BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042449
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17639|EMB1_DAUCA EMB-1 protein OS=Daucus carota GN=EMB-1 PE=2 SV=1
Length = 92
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 1 MASQQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MASQQ ++ELD R RQGETVVPGGTGGKSLEAQ+HLAEG S
Sbjct: 1 MASQQEKKELDARARQGETVVPGGTGGKSLEAQQHLAEGRS 41
>sp|P11573|SEEP_RAPSA Late seed maturation protein P8B6 OS=Raphanus sativus PE=2 SV=1
Length = 83
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 1 MASQQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MASQQ +++LD R ++GETVVPGGTGGKS EAQ+HLAEG S
Sbjct: 1 MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRS 41
>sp|Q02973|EM6_ARATH Em-like protein GEA6 OS=Arabidopsis thaliana GN=EM6 PE=1 SV=1
Length = 92
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 1 MASQQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MASQQ +++LD R ++GETVVPGGTGGKS EAQ+HLAEG S
Sbjct: 1 MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRS 41
>sp|P46517|EMB5_MAIZE Late embryogenesis abundant protein EMB564 OS=Zea mays PE=2 SV=1
Length = 91
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
Query: 1 MAS-QQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MAS Q+ R+ELD + R+GETVVPGGTGGKS+EAQEHLAEG S
Sbjct: 1 MASGQESRKELDRKAREGETVVPGGTGGKSVEAQEHLAEGRS 42
>sp|Q07187|EM1_ARATH Em-like protein GEA1 OS=Arabidopsis thaliana GN=EM1 PE=1 SV=1
Length = 152
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 1 MASQQ-GRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFSGKNHVVAKRLVANDSIST 59
MAS+Q R+ELD + +QGETVVPGGTGG SLEAQEHLAEG S K K + ++
Sbjct: 1 MASKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRS-KGGQTRKEQLGHEGYQE 59
Query: 60 SVHSTCRVSHARLVH 74
H +L H
Sbjct: 60 IGHKGGEARKEQLGH 74
>sp|Q40864|EML_PICGL Em-like protein OS=Picea glauca PE=3 SV=1
Length = 91
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 34/41 (82%)
Query: 1 MASQQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
M QQ R+ELD + R+GETVVPGGTGGKSL+AQE LAEG S
Sbjct: 1 MEQQQDRRELDAKAREGETVVPGGTGGKSLDAQERLAEGRS 41
>sp|P46520|EMP1_ORYSJ Embryonic abundant protein 1 OS=Oryza sativa subsp. japonica
GN=EMP1 PE=2 SV=1
Length = 95
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 36/44 (81%), Gaps = 3/44 (6%)
Query: 1 MAS---QQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MAS QQGR ELD R+G+TVVPGGTGGKSLEAQE+LAEG S
Sbjct: 1 MASGQQQQGRSELDRMAREGQTVVPGGTGGKSLEAQENLAEGRS 44
>sp|P42755|EM4_WHEAT Em protein H5 OS=Triticum aestivum GN=EMH5 PE=2 SV=1
Length = 93
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Query: 1 MAS-QQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MAS QQ R ELD R+GETVVPGGTGGKSLEAQEHLA+G S
Sbjct: 1 MASGQQERSELDRMAREGETVVPGGTGGKSLEAQEHLADGRS 42
>sp|Q02400|LE193_HORVU Late embryogenesis abundant protein B19.3 OS=Hordeum vulgare
GN=B19.3 PE=2 SV=1
Length = 133
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Query: 1 MAS-QQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MAS QQ R ELD R+GETVVPGGTGGK+LEAQEHLAEG S
Sbjct: 1 MASGQQERSELDRMAREGETVVPGGTGGKTLEAQEHLAEGRS 42
>sp|Q05191|LE194_HORVU Late embryogenesis abundant protein B19.4 OS=Hordeum vulgare
GN=B19.4 PE=2 SV=1
Length = 153
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Query: 1 MAS-QQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MAS QQ R ELD R+GETVVPGGTGGK+LEAQEHLAEG S
Sbjct: 1 MASGQQERSELDRMAREGETVVPGGTGGKTLEAQEHLAEGRS 42
>sp|P04568|EM1_WHEAT Em protein OS=Triticum aestivum GN=EM PE=2 SV=1
Length = 93
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Query: 1 MAS-QQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MAS QQ R +LD + R+GETVVPGGTGGKSLEAQE+LAEG S
Sbjct: 1 MASGQQERSQLDRKAREGETVVPGGTGGKSLEAQENLAEGRS 42
>sp|Q05190|LE19A_HORVU Late embryogenesis abundant protein B19.1A OS=Hordeum vulgare
GN=B19.1A PE=2 SV=1
Length = 93
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Query: 1 MAS-QQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MAS QQ R +LD + R+GETVVPGGTGGKSLEAQ++LAEG S
Sbjct: 1 MASGQQERSQLDRKAREGETVVPGGTGGKSLEAQQNLAEGRS 42
>sp|Q08000|EM3_WHEAT Em protein H2 OS=Triticum aestivum GN=EMH2 PE=2 SV=1
Length = 93
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Query: 1 MAS-QQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MAS QQ R +LD + R+GETVVPGGTGGKSLEA E+LAEG S
Sbjct: 1 MASGQQERSQLDRKAREGETVVPGGTGGKSLEAHENLAEGRS 42
>sp|P22701|EM2_WHEAT Em protein CS41 OS=Triticum aestivum GN=EM PE=2 SV=1
Length = 94
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
Query: 1 MAS--QQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MAS ++GR ELD+ R+G+TVVPGGTGGKS EAQE LAEG S
Sbjct: 1 MASGQEKGRSELDSLAREGQTVVPGGTGGKSYEAQEKLAEGRS 43
>sp|P46532|LE19B_HORVU Late embryogenesis abundant protein B19.1B OS=Hordeum vulgare
GN=B19.1B PE=3 SV=1
Length = 93
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Query: 1 MAS-QQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MAS QQ R +LD + R+GETVVPGGTGGKSLEA ++LAEG S
Sbjct: 1 MASGQQERSQLDRKAREGETVVPGGTGGKSLEAHDNLAEGRS 42
>sp|P46514|LE10_HELAN 10 kDa late embryogenesis abundant protein OS=Helianthus annuus
PE=2 SV=2
Length = 92
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 35/51 (68%), Gaps = 10/51 (19%)
Query: 1 MASQQGRQ----------ELDTRPRQGETVVPGGTGGKSLEAQEHLAEGFS 41
MASQQG+Q +LD R +GETVVPGGT GKSLEAQE LAEG S
Sbjct: 1 MASQQGQQTRKIPEQEKKDLDQRAAKGETVVPGGTRGKSLEAQERLAEGRS 51
>sp|P09443|LE19_GOSHI Late embryogenesis abundant protein D-19 OS=Gossypium hirsutum
PE=2 SV=2
Length = 102
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 2 ASQQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEG 39
A Q+ ++ELD R +QGETVVPGGT GKSL+AQ +LAEG
Sbjct: 12 APQEEKEELDARAKQGETVVPGGTRGKSLDAQINLAEG 49
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,715,517
Number of Sequences: 539616
Number of extensions: 1272721
Number of successful extensions: 2963
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2943
Number of HSP's gapped (non-prelim): 22
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)