Query 042449
Match_columns 90
No_of_seqs 38 out of 40
Neff 1.5
Searched_HMMs 13730
Date Mon Mar 25 10:35:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042449.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/042449hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3cpta1 d.110.7.1 (A:3-118) ME 37.6 10 0.00074 24.0 2.5 23 64-86 70-92 (116)
2 d1t7va1 b.1.1.2 (A:184-277) Zi 32.8 4.6 0.00033 22.6 0.1 10 63-72 75-84 (94)
3 d2ilaa_ b.42.1.2 (A:) Interleu 32.3 8.7 0.00063 25.3 1.5 18 68-85 127-144 (148)
4 d3frua1 b.1.1.2 (A:179-269) Fc 29.7 5.5 0.0004 22.5 0.1 11 63-73 74-84 (91)
5 d1lk2b_ b.1.1.2 (B:) beta2-mic 28.2 6 0.00044 22.3 0.1 10 63-72 78-87 (99)
6 d2h26a1 b.1.1.2 (A:184-279) CD 23.8 8.3 0.00061 21.9 0.1 10 63-72 76-85 (96)
7 d1qora2 c.2.1.1 (A:113-291) Qu 23.8 12 0.00087 21.8 0.9 20 13-32 25-45 (179)
8 d1k5na1 b.1.1.2 (A:182-276) Cl 23.6 8.6 0.00062 21.6 0.2 10 63-72 76-85 (95)
9 d2fuea1 c.108.1.10 (A:13-256) 23.4 24 0.0018 19.6 2.2 34 4-39 21-54 (244)
10 d1l6xa2 b.1.1.2 (A:342-443) Im 22.7 8.9 0.00064 21.4 0.1 10 63-72 82-91 (102)
11 d1de4a1 b.1.1.2 (A:182-275) He 22.3 9.1 0.00066 21.8 0.1 10 63-72 77-86 (94)
12 d1uvqb1 b.1.1.2 (B:95-191) Cla 21.3 10 0.00074 21.5 0.2 10 63-72 77-86 (97)
13 d2mhaa1 b.1.1.2 (A:182-270) Cl 21.2 11 0.00079 20.9 0.3 10 63-72 76-85 (89)
14 d1uvqa1 b.1.1.2 (A:85-183) Cla 20.8 10 0.00074 21.7 0.1 10 63-72 80-89 (99)
15 d1muja1 b.1.1.2 (A:84-183) Cla 20.7 10 0.00075 21.9 0.1 10 63-72 78-87 (100)
16 d1hdma1 b.1.1.2 (A:94-196) Cla 20.2 9.8 0.00071 22.1 -0.1 10 63-72 78-87 (103)
No 1
>d3cpta1 d.110.7.1 (A:3-118) MEK binding partner 1, MP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.64 E-value=10 Score=23.95 Aligned_cols=23 Identities=22% Similarity=0.447 Sum_probs=18.8
Q ss_pred ceecccceeeeecCCCeeEEEec
Q 042449 64 TCRVSHARLVHMNRGPQLLTIFF 86 (90)
Q Consensus 64 tcrvsharlvhmnrgpqlltiff 86 (90)
.|..+..-+||+|+-|-.+|++-
T Consensus 70 i~~Y~~~qvv~~~~~pl~vt~ia 92 (116)
T d3cpta1 70 ICYYNTYQVVQFNRLPLVVSFIA 92 (116)
T ss_dssp EEECSSEEEEEEEETTEEEEEEE
T ss_pred EEEecCeEEEEEecCceEEEEEe
Confidence 58888889999999997776543
No 2
>d1t7va1 b.1.1.2 (A:184-277) Zinc-alpha-2-glycoprotein, ZAG, alpha-3 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.81 E-value=4.6 Score=22.59 Aligned_cols=10 Identities=40% Similarity=0.873 Sum_probs=8.1
Q ss_pred cceeccccee
Q 042449 63 STCRVSHARL 72 (90)
Q Consensus 63 stcrvsharl 72 (90)
-+|+|.|.-|
T Consensus 75 ytC~V~H~sl 84 (94)
T d1t7va1 75 YSCHVQHSSL 84 (94)
T ss_dssp EEEEEEETTC
T ss_pred EEEEEEECCC
Confidence 4799999865
No 3
>d2ilaa_ b.42.1.2 (A:) Interleukin-1alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.28 E-value=8.7 Score=25.31 Aligned_cols=18 Identities=28% Similarity=0.418 Sum_probs=15.0
Q ss_pred ccceeeeecCCCeeEEEe
Q 042449 68 SHARLVHMNRGPQLLTIF 85 (90)
Q Consensus 68 sharlvhmnrgpqlltif 85 (90)
|....|||.||++-+|-|
T Consensus 127 s~~~~v~l~rg~~~itdF 144 (148)
T d2ilaa_ 127 KQDYWVCLAGGPPSITDF 144 (148)
T ss_pred cccceeEeccCCCccccE
Confidence 456789999999988766
No 4
>d3frua1 b.1.1.2 (A:179-269) Fc (IgG) receptor, alpha-3 domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=29.70 E-value=5.5 Score=22.52 Aligned_cols=11 Identities=36% Similarity=0.721 Sum_probs=8.7
Q ss_pred cceecccceee
Q 042449 63 STCRVSHARLV 73 (90)
Q Consensus 63 stcrvsharlv 73 (90)
-+|+|.|.-|-
T Consensus 74 ytC~V~H~sL~ 84 (91)
T d3frua1 74 YQCQVEHEGLA 84 (91)
T ss_dssp EEEEEECTTSS
T ss_pred EEEEEEeCCCC
Confidence 47999998663
No 5
>d1lk2b_ b.1.1.2 (B:) beta2-microglobulin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.21 E-value=6 Score=22.33 Aligned_cols=10 Identities=40% Similarity=0.889 Sum_probs=8.1
Q ss_pred cceeccccee
Q 042449 63 STCRVSHARL 72 (90)
Q Consensus 63 stcrvsharl 72 (90)
-||+|.|.-|
T Consensus 78 ytC~V~H~sl 87 (99)
T d1lk2b_ 78 YACRVKHDSM 87 (99)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEEeCCC
Confidence 5899999754
No 6
>d2h26a1 b.1.1.2 (A:184-279) CD1, alpha-3 domain {Human (Homo sapiens), CD1a [TaxId: 9606]}
Probab=23.82 E-value=8.3 Score=21.89 Aligned_cols=10 Identities=50% Similarity=0.999 Sum_probs=8.1
Q ss_pred cceeccccee
Q 042449 63 STCRVSHARL 72 (90)
Q Consensus 63 stcrvsharl 72 (90)
-||+|.|.-|
T Consensus 76 ytC~V~H~sL 85 (96)
T d2h26a1 76 LSCRVKHSSL 85 (96)
T ss_dssp EEEEEEEGGG
T ss_pred EEEEEEeCCC
Confidence 4799999765
No 7
>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}
Probab=23.80 E-value=12 Score=21.81 Aligned_cols=20 Identities=25% Similarity=0.340 Sum_probs=13.4
Q ss_pred cccCCCee-ecCCCCCCchHH
Q 042449 13 RPRQGETV-VPGGTGGKSLEA 32 (90)
Q Consensus 13 rAr~GETV-VpGGTGGkSLeA 32 (90)
+.+.||+| |-||.||--+-+
T Consensus 25 ~l~~g~~Vlv~ga~g~vG~~~ 45 (179)
T d1qora2 25 EIKPDEQFLFHAAAGGVGLIA 45 (179)
T ss_dssp CCCTTCEEEESSTTBHHHHHH
T ss_pred CCCCCCEEEEEccccccchHH
Confidence 35679997 677877554433
No 8
>d1k5na1 b.1.1.2 (A:182-276) Class I MHC, alpha-3 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.65 E-value=8.6 Score=21.56 Aligned_cols=10 Identities=50% Similarity=0.843 Sum_probs=8.1
Q ss_pred cceeccccee
Q 042449 63 STCRVSHARL 72 (90)
Q Consensus 63 stcrvsharl 72 (90)
-+|+|.|.-|
T Consensus 76 ytC~V~H~~L 85 (95)
T d1k5na1 76 YTCHVQHEGL 85 (95)
T ss_dssp EEEEEECTTC
T ss_pred EEEEEEECcC
Confidence 4899999765
No 9
>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.40 E-value=24 Score=19.60 Aligned_cols=34 Identities=18% Similarity=0.145 Sum_probs=25.5
Q ss_pred hhchhhhhhcccCCCeeecCCCCCCchHHHHHHhhc
Q 042449 4 QQGRQELDTRPRQGETVVPGGTGGKSLEAQEHLAEG 39 (90)
Q Consensus 4 qq~R~ELD~rAr~GETVVpGGTGGkSLeAQe~LAEG 39 (90)
++.++.|.+..+.|-.|+. |||........+++.
T Consensus 21 ~~~~~~i~~l~~~g~~~i~--tgrr~~~~~~~~~~~ 54 (244)
T d2fuea1 21 PEVAAFLQKLRSRVQIGVV--GGSDYCKIAEQLGDG 54 (244)
T ss_dssp HHHHHHHHHHTTTSEEEEE--CSSCHHHHHHHHSST
T ss_pred HHHHHHHHHHHhCCCEEEE--ecCChhhhhhhhhhh
Confidence 4557778877777876665 899988888888763
No 10
>d1l6xa2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.67 E-value=8.9 Score=21.36 Aligned_cols=10 Identities=40% Similarity=0.713 Sum_probs=7.7
Q ss_pred cceeccccee
Q 042449 63 STCRVSHARL 72 (90)
Q Consensus 63 stcrvsharl 72 (90)
-+|+|.|.-|
T Consensus 82 ytC~V~H~~l 91 (102)
T d1l6xa2 82 FSCSVMHEAL 91 (102)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEEeCCC
Confidence 4799999654
No 11
>d1de4a1 b.1.1.2 (A:182-275) Hemochromatosis protein Hfe, alpha-3 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.28 E-value=9.1 Score=21.79 Aligned_cols=10 Identities=50% Similarity=0.883 Sum_probs=8.1
Q ss_pred cceeccccee
Q 042449 63 STCRVSHARL 72 (90)
Q Consensus 63 stcrvsharl 72 (90)
-||+|.|.-|
T Consensus 77 ytC~V~H~sl 86 (94)
T d1de4a1 77 YTCQVEHPGL 86 (94)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEEeCCC
Confidence 4799999855
No 12
>d1uvqb1 b.1.1.2 (B:95-191) Class II MHC beta chain, C-terminal domain {Human (Homo sapiens), HLA-DQ group [TaxId: 9606]}
Probab=21.30 E-value=10 Score=21.45 Aligned_cols=10 Identities=50% Similarity=0.879 Sum_probs=8.1
Q ss_pred cceeccccee
Q 042449 63 STCRVSHARL 72 (90)
Q Consensus 63 stcrvsharl 72 (90)
-+|+|.|.-|
T Consensus 77 ytC~V~H~sl 86 (97)
T d1uvqb1 77 YTCHVEHPSL 86 (97)
T ss_dssp EEEEEECTTC
T ss_pred EEEEEEeCCC
Confidence 4799999865
No 13
>d2mhaa1 b.1.1.2 (A:182-270) Class I MHC, alpha-3 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.20 E-value=11 Score=20.93 Aligned_cols=10 Identities=50% Similarity=0.766 Sum_probs=8.3
Q ss_pred cceeccccee
Q 042449 63 STCRVSHARL 72 (90)
Q Consensus 63 stcrvsharl 72 (90)
-+|.|.|.-|
T Consensus 76 ytC~V~H~~L 85 (89)
T d2mhaa1 76 YTCHVYHQGL 85 (89)
T ss_dssp CEEEEECSSC
T ss_pred EEEEEEECCC
Confidence 5899999865
No 14
>d1uvqa1 b.1.1.2 (A:85-183) Class II MHC alpha chain, C-terminal domain {Human (Homo sapiens), HLA-DQ group [TaxId: 9606]}
Probab=20.84 E-value=10 Score=21.69 Aligned_cols=10 Identities=40% Similarity=0.710 Sum_probs=7.9
Q ss_pred cceeccccee
Q 042449 63 STCRVSHARL 72 (90)
Q Consensus 63 stcrvsharl 72 (90)
-+|+|.|.-|
T Consensus 80 ytC~V~H~sl 89 (99)
T d1uvqa1 80 YDCKVEHWGL 89 (99)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEEeCCC
Confidence 4799999754
No 15
>d1muja1 b.1.1.2 (A:84-183) Class II MHC alpha chain, C-terminal domain {Mouse (Mus musculus), I-A group [TaxId: 10090]}
Probab=20.66 E-value=10 Score=21.85 Aligned_cols=10 Identities=40% Similarity=0.710 Sum_probs=8.2
Q ss_pred cceeccccee
Q 042449 63 STCRVSHARL 72 (90)
Q Consensus 63 stcrvsharl 72 (90)
-+|+|.|.-|
T Consensus 78 ytC~V~H~sl 87 (100)
T d1muja1 78 YDCKVEHWGL 87 (100)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEEECCC
Confidence 4899999865
No 16
>d1hdma1 b.1.1.2 (A:94-196) Class II MHC alpha chain, C-terminal domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}
Probab=20.16 E-value=9.8 Score=22.14 Aligned_cols=10 Identities=30% Similarity=0.461 Sum_probs=8.2
Q ss_pred cceeccccee
Q 042449 63 STCRVSHARL 72 (90)
Q Consensus 63 stcrvsharl 72 (90)
-+|+|.|.-|
T Consensus 78 ytC~V~H~~l 87 (103)
T d1hdma1 78 FSCIVTHEPD 87 (103)
T ss_dssp EEEEEEETTT
T ss_pred EEEEEEeCCC
Confidence 5799999865
Done!