inu_A 11 SPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGD-YDLHTQVVVDV---SYLTIAGFG 86 (410)
T ss_dssp -CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSEE-EEECSCEEECC---TTEEEECSC
T ss_pred cCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCCe-eccCCcEEEec---CcEEEEecC
Confidence 3579999999 89999999999999999998643 458899999996 874 6666653 237777643
Q ss_pred --E----EeecCCCCCC----CccC---------cceEEEEEe-----ccCeEEecceEEECc-----CCccccCCC---
Q 042447 105 --T----IVAPAEPDNW----DPKL---------ARIWLDFSK-----LNGVLFQGSGVIDGS-----GSKWWASSC--- 152 (355)
Q Consensus 105 --~----l~~~~~~~~~----~~~~---------~~~~i~~~~-----~~ni~I~G~G~IdG~-----G~~~~~~~~--- 152 (355)
. |.+-.....| +... ....|.+.. +++|+|.| =+|+|- |........
T Consensus 87 ~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-v~I~G~~~~~~G~s~~~~dAGI~ 165 (410)
T 2inu_A 87 HGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-FCLDGVGFTPGKNSYHNGKTGIE 165 (410)
T ss_dssp CCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES-CEEECCCCSSSTTSCCCSCEEEE
T ss_pred CCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECC-EEEECCEeecCCCCcccCceeEE
Confidence 2 2211011132 2110 011222221 24455554 344444 322111100
Q ss_pred CCCCcccEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcC---CceEEeccCC
Q 042447 153 KKNKSESVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGP---GHGISIGSLG 229 (355)
Q Consensus 153 ~~~~~~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~---~~Gi~iGS~g 229 (355)
-....++++|+++.|... .-||.+..+++++|++++|.....||-+...+....|+++.+.. |+||.+..
T Consensus 166 v~~~~d~~~I~nn~i~~~-----~fGI~l~~a~~~~I~~N~I~e~GNgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~n-- 238 (410)
T 2inu_A 166 VASDNDSFHITGMGFVYL-----EHALIVRGADALRVNDNMIAECGNCVELTGAGQATIVSGNHMGAGPDGVTLLAEN-- 238 (410)
T ss_dssp ECSCEESCEEESCEEESC-----SEEEEETTEESCEEESCEEESSSEEEEECSCEESCEEESCEEECCTTSEEEEEES--
T ss_pred EeccCCeEEEECCEEecc-----cEEEEEccCCCcEEECCEEEecCCceeeccccccceEecceeeecCCCCEEEEEe--
Confidence 011236777888888753 35899999999999999998777888887657778888888754 34566522
Q ss_pred cccccceEEEEEEeccee-cCCceeEEEE
Q 042447 230 KDNSMGIVTKVVLDTAYL-RETANGLRIK 257 (355)
Q Consensus 230 ~~~~~~~v~nV~i~n~~~-~~~~~gi~Ik 257 (355)
..+..|+++.+ ....+|+++.
T Consensus 239 -------s~~~~I~~N~i~~~~R~gIh~m 260 (410)
T 2inu_A 239 -------HEGLLVTGNNLFPRGRSLIEFT 260 (410)
T ss_dssp -------EESCEEESCEECSCSSEEEEEE
T ss_pred -------CCCCEEECCCcccCcceEEEEE
Confidence 34556777754 6677888775
No 33
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.04 E-value=1.4e-09 Score=108.05 Aligned_cols=129 Identities=15% Similarity=0.108 Sum_probs=99.7
Q ss_pred eeeecCcccEEEEeeEEecC-------------CceEEeecCCccEEEEeeEEcCCc-eEEeccCCcccccceEEEEEEe
Q 042447 178 GIHITESTNVVLQDCKIGTG-------------DDCISIVNGSSAIKMKRIFCGPGH-GISIGSLGKDNSMGIVTKVVLD 243 (355)
Q Consensus 178 Gi~~~~s~nv~I~n~~i~~g-------------DD~I~ik~g~~ni~i~n~~~~~~~-Gi~iGS~g~~~~~~~v~nV~i~ 243 (355)
.+.+..|+|++|+++++.+. .|++.+ .++||+|+||++..++ ++ |+. ....++||+|+
T Consensus 134 ~i~~~~~~Nv~I~gIti~n~w~ih~s~~V~i~NtDGi~i--~s~nV~I~n~~I~~gddgi--Gs~----~~~~~~NV~V~ 205 (464)
T 1h80_A 134 VFKLGDVRNYKISNFTIDDNKTIFASILVDVTERNGRLH--WSRNGIIERIKQNNALFGY--GLI----QTYGADNILFR 205 (464)
T ss_dssp EEEECSEEEEEEEEEEEECCSCBSCSEEECEEEETTEEE--EEEEEEEEEEEEESCCTTC--EEE----EESEEEEEEEE
T ss_pred EEEEEeeccEEEeeeEEeccceEeeceeeeeecCCCcee--eccCEEEeceEEecCCCeE--Eec----ccCCEeEEEEE
Confidence 46778899999999998541 244444 5799999999998765 45 221 23468999999
Q ss_pred cceecCCceeEEEEEe-----ccCCeEEeeEEEEeEEEeecCcccEEEEcCCCCceeCEEEEeEEEEeCCCc---ceeee
Q 042447 244 TAYLRETANGLRIKTW-----QTSAVKISQIMYRNISGTTKSSKAMKFACSDTVPCSDIVLSNVNLEKKDGT---VETYC 315 (355)
Q Consensus 244 n~~~~~~~~gi~Ik~~-----~~~~~~i~nItf~NI~g~~~~~~~i~i~~~~~~~~~nI~~~nV~i~~~~g~---~~~~c 315 (355)
||++.+ ..|++||+| ....+.++||+|+|+++... ..++.|. ......++|+|+||+++...-. ...+|
T Consensus 206 n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv-~~~I~I~-p~~~~isnItfeNI~~t~~~~aI~i~q~y~ 282 (464)
T 1h80_A 206 NLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRCSKG-LAAVMFG-PHFMKNGDVQVTNVSSVSCGSAVRSDSGFV 282 (464)
T ss_dssp EEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESS-SEEEEEE-CTTCBCCCEEEEEEEEESSSCSEEECCCCC
T ss_pred eeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEEECC-ceeEEEe-CCCceEeEEEEEEEEEEccceeEEEecCcc
Confidence 999999 899999998 66677999999999999876 4568886 3335689999999999985433 24567
Q ss_pred ee
Q 042447 316 NS 317 (355)
Q Consensus 316 ~n 317 (355)
.+
T Consensus 283 ~~ 284 (464)
T 1h80_A 283 EL 284 (464)
T ss_dssp EE
T ss_pred cc
Confidence 66
No 34
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.01 E-value=1.9e-09 Score=111.12 Aligned_cols=151 Identities=20% Similarity=0.292 Sum_probs=89.0
Q ss_pred ceEEEeeecCCCCCCCcchHHHHHHHHHHhhcCCCcEEEEcCCeEEEEee-eeeeccccccEEEEEce--EEeecCCCCC
Q 042447 38 KVLVNVDSFGAAGDGVSDDTQAFLNAWNTACSTPKSVFLVPAGRHYLVSA-TRFKGPCADKLVIQIDG--TIVAPAEPDN 114 (355)
Q Consensus 38 ~~~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~gg~~V~iP~G~tY~i~~-~~l~~p~~~~~~l~~~g--~l~~~~~~~~ 114 (355)
..++||+||||+|||++|||+|||+||+++ . ++++||||+|. |++.. +.+ | +++.|..++ +|.+.. ..
T Consensus 398 ~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa-~-~g~~v~~P~G~-Y~vt~Ti~i--p--~~~~ivG~~~~~I~~~G--~~ 468 (758)
T 3eqn_A 398 SDFVSVRSQGAKGDGHTDDTQAIKNVFAKY-A-GCKIIFFDAGT-YIVTDTIQI--P--AGTQIVGEVWSVIMGTG--SK 468 (758)
T ss_dssp GGEEETTTTTCCCEEEEECHHHHHHHHHHH-T-TTSEEECCSEE-EEESSCEEE--C--TTCEEECCSSEEEEECS--GG
T ss_pred cceEEeeeccccCCCCchhHHHHHHHHHHh-c-CCCEEEECCCE-eEECCeEEc--C--CCCEEEecccceEecCC--cc
Confidence 368999999999999999999999999954 3 57899999996 98875 444 3 466666553 455432 22
Q ss_pred CC-ccCcceEEEEE---eccCeEEecceEEECcCC------ccccCCCCCCCcccEEEEEEEEeCCCCC---------CC
Q 042447 115 WD-PKLARIWLDFS---KLNGVLFQGSGVIDGSGS------KWWASSCKKNKSESVRVYQVLVSAPEDS---------PN 175 (355)
Q Consensus 115 ~~-~~~~~~~i~~~---~~~ni~I~G~G~IdG~G~------~~~~~~~~~~~~~nv~i~~v~I~~~~~~---------~n 175 (355)
|. ...++.++... ..-.+.|.| =+++-.|. .-|...........+.+.|+.++-.+.. +.
T Consensus 469 F~d~~~P~pvv~VG~~gd~G~veisd-l~~~t~g~~~gail~ewn~~~~~~~~~~~~mwDvh~RiGG~~gt~l~~~~C~~ 547 (758)
T 3eqn_A 469 FTDYNNPQPVIQVGAPGSSGVVEITD-MIFTTRGPAAGAIIVEWNVHDPSGQQAAAGAWDTHLIIGGTAQSGLQVGQCPT 547 (758)
T ss_dssp GCCTTSCEEEEEESCTTCBSCEEEES-CEEEECSCCTTEEEEEECCBCCTTCTTCEEEESCBEEESSSTTSSCSTTTCCT
T ss_pred ccCCCCCeeeEEeCCCCCCCeEEEEe-EEEEecCCCCCcEEEEEcCCCCCCCCCCeeEEEEEEEeccccCcccccccCCC
Confidence 22 22345666552 223455655 23332221 1122211111135788888888843210 00
Q ss_pred C-----------ceeeecCcccEEEEeeEEecCC
Q 042447 176 T-----------DGIHITESTNVVLQDCKIGTGD 198 (355)
Q Consensus 176 ~-----------DGi~~~~s~nv~I~n~~i~~gD 198 (355)
+ -.+++..+....++|+.++.-|
T Consensus 548 ~~~~~~~C~aa~~~lhvt~~ss~y~en~W~W~AD 581 (758)
T 3eqn_A 548 SGAGGNNCFADFLGLHLTSGSSAYLEGMWVWLAD 581 (758)
T ss_dssp TCTTGGGGEEEEEEEEECTTCCEEEESCEEEECS
T ss_pred CCCCCccchhheeEEEEecCCCeEEEeeEEEecc
Confidence 0 0355554455677887776543
No 35
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=98.73 E-value=6.6e-07 Score=90.82 Aligned_cols=151 Identities=15% Similarity=0.148 Sum_probs=103.4
Q ss_pred ceEEEEEeccCeEEecceEEECcCCcc------ccCCCCCC------CcccEEEEEEEEeCCCCCCCCceeeecCcccEE
Q 042447 121 RIWLDFSKLNGVLFQGSGVIDGSGSKW------WASSCKKN------KSESVRVYQVLVSAPEDSPNTDGIHITESTNVV 188 (355)
Q Consensus 121 ~~~i~~~~~~ni~I~G~G~IdG~G~~~------~~~~~~~~------~~~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~ 188 (355)
..++.|.+++++.|+|--+.+...... ........ .++||+|++++|++..+ |+|-+.+|+||+
T Consensus 134 P~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGD----DcIaIksseNI~ 209 (609)
T 3gq8_A 134 ESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGD----DGITTHHSQYIN 209 (609)
T ss_dssp TCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSS----CSEEECSCEEEE
T ss_pred ccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccceeEEEEeeEEEecCC----CEEEecCCeeEE
Confidence 356778888888888743333322100 00000111 26999999999976444 899999999999
Q ss_pred EEeeEEecC-----CceEEeecCCccEEEEeeEEcC-CceEEeccCCcccccceEEEEEEecceecCCc--eeEEEEEec
Q 042447 189 LQDCKIGTG-----DDCISIVNGSSAIKMKRIFCGP-GHGISIGSLGKDNSMGIVTKVVLDTAYLRETA--NGLRIKTWQ 260 (355)
Q Consensus 189 I~n~~i~~g-----DD~I~ik~g~~ni~i~n~~~~~-~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~--~gi~Ik~~~ 260 (355)
|+||++... .-+|.|.++.+||+++||++.. ..|+.|.+.+ ..+.++||.|+|+...+.- +.++.-.+.
T Consensus 210 I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~---~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~ 286 (609)
T 3gq8_A 210 ILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DAPAAYNISINGHMSVEDVRSYNFRHIGHH 286 (609)
T ss_dssp EESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECT---TSCCCEEEEEEEEEEESCSEEEEEEETTSC
T ss_pred EEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecC---CCCccccEEEECCEeecCceEecceEEccc
Confidence 999999543 5789998888999999999976 4699998764 2356899999998654442 355542221
Q ss_pred ----cCCeEEeeEEEEeEEEee
Q 042447 261 ----TSAVKISQIMYRNISGTT 278 (355)
Q Consensus 261 ----~~~~~i~nItf~NI~g~~ 278 (355)
+......||+++|+....
T Consensus 287 ~a~dp~s~~a~nV~l~n~~~~~ 308 (609)
T 3gq8_A 287 AATAPQSVSAKNIVASNLVSIR 308 (609)
T ss_dssp STTSCCCSSCEEEEEEEEEEES
T ss_pred cCCCCCcceecceEeecceEEe
Confidence 233467888888887643
No 36
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=98.72 E-value=6.1e-07 Score=92.70 Aligned_cols=150 Identities=15% Similarity=0.150 Sum_probs=101.8
Q ss_pred ceEEEEEeccCeEEecceEEECcCCcc------ccCCCCCC------CcccEEEEEEEEeCCCCCCCCceeeecCcccEE
Q 042447 121 RIWLDFSKLNGVLFQGSGVIDGSGSKW------WASSCKKN------KSESVRVYQVLVSAPEDSPNTDGIHITESTNVV 188 (355)
Q Consensus 121 ~~~i~~~~~~ni~I~G~G~IdG~G~~~------~~~~~~~~------~~~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~ 188 (355)
..++.|.+++|+.|+|--+.+...... ........ .++||+|++++|++..+ |+|-+.+|+||+
T Consensus 134 P~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~ntGD----DcIAIksSeNI~ 209 (772)
T 3gqn_A 134 ESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGD----DGITTHHSQYIN 209 (772)
T ss_dssp TCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSS----CSEEECSCEEEE
T ss_pred ccEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEecCc----CeEEecCCceEE
Confidence 356778888888888743333322100 00000111 26999999999976444 899999999999
Q ss_pred EEeeEEecC-----CceEEeecCCccEEEEeeEEcCC-ceEEeccCCcccccceEEEEEEecceec-CCc-eeEEEEEec
Q 042447 189 LQDCKIGTG-----DDCISIVNGSSAIKMKRIFCGPG-HGISIGSLGKDNSMGIVTKVVLDTAYLR-ETA-NGLRIKTWQ 260 (355)
Q Consensus 189 I~n~~i~~g-----DD~I~ik~g~~ni~i~n~~~~~~-~Gi~iGS~g~~~~~~~v~nV~i~n~~~~-~~~-~gi~Ik~~~ 260 (355)
|+||++... .-+|.|.++++||+++||++... .|+.|.+.+ ..+.++||+|.++... +.. +.++.-.+.
T Consensus 210 I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~---~gg~v~NV~I~gnis~~dvrsynir~iG~h 286 (772)
T 3gqn_A 210 ILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DAPAAYNISINGHMSVEDVRSYNFRHIGHH 286 (772)
T ss_dssp EESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCT---TSCCCEEEEEEEEEEESCSEEEEECCTTSC
T ss_pred EEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeC---CCCccccEEEECCEEeccCeEecceEEccc
Confidence 999999443 57899988889999999999764 699998764 3456899999976644 431 344432211
Q ss_pred ----cCCeEEeeEEEEeEEEe
Q 042447 261 ----TSAVKISQIMYRNISGT 277 (355)
Q Consensus 261 ----~~~~~i~nItf~NI~g~ 277 (355)
+......||+++|+...
T Consensus 287 ~a~dp~s~~a~nV~l~n~~~~ 307 (772)
T 3gqn_A 287 AATAPQSVSAKNIVASNLVSI 307 (772)
T ss_dssp SSSSCCCSSCEEEEEEEEEEE
T ss_pred cCCCCCCccCccEEeecceEE
Confidence 22336788888888754
No 37
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=98.70 E-value=2.6e-08 Score=100.70 Aligned_cols=127 Identities=8% Similarity=-0.001 Sum_probs=92.6
Q ss_pred cEEEEEEEEeCC-CCCCCCceeee---cCcccEEEEeeE----Eec--CCceEEeecCCccEEEEeeEEcCC-ceEEe-c
Q 042447 159 SVRVYQVLVSAP-EDSPNTDGIHI---TESTNVVLQDCK----IGT--GDDCISIVNGSSAIKMKRIFCGPG-HGISI-G 226 (355)
Q Consensus 159 nv~i~~v~I~~~-~~~~n~DGi~~---~~s~nv~I~n~~----i~~--gDD~I~ik~g~~ni~i~n~~~~~~-~Gi~i-G 226 (355)
+.+|+++++.++ +.+ .+++ ..|+||+|+||+ |.+ .-|+| |+|+||++..+ .+|+| +
T Consensus 184 ~c~I~GITi~NSDP~w----~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI--------V~I~nc~I~tGDDCIAI~K 251 (600)
T 2x6w_A 184 NCSVTGITFQNGDVTW----AITLGWNGYGSNCYVRKCRFINLVNSSVNADHS--------TVYVNCPYSGVESCYFSMS 251 (600)
T ss_dssp EEEEESCEEESCCCSC----SEEECBTTBEEEEEEESCEEECCCCCSSCCCEE--------EEEECSSSEEEESCEEECC
T ss_pred eeEEeCeEEECCCCcc----EEEeCCCCCcccEEEeCeEEcceEecCCCCCEE--------EEEEeeEEecCCcEEEEec
Confidence 344777788775 443 4778 889999999999 765 34666 89999998754 47888 5
Q ss_pred cCCcc------------------cccceEEEEEEecceecCCceeEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEEc
Q 042447 227 SLGKD------------------NSMGIVTKVVLDTAYLRETANGLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFAC 288 (355)
Q Consensus 227 S~g~~------------------~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~~ 288 (355)
+-... ...+.|+||+|+| +||++.+.++.++||+|+||++.... .++.+..
T Consensus 252 SGs~~ni~~e~~~~GHgGISIGSe~~ggV~NV~V~N----------rIKt~~G~GG~V~NItfeNI~m~nV~-~~I~i~q 320 (600)
T 2x6w_A 252 SSFARNIACSVQLHQHDTFYRGSTVNGYCRGAYVVM----------HAAEAAGAGSYAYNMQVENNIAVIYG-QFVILGS 320 (600)
T ss_dssp CTTHHHHEEEEEECSSSEEEESCEEEEESEEEEEEE----------CGGGCTTTCSEEEEEEEESCEEEESS-EEEEEEE
T ss_pred CCCcCCeEEEEEcCCCCcEEecccccCcEEEEEEEE----------EEEeecCCCceEEEEEEEEEEEEccc-eEEEeCC
Confidence 43211 0135678888888 56666677789999999999998874 6666632
Q ss_pred ----CCCCceeCEEEEeEEEEeCC
Q 042447 289 ----SDTVPCSDIVLSNVNLEKKD 308 (355)
Q Consensus 289 ----~~~~~~~nI~~~nV~i~~~~ 308 (355)
....+++||+|+||+.+...
T Consensus 321 ~~~~~s~~~IsnItfkNItgTsas 344 (600)
T 2x6w_A 321 DVTATVSGHLNDVIVSGNIVSIGE 344 (600)
T ss_dssp CBCSSCBCEEEEEEEESCEEEECS
T ss_pred CCCCCCCceEEEEEEEeEEEEecc
Confidence 23457999999999998743
No 38
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.54 E-value=4e-06 Score=80.52 Aligned_cols=136 Identities=17% Similarity=0.215 Sum_probs=93.0
Q ss_pred cCeEEecce---EEECcCCccccCCCCCCCcccEEEEEEEEeCCCC-----------CCCCceeeecCcccEEEEeeEEe
Q 042447 130 NGVLFQGSG---VIDGSGSKWWASSCKKNKSESVRVYQVLVSAPED-----------SPNTDGIHITESTNVVLQDCKIG 195 (355)
Q Consensus 130 ~ni~I~G~G---~IdG~G~~~~~~~~~~~~~~nv~i~~v~I~~~~~-----------~~n~DGi~~~~s~nv~I~n~~i~ 195 (355)
.+.+|.|.| .|.|.|.... ..+||.|+|++|+.+.+ ..+.|+|.+..++||+|++|.|.
T Consensus 80 sn~TI~G~G~~~~i~g~gl~i~-------~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s 152 (355)
T 1pcl_A 80 SNTTIIGVGSNGKFTNGSLVIK-------GVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTIS 152 (355)
T ss_pred CCeEEEEecCCeEEecCEEEEe-------cCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEe
Confidence 567777643 5665554332 23899999999986421 13579999999999999999997
Q ss_pred cC------------------CceEEeecCCccEEEEeeEEcC-CceEEeccCCccc-ccceEEEEEEecceecCCc-eeE
Q 042447 196 TG------------------DDCISIVNGSSAIKMKRIFCGP-GHGISIGSLGKDN-SMGIVTKVVLDTAYLRETA-NGL 254 (355)
Q Consensus 196 ~g------------------DD~I~ik~g~~ni~i~n~~~~~-~~Gi~iGS~g~~~-~~~~v~nV~i~n~~~~~~~-~gi 254 (355)
.+ |.++.++.++++|+|+||++.. ..++-+|+.-.+. ......+|+|.++.+.++. +.-
T Consensus 153 ~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~P 232 (355)
T 1pcl_A 153 DGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAP 232 (355)
T ss_pred ccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCC
Confidence 53 6677888899999999999965 3366677642211 1112357999999998764 333
Q ss_pred EEEEeccCCeEEeeEEEEeEE
Q 042447 255 RIKTWQTSAVKISQIMYRNIS 275 (355)
Q Consensus 255 ~Ik~~~~~~~~i~nItf~NI~ 275 (355)
++. ...+++-|-.|.|+.
T Consensus 233 rvR---~G~~Hv~NN~~~~~~ 250 (355)
T 1pcl_A 233 RVR---FGSIHAYNNVYLGDV 250 (355)
T ss_pred cee---cceEEEEcceEEccc
Confidence 443 123566676776553
No 39
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=98.51 E-value=1.2e-06 Score=84.63 Aligned_cols=119 Identities=9% Similarity=0.126 Sum_probs=86.1
Q ss_pred CCCceeeecC-cccEEEEeeEEecCCceEEee-------cCCccEEEEeeEEcC--CceEEeccCCcccccceEEEEEEe
Q 042447 174 PNTDGIHITE-STNVVLQDCKIGTGDDCISIV-------NGSSAIKMKRIFCGP--GHGISIGSLGKDNSMGIVTKVVLD 243 (355)
Q Consensus 174 ~n~DGi~~~~-s~nv~I~n~~i~~gDD~I~ik-------~g~~ni~i~n~~~~~--~~Gi~iGS~g~~~~~~~v~nV~i~ 243 (355)
.+.|||++.. |++++|+|+.+...++|+.+. ..+.+++|+++.++. ++|+.+. .+++++|+
T Consensus 193 ~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~---------~~~~v~i~ 263 (377)
T 2pyg_A 193 NDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLK---------MTSDITLQ 263 (377)
T ss_dssp CSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEE---------EEEEEEEE
T ss_pred cccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEec---------cccCeEEE
Confidence 4579999877 999999999999999998884 568899999999875 5677662 36899999
Q ss_pred cceecCC-ceeEEEEEeccCCeEEeeEEEEeEEEeecC----cccEEEEcCCCC--------ceeCEEEEeEEEEeCC
Q 042447 244 TAYLRET-ANGLRIKTWQTSAVKISQIMYRNISGTTKS----SKAMKFACSDTV--------PCSDIVLSNVNLEKKD 308 (355)
Q Consensus 244 n~~~~~~-~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~----~~~i~i~~~~~~--------~~~nI~~~nV~i~~~~ 308 (355)
++++.++ ..|++|+. .++++|+|.+..... ...+.++..... ..++++|++..+....
T Consensus 264 ~N~i~~~~~~GI~i~g-------~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~N~i~g~~ 334 (377)
T 2pyg_A 264 NADIHGNGSSGVRVYG-------AQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGASGTYYTTLNTRIEGNTISGSA 334 (377)
T ss_dssp SCEEESCSSCSEEEEE-------EEEEEEESCEEESCCSSSSCCSEEEECEEETTSSSCEEECCBCCEEESCEEECCS
T ss_pred CCEEECCCCceEEEec-------CCCcEEECcEEECCcccccccceEEEEecCCCccceeeeeccCeEEECCEEECcC
Confidence 9999998 89999983 556666665554321 112333221111 1367888888887743
No 40
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.28 E-value=1.5e-05 Score=76.24 Aligned_cols=113 Identities=13% Similarity=0.134 Sum_probs=78.8
Q ss_pred ccEEEEEEEEeCCC------------------CCCCCceeeecCcccEEEEeeEEecCCceE-EeecCCccEEEEeeEEc
Q 042447 158 ESVRVYQVLVSAPE------------------DSPNTDGIHITESTNVVLQDCKIGTGDDCI-SIVNGSSAIKMKRIFCG 218 (355)
Q Consensus 158 ~nv~i~~v~I~~~~------------------~~~n~DGi~~~~s~nv~I~n~~i~~gDD~I-~ik~g~~ni~i~n~~~~ 218 (355)
+||.|++++|+... .....|||.+..+++|+|++|.|..+.|++ .++.++++|+|+||++.
T Consensus 114 ~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f~ 193 (346)
T 1pxz_A 114 SHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFF 193 (346)
T ss_dssp EEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEESSCEEEEEESCEEE
T ss_pred CCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeeccCcceEEEEeeEEe
Confidence 78888888887531 135689999999999999999998766665 68788999999999996
Q ss_pred C-CceEEeccCCcccccceEEEEEEeccee-cCCce-eEEEEEeccCCeEEeeEEEEeE
Q 042447 219 P-GHGISIGSLGKDNSMGIVTKVVLDTAYL-RETAN-GLRIKTWQTSAVKISQIMYRNI 274 (355)
Q Consensus 219 ~-~~Gi~iGS~g~~~~~~~v~nV~i~n~~~-~~~~~-gi~Ik~~~~~~~~i~nItf~NI 274 (355)
. ..++-+|+.-.. ......+|++.++.+ .+... ..+++ .....+.|-.|.|.
T Consensus 194 ~H~k~~l~G~sd~~-~~d~~~~vT~~~N~f~~~~~~R~Pr~r---~g~~hv~NN~~~~~ 248 (346)
T 1pxz_A 194 NHHKVMLLGHDDTY-DDDKSMKVTVAFNQFGPNAGQRMPRAR---YGLVHVANNNYDPW 248 (346)
T ss_dssp SEEEEEEESCCSSC-GGGGGCEEEEESCEECSSEEECTTEEE---SSEEEEESCEECCC
T ss_pred cCCceeEECCCCcc-ccCCceEEEEEeeEEeCCccccCccEe---cceEEEEeeEEEcc
Confidence 4 237778775222 112235889999998 66532 23343 23345555555553
No 41
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=98.27 E-value=6.8e-06 Score=80.29 Aligned_cols=43 Identities=23% Similarity=0.396 Sum_probs=27.8
Q ss_pred eEEEeeecCC-CCCCCcchHH-HHHHHHHHhhcCCCcEEEEcCCeEEE
Q 042447 39 VLVNVDSFGA-AGDGVSDDTQ-AFLNAWNTACSTPKSVFLVPAGRHYL 84 (355)
Q Consensus 39 ~~~nV~dyGA-~gDG~tDdT~-Aiq~Ai~~a~~~gg~~V~iP~G~tY~ 84 (355)
.++.|..-|- .++|.+-+.| .||+|++.| + .|.+|+|.+|+ |.
T Consensus 15 ~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a-~-pGdtI~l~~Gt-Y~ 59 (400)
T 1ru4_A 15 RIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV-N-PGELILLKPGT-YT 59 (400)
T ss_dssp CEEEECTTCCTTCCSSSTTSCBCHHHHHHHC-C-TTCEEEECSEE-EE
T ss_pred cEEEEcCCCCCCCCCccccCCccHHHHHhhC-C-CCCEEEECCCe-Ec
Confidence 4677754443 2344232222 699999964 3 47899999995 87
No 42
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.25 E-value=2.7e-05 Score=74.20 Aligned_cols=113 Identities=16% Similarity=0.160 Sum_probs=79.3
Q ss_pred ccEEEEEEEEeCCCC--C-----CCCceeeecCcccEEEEeeEEec-CCceEEeecCCccEEEEeeEEcC-CceEEeccC
Q 042447 158 ESVRVYQVLVSAPED--S-----PNTDGIHITESTNVVLQDCKIGT-GDDCISIVNGSSAIKMKRIFCGP-GHGISIGSL 228 (355)
Q Consensus 158 ~nv~i~~v~I~~~~~--~-----~n~DGi~~~~s~nv~I~n~~i~~-gDD~I~ik~g~~ni~i~n~~~~~-~~Gi~iGS~ 228 (355)
+||.|++++|+.... . ...|+|.+..++||+|++|.|.. .|.++.++.++.+|+|+||++.. ..++-+|+.
T Consensus 91 ~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~s 170 (340)
T 3zsc_A 91 QNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSS 170 (340)
T ss_dssp EEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEECCC
T ss_pred ceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeCcC
Confidence 899999999987521 1 26799999999999999999965 57779998899999999999964 346667763
Q ss_pred Cccc--ccceEEEEEEecceecCCc-eeEEEEEeccCCeEEeeEEEEe
Q 042447 229 GKDN--SMGIVTKVVLDTAYLRETA-NGLRIKTWQTSAVKISQIMYRN 273 (355)
Q Consensus 229 g~~~--~~~~v~nV~i~n~~~~~~~-~gi~Ik~~~~~~~~i~nItf~N 273 (355)
-... ....-.+|+|.++.+.++. +.-+++ ....++-|-.|.|
T Consensus 171 d~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r---~G~~Hv~NN~~~n 215 (340)
T 3zsc_A 171 DKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIR---FGMAHVFNNFYSM 215 (340)
T ss_dssp TTSCHHHHHHSCEEEEESCEEESCCBCTTEEE---SSEEEEESCEEEC
T ss_pred CCCccccccCCcEEEEECeEecCCCCCCCccc---CCeEEEEccEEEC
Confidence 1110 0111247889888887764 223443 2234566666666
No 43
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.24 E-value=1e-05 Score=76.99 Aligned_cols=137 Identities=11% Similarity=0.161 Sum_probs=89.0
Q ss_pred ccCeEEecc-eEEECcCCccccCCCCCCCcccEEEEEEEEeCCCCCCCCceeeec-----CcccEEEEeeEEecC-----
Q 042447 129 LNGVLFQGS-GVIDGSGSKWWASSCKKNKSESVRVYQVLVSAPEDSPNTDGIHIT-----ESTNVVLQDCKIGTG----- 197 (355)
Q Consensus 129 ~~ni~I~G~-G~IdG~G~~~~~~~~~~~~~~nv~i~~v~I~~~~~~~n~DGi~~~-----~s~nv~I~n~~i~~g----- 197 (355)
..+++|.|. +.|.|.|.... ...+||.|+|++|+........|+|.+. .++||+|++|.|..+
T Consensus 71 ~sn~TI~G~~a~i~g~gl~i~------~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~ 144 (330)
T 2qy1_A 71 KSDVTIKGANGSAANFGIRVV------GNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCS 144 (330)
T ss_dssp CCSEEEEECTTCBBSSEEEEE------SSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCT
T ss_pred CCCeEEECCCcEEeeeeEEEe------CCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccc
Confidence 456666653 23444332221 0238999999999975433467999998 599999999999532
Q ss_pred -------CceEEeecCCccEEEEeeEEcC-CceEEeccCCcccccceEEEEEEecceecCCce-eEEEEEeccCCeEEee
Q 042447 198 -------DDCISIVNGSSAIKMKRIFCGP-GHGISIGSLGKDNSMGIVTKVVLDTAYLRETAN-GLRIKTWQTSAVKISQ 268 (355)
Q Consensus 198 -------DD~I~ik~g~~ni~i~n~~~~~-~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~-gi~Ik~~~~~~~~i~n 268 (355)
|..+.++.++.+|+|+||++.. ..++-+|+.-.+.... ..+|+|.++.+.++.. .-++. ...+++-|
T Consensus 145 ~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~-~~~vT~h~N~f~~~~~R~Pr~r---~G~~hv~N 220 (330)
T 2qy1_A 145 GAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNS-AARTTYHHNRFENVESRVPLQR---FGLSHIYN 220 (330)
T ss_dssp TCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGGGG-GCEEEEESCEEEEEEECTTEEE---SSEEEEES
T ss_pred cCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccccCC-CceEEEECcEEcCCCCCCCcee---cceEEEEe
Confidence 6678888899999999999963 2356667632111111 2578999998876532 22332 23356666
Q ss_pred EEEEeEE
Q 042447 269 IMYRNIS 275 (355)
Q Consensus 269 Itf~NI~ 275 (355)
-.|.|+.
T Consensus 221 N~~~n~~ 227 (330)
T 2qy1_A 221 NYFNNVT 227 (330)
T ss_dssp CEEEEEC
T ss_pred eEEEccc
Confidence 6777764
No 44
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.18 E-value=2.6e-06 Score=83.42 Aligned_cols=136 Identities=21% Similarity=0.235 Sum_probs=91.3
Q ss_pred ccCeEEecce---EEECcCCccccCCCCCCCcccEEEEEEEEeCCCC---------------CCCCceeeecCcccEEEE
Q 042447 129 LNGVLFQGSG---VIDGSGSKWWASSCKKNKSESVRVYQVLVSAPED---------------SPNTDGIHITESTNVVLQ 190 (355)
Q Consensus 129 ~~ni~I~G~G---~IdG~G~~~~~~~~~~~~~~nv~i~~v~I~~~~~---------------~~n~DGi~~~~s~nv~I~ 190 (355)
..|.+|.|.| .|.|.|.... ..+||.|+|++|+.+.+ ..+.|+|.+..++||+|+
T Consensus 131 ~snkTI~G~G~~~~i~g~gl~i~-------~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWID 203 (416)
T 1vbl_A 131 GSNTSIIGVGKDAKIKGGGFLIK-------NVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWID 203 (416)
T ss_dssp CSSEEEEECTTCCEEESCEEEEE-------SCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEE
T ss_pred CCCeeEEecCCCeEEecCEEEee-------cCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEE
Confidence 3577777753 5665554332 12899999999986532 135799999999999999
Q ss_pred eeEEecC------------------CceEEeecCCccEEEEeeEEcCC-ceEEeccCCcccccceEEEEEEecceecCCc
Q 042447 191 DCKIGTG------------------DDCISIVNGSSAIKMKRIFCGPG-HGISIGSLGKDNSMGIVTKVVLDTAYLRETA 251 (355)
Q Consensus 191 n~~i~~g------------------DD~I~ik~g~~ni~i~n~~~~~~-~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~ 251 (355)
+|.|..+ |.++.++.++.+|+|+||++... .++-+|+.-.+.......+|+|.++.+.++.
T Consensus 204 Hcs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~ 283 (416)
T 1vbl_A 204 HNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVT 283 (416)
T ss_dssp SCEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEE
T ss_pred ccEEecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCc
Confidence 9999753 77888998999999999999642 3566776421111112246888888887653
Q ss_pred -eeEEEEEeccCCeEEeeEEEEeE
Q 042447 252 -NGLRIKTWQTSAVKISQIMYRNI 274 (355)
Q Consensus 252 -~gi~Ik~~~~~~~~i~nItf~NI 274 (355)
+..++. ...+++-|-.|.|.
T Consensus 284 ~R~Pr~R---~G~~Hv~NN~~~n~ 304 (416)
T 1vbl_A 284 QRLPRVR---FGQVHIYNNYYEFS 304 (416)
T ss_dssp ECSSEES---SCEEEEESCEEEEC
T ss_pred cCCcccc---cceEEEEcceEECC
Confidence 223332 22355666666654
No 45
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.16 E-value=5.3e-05 Score=69.95 Aligned_cols=241 Identities=16% Similarity=0.180 Sum_probs=119.8
Q ss_pred eEEEeeecCCCCCCCcchHHHHHHHHHHhhcCCCcEEEEcCCeEEEEeeeeeeccccccEEEEEceEEeecCCCCCCCc-
Q 042447 39 VLVNVDSFGAAGDGVSDDTQAFLNAWNTACSTPKSVFLVPAGRHYLVSATRFKGPCADKLVIQIDGTIVAPAEPDNWDP- 117 (355)
Q Consensus 39 ~~~nV~dyGA~gDG~tDdT~Aiq~Ai~~a~~~gg~~V~iP~G~tY~i~~~~l~~p~~~~~~l~~~g~l~~~~~~~~~~~- 117 (355)
+++.+++|||.+|-.+||+++|.+.+.. ...|++|.|. |....+.+.. -++.=...|+|........|.-
T Consensus 63 rvls~k~fga~~~~~~d~~~~~~~sl~s-----~~~v~i~~gv-f~ss~i~~~~---c~l~g~g~g~~~~~~~~gn~lvf 133 (542)
T 2x3h_A 63 RVLTSKPFGAAGDATTDDTEVIAASLNS-----QKAVTISDGV-FSSSGINSNY---CNLDGRGSGVLSHRSSTGNYLVF 133 (542)
T ss_dssp HBCBSSCTTCCCBSSSCCHHHHHHHHTS-----SSCEECCSEE-EEECCEEESC---CEEECTTTEEEEECSSSSCCEEE
T ss_pred eeeecccccccCCcccCcHHHHHhhhcc-----cccEeccccc-cccccccccc---ccccccCCceeeeecCCCCEEEE
Confidence 4677899999999999999999998874 5679999996 9876555431 2233233467765443333210
Q ss_pred cCcceEEEEEeccCeEEecce---EEECcCCccccCCCCCCCcccEEEEEEEEeCCC-----------------------
Q 042447 118 KLARIWLDFSKLNGVLFQGSG---VIDGSGSKWWASSCKKNKSESVRVYQVLVSAPE----------------------- 171 (355)
Q Consensus 118 ~~~~~~i~~~~~~ni~I~G~G---~IdG~G~~~~~~~~~~~~~~nv~i~~v~I~~~~----------------------- 171 (355)
..+ ....+.+++|.|.- +.+|+-..+-. -.+|.++++.+.+..
T Consensus 134 n~p----~~g~ls~~ti~~nk~~ds~qg~qvs~~g-------g~dvsv~~i~fsn~~g~gfsliayp~~~~p~g~~i~~i 202 (542)
T 2x3h_A 134 NNP----RTGRLSNITVESNKATDTTQGQQVSLAG-------GSDVTVSDVNFSNVKGTGFSLIAYPNDAPPDGLMIKGI 202 (542)
T ss_dssp ESC----EEEEEEEEEEECCCSSTTCBCCSEEEES-------CEEEEEEEEEEEEECSBEEEEEEECSSSCCBSCEEEEE
T ss_pred eCC----CCcceeeEEEecccCCccccceEEEecC-------CCcceEeeeeeeecCCCceeEEEcCCCCCCCceEEecc
Confidence 001 11224456665521 11111111100 145555555554321
Q ss_pred ------CC--CCCceeeecCcccEEEEeeEEecC--CceEEeecCCccEEEEeeEEcC-CceEEeccCCcccccceEEEE
Q 042447 172 ------DS--PNTDGIHITESTNVVLQDCKIGTG--DDCISIVNGSSAIKMKRIFCGP-GHGISIGSLGKDNSMGIVTKV 240 (355)
Q Consensus 172 ------~~--~n~DGi~~~~s~nv~I~n~~i~~g--DD~I~ik~g~~ni~i~n~~~~~-~~Gi~iGS~g~~~~~~~v~nV 240 (355)
.. +...-.-+.+|+|..|+++..++. =.++.+|...+.-.++|+.-.. .|-..-|.++.-.. .|-
T Consensus 203 rg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~a~ynivsnvig~~cqhv~yngte~~~ap----snn 278 (542)
T 2x3h_A 203 RGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVIGADCQHVTYNGTEGPIAP----SNN 278 (542)
T ss_dssp EEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEEEESCSEEEEEECSSSCCC----CSC
T ss_pred ccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecceeeehhhhhhhccceeEEECCccCCcCC----ccc
Confidence 11 111123345566666666666553 3556666554444444443221 23344444442211 111
Q ss_pred EEecceecCCceeEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEEcCCCCceeCEEEEeEEEEeCCCc
Q 042447 241 VLDTAYLRETANGLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFACSDTVPCSDIVLSNVNLEKKDGT 310 (355)
Q Consensus 241 ~i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~~~~~~~~~nI~~~nV~i~~~~g~ 310 (355)
.|+.....+..+..-+.. .+....|+++....-+......-++.+++++ =...||-+...+|.
T Consensus 279 ~i~~vmannpkyaavv~g-kgs~nlisdvlvdys~sda~qahgvtv~g~~------ni~~nilmsgcdg~ 341 (542)
T 2x3h_A 279 LIKGVMANNPKYAAVVAG-KGSTNLISDVLVDYSTSDARQAHGVTVEGSD------NVINNVLMSGCDGT 341 (542)
T ss_dssp EEEEEEEESCSSEEEECC-SCBSCEEEEEEEECTTCCCSEEEEEEECSBS------CEEEEEEEECCSSB
T ss_pred hhhHhhcCCCceEEEEEe-cCccceehheeeeccccchhhhcceEEeccc------hHhhhheeccCCCC
Confidence 222222223334333321 1344567777766554333323346666653 23566777766653
No 46
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.10 E-value=3.3e-05 Score=73.23 Aligned_cols=132 Identities=14% Similarity=0.227 Sum_probs=90.7
Q ss_pred cCeEEecce---EEECcCCccccCCCCCCCcccEEEEEEEEeCCCCCCCCceeeecC-cccEEEEeeEEec---------
Q 042447 130 NGVLFQGSG---VIDGSGSKWWASSCKKNKSESVRVYQVLVSAPEDSPNTDGIHITE-STNVVLQDCKIGT--------- 196 (355)
Q Consensus 130 ~ni~I~G~G---~IdG~G~~~~~~~~~~~~~~nv~i~~v~I~~~~~~~n~DGi~~~~-s~nv~I~n~~i~~--------- 196 (355)
.+++|.|.| .|+|.|.... ..+||.|+|++|+... ....|+|.+.. ++||+|++|.|..
T Consensus 79 sn~TI~G~g~~~~i~G~gl~i~-------~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~ 150 (326)
T 3vmv_A 79 KNISIIGVGTNGEFDGIGIRLS-------NAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSD 150 (326)
T ss_dssp EEEEEEECTTCCEEESCCEEEE-------SEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTT
T ss_pred CCeEEEecCCCeEEeCcEEEEE-------ecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCcc
Confidence 567777643 6776664432 2389999999999754 34679999996 9999999999952
Q ss_pred -CCceEEeecCCccEEEEeeEEcC-CceEEeccCCcccccceEEEEEEecceecCCce-eEEEEEeccCCeEEeeEEEEe
Q 042447 197 -GDDCISIVNGSSAIKMKRIFCGP-GHGISIGSLGKDNSMGIVTKVVLDTAYLRETAN-GLRIKTWQTSAVKISQIMYRN 273 (355)
Q Consensus 197 -gDD~I~ik~g~~ni~i~n~~~~~-~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~-gi~Ik~~~~~~~~i~nItf~N 273 (355)
.|..+.++.++.+|+|+||++.. ..++-+|+.-... .+. .+|+|.++.+.++.. .-++. ...+++-|-.|.|
T Consensus 151 ~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~-~~~-~~vT~~~N~f~~~~~R~Pr~r---~G~~Hv~NN~~~n 225 (326)
T 3vmv_A 151 YYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNAS-LAP-DKITYHHNYFNNLNSRVPLIR---YADVHMFNNYFKD 225 (326)
T ss_dssp SSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSCGG-GCC-EEEEEESCEEEEEEECTTEEE---SCEEEEESCEEEE
T ss_pred ccCcceEecCCCceEEEEceEEecCceEEEECCCCCCc-ccC-ccEEEEeeEecCCcCcCCccc---CCcEEEEccEEEC
Confidence 37788999999999999999964 2367777642111 111 578999998876531 22332 1234555666666
Q ss_pred E
Q 042447 274 I 274 (355)
Q Consensus 274 I 274 (355)
+
T Consensus 226 ~ 226 (326)
T 3vmv_A 226 I 226 (326)
T ss_dssp E
T ss_pred C
Confidence 5
No 47
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.09 E-value=5.3e-06 Score=80.80 Aligned_cols=135 Identities=19% Similarity=0.267 Sum_probs=90.1
Q ss_pred ccCeEEecce---EEECcCCccccCCCCCCCcccEEEEEEEEeCCCC---------------CCCCceeeecCcccEEEE
Q 042447 129 LNGVLFQGSG---VIDGSGSKWWASSCKKNKSESVRVYQVLVSAPED---------------SPNTDGIHITESTNVVLQ 190 (355)
Q Consensus 129 ~~ni~I~G~G---~IdG~G~~~~~~~~~~~~~~nv~i~~v~I~~~~~---------------~~n~DGi~~~~s~nv~I~ 190 (355)
..|.+|.|.| .|.|.|... . . +||.|+|++|+.+.+ ....|+|.+..++||+|+
T Consensus 126 ~snkTI~G~G~~~~i~g~gl~i--~-----~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWID 197 (399)
T 2o04_A 126 PANTTIVGSGTNAKVVGGNFQI--K-----S-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWID 197 (399)
T ss_dssp CSSEEEEESSSCCEEESCEEEE--C-----S-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEE
T ss_pred CCCceEEeccCCeEEeeCEEEe--e-----C-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEE
Confidence 3577787753 565544322 1 1 899999999986532 135799999999999999
Q ss_pred eeEEecC------------------CceEEeecCCccEEEEeeEEcC-CceEEeccCCcccccceEEEEEEecceecCCc
Q 042447 191 DCKIGTG------------------DDCISIVNGSSAIKMKRIFCGP-GHGISIGSLGKDNSMGIVTKVVLDTAYLRETA 251 (355)
Q Consensus 191 n~~i~~g------------------DD~I~ik~g~~ni~i~n~~~~~-~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~ 251 (355)
+|.|..+ |.++.++.++.+|+|+||++.. ..++-+|+.-.+.......+|+|.++.+.++.
T Consensus 198 Hcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~ 277 (399)
T 2o04_A 198 HCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIV 277 (399)
T ss_dssp SCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEE
T ss_pred eeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCc
Confidence 9999754 7788899999999999999964 23566776421111112247888888886653
Q ss_pred -eeEEEEEeccCCeEEeeEEEEeE
Q 042447 252 -NGLRIKTWQTSAVKISQIMYRNI 274 (355)
Q Consensus 252 -~gi~Ik~~~~~~~~i~nItf~NI 274 (355)
+.-++. ...+++-|-.|.|.
T Consensus 278 ~R~Pr~R---~G~~Hv~NN~~~n~ 298 (399)
T 2o04_A 278 QAAPRVR---FGQVHVYNNYYEGS 298 (399)
T ss_dssp ECTTEES---SCEEEEESCEEECC
T ss_pred ccCCCcc---cceEEEEcceEECC
Confidence 222332 12355666666655
No 48
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.02 E-value=5.6e-05 Score=72.64 Aligned_cols=131 Identities=15% Similarity=0.257 Sum_probs=87.4
Q ss_pred ccCeEEecc---eEEECcCCccccCCCCCCCcccEEEEEEEEeCC--CCCCCCceeeecCcccEEEEeeEEe-cCCceEE
Q 042447 129 LNGVLFQGS---GVIDGSGSKWWASSCKKNKSESVRVYQVLVSAP--EDSPNTDGIHITESTNVVLQDCKIG-TGDDCIS 202 (355)
Q Consensus 129 ~~ni~I~G~---G~IdG~G~~~~~~~~~~~~~~nv~i~~v~I~~~--~~~~n~DGi~~~~s~nv~I~n~~i~-~gDD~I~ 202 (355)
..|.+|.|. +.|.|.|.... ...+||.|++++|+.. ......|+|.+..+++|+|++|.|. .+|..+.
T Consensus 107 ~snkTI~G~G~~~~i~G~gl~i~------~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~ 180 (359)
T 1idk_A 107 TSNKSLIGEGSSGAIKGKGLRIV------SGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYV 180 (359)
T ss_dssp CSSEEEEECTTTCEEESCCEEEC------TTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEE
T ss_pred CCCceEEEecCCeEEecceEEEe------cCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEE
Confidence 367888875 37777664322 1238999999999863 2224569999999999999999996 5777777
Q ss_pred e-ecCCccEEEEeeEEcCC----------c--e-EEeccCCcccccceEEEEEEecceecCCc-eeEEEEEeccCCeEEe
Q 042447 203 I-VNGSSAIKMKRIFCGPG----------H--G-ISIGSLGKDNSMGIVTKVVLDTAYLRETA-NGLRIKTWQTSAVKIS 267 (355)
Q Consensus 203 i-k~g~~ni~i~n~~~~~~----------~--G-i~iGS~g~~~~~~~v~nV~i~n~~~~~~~-~gi~Ik~~~~~~~~i~ 267 (355)
. +.++.+|+|+||++... | + +-+|+. .+|+|.++.+.+.. +.-++. ....+++-
T Consensus 181 ~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~s---------d~vT~hhN~f~~~~~R~Pr~r--~g~~~hv~ 249 (359)
T 1idk_A 181 LGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDA---------DLVTMKGNYIYHTSGRSPKVQ--DNTLLHAV 249 (359)
T ss_dssp ECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSS---------CEEEEESCEEESBCSCTTEEC--TTCEEEEE
T ss_pred ecccCcceEEEECcEecCCcccccccCccccceEEEEecC---------CCeEEEceEeecCcccCcccc--CCceEEEE
Confidence 5 56789999999999531 1 2 222321 27888888887653 112222 01125666
Q ss_pred eEEEEeEEE
Q 042447 268 QIMYRNISG 276 (355)
Q Consensus 268 nItf~NI~g 276 (355)
|-.|.|..+
T Consensus 250 NN~~~n~~~ 258 (359)
T 1idk_A 250 NNYWYDISG 258 (359)
T ss_dssp SCEEEEEEE
T ss_pred CCEEecccc
Confidence 767777653
No 49
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.96 E-value=1.5e-05 Score=76.71 Aligned_cols=114 Identities=16% Similarity=0.256 Sum_probs=78.8
Q ss_pred ccEEEEEEEEeCCCC-C----------CCCceeeecC-cccEEEEeeEEec------------------CCceEEeecCC
Q 042447 158 ESVRVYQVLVSAPED-S----------PNTDGIHITE-STNVVLQDCKIGT------------------GDDCISIVNGS 207 (355)
Q Consensus 158 ~nv~i~~v~I~~~~~-~----------~n~DGi~~~~-s~nv~I~n~~i~~------------------gDD~I~ik~g~ 207 (355)
+||-|+|++|+...+ . .+.|+|.+.. ++||+|++|.|.. .|.++.++.++
T Consensus 114 ~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s 193 (361)
T 1pe9_A 114 NNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGS 193 (361)
T ss_dssp EEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTC
T ss_pred ceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeecCC
Confidence 899999999986431 0 3578999999 9999999999975 37789999899
Q ss_pred ccEEEEeeEEcC-CceEEeccCCccc-ccceEEEEEEecceecCCce-eEEEEEeccCCeEEeeEEEEeE
Q 042447 208 SAIKMKRIFCGP-GHGISIGSLGKDN-SMGIVTKVVLDTAYLRETAN-GLRIKTWQTSAVKISQIMYRNI 274 (355)
Q Consensus 208 ~ni~i~n~~~~~-~~Gi~iGS~g~~~-~~~~v~nV~i~n~~~~~~~~-gi~Ik~~~~~~~~i~nItf~NI 274 (355)
++|+|+||++.. ..++-+|+.-.+. ....-.+|+|.++.+.++.. .-++. ...+++-|-.|.|.
T Consensus 194 ~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~R---~G~~Hv~NN~~~~~ 260 (361)
T 1pe9_A 194 DYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRVR---YGSIHSFNNVFKGD 260 (361)
T ss_dssp EEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEES---SCEEEEESCEEEEE
T ss_pred CcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCcccc---cceEEEEcceEecc
Confidence 999999999964 2356667642110 01112478999988876532 22331 22356666666665
No 50
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.90 E-value=0.00014 Score=69.97 Aligned_cols=130 Identities=18% Similarity=0.264 Sum_probs=86.3
Q ss_pred cCeEEecce---EEECcCCccccCCCCCCCcccEEEEEEEEeCCCC--CCCCceeeecCcccEEEEeeEEe-cCCceEE-
Q 042447 130 NGVLFQGSG---VIDGSGSKWWASSCKKNKSESVRVYQVLVSAPED--SPNTDGIHITESTNVVLQDCKIG-TGDDCIS- 202 (355)
Q Consensus 130 ~ni~I~G~G---~IdG~G~~~~~~~~~~~~~~nv~i~~v~I~~~~~--~~n~DGi~~~~s~nv~I~n~~i~-~gDD~I~- 202 (355)
++.+|.|.| .|.|.|..... ..+||.|++++|+.... ....|+|.+..+++|+|++|.|. .+|..+.
T Consensus 108 snkTI~G~g~~~~I~G~gl~i~~------~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~ 181 (359)
T 1qcx_A 108 SNKSIVGQGTKGVIKGKGLRVVS------GAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVL 181 (359)
T ss_dssp SSEEEEECTTCCEEESCCEEEET------TCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEE
T ss_pred CCceEEecCCceEEecceEEEec------CCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceee
Confidence 577887754 77777644321 22899999999986422 23569999999999999999996 4666663
Q ss_pred eecCCccEEEEeeEEcCC----------c--e-EEeccCCcccccceEEEEEEecceecCCce-eEEEEEeccCCeEEee
Q 042447 203 IVNGSSAIKMKRIFCGPG----------H--G-ISIGSLGKDNSMGIVTKVVLDTAYLRETAN-GLRIKTWQTSAVKISQ 268 (355)
Q Consensus 203 ik~g~~ni~i~n~~~~~~----------~--G-i~iGS~g~~~~~~~v~nV~i~n~~~~~~~~-gi~Ik~~~~~~~~i~n 268 (355)
.+.++.+|+|+||++... | + +-+|+. .++++.++.+.+... .-++.. ...+++-|
T Consensus 182 ~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~s---------d~vT~~~N~f~~~~~R~Pr~r~--~~~~hv~N 250 (359)
T 1qcx_A 182 GTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSN---------DMVTLKGNYFYNLSGRMPKVQG--NTLLHAVN 250 (359)
T ss_dssp CSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSS---------EEEEEESCEEESBCSCTTEECS--SEEEEEES
T ss_pred cccccccEEEECcEecCCccccccCcccccceeEEecCC---------CCeehcccEeccCcccCceecC--CceEEEEc
Confidence 456789999999999632 2 2 223321 378888888876532 123321 11256666
Q ss_pred EEEEeEEE
Q 042447 269 IMYRNISG 276 (355)
Q Consensus 269 Itf~NI~g 276 (355)
-.|.|..+
T Consensus 251 N~~~n~~~ 258 (359)
T 1qcx_A 251 NLFHNFDG 258 (359)
T ss_dssp CEEEEEEE
T ss_pred cEEECccC
Confidence 67777644
No 51
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=97.88 E-value=0.00069 Score=64.00 Aligned_cols=135 Identities=10% Similarity=0.069 Sum_probs=85.0
Q ss_pred ccEEEEEEEEeCCCC--CCCCceeeecCcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcCCceEEeccCCcccccc
Q 042447 158 ESVRVYQVLVSAPED--SPNTDGIHITESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGPGHGISIGSLGKDNSMG 235 (355)
Q Consensus 158 ~nv~i~~v~I~~~~~--~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~~~Gi~iGS~g~~~~~~ 235 (355)
.++.++|++|.+... ....-++.+. ++++.+.||.|...-|.+....+ ...+++|++.+.--+-+|..
T Consensus 94 ~~f~~~nlt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~~--r~~~~~c~I~G~vDFIfG~~------- 163 (319)
T 1gq8_A 94 AGFLARDITFQNTAGAAKHQAVALRVG-SDLSAFYRCDILAYQDSLYVHSN--RQFFINCFIAGTVDFIFGNA------- 163 (319)
T ss_dssp TTCEEEEEEEEECCCGGGCCCCSEEEC-CTTEEEEEEEEECSTTCEEECSS--EEEEESCEEEESSSCEEESC-------
T ss_pred CCEEEEEeEeEccCCCcCCceEEEEec-CCcEEEEEeEECccceeeeecCc--cEEEEecEEEeeeeEEecCC-------
Confidence 788999999987532 1234567775 79999999999887788887543 35889999975443445441
Q ss_pred eEEEEEEecceecCCc----eeEEEEEec-cCCeEEeeEEEEeEEEeecCcc-------cEEEEcCCCCceeCEEEEeEE
Q 042447 236 IVTKVVLDTAYLRETA----NGLRIKTWQ-TSAVKISQIMYRNISGTTKSSK-------AMKFACSDTVPCSDIVLSNVN 303 (355)
Q Consensus 236 ~v~nV~i~n~~~~~~~----~gi~Ik~~~-~~~~~i~nItf~NI~g~~~~~~-------~i~i~~~~~~~~~nI~~~nV~ 303 (355)
...|++|.+.... ..-.|-... .....-....|.|++.+..... ...| +.+=.+-..+.|-+-.
T Consensus 164 ---~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yL-GRpW~~~sr~v~~~t~ 239 (319)
T 1gq8_A 164 ---AVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYL-GRPWKEYSRTVVMQSS 239 (319)
T ss_dssp ---EEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEE-ECCSSTTCEEEEESCE
T ss_pred ---cEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEe-cccCCCcceEEEEecc
Confidence 2588898876432 111232221 1122345667777776654321 2344 6555566678888877
Q ss_pred EEe
Q 042447 304 LEK 306 (355)
Q Consensus 304 i~~ 306 (355)
|..
T Consensus 240 ~~~ 242 (319)
T 1gq8_A 240 ITN 242 (319)
T ss_dssp ECT
T ss_pred CCC
Confidence 765
No 52
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=97.87 E-value=7.1e-05 Score=71.75 Aligned_cols=132 Identities=17% Similarity=0.181 Sum_probs=88.6
Q ss_pred cCeEEecc-eEEECcCCccccCCCCCCCcccEEEEEEEEeCCCC-CCCCceeeecCcccEEEEeeEEecC----------
Q 042447 130 NGVLFQGS-GVIDGSGSKWWASSCKKNKSESVRVYQVLVSAPED-SPNTDGIHITESTNVVLQDCKIGTG---------- 197 (355)
Q Consensus 130 ~ni~I~G~-G~IdG~G~~~~~~~~~~~~~~nv~i~~v~I~~~~~-~~n~DGi~~~~s~nv~I~n~~i~~g---------- 197 (355)
.+++|.|. +.+.|-|.... ..+||.|++++|+.... ..+.|+|.+..++||+|++|.|..+
T Consensus 89 sn~TI~G~~~~~~g~gl~i~-------~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~ 161 (353)
T 1air_A 89 KGITIIGANGSSANFGIWIK-------KSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDN 161 (353)
T ss_dssp SCEEEEECTTCCBSSEEEEE-------SCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGG
T ss_pred CCEEEEeccCCCCCceEEEe-------ccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCccccccccc
Confidence 68888884 33333332221 23899999999986432 3467999999999999999999642
Q ss_pred ----CceEEeecCCccEEEEeeEEcCCc-eEEeccCCcccccceEEEEEEecceecCCc-eeEEEEEeccCCeEEeeEEE
Q 042447 198 ----DDCISIVNGSSAIKMKRIFCGPGH-GISIGSLGKDNSMGIVTKVVLDTAYLRETA-NGLRIKTWQTSAVKISQIMY 271 (355)
Q Consensus 198 ----DD~I~ik~g~~ni~i~n~~~~~~~-Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~-~gi~Ik~~~~~~~~i~nItf 271 (355)
|..+.++.++.+|+|+||++...+ +.-+|+.-.+ .. .+|+|.++.+.+.. +..++. ...+++-|-.|
T Consensus 162 ~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~---~g-~~vT~hhN~f~~~~~R~Pr~r---~G~~Hv~NN~~ 234 (353)
T 1air_A 162 DTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSD---TG-RNITYHHNYYNDVNARLPLQR---GGLVHAYNNLY 234 (353)
T ss_dssp CCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTC---CC-CEEEEESCEEEEEEECSCEEE---SSEEEEESCEE
T ss_pred ccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCC---CC-ceEEEEceEEcCCcCCCCCCc---CceEEEEccEE
Confidence 667888889999999999996432 4556664211 12 68899999887653 223332 22345666666
Q ss_pred EeEE
Q 042447 272 RNIS 275 (355)
Q Consensus 272 ~NI~ 275 (355)
.|+.
T Consensus 235 ~n~~ 238 (353)
T 1air_A 235 TNIT 238 (353)
T ss_dssp EEES
T ss_pred ECCC
Confidence 6654
No 53
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=97.71 E-value=0.001 Score=62.82 Aligned_cols=134 Identities=10% Similarity=0.081 Sum_probs=84.5
Q ss_pred ccEEEEEEEEeCCCC--CCCCceeeecCcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcCCceEEeccCCcccccc
Q 042447 158 ESVRVYQVLVSAPED--SPNTDGIHITESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGPGHGISIGSLGKDNSMG 235 (355)
Q Consensus 158 ~nv~i~~v~I~~~~~--~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~~~Gi~iGS~g~~~~~~ 235 (355)
.++.++|++|.+... ....-++.+. ++++.+.||.|...-|.+....+ ...+++|++.+.--+-+|..
T Consensus 90 ~~f~~~~lt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~~--r~~~~~c~I~G~vDFIfG~~------- 159 (317)
T 1xg2_A 90 QGFILQDICIQNTAGPAKDQAVALRVG-ADMSVINRCRIDAYQDTLYAHSQ--RQFYRDSYVTGTVDFIFGNA------- 159 (317)
T ss_dssp TTCEEESCEEEECCCGGGCCCCSEEEC-CTTEEEESCEEECSTTCEEECSS--EEEEESCEEEESSSCEEECC-------
T ss_pred CCEEEEEeEEecccCCccCceEEEEEe-CCcEEEEEeEeCccccceeecCc--cEEEEeeEEEeceeEEcCCc-------
Confidence 788899999987532 1234567775 78999999999887778887543 34889999975444445442
Q ss_pred eEEEEEEecceecCCc-----eeEEEEEec-cCCeEEeeEEEEeEEEeecCcc-------cEEEEcCCCCceeCEEEEeE
Q 042447 236 IVTKVVLDTAYLRETA-----NGLRIKTWQ-TSAVKISQIMYRNISGTTKSSK-------AMKFACSDTVPCSDIVLSNV 302 (355)
Q Consensus 236 ~v~nV~i~n~~~~~~~-----~gi~Ik~~~-~~~~~i~nItf~NI~g~~~~~~-------~i~i~~~~~~~~~nI~~~nV 302 (355)
...|++|.+.... .+ .|-... .....-....|.|++.+..... ...| +.+=.+-..+.|-+-
T Consensus 160 ---~avf~~c~i~~~~~~~~~~~-~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yL-GRpW~~~sr~v~~~t 234 (317)
T 1xg2_A 160 ---AVVFQKCQLVARKPGKYQQN-MVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYL-GRPWKEYSRTVVMES 234 (317)
T ss_dssp ---EEEEESCEEEECCCSTTCCE-EEEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEE-ECCSSTTCEEEEESC
T ss_pred ---eEEEeeeEEEEeccCCCCcc-EEEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEe-ecccCCCceEEEEec
Confidence 2688898876422 12 232221 1122344567777776654321 2344 665556667888888
Q ss_pred EEEe
Q 042447 303 NLEK 306 (355)
Q Consensus 303 ~i~~ 306 (355)
.|..
T Consensus 235 ~~~~ 238 (317)
T 1xg2_A 235 YLGG 238 (317)
T ss_dssp EECT
T ss_pred ccCC
Confidence 7765
No 54
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=97.62 E-value=0.0007 Score=67.86 Aligned_cols=44 Identities=9% Similarity=0.138 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhcCCCcEEEEcCCeEEEEeeeeeec--cccccEEEEEc
Q 042447 57 TQAFLNAWNTACSTPKSVFLVPAGRHYLVSATRFKG--PCADKLVIQID 103 (355)
Q Consensus 57 T~Aiq~Ai~~a~~~gg~~V~iP~G~tY~i~~~~l~~--p~~~~~~l~~~ 103 (355)
...||+|++.| + .|.+|+|++|+ |.-..+.+.. .....++|...
T Consensus 31 ~~~Lq~Ai~~A-~-pGDtI~L~~Gt-Y~~~~i~i~~sGt~~~pItl~~~ 76 (506)
T 1dbg_A 31 NETLYQVVKEV-K-PGGLVQIADGT-YKDVQLIVSNSGKSGLPITIKAL 76 (506)
T ss_dssp HHHHHHHHHHC-C-TTCEEEECSEE-EETCEEEECCCCBTTBCEEEEES
T ss_pred HHHHHHHHHhC-C-CCCEEEECCCE-EecceEEEecCCcCCCCEEEECC
Confidence 55799999963 3 47899999995 8743455421 11245666553
No 55
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=97.55 E-value=0.0078 Score=57.33 Aligned_cols=79 Identities=5% Similarity=0.031 Sum_probs=56.0
Q ss_pred ccEEEEEEEEeCCCC----------------CCCCcee--eecCcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcC
Q 042447 158 ESVRVYQVLVSAPED----------------SPNTDGI--HITESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGP 219 (355)
Q Consensus 158 ~nv~i~~v~I~~~~~----------------~~n~DGi--~~~~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~ 219 (355)
.++.++|++|.+... ....-++ .+. ++++.+.||.|...-|.+.... ....++||++.+
T Consensus 96 ~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~-~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I~G 172 (342)
T 2nsp_A 96 KDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKS-GDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRISG 172 (342)
T ss_dssp BSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTT-CBSEEEEEEEEECSTTCEEECS--SEEEEESCEEEE
T ss_pred CCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeec-cCcEEEEeeEEecccceEEECC--CCEEEEcCEEEe
Confidence 788999999987541 1123345 443 7999999999988777777753 468889999976
Q ss_pred CceEEeccCCcccccceEEEEEEecceecC
Q 042447 220 GHGISIGSLGKDNSMGIVTKVVLDTAYLRE 249 (355)
Q Consensus 220 ~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~ 249 (355)
.--+-+|.- ...|++|.+..
T Consensus 173 ~vDFIFG~a----------~a~f~~c~i~~ 192 (342)
T 2nsp_A 173 TVDFIFGDG----------TALFNNCDLVS 192 (342)
T ss_dssp SEEEEEESS----------EEEEESCEEEE
T ss_pred ceEEEeCCc----------eEEEecCEEEE
Confidence 655556552 35788888753
No 56
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=97.33 E-value=0.0085 Score=57.47 Aligned_cols=111 Identities=12% Similarity=0.024 Sum_probs=70.9
Q ss_pred ccEEEEEEEEeCCCC----------------CCCCceeeec-CcccEEEEeeEEecCCceEEeecCCccEEEEeeEEcCC
Q 042447 158 ESVRVYQVLVSAPED----------------SPNTDGIHIT-ESTNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCGPG 220 (355)
Q Consensus 158 ~nv~i~~v~I~~~~~----------------~~n~DGi~~~-~s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~~~ 220 (355)
.++.++|++|.+... ....-++.+. .++...+.||.|...-|.+... ......+++|++.+.
T Consensus 122 ~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~-~~gr~yf~~c~I~Gt 200 (364)
T 3uw0_A 122 PNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSK-TGSRSYFSDCEISGH 200 (364)
T ss_dssp TTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEEC-TTCEEEEESCEEEES
T ss_pred CCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeC-CCCCEEEEcCEEEcC
Confidence 788999999987632 1233456665 4799999999998877878774 246788999999876
Q ss_pred ceEEeccCCcccccceEEEEEEecceecCCc------eeEEEEEeccCCeEEeeEEEEeEEEeec
Q 042447 221 HGISIGSLGKDNSMGIVTKVVLDTAYLRETA------NGLRIKTWQTSAVKISQIMYRNISGTTK 279 (355)
Q Consensus 221 ~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~------~gi~Ik~~~~~~~~i~nItf~NI~g~~~ 279 (355)
-=+-+|.- ..+|+||++..-. .+-.|-........=....|.|++.+..
T Consensus 201 vDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 201 VDFIFGSG----------ITVFDNCNIVARDRSDIEPPYGYITAPSTLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp EEEEEESS----------EEEEESCEEEECCCSSCSSCCEEEEEECCCTTCSCCEEEESCEEEEC
T ss_pred CCEECCcc----------eEEEEeeEEEEeccCcccCCccEEEeCCcCCCCCcEEEEEeeEEecC
Confidence 55666642 3578888875321 1123332221111223467777776643
No 57
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=96.89 E-value=0.0076 Score=57.47 Aligned_cols=73 Identities=10% Similarity=0.148 Sum_probs=56.4
Q ss_pred ceeeecCcccEEEEeeEEe-----------------------cCCceEEeecCCccEEEEeeEEcC-CceE-EeccCCcc
Q 042447 177 DGIHITESTNVVLQDCKIG-----------------------TGDDCISIVNGSSAIKMKRIFCGP-GHGI-SIGSLGKD 231 (355)
Q Consensus 177 DGi~~~~s~nv~I~n~~i~-----------------------~gDD~I~ik~g~~ni~i~n~~~~~-~~Gi-~iGS~g~~ 231 (355)
-||.+..++||.|+|++|+ ..+|+|.+. ++++|.|++|++.. ..|+ .+..
T Consensus 106 ~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~-~s~nVwIDHcs~s~~~Dg~id~~~---- 180 (346)
T 1pxz_A 106 PCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR-NVTNAWIDHNSLSDCSDGLIDVTL---- 180 (346)
T ss_dssp CCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE-SCEEEEEESCEEECCSSEEEEEES----
T ss_pred ceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEe-cCceEEEEeeEEecCCCCcEeecc----
Confidence 3688888899999999996 246899995 68999999999965 3464 4521
Q ss_pred cccceEEEEEEecceecCCceeEEEEE
Q 042447 232 NSMGIVTKVVLDTAYLRETANGLRIKT 258 (355)
Q Consensus 232 ~~~~~v~nV~i~n~~~~~~~~gi~Ik~ 258 (355)
...+|+|+||.|.+-..++.+..
T Consensus 181 ----~s~~vTISnn~f~~H~k~~l~G~ 203 (346)
T 1pxz_A 181 ----GSTGITISNNHFFNHHKVMLLGH 203 (346)
T ss_dssp ----SCEEEEEESCEEESEEEEEEESC
T ss_pred ----CcceEEEEeeEEecCCceeEECC
Confidence 24799999999998877777743
No 58
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=96.71 E-value=0.012 Score=56.34 Aligned_cols=80 Identities=18% Similarity=0.153 Sum_probs=54.4
Q ss_pred eeeecCcccEEEEeeEEecC----------------CceEEeecCCccEEEEeeEEcCCc------eEEeccC-----Cc
Q 042447 178 GIHITESTNVVLQDCKIGTG----------------DDCISIVNGSSAIKMKRIFCGPGH------GISIGSL-----GK 230 (355)
Q Consensus 178 Gi~~~~s~nv~I~n~~i~~g----------------DD~I~ik~g~~ni~i~n~~~~~~~------Gi~iGS~-----g~ 230 (355)
||.+..++||.|+|.+|+.. .|+|.+ .++++|.|++|.+..+. ...+|-. |.
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i-~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl 175 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVI-DNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGA 175 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEe-cCCCcEEEEeeEEeccccCccccccccCccccccccc
Confidence 67777789999999999742 589999 57899999999996431 1111110 00
Q ss_pred ccccceEEEEEEecceecCCceeEEEEE
Q 042447 231 DNSMGIVTKVVLDTAYLRETANGLRIKT 258 (355)
Q Consensus 231 ~~~~~~v~nV~i~n~~~~~~~~gi~Ik~ 258 (355)
-.......+|+|++|.|.+...+..+..
T Consensus 176 ~Di~~~s~~VTiS~n~f~~h~k~~LiG~ 203 (355)
T 1pcl_A 176 LDIKKGSDYVTISYSRFELHDKTILIGH 203 (355)
T ss_pred eeeecCCCcEEEEeeEEcCCCceEEeCC
Confidence 0001124789999999999877766643
No 59
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=96.07 E-value=0.25 Score=47.93 Aligned_cols=111 Identities=10% Similarity=0.051 Sum_probs=68.7
Q ss_pred ccEEEEEEEEeCCCC------CCCCceeeecCcccEEEEeeEEecCCceEEeec----------CCccEEEEeeEEcCCc
Q 042447 158 ESVRVYQVLVSAPED------SPNTDGIHITESTNVVLQDCKIGTGDDCISIVN----------GSSAIKMKRIFCGPGH 221 (355)
Q Consensus 158 ~nv~i~~v~I~~~~~------~~n~DGi~~~~s~nv~I~n~~i~~gDD~I~ik~----------g~~ni~i~n~~~~~~~ 221 (355)
.++.++|++|.|... ...+-.+.+. ++...+.+|.|...-|-+.... ....-.+++|++.+.-
T Consensus 201 ~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~-gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtV 279 (422)
T 3grh_A 201 NGLQLQNLTIENTLGDSVDAGNHPAVALRTD-GDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDV 279 (422)
T ss_dssp TTCEEEEEEEEETTGGGSCSSCCCCCSEEEC-CSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEESE
T ss_pred CCEEEEeeEEEeCCCCCCCCCCCceEEEEec-CCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEeccc
Confidence 788999999987532 1223345554 6899999999988777777632 2456788999987765
Q ss_pred eEEeccCCcccccceEEEEEEecceecCCc----eeEEEEEeccCCeEEeeEEEEeEEEeec
Q 042447 222 GISIGSLGKDNSMGIVTKVVLDTAYLRETA----NGLRIKTWQTSAVKISQIMYRNISGTTK 279 (355)
Q Consensus 222 Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~----~gi~Ik~~~~~~~~i~nItf~NI~g~~~ 279 (355)
=+-+|.. ..+|++|.+.... .+-.|-........-....|.|++.+..
T Consensus 280 DFIFG~a----------~AvFe~C~I~s~~~~~~~~g~ITA~~t~~~~~~Gfvf~nC~ita~ 331 (422)
T 3grh_A 280 DIVSGRG----------AVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAF 331 (422)
T ss_dssp EEEEESS----------EEEEESCEEEECCSSCSSCCEEEEECCBTTCCCCEEEESCEEEEC
T ss_pred cEEccCc----------eEEEEeeEEEEecCCCCCceEEEecCCCCCCCCEEEEECCEEEeC
Confidence 5666542 3578888875322 1122322222112234567777776643
No 60
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=96.04 E-value=0.015 Score=55.14 Aligned_cols=71 Identities=17% Similarity=0.250 Sum_probs=55.4
Q ss_pred eeeecCcccEEEEeeEEec------------CCceEEeecCCccEEEEeeEEcCC-ce-EEeccCCcccccceEEEEEEe
Q 042447 178 GIHITESTNVVLQDCKIGT------------GDDCISIVNGSSAIKMKRIFCGPG-HG-ISIGSLGKDNSMGIVTKVVLD 243 (355)
Q Consensus 178 Gi~~~~s~nv~I~n~~i~~------------gDD~I~ik~g~~ni~i~n~~~~~~-~G-i~iGS~g~~~~~~~v~nV~i~ 243 (355)
||.+..++||.|+|.+|+. +.|+|.+. +++||.|++|.+..+ .| +.+.. ...+|+|+
T Consensus 84 Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~-~s~nVWIDHcs~s~~~Dg~idi~~--------~s~~vTIS 154 (340)
T 3zsc_A 84 GLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVE-NSHHIWIDHITFVNGNDGAVDIKK--------YSNYITVS 154 (340)
T ss_dssp EEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEE-SCEEEEEESCEEESCSSCSEEEET--------TCEEEEEE
T ss_pred ceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEe-cCCcEEEEeeeeccCCccceEEec--------CCceEEEE
Confidence 6667678999999999975 57999995 589999999999654 45 66521 24799999
Q ss_pred cceecCCceeEEEE
Q 042447 244 TAYLRETANGLRIK 257 (355)
Q Consensus 244 n~~~~~~~~gi~Ik 257 (355)
+|.|.+...+..+.
T Consensus 155 nn~f~~h~k~~LiG 168 (340)
T 3zsc_A 155 WNKFVDHDKVSLVG 168 (340)
T ss_dssp SCEEESCSBCCEEC
T ss_pred CcEeccCceeeEeC
Confidence 99999877666554
No 61
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=96.02 E-value=0.02 Score=54.88 Aligned_cols=100 Identities=15% Similarity=0.235 Sum_probs=64.2
Q ss_pred eeee---cCcccEEEEeeEEec----------------CCceEEeecCCccEEEEeeEEcCCc------eEEeccC----
Q 042447 178 GIHI---TESTNVVLQDCKIGT----------------GDDCISIVNGSSAIKMKRIFCGPGH------GISIGSL---- 228 (355)
Q Consensus 178 Gi~~---~~s~nv~I~n~~i~~----------------gDD~I~ik~g~~ni~i~n~~~~~~~------Gi~iGS~---- 228 (355)
||.+ ..++||.|+|.+|+. ..|+|.|..++++|.|++|.+..+. +..+|-.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 6777 568999999999973 2589999765999999999996431 1111110
Q ss_pred -CcccccceEEEEEEecceecCCceeEEEEEecc--------CCeEEeeEEEEeEEEe
Q 042447 229 -GKDNSMGIVTKVVLDTAYLRETANGLRIKTWQT--------SAVKISQIMYRNISGT 277 (355)
Q Consensus 229 -g~~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~~--------~~~~i~nItf~NI~g~ 277 (355)
|.-.......+|+|++|.|.+-..+..+..... ..+++.+-.|.|+...
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R 241 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTER 241 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEEC
T ss_pred cceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCcccc
Confidence 000001124799999999988776666643211 1356666677777543
No 62
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=95.88 E-value=0.029 Score=54.50 Aligned_cols=94 Identities=13% Similarity=0.192 Sum_probs=65.1
Q ss_pred ccEEEEEEEEeCCCC----CCCCceeeecCc--ccEEEEeeEEe-cCCceEEeecCCccEEEEeeEEcC-----------
Q 042447 158 ESVRVYQVLVSAPED----SPNTDGIHITES--TNVVLQDCKIG-TGDDCISIVNGSSAIKMKRIFCGP----------- 219 (355)
Q Consensus 158 ~nv~i~~v~I~~~~~----~~n~DGi~~~~s--~nv~I~n~~i~-~gDD~I~ik~g~~ni~i~n~~~~~----------- 219 (355)
.+.+|.+++|..-.+ ..+.|||.+..+ .+.+|++|++. +.||+|.+......++|+||..+.
T Consensus 161 s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~nn~a~~Ng~~~~~~n~~ 240 (400)
T 1ru4_A 161 SYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAF 240 (400)
T ss_dssp CSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEESCEEESTTCCCSCCTTC
T ss_pred CCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEEEeEEEECCcccccccccc
Confidence 366777777764322 246789987654 78899999994 688999997666778999998731
Q ss_pred ---CceEEeccCCcccccceEEEEEEecceec-CCceeEEEE
Q 042447 220 ---GHGISIGSLGKDNSMGIVTKVVLDTAYLR-ETANGLRIK 257 (355)
Q Consensus 220 ---~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~-~~~~gi~Ik 257 (355)
+.|+.+|.+. ...+.+++||... +...|+...
T Consensus 241 ~gngnGf~lgg~~------~~~~~~v~nn~a~~N~~~G~~~n 276 (400)
T 1ru4_A 241 AGNGNGFKLGGNQ------AVGNHRITRSVAFGNVSKGFDQN 276 (400)
T ss_dssp CCCCCSEECCCTT------CCCCCEEESCEEESCSSEEEECT
T ss_pred ccCCCCEEEeccC------CcCCEEEEeeEEECCcCcCEeec
Confidence 3468887652 1245678888754 456787765
No 63
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=95.88 E-value=0.019 Score=54.84 Aligned_cols=98 Identities=17% Similarity=0.190 Sum_probs=60.6
Q ss_pred ceeeecCcccEEEEeeEEec------CCceEEeecCCccEEEEeeEEcCCceEEecc-------CCcccccceEEEEEEe
Q 042447 177 DGIHITESTNVVLQDCKIGT------GDDCISIVNGSSAIKMKRIFCGPGHGISIGS-------LGKDNSMGIVTKVVLD 243 (355)
Q Consensus 177 DGi~~~~s~nv~I~n~~i~~------gDD~I~ik~g~~ni~i~n~~~~~~~Gi~iGS-------~g~~~~~~~v~nV~i~ 243 (355)
-||.+..++||.|+|.+|+. +.|+|.+. ++++|.|++|.+..+..-..|+ .|.-.......+|+|+
T Consensus 103 ~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~-~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTIS 181 (353)
T 1air_A 103 FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD-DSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVS 181 (353)
T ss_dssp SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEE-SCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEE
T ss_pred ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEee-CCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEE
Confidence 47888889999999999974 45999995 7899999999985431111111 0000000123689999
Q ss_pred cceecCCceeEEEEEeccC---CeEEeeEEEEeEE
Q 042447 244 TAYLRETANGLRIKTWQTS---AVKISQIMYRNIS 275 (355)
Q Consensus 244 n~~~~~~~~gi~Ik~~~~~---~~~i~nItf~NI~ 275 (355)
+|.|.+...+..+...... .+++.+-.|.|+.
T Consensus 182 nn~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~ 216 (353)
T 1air_A 182 YNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVN 216 (353)
T ss_dssp SCEEEEEEECCEESSSTTCCCCEEEEESCEEEEEE
T ss_pred eeEEcCCCceeEECCCcCCCCceEEEEceEEcCCc
Confidence 9999876555444322111 2444444555554
No 64
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=95.81 E-value=0.027 Score=53.18 Aligned_cols=92 Identities=10% Similarity=0.201 Sum_probs=64.1
Q ss_pred ceeeecCcccEEEEeeEEec----CCceEEeecCCccEEEEeeEEcCC----------ce-EEeccCCcccccceEEEEE
Q 042447 177 DGIHITESTNVVLQDCKIGT----GDDCISIVNGSSAIKMKRIFCGPG----------HG-ISIGSLGKDNSMGIVTKVV 241 (355)
Q Consensus 177 DGi~~~~s~nv~I~n~~i~~----gDD~I~ik~g~~ni~i~n~~~~~~----------~G-i~iGS~g~~~~~~~v~nV~ 241 (355)
.||.+..++||.|+|.+|+. +.|+|.+...+++|.|++|.+..+ .| +.+. ....+|+
T Consensus 95 ~gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~--------~~s~~VT 166 (326)
T 3vmv_A 95 IGIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMK--------RNAEYIT 166 (326)
T ss_dssp CCEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEEC--------TTCEEEE
T ss_pred cEEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEec--------CCCceEE
Confidence 37888789999999999975 479999976689999999999532 12 3331 1247999
Q ss_pred EecceecCCceeEEEEEecc-----CCeEEeeEEEEeEEE
Q 042447 242 LDTAYLRETANGLRIKTWQT-----SAVKISQIMYRNISG 276 (355)
Q Consensus 242 i~n~~~~~~~~gi~Ik~~~~-----~~~~i~nItf~NI~g 276 (355)
|++|.|.+-..+..+..... ..+++.+-.|.|+..
T Consensus 167 ISnn~f~~h~k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~ 206 (326)
T 3vmv_A 167 VSWNKFENHWKTMLVGHTDNASLAPDKITYHHNYFNNLNS 206 (326)
T ss_dssp EESCEEEEEEECEEECSSSCGGGCCEEEEEESCEEEEEEE
T ss_pred EEceEEecCceEEEECCCCCCcccCccEEEEeeEecCCcC
Confidence 99999998766666653211 124555555555543
No 65
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=95.68 E-value=0.042 Score=52.00 Aligned_cols=100 Identities=18% Similarity=0.158 Sum_probs=63.3
Q ss_pred ceeeec-CcccEEEEeeEEecC-----CceEEeec----CCccEEEEeeEEcCCc-e-EEeccCCcccc---cceEEEEE
Q 042447 177 DGIHIT-ESTNVVLQDCKIGTG-----DDCISIVN----GSSAIKMKRIFCGPGH-G-ISIGSLGKDNS---MGIVTKVV 241 (355)
Q Consensus 177 DGi~~~-~s~nv~I~n~~i~~g-----DD~I~ik~----g~~ni~i~n~~~~~~~-G-i~iGS~g~~~~---~~~v~nV~ 241 (355)
-||.+. .++||.|+|.+|+.. .|+|.+.. .+++|.|++|.+..+. . ...+....+.. .....+|+
T Consensus 86 ~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VT 165 (330)
T 2qy1_A 86 FGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVT 165 (330)
T ss_dssp SEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEE
T ss_pred eeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEE
Confidence 478887 789999999999753 69999976 6899999999994321 0 00111100000 11247999
Q ss_pred EecceecCCceeEEEEEec------cCCeEEeeEEEEeEEE
Q 042447 242 LDTAYLRETANGLRIKTWQ------TSAVKISQIMYRNISG 276 (355)
Q Consensus 242 i~n~~~~~~~~gi~Ik~~~------~~~~~i~nItf~NI~g 276 (355)
|++|.|.+...+..+.... ...+++.+-.|.++..
T Consensus 166 ISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~ 206 (330)
T 2qy1_A 166 VSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVES 206 (330)
T ss_dssp EESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEE
T ss_pred EEcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCC
Confidence 9999998766665554211 0234555556666543
No 66
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.65 E-value=0.3 Score=42.09 Aligned_cols=49 Identities=20% Similarity=0.483 Sum_probs=37.1
Q ss_pred ccEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEE-ecCCceEEeecCCccEEEE
Q 042447 158 ESVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKI-GTGDDCISIVNGSSAIKMK 213 (355)
Q Consensus 158 ~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i-~~gDD~I~ik~g~~ni~i~ 213 (355)
...+|+|+.|-.+ ..|||+... +.+|+|+++ ..++|++.+|. ...+.|.
T Consensus 52 ~GaTLkNvIIG~~----~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~ 101 (196)
T 3t9g_A 52 KGANLKNVIIGAP----GCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVI 101 (196)
T ss_dssp TTCEEEEEEECSC----CTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEE
T ss_pred CCCEEEEEEECCC----CcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEE
Confidence 6888999998542 458999964 689999999 46999999984 3344443
No 67
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=95.63 E-value=0.027 Score=54.95 Aligned_cols=98 Identities=20% Similarity=0.263 Sum_probs=64.0
Q ss_pred eeeecCcccEEEEeeEEecC--------------------CceEEeecCCccEEEEeeEEcCCc------eEEecc----
Q 042447 178 GIHITESTNVVLQDCKIGTG--------------------DDCISIVNGSSAIKMKRIFCGPGH------GISIGS---- 227 (355)
Q Consensus 178 Gi~~~~s~nv~I~n~~i~~g--------------------DD~I~ik~g~~ni~i~n~~~~~~~------Gi~iGS---- 227 (355)
||.+..++||.|+|.+|+.. .|+|.| .++++|.|++|.+..+. ...+|-
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i-~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~ 227 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISI-EGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQ 227 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEE-ESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEe-cCCceEEEEccEEecCCCcccccccccCcceee
Confidence 78887789999999999643 388998 57899999999996431 111110
Q ss_pred -CCcccccceEEEEEEecceecCCceeEEEEEecc-------CCeEEeeEEEEeEEE
Q 042447 228 -LGKDNSMGIVTKVVLDTAYLRETANGLRIKTWQT-------SAVKISQIMYRNISG 276 (355)
Q Consensus 228 -~g~~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~~-------~~~~i~nItf~NI~g 276 (355)
.|.-.......+|+|++|.|.+-..+..|..... ..+++.+-.|.|+..
T Consensus 228 ~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~ 284 (416)
T 1vbl_A 228 HDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQ 284 (416)
T ss_dssp CCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEE
T ss_pred cccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCcc
Confidence 0000001124799999999998766666643211 136777777777754
No 68
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=95.38 E-value=0.27 Score=42.44 Aligned_cols=42 Identities=19% Similarity=0.474 Sum_probs=35.1
Q ss_pred ccEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEEe-cCCceEEeec
Q 042447 158 ESVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIG-TGDDCISIVN 205 (355)
Q Consensus 158 ~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~-~gDD~I~ik~ 205 (355)
...+|+|+.|-.+ ..|||+... +.+|+|+++. .+.|++.+|+
T Consensus 48 ~GaTLkNvIIG~~----~~dGIHC~G--~CtleNVwwedVcEDA~T~k~ 90 (197)
T 1ee6_A 48 AGASLKNVVIGAP----AADGVHCYG--DCTITNVIWEDVGEDALTLKS 90 (197)
T ss_dssp TTEEEEEEEECSS----CTTCEEEES--CEEEEEEEESSCCSCSEEEEE
T ss_pred CCCEEEEEEEcCC----CcccEEEcC--ceeEEEEEeeeccccccEEcC
Confidence 6889999999653 568999975 5899999994 6999999985
No 69
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=95.37 E-value=0.15 Score=49.17 Aligned_cols=95 Identities=6% Similarity=0.173 Sum_probs=66.2
Q ss_pred CcccEEEEEEEEeCC-----CC--CCCCceeeecC-cccEEEEeeEEecCCceEEeecCCccEEEEeeEEc-CCceEEec
Q 042447 156 KSESVRVYQVLVSAP-----ED--SPNTDGIHITE-STNVVLQDCKIGTGDDCISIVNGSSAIKMKRIFCG-PGHGISIG 226 (355)
Q Consensus 156 ~~~nv~i~~v~I~~~-----~~--~~n~DGi~~~~-s~nv~I~n~~i~~gDD~I~ik~g~~ni~i~n~~~~-~~~Gi~iG 226 (355)
+..+|++++++|+.- +. ....-||.+.. +++++|++|.|...--+|.+ .++.+.+|+++++. .+.||.+-
T Consensus 134 r~s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~fGI~l-~~a~~~~I~~N~I~e~GNgI~L~ 212 (410)
T 2inu_A 134 RLSGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYLEHALIV-RGADALRVNDNMIAECGNCVELT 212 (410)
T ss_dssp CEECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESCSEEEEE-TTEESCEEESCEEESSSEEEEEC
T ss_pred ccCCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEecccEEEEE-ccCCCcEEECCEEEecCCceeec
Confidence 446777777777754 21 12245788875 78889999999888888888 57788889888886 46677662
Q ss_pred cCCcccccceEEEEEEecceecCCceeEEEEEe
Q 042447 227 SLGKDNSMGIVTKVVLDTAYLRETANGLRIKTW 259 (355)
Q Consensus 227 S~g~~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~ 259 (355)
.. .+...|+|+.+.....|-.|..|
T Consensus 213 G~--------~~~~~I~~N~i~~~~dG~gIyl~ 237 (410)
T 2inu_A 213 GA--------GQATIVSGNHMGAGPDGVTLLAE 237 (410)
T ss_dssp SC--------EESCEEESCEEECCTTSEEEEEE
T ss_pred cc--------cccceEecceeeecCCCCEEEEE
Confidence 21 24557888888888777444333
No 70
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=95.21 E-value=0.61 Score=44.45 Aligned_cols=138 Identities=12% Similarity=0.099 Sum_probs=75.7
Q ss_pred EEEE-eccCeEEecceEEECcCCccccCCC-CCCCcccEEEEEEEEeCCCCCCCCceee---ecCcccEEEEeeEEecCC
Q 042447 124 LDFS-KLNGVLFQGSGVIDGSGSKWWASSC-KKNKSESVRVYQVLVSAPEDSPNTDGIH---ITESTNVVLQDCKIGTGD 198 (355)
Q Consensus 124 i~~~-~~~ni~I~G~G~IdG~G~~~~~~~~-~~~~~~nv~i~~v~I~~~~~~~n~DGi~---~~~s~nv~I~n~~i~~gD 198 (355)
|.+. +.+||.|++--+-+++...-|.... .....++|.|+++++.... |+.- ...+++|+|++|.|....
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~-----d~~~~~~~~~s~~vTISnn~f~~~~ 200 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIG-----RQHIVLGTSADNRVTISYSLIDGRS 200 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEES-----SCSEEECSSCCEEEEEESCEEECBC
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccC-----cCceeecccccccEEEECcEecCCc
Confidence 3344 5677777764333333222222110 0112489999999987532 3422 346899999999996321
Q ss_pred -----------ceEEeecCCccEEEEeeEEcCCceEEeccCCcccccceEEEEEEecceecCC-ceeEEEEEeccCCeEE
Q 042447 199 -----------DCISIVNGSSAIKMKRIFCGPGHGISIGSLGKDNSMGIVTKVVLDTAYLRET-ANGLRIKTWQTSAVKI 266 (355)
Q Consensus 199 -----------D~I~ik~g~~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~-~~gi~Ik~~~~~~~~i 266 (355)
....+-..+.++++.++++..-. +..+....-..+++.|+++.+. .+++... ....+.+
T Consensus 201 ~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~-------~R~Pr~r~~~~~hv~NN~~~n~~~~a~~~~--~~~~i~~ 271 (359)
T 1qcx_A 201 DYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLS-------GRMPKVQGNTLLHAVNNLFHNFDGHAFEIG--TGGYVLA 271 (359)
T ss_dssp SSBTTSSSBBSCCEEECCSSEEEEEESCEEESBC-------SCTTEECSSEEEEEESCEEEEEEEEEEEEC--TTEEEEE
T ss_pred cccccCcccccceeEEecCCCCeehcccEeccCc-------ccCceecCCceEEEEccEEECccCeEEecC--CCceEEE
Confidence 24444344567888888774211 0000000013577888887763 3455443 2445677
Q ss_pred eeEEEEeEE
Q 042447 267 SQIMYRNIS 275 (355)
Q Consensus 267 ~nItf~NI~ 275 (355)
++-.|++..
T Consensus 272 e~N~F~~~~ 280 (359)
T 1qcx_A 272 EGNVFQDVN 280 (359)
T ss_dssp ESCEEEEEE
T ss_pred EeeEEECCC
Confidence 777887764
No 71
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=95.06 E-value=0.056 Score=52.42 Aligned_cols=97 Identities=16% Similarity=0.277 Sum_probs=62.7
Q ss_pred eeeecCcccEEEEeeEEecC--------------------CceEEeecCCccEEEEeeEEcCCc------eEEecc----
Q 042447 178 GIHITESTNVVLQDCKIGTG--------------------DDCISIVNGSSAIKMKRIFCGPGH------GISIGS---- 227 (355)
Q Consensus 178 Gi~~~~s~nv~I~n~~i~~g--------------------DD~I~ik~g~~ni~i~n~~~~~~~------Gi~iGS---- 227 (355)
||.+.. +||.|+|.+|+.. .|+|.+ .+++||.|++|.+..+. ...+|-
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i-~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~ 221 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITI-NGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQH 221 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEE-ESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEe-cCCCcEEEEeeeeecCCCccccccccccceeec
Confidence 788887 9999999999642 488999 57899999999996431 011110
Q ss_pred -CCcccccceEEEEEEecceecCCceeEEEEEecc-------CCeEEeeEEEEeEEE
Q 042447 228 -LGKDNSMGIVTKVVLDTAYLRETANGLRIKTWQT-------SAVKISQIMYRNISG 276 (355)
Q Consensus 228 -~g~~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~~-------~~~~i~nItf~NI~g 276 (355)
.|.-.......+|+|+||.|.+-..+..|..... ..+++.+-.|.|+..
T Consensus 222 ~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~ 278 (399)
T 2o04_A 222 HDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQ 278 (399)
T ss_dssp CCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEE
T ss_pred cccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcc
Confidence 0000001123799999999998766666643211 146666667777654
No 72
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=94.68 E-value=0.05 Score=52.05 Aligned_cols=66 Identities=18% Similarity=0.414 Sum_probs=50.2
Q ss_pred ceeeec-CcccEEEEeeEEec-------CCceEEeecCCccEEEEeeEEcC-Cce-EEeccCCcccccceEEEEEEecce
Q 042447 177 DGIHIT-ESTNVVLQDCKIGT-------GDDCISIVNGSSAIKMKRIFCGP-GHG-ISIGSLGKDNSMGIVTKVVLDTAY 246 (355)
Q Consensus 177 DGi~~~-~s~nv~I~n~~i~~-------gDD~I~ik~g~~ni~i~n~~~~~-~~G-i~iGS~g~~~~~~~v~nV~i~n~~ 246 (355)
.||.+. .++||.|+|++|+. ++|+|.+. ++++|.|++|.+.. +.+ +..|.. ...+|+|++|.
T Consensus 124 ~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~-~s~nVwIDHcs~s~~~d~~~~~g~~-------~s~~VTISnn~ 195 (359)
T 1idk_A 124 KGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLD-DCDLVWIDHVTTARIGRQHYVLGTS-------ADNRVSLTNNY 195 (359)
T ss_dssp CCEEECTTCEEEEEESCEEEEECTTEETSCCSEEEC-SCEEEEEESCEEEEESSCSEEECCC-------TTCEEEEESCE
T ss_pred ceEEEecCCCcEEEeCeEEEcccccccccCCceeec-CCCcEEEEeeEeecCCCCcEEeccc-------CcceEEEECcE
Confidence 368886 68999999999975 56999995 68999999999853 333 444322 13689999999
Q ss_pred ecCC
Q 042447 247 LRET 250 (355)
Q Consensus 247 ~~~~ 250 (355)
|.+.
T Consensus 196 f~~~ 199 (359)
T 1idk_A 196 IDGV 199 (359)
T ss_dssp EECB
T ss_pred ecCC
Confidence 9864
No 73
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=93.31 E-value=1.1 Score=41.81 Aligned_cols=68 Identities=19% Similarity=0.337 Sum_probs=48.1
Q ss_pred CeEEecceEEECcCCccccCCCCCC----Cc-----ccEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEEe-cCCce
Q 042447 131 GVLFQGSGVIDGSGSKWWASSCKKN----KS-----ESVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIG-TGDDC 200 (355)
Q Consensus 131 ni~I~G~G~IdG~G~~~~~~~~~~~----~~-----~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~-~gDD~ 200 (355)
.-+|.| +++||.+..| ...|... .+ ...+++|+.|-. ...|||+... -+.+|+|+++. .+.|+
T Consensus 124 ~~~i~g-~t~Dgg~k~~-~~~c~~q~E~q~~vF~le~GatlkNvIiG~----~~~dGIHC~~-G~CtleNVwwedVcEDA 196 (344)
T 3b4n_A 124 GATFEN-RTVDCGGVTI-GTSCPNDSDKQKPLIILKNATVKNLRISAS----GGADGIHCDS-GNCTIENVIWEDICEDA 196 (344)
T ss_dssp TEEEES-SEEECTTCEE-CCCCCTTCSCCCCSEEEESCEEEEEEECTT----CCTTCEEEEE-SEEEEEEEEESSCSSCS
T ss_pred ceeEec-ceEcCCCcEE-CCCCCCccccCccEEEEccCcEEEEEEecC----CCccceEEcc-CCeeEEEEeehhccccc
Confidence 456776 6899998885 4444211 11 567788888743 3568999972 36899999994 69999
Q ss_pred EEeec
Q 042447 201 ISIVN 205 (355)
Q Consensus 201 I~ik~ 205 (355)
+.+|.
T Consensus 197 ~T~kg 201 (344)
T 3b4n_A 197 ATNNG 201 (344)
T ss_dssp EEECS
T ss_pred ceecC
Confidence 99984
No 74
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=91.16 E-value=2.5 Score=40.53 Aligned_cols=57 Identities=19% Similarity=0.158 Sum_probs=41.3
Q ss_pred ccEEEEeeEEcCCceEEeccCCcccccceEEEEEEecceecCCceeEEEEEeccCCeEEeeEEEEeE
Q 042447 208 SAIKMKRIFCGPGHGISIGSLGKDNSMGIVTKVVLDTAYLRETANGLRIKTWQTSAVKISQIMYRNI 274 (355)
Q Consensus 208 ~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI 274 (355)
.|-.|+|+.....+|+.+|-.|+ .+.|+||++++|. ..|+.++ +..-.++||+.-+.
T Consensus 308 ~nHii~Ni~~~~~lGVG~~~DG~---~~~v~ni~~~dca----g~G~~~~---~~~~~ftNitvI~~ 364 (543)
T 3riq_A 308 TQHIIRNIITRDCMGIGAWWDGQ---KNIIDNVVTYEAH----KEGMFDR---GTNNDITNITVVCA 364 (543)
T ss_dssp CCCEEEEEEEESCSSCSSEECSS---SCEEEEEEEESCS----SCSEEEC---SSSCEEEEEEEESC
T ss_pred hhhhhhhhheeccceeeeeecCC---CCeEeeEEeeccc----cCcceee---ccCcceeeEEEEec
Confidence 57889999988888887777654 5689999999987 4566665 34446777766554
No 75
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=89.95 E-value=0.11 Score=50.19 Aligned_cols=40 Identities=35% Similarity=0.444 Sum_probs=30.6
Q ss_pred cCCCCCCCcchHHHHHHHHHHhhcCCCcEEEEcCCeEEEEeee
Q 042447 46 FGAAGDGVSDDTQAFLNAWNTACSTPKSVFLVPAGRHYLVSAT 88 (355)
Q Consensus 46 yGA~gDG~tDdT~Aiq~Ai~~a~~~gg~~V~iP~G~tY~i~~~ 88 (355)
=||+|||++|||+|+.+|+.+ .. ++.++=-.|.||.+..+
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~-~~--~~~~IDG~G~T~kVs~l 43 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALND-TP--VGQKINGNGKTYKVTSL 43 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHH-SC--TTSCEECTTCEEECSSC
T ss_pred CcccCCCccCcHHHHHHHhcc-CC--CCeEEeCCCceEEeeeC
Confidence 389999999999999999985 33 34455567778887654
No 76
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=88.15 E-value=2 Score=40.50 Aligned_cols=91 Identities=10% Similarity=0.145 Sum_probs=54.8
Q ss_pred ccEEEEeeEEcCCceEEeccCCcccccceEEEEEEecceecCCceeEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEE
Q 042447 208 SAIKMKRIFCGPGHGISIGSLGKDNSMGIVTKVVLDTAYLRETANGLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFA 287 (355)
Q Consensus 208 ~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~ 287 (355)
.|-.|+|+...++-|+.+|..|+ ..+|+||++++|. ..|..+.+.. -.++||++-+..--+-....|.|.
T Consensus 317 ~NHliDnllv~gsLGVG~GMDG~---G~YVSNitv~DCA----GsG~~~~t~~---~~FtNi~vID~N~~nF~adQi~I~ 386 (559)
T 2vfm_A 317 LNHLIDNLLVRGALGVGFGMDGK---GMYVSNITVEDCA----GSGAYLLTHE---SVFTNIAIIDTNTKDFQANQIYIS 386 (559)
T ss_dssp CCCEEEEEEEECCSSEEEEEEEE---SCEEEEEEEESCS----SEEEEEEEES---CEEEEEEEESCCTTCCSSCSEEEC
T ss_pred chhhhhhheeecccceeeeecCC---CceEeeeEehhcc----CcceEEeecc---ceeeeeEEEecccccCCcceEEEE
Confidence 57889999888877777776653 4689999999986 4566665432 256666665543222122346665
Q ss_pred cCCCCceeCEEEEeEEEEeCCCc
Q 042447 288 CSDTVPCSDIVLSNVNLEKKDGT 310 (355)
Q Consensus 288 ~~~~~~~~nI~~~nV~i~~~~g~ 310 (355)
+. --+..+++-.|.-+...|+
T Consensus 387 G~--C~VNGlR~~GIk~~~~~gl 407 (559)
T 2vfm_A 387 GA--CRVNGLRLIGIRSTDGQSL 407 (559)
T ss_dssp SS--CEEEEEEECCSCCCCSSCC
T ss_pred cc--eEEcceEEeeeccCCCCce
Confidence 42 2234455545444445555
No 77
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=88.09 E-value=1.7 Score=40.86 Aligned_cols=91 Identities=15% Similarity=0.199 Sum_probs=54.6
Q ss_pred ccEEEEeeEEcCCceEEeccCCcccccceEEEEEEecceecCCceeEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEE
Q 042447 208 SAIKMKRIFCGPGHGISIGSLGKDNSMGIVTKVVLDTAYLRETANGLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFA 287 (355)
Q Consensus 208 ~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~ 287 (355)
.|-.|+|+...++-|+.+|..|+ ..+|+||++++|. ..|..+.+.. -.++||++-+..--+-....|.|.
T Consensus 320 ~NHliDnllv~gsLGVG~GMDG~---G~YVSNitv~DCA----GsG~~~~t~~---~~FtNi~vID~N~~nF~adQi~I~ 389 (559)
T 2v5i_A 320 NNHLVDNILVMNSLGVGLGMDGS---GGYVSNVTVQDCA----GAGMLAHTYN---RVFSNITVIDCNYLNFDSDQIIII 389 (559)
T ss_dssp CCCEEEEEEEESCSSEEEEEEEE---SCEEEEEEEESCS----SEEEEEEEES---CEEEEEEEESCCTTCCSSCSEEEC
T ss_pred chhhhhhheeecccceeeeecCC---CceEeeeEehhcc----CcceEEeecc---ceeeeeEEEecccccCCcceEEEE
Confidence 57889999888877777776653 4689999999986 4566665432 256666665543222122346665
Q ss_pred cCCCCceeCEEEEeEEEEeCCCc
Q 042447 288 CSDTVPCSDIVLSNVNLEKKDGT 310 (355)
Q Consensus 288 ~~~~~~~~nI~~~nV~i~~~~g~ 310 (355)
+. --+..+++-.|.-+...|+
T Consensus 390 G~--C~VNGlR~~GIk~~~~~Gl 410 (559)
T 2v5i_A 390 GD--CIVNGIRAAGIKPQPSNGL 410 (559)
T ss_dssp SS--CEEEEEECCCSSCCCSSSC
T ss_pred cc--eEEcceEEeeeccCCCCce
Confidence 42 2233444444444445555
No 78
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=84.27 E-value=3.3 Score=40.45 Aligned_cols=57 Identities=14% Similarity=0.205 Sum_probs=40.4
Q ss_pred ccEEEEeeEEcCCceEEeccCCcccccceEEEEEEecceecCCceeEEEEEeccCCeEEeeEEEEeE
Q 042447 208 SAIKMKRIFCGPGHGISIGSLGKDNSMGIVTKVVLDTAYLRETANGLRIKTWQTSAVKISQIMYRNI 274 (355)
Q Consensus 208 ~ni~i~n~~~~~~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI 274 (355)
.|-.|+|+...++-|+.+|..|+ ..+|+||++++|. ..|..+.+.. -.++||++-+.
T Consensus 424 ~nhlidn~~v~~slgvg~gmdg~---g~yvsnitv~dca----g~g~~~~~~~---~~ftni~vid~ 480 (666)
T 2xc1_A 424 LNHLIDNLLVRGALGVGFGMDGK---GMYVSNITVEDCA----GSGAYLLTHE---SVFTNIAIIDT 480 (666)
T ss_dssp CCCEEEEEEEESCSSEEEEEEEE---SCEEEEEEEESCS----SEEEEEEEES---CEEEEEEEESC
T ss_pred chhhhhhheeecccceeeeecCC---CceEeeeEehhcc----CcceEEeecc---ceeeeeEEEec
Confidence 57889999888877777776653 4689999999986 4566665432 25666666554
No 79
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=83.30 E-value=6.4 Score=36.69 Aligned_cols=116 Identities=9% Similarity=0.071 Sum_probs=68.5
Q ss_pred eeecCcccEEEEeeEEecC-----CceEEeecCCccEEEEeeEEcC-CceEEeccCCcccccceEEEEEEecceecCCce
Q 042447 179 IHITESTNVVLQDCKIGTG-----DDCISIVNGSSAIKMKRIFCGP-GHGISIGSLGKDNSMGIVTKVVLDTAYLRETAN 252 (355)
Q Consensus 179 i~~~~s~nv~I~n~~i~~g-----DD~I~ik~g~~ni~i~n~~~~~-~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~ 252 (355)
+.+. +++++++|++|.|. ..+++|...+..+.+.||.+.+ ...+...+. + ..|+||++++.-.
T Consensus 89 v~v~-a~~f~~~nlt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~---------r-~~~~~c~I~G~vD 157 (319)
T 1gq8_A 89 VAAV-GAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSN---------R-QFFINCFIAGTVD 157 (319)
T ss_dssp EEEC-STTCEEEEEEEEECCCGGGCCCCSEEECCTTEEEEEEEEECSTTCEEECSS---------E-EEEESCEEEESSS
T ss_pred EEEE-CCCEEEEEeEeEccCCCcCCceEEEEecCCcEEEEEeEECccceeeeecCc---------c-EEEEecEEEeeee
Confidence 4443 57888888888762 3567776678999999999965 456766331 2 3899999987643
Q ss_pred eEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEEcCC-CCceeCEEEEeEEEEeCCC
Q 042447 253 GLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFACSD-TVPCSDIVLSNVNLEKKDG 309 (355)
Q Consensus 253 gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~~~~-~~~~~nI~~~nV~i~~~~g 309 (355)
-|. . .....++|.++............|.-++.. ...-..+.|.|.+|....+
T Consensus 158 FIf--G--~~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~ 211 (319)
T 1gq8_A 158 FIF--G--NAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSD 211 (319)
T ss_dssp CEE--E--SCEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTT
T ss_pred EEe--c--CCcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCC
Confidence 221 1 122344444443322100111234444432 2345689999999987653
No 80
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=79.77 E-value=7.7 Score=36.09 Aligned_cols=116 Identities=11% Similarity=0.092 Sum_probs=68.0
Q ss_pred eeecCcccEEEEeeEEecC-----CceEEeecCCccEEEEeeEEcC-CceEEeccCCcccccceEEEEEEecceecCCce
Q 042447 179 IHITESTNVVLQDCKIGTG-----DDCISIVNGSSAIKMKRIFCGP-GHGISIGSLGKDNSMGIVTKVVLDTAYLRETAN 252 (355)
Q Consensus 179 i~~~~s~nv~I~n~~i~~g-----DD~I~ik~g~~ni~i~n~~~~~-~~Gi~iGS~g~~~~~~~v~nV~i~n~~~~~~~~ 252 (355)
+.+. +++++++|++|.|. ..+++|...+..+.+.||.+.+ ...+...+. + -.|+||++++.-.
T Consensus 85 v~v~-a~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~---------r-~~~~~c~I~G~vD 153 (317)
T 1xg2_A 85 LAAV-GQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQ---------R-QFYRDSYVTGTVD 153 (317)
T ss_dssp EEEC-STTCEEESCEEEECCCGGGCCCCSEEECCTTEEEESCEEECSTTCEEECSS---------E-EEEESCEEEESSS
T ss_pred EEEE-CCCEEEEEeEEecccCCccCceEEEEEeCCcEEEEEeEeCccccceeecCc---------c-EEEEeeEEEecee
Confidence 4443 57888888888662 3567776678899999999965 456665331 2 3889999987632
Q ss_pred eEEEEEeccCCeEEeeEEEEeEEEeecCcccEEEEcCC-CCceeCEEEEeEEEEeCCC
Q 042447 253 GLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKFACSD-TVPCSDIVLSNVNLEKKDG 309 (355)
Q Consensus 253 gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i~~~~-~~~~~nI~~~nV~i~~~~g 309 (355)
=|. . .....++|.++............|.-++.. ...-..+.|.|.+|....+
T Consensus 154 FIf--G--~~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~ 207 (317)
T 1xg2_A 154 FIF--G--NAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSD 207 (317)
T ss_dssp CEE--E--CCEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTT
T ss_pred EEc--C--CceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCC
Confidence 211 1 122334444443322100112234445432 2345679999999987653
No 81
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=71.17 E-value=18 Score=35.90 Aligned_cols=93 Identities=4% Similarity=-0.007 Sum_probs=60.3
Q ss_pred ccEEEEEEEEeCCCCCCCCceeeecCcccEEEEeeEEec-C----CceEEeecCCccEEEEeeEEcCC--------ceEE
Q 042447 158 ESVRVYQVLVSAPEDSPNTDGIHITESTNVVLQDCKIGT-G----DDCISIVNGSSAIKMKRIFCGPG--------HGIS 224 (355)
Q Consensus 158 ~nv~i~~v~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-g----DD~I~ik~g~~ni~i~n~~~~~~--------~Gi~ 224 (355)
.+.+|++=++... ..||.+..+++..|++..|.. + ..||.+. +. +.+|+|+++... .||.
T Consensus 252 ~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~-~~-~~~I~nN~f~~~~g~~~~~~~GI~ 324 (506)
T 1dbg_A 252 QENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVW-GS-RHVIACNYFELSETIKSRGNAALY 324 (506)
T ss_dssp BSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSSCBCCEEEC-SB-SCEEESCEEEESSBCGGGTSEEEE
T ss_pred CCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCccCceEEEEE-CC-CCEEECCEEECCcCccccccccEE
Confidence 3456666555542 347888777778888888854 3 3678884 33 448888887432 2666
Q ss_pred eccCCcccccceEEEEEEecceecCCce-eEEEE
Q 042447 225 IGSLGKDNSMGIVTKVVLDTAYLRETAN-GLRIK 257 (355)
Q Consensus 225 iGS~g~~~~~~~v~nV~i~n~~~~~~~~-gi~Ik 257 (355)
|-.-........++++.|.+++|.++.. ||.+.
T Consensus 325 i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~ 358 (506)
T 1dbg_A 325 LNPGAMASEHALAFDMLIANNAFINVNGYAIHFN 358 (506)
T ss_dssp ECCBCTTSTTCCCBSEEEESCEEESCSSEEEESS
T ss_pred EecCCCccccccccCcEEECCEEECCccccEEEc
Confidence 6321100113456899999999999886 99998
No 82
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=60.21 E-value=1e+02 Score=28.74 Aligned_cols=112 Identities=7% Similarity=0.060 Sum_probs=63.1
Q ss_pred cccEEEEeeEEecC-------------------CceEEe--ecCCccEEEEeeEEcC-CceEEeccCCcccccceEEEEE
Q 042447 184 STNVVLQDCKIGTG-------------------DDCISI--VNGSSAIKMKRIFCGP-GHGISIGSLGKDNSMGIVTKVV 241 (355)
Q Consensus 184 s~nv~I~n~~i~~g-------------------DD~I~i--k~g~~ni~i~n~~~~~-~~Gi~iGS~g~~~~~~~v~nV~ 241 (355)
+++++++|.+|.|. ..+++| ...+..+.+.||.+.+ ...+-..+ .+..
T Consensus 95 a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~----------gr~~ 164 (342)
T 2nsp_A 95 AKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSG----------GRSF 164 (342)
T ss_dssp SBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECS----------SEEE
T ss_pred CCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECC----------CCEE
Confidence 46777777777542 245666 7778999999999965 45666532 1468
Q ss_pred EecceecCCceeEEEEEeccCCeEEeeEEEEeEEEeecCcc--cEEE--EcCCCCceeCEEEEeEEEEeCCC
Q 042447 242 LDTAYLRETANGLRIKTWQTSAVKISQIMYRNISGTTKSSK--AMKF--ACSDTVPCSDIVLSNVNLEKKDG 309 (355)
Q Consensus 242 i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~--~i~i--~~~~~~~~~nI~~~nV~i~~~~g 309 (355)
|+||+|+++-.= |-. .....++|.++........... ...| ...+...-..+.|.|.+|+...+
T Consensus 165 ~~~c~I~G~vDF--IFG--~a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~~~~~~~G~vf~~c~i~~~~~ 232 (342)
T 2nsp_A 165 FSDCRISGTVDF--IFG--DGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESD 232 (342)
T ss_dssp EESCEEEESEEE--EEE--SSEEEEESCEEEECCCTTSCTTSCCEEEEEECCBTTCSCCEEEESCEEEESST
T ss_pred EEcCEEEeceEE--EeC--CceEEEecCEEEEecCcccccccCceEEEccCCCCCCCCEEEEEcCEEecCCC
Confidence 999999876221 111 2223455544433321000000 0233 22222334578899999987644
No 83
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=47.60 E-value=69 Score=29.65 Aligned_cols=40 Identities=15% Similarity=0.351 Sum_probs=19.0
Q ss_pred EEEEEecceecCCc-eeEEEEEeccCCeEEeeEEEEeEEEee
Q 042447 238 TKVVLDTAYLRETA-NGLRIKTWQTSAVKISQIMYRNISGTT 278 (355)
Q Consensus 238 ~nV~i~n~~~~~~~-~gi~Ik~~~~~~~~i~nItf~NI~g~~ 278 (355)
.+|.++|+.|.++. -|+.+-..+..+ .=+...++.|+|+.
T Consensus 166 ~dvsv~~i~fsn~~g~gfsliayp~~~-~p~g~~i~~irg~y 206 (542)
T 2x3h_A 166 SDVTVSDVNFSNVKGTGFSLIAYPNDA-PPDGLMIKGIRGSY 206 (542)
T ss_dssp EEEEEEEEEEEEECSBEEEEEEECSSS-CCBSCEEEEEEEEE
T ss_pred CcceEeeeeeeecCCCceeEEEcCCCC-CCCceEEeccccce
Confidence 34555555555543 355555544222 22334455566554
No 84
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=40.99 E-value=49 Score=32.31 Aligned_cols=36 Identities=6% Similarity=0.111 Sum_probs=20.7
Q ss_pred cccEEEEeeEEe--c---------------CCceEEeecCCccEEEEeeEEcC
Q 042447 184 STNVVLQDCKIG--T---------------GDDCISIVNGSSAIKMKRIFCGP 219 (355)
Q Consensus 184 s~nv~I~n~~i~--~---------------gDD~I~ik~g~~ni~i~n~~~~~ 219 (355)
+++|.|++|+.. . -+..|.+...|+||+|+||++.-
T Consensus 178 fdnV~Vn~Vt~~v~~Sg~WTIhPi~Cqnvt~r~gL~f~eSCrNV~IsnC~FsV 230 (514)
T 2vbk_A 178 FDNVMVNEVETAYLMQGLWHSKFIACQAGTCRVGLHFLGQCVSVSVSSCHFSR 230 (514)
T ss_dssp EESCEEEEEEEEEEEESEEEEEEESCEEEEEEEEEEEESCCEEEEEESCEEEC
T ss_pred eeeEEEEeEEEeEeccCcEEEeEeccCceecccCccccCCCCeEEEeccEEec
Confidence 567788877541 1 11234444456777777777653
No 85
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=37.77 E-value=1.9e+02 Score=27.07 Aligned_cols=113 Identities=8% Similarity=0.059 Sum_probs=61.8
Q ss_pred cccEEEEeeEEecC-------------------CceEEeec--CCccEEEEeeEEcC-CceEEeccCCcccccceEEEEE
Q 042447 184 STNVVLQDCKIGTG-------------------DDCISIVN--GSSAIKMKRIFCGP-GHGISIGSLGKDNSMGIVTKVV 241 (355)
Q Consensus 184 s~nv~I~n~~i~~g-------------------DD~I~ik~--g~~ni~i~n~~~~~-~~Gi~iGS~g~~~~~~~v~nV~ 241 (355)
+++++++|+.|.|. ..+++|.- .+....+.||.+.+ ...+-.... .+..
T Consensus 121 a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~~---------gr~y 191 (364)
T 3uw0_A 121 APNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKTG---------SRSY 191 (364)
T ss_dssp STTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECTT---------CEEE
T ss_pred CCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCCC---------CCEE
Confidence 46777777777653 23455543 57889999999965 345655311 2458
Q ss_pred EecceecCCceeEEEEEeccCCeEEeeEEEEeEEEeecCcccEEE--EcCCCCceeCEEEEeEEEEeCCC
Q 042447 242 LDTAYLRETANGLRIKTWQTSAVKISQIMYRNISGTTKSSKAMKF--ACSDTVPCSDIVLSNVNLEKKDG 309 (355)
Q Consensus 242 i~n~~~~~~~~gi~Ik~~~~~~~~i~nItf~NI~g~~~~~~~i~i--~~~~~~~~~nI~~~nV~i~~~~g 309 (355)
|++|+|+++-.=| - ......++|.++............-.| ...+...-..+.|.|.+|+...+
T Consensus 192 f~~c~I~GtvDFI--F--G~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~~~~G~vf~~c~i~~~~~ 257 (364)
T 3uw0_A 192 FSDCEISGHVDFI--F--GSGITVFDNCNIVARDRSDIEPPYGYITAPSTLTTSPYGLIFINSRLTKEPG 257 (364)
T ss_dssp EESCEEEESEEEE--E--ESSEEEEESCEEEECCCSSCSSCCEEEEEECCCTTCSCCEEEESCEEEECTT
T ss_pred EEcCEEEcCCCEE--C--CcceEEEEeeEEEEeccCcccCCccEEEeCCcCCCCCcEEEEEeeEEecCCC
Confidence 9999998763211 1 122234555544332110000111222 22222334578999999987654
No 86
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=34.56 E-value=22 Score=31.86 Aligned_cols=24 Identities=13% Similarity=0.332 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhcCCCcEEEEcCCe
Q 042447 58 QAFLNAWNTACSTPKSVFLVPAGR 81 (355)
Q Consensus 58 ~Aiq~Ai~~a~~~gg~~V~iP~G~ 81 (355)
+.+.+.|.++|.++|.++|+|+|.
T Consensus 98 ~~l~~~L~~aA~~gg~~l~vpSGA 121 (253)
T 1j5p_A 98 EVFRERFFSELKNSPARVFFPSGA 121 (253)
T ss_dssp HHHHHHHHHHHHTCSCEEECCCTT
T ss_pred HHHHHHHHHHHHHCCCeEEecCCc
Confidence 456677888899899999999996
No 87
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=29.00 E-value=1.6e+02 Score=27.71 Aligned_cols=69 Identities=13% Similarity=0.245 Sum_probs=43.1
Q ss_pred CccEEEEeeEE-cCC-ceEEeccCC---------------cccccceEEEEEEecceecCCc-eeEEEEEeccCCeEEee
Q 042447 207 SSAIKMKRIFC-GPG-HGISIGSLG---------------KDNSMGIVTKVVLDTAYLRETA-NGLRIKTWQTSAVKISQ 268 (355)
Q Consensus 207 ~~ni~i~n~~~-~~~-~Gi~iGS~g---------------~~~~~~~v~nV~i~n~~~~~~~-~gi~Ik~~~~~~~~i~n 268 (355)
+.|+.+++... .+- .|+.+|+.. +|+...--.|-.++|..+.++. -|+.+. +.++.++|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMD---G~G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMD---GKGMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEE---EESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeec---CCCceEee
Confidence 56777777765 333 378887641 1111222245566777766664 466665 57789999
Q ss_pred EEEEeEEEee
Q 042447 269 IMYRNISGTT 278 (355)
Q Consensus 269 Itf~NI~g~~ 278 (355)
|+++++.|..
T Consensus 346 itv~DCAGsG 355 (559)
T 2vfm_A 346 ITVEDCAGSG 355 (559)
T ss_dssp EEEESCSSEE
T ss_pred eEehhccCcc
Confidence 9999997653
No 88
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=24.45 E-value=9.7 Score=27.83 Aligned_cols=31 Identities=13% Similarity=0.289 Sum_probs=21.2
Q ss_pred cccccccccceeccCCCcccccCCCceEEEeeecC
Q 042447 13 ENLNVEEENEVELFEEPSWTSERGGKVLVNVDSFG 47 (355)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nV~dyG 47 (355)
+.+..+++..+.+++.++-+.| .+|-|.|||
T Consensus 33 eAl~~A~e~~LDLVevsp~a~P----PVCkImDyg 63 (78)
T 1tif_A 33 EALEIAARRNLDLVLVAPNAKP----PVCRIMDYG 63 (78)
T ss_dssp HHHHHHHHTTCEEEEEETTSSS----CEEEEECHH
T ss_pred HHHHHHHHcCCCEEEECCCCCC----CEEEEecch
Confidence 3455666677777777654433 389999998
No 89
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=22.52 E-value=2.4e+02 Score=27.76 Aligned_cols=69 Identities=13% Similarity=0.243 Sum_probs=42.8
Q ss_pred CccEEEEeeEEc-CC-ceEEeccCC---------------cccccceEEEEEEecceecCCc-eeEEEEEeccCCeEEee
Q 042447 207 SSAIKMKRIFCG-PG-HGISIGSLG---------------KDNSMGIVTKVVLDTAYLRETA-NGLRIKTWQTSAVKISQ 268 (355)
Q Consensus 207 ~~ni~i~n~~~~-~~-~Gi~iGS~g---------------~~~~~~~v~nV~i~n~~~~~~~-~gi~Ik~~~~~~~~i~n 268 (355)
+.|+.+++...- +- .|+.+|+.. +|+...--.|-.++|..+.++. -|+.+. +.++.++|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmd---g~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMD---GKGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEE---EESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeec---CCCceEee
Confidence 567788777653 32 378887641 1111122245566676666664 466665 56789999
Q ss_pred EEEEeEEEee
Q 042447 269 IMYRNISGTT 278 (355)
Q Consensus 269 Itf~NI~g~~ 278 (355)
|+++++.|..
T Consensus 453 itv~dcag~g 462 (666)
T 2xc1_A 453 ITVEDCAGSG 462 (666)
T ss_dssp EEEESCSSEE
T ss_pred eEehhccCcc
Confidence 9999997643
No 90
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=21.07 E-value=1.1e+02 Score=25.01 Aligned_cols=15 Identities=27% Similarity=0.636 Sum_probs=11.2
Q ss_pred EcCCeEEEEeeeeee
Q 042447 77 VPAGRHYLVSATRFK 91 (355)
Q Consensus 77 iP~G~tY~i~~~~l~ 91 (355)
||+|++|++..+...
T Consensus 104 Lp~G~Yyl~a~v~w~ 118 (150)
T 3qec_A 104 IPNGTYYISSELTWS 118 (150)
T ss_dssp ECSEEEEEEEEEEEE
T ss_pred CCCccEEEEEEEEec
Confidence 899997777766554
Done!