Query 042451
Match_columns 529
No_of_seqs 39 out of 41
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 10:37:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042451.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/042451hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1w6sa_ b.70.1.1 (A:) Methanol 18.6 48 0.0035 32.7 4.6 45 452-496 477-532 (596)
2 d1flga_ b.70.1.1 (A:) Ethanol 15.0 76 0.0055 30.7 5.1 43 452-495 490-544 (582)
3 d1kv9a2 b.70.1.1 (A:1-560) Qui 15.0 70 0.0051 30.9 4.8 64 420-496 443-517 (560)
4 d2ad6a1 b.70.1.1 (A:1-571) Met 15.0 62 0.0045 31.5 4.4 44 452-495 468-522 (571)
5 d1acoa1 c.8.2.1 (A:529-754) Ac 14.7 26 0.0019 31.4 1.4 14 458-471 100-113 (226)
6 d1kb0a2 b.70.1.1 (A:1-573) Qui 10.6 92 0.0067 30.0 4.1 45 452-496 481-536 (573)
7 d2b3ya1 c.8.2.1 (A:631-889) ro 10.3 44 0.0032 30.7 1.4 12 460-471 136-147 (259)
8 d2p3ha1 d.145.1.4 (A:5-102) Un 9.5 1.3E+02 0.0096 23.1 3.9 22 311-344 76-97 (98)
9 d1cf1a2 b.1.18.11 (A:183-393) 8.9 1.6E+02 0.011 25.6 4.6 46 277-322 11-64 (211)
10 d1m7xa3 c.1.8.1 (A:227-622) 1, 5.4 1E+02 0.0073 26.2 1.3 18 455-472 332-350 (396)
No 1
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=18.60 E-value=48 Score=32.66 Aligned_cols=45 Identities=18% Similarity=0.378 Sum_probs=34.6
Q ss_pred CCCcccCCceEEccccCCC---------eeEEee--CcccCCceEEEEEeeEEEEE
Q 042451 452 NRPFTKSGGLVFGRDEYGE---------GVTWRL--SREMEGSVLKWRIGGQIWLS 496 (529)
Q Consensus 452 ~rPFTk~GGVvFaGdEyge---------~v~WR~--~k~~eGktm~W~I~G~iw~T 496 (529)
.-|.+..|||||+|+--|. ++.|++ +....+.-|-+++.|+-++.
T Consensus 477 gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQYva 532 (596)
T d1w6sa_ 477 GGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVA 532 (596)
T ss_dssp SBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred cceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEEEEE
Confidence 5578999999999975332 456776 55778888999999987665
No 2
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=15.05 E-value=76 Score=30.73 Aligned_cols=43 Identities=21% Similarity=0.557 Sum_probs=30.5
Q ss_pred CCCcccCCceEEccc----------cCCCeeEEeeC--cccCCceEEEEEeeEEEE
Q 042451 452 NRPFTKSGGLVFGRD----------EYGEGVTWRLS--REMEGSVLKWRIGGQIWL 495 (529)
Q Consensus 452 ~rPFTk~GGVvFaGd----------Eyge~v~WR~~--k~~eGktm~W~I~G~iw~ 495 (529)
.=|.+..|||||+|+ |-|| +.|++. ...-|.-|-+++.|+-++
T Consensus 490 ~g~lstagglVF~Gt~dg~l~A~Da~TGe-~LW~~~~~~~~~~~P~ty~~~G~qYv 544 (582)
T d1flga_ 490 AGVLATAGNLVFTGTGDGYFKAFDAKSGK-ELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp SCCEEETTTEEEEECTTSEEEEEETTTCC-EEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cceeEEcCCeEEEeCCCCeEEEEECCCCc-EeEEEECCCCccccCEEEEECCEEEE
Confidence 447889999999995 3344 447654 455666788999997554
No 3
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=15.00 E-value=70 Score=30.90 Aligned_cols=64 Identities=13% Similarity=0.281 Sum_probs=41.0
Q ss_pred ecCCCceeeccccCCCCCCCCCccccccCCCCCCCcccCCceEEccccCCC---------eeEEeeC--cccCCceEEEE
Q 042451 420 CDNTTGQEFPTWKCDNNGDGGSRSFKNRYSGANRPFTKSGGLVFGRDEYGE---------GVTWRLS--REMEGSVLKWR 488 (529)
Q Consensus 420 ~D~~~g~ev~s~kp~~~~~~pr~~f~~Ry~~~~rPFTk~GGVvFaGdEyge---------~v~WR~~--k~~eGktm~W~ 488 (529)
+|..+|+.+-...- ..+.-.-+.+..|||||+|+--|. ++.|++. ...-|.-|-++
T Consensus 443 ~D~~tGk~~W~~~~-------------~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~ 509 (560)
T d1kv9a2 443 WDPVKQKAAWKVPY-------------PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFE 509 (560)
T ss_dssp EETTTTEEEEEEEE-------------SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred EeCCCCeEeeeccC-------------CCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEE
Confidence 67788776654321 111224578899999999964332 3447654 44567778999
Q ss_pred EeeEEEEE
Q 042451 489 IGGQIWLS 496 (529)
Q Consensus 489 I~G~iw~T 496 (529)
+.|+-++.
T Consensus 510 ~dGkqyv~ 517 (560)
T d1kv9a2 510 LAGRQYVA 517 (560)
T ss_dssp ETTEEEEE
T ss_pred ECCEEEEE
Confidence 99987764
No 4
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=14.97 E-value=62 Score=31.47 Aligned_cols=44 Identities=20% Similarity=0.379 Sum_probs=30.9
Q ss_pred CCCcccCCceEEccccCCC---------eeEEee--CcccCCceEEEEEeeEEEE
Q 042451 452 NRPFTKSGGLVFGRDEYGE---------GVTWRL--SREMEGSVLKWRIGGQIWL 495 (529)
Q Consensus 452 ~rPFTk~GGVvFaGdEyge---------~v~WR~--~k~~eGktm~W~I~G~iw~ 495 (529)
.=|.+..||+||+|+.-|. ++.|++ +...-+.-|-+++.|+.++
T Consensus 468 ~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkqYi 522 (571)
T d2ad6a1 468 GGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp SBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEEEE
Confidence 3467889999999975331 344665 5556666788888888776
No 5
>d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=14.72 E-value=26 Score=31.38 Aligned_cols=14 Identities=43% Similarity=0.807 Sum_probs=11.9
Q ss_pred CCceEEccccCCCe
Q 042451 458 SGGLVFGRDEYGEG 471 (529)
Q Consensus 458 ~GGVvFaGdEyge~ 471 (529)
.+.||+||++||.+
T Consensus 100 ~~~vivaG~nyG~G 113 (226)
T d1acoa1 100 IRWVVIGDENYGEG 113 (226)
T ss_dssp CCEEEECCTTBTBS
T ss_pred CCeEeeccCccCCC
Confidence 45699999999985
No 6
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=10.59 E-value=92 Score=30.01 Aligned_cols=45 Identities=18% Similarity=0.394 Sum_probs=31.2
Q ss_pred CCCcccCCceEEccccCCC---------eeEEeeC--cccCCceEEEEEeeEEEEE
Q 042451 452 NRPFTKSGGLVFGRDEYGE---------GVTWRLS--REMEGSVLKWRIGGQIWLS 496 (529)
Q Consensus 452 ~rPFTk~GGVvFaGdEyge---------~v~WR~~--k~~eGktm~W~I~G~iw~T 496 (529)
.-+.+..|||||+|+.=|. ++.|++. ...-|.-|-+.+.|+-++.
T Consensus 481 gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQYv~ 536 (573)
T d1kb0a2 481 GGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (573)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence 4467889999999965322 3456654 4456677888999986653
No 7
>d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.25 E-value=44 Score=30.69 Aligned_cols=12 Identities=42% Similarity=0.789 Sum_probs=10.8
Q ss_pred ceEEccccCCCe
Q 042451 460 GLVFGRDEYGEG 471 (529)
Q Consensus 460 GVvFaGdEyge~ 471 (529)
.||+||.+||++
T Consensus 136 ~iivag~nYG~G 147 (259)
T d2b3ya1 136 LIVLAGKEYGAG 147 (259)
T ss_dssp EEEECCSSBTBS
T ss_pred eEEEeccccccc
Confidence 589999999986
No 8
>d2p3ha1 d.145.1.4 (A:5-102) Uncharacterized protein Cgl1194/Cg1349 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=9.51 E-value=1.3e+02 Score=23.09 Aligned_cols=22 Identities=27% Similarity=0.480 Sum_probs=17.2
Q ss_pred eeEEEEEeeeccccCCcccccccCCCcceeEEEe
Q 042451 311 DNLRFHVAKLGFKRNDDMEFNEERHFPSRVRVWV 344 (529)
Q Consensus 311 dnvR~~V~~l~~~~~~~g~~~eE~HFPSRI~L~v 344 (529)
..+|++|.+. +||=|++|+|++
T Consensus 76 R~~rv~V~~~------------~~~~~~~v~~~~ 97 (98)
T d2p3ha1 76 RILRITVLEV------------ERNVPVKLALAL 97 (98)
T ss_dssp CEEEEEEEEE------------ETTEEEEEEEEE
T ss_pred eEEEEEEEEe------------cCccccEEEEEE
Confidence 3567777666 799999999986
No 9
>d1cf1a2 b.1.18.11 (A:183-393) Arrestin {Cow (Bos taurus), visual arrestin [TaxId: 9913]}
Probab=8.92 E-value=1.6e+02 Score=25.58 Aligned_cols=46 Identities=17% Similarity=0.342 Sum_probs=39.1
Q ss_pred hhhhccccceeeEEEEEEEEEEEecCeEEEEEeeee--------EEEEEeeecc
Q 042451 277 VLRYALAHQQLEAVIQLEYSVVFHDGYIQVNARVDN--------LRFHVAKLGF 322 (529)
Q Consensus 277 ~l~y~L~~QqlE~vIQl~y~V~~~~~~i~V~V~Vdn--------vR~~V~~l~~ 322 (529)
...|-+....+...+++.....+...-|.|+|.||| |++.+.+.+.
T Consensus 11 ~k~f~~~sg~l~l~~~ldr~~Y~~Ge~I~v~v~i~N~s~~~v~~i~~~l~Q~~~ 64 (211)
T d1cf1a2 11 SWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTN 64 (211)
T ss_dssp EEEEEETTEEEEEEEEESCSEEETTCCEEEEEEEEECSSSCEEEEEEEEEEEEE
T ss_pred EeeEEecCCCEEEEEEECCceEcCCCEEEEEEEEEcCCCcceeeEEEEEEEEEE
Confidence 345778888999999999999999999999999999 7887777553
No 10
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]}
Probab=5.37 E-value=1e+02 Score=26.21 Aligned_cols=18 Identities=28% Similarity=0.608 Sum_probs=12.7
Q ss_pred cccCCc-eEEccccCCCee
Q 042451 455 FTKSGG-LVFGRDEYGEGV 472 (529)
Q Consensus 455 FTk~GG-VvFaGdEyge~v 472 (529)
||..|- +|+.|||+|..=
T Consensus 332 lt~pG~P~IYyGdEiG~~~ 350 (396)
T d1m7xa3 332 WAFPGKKLLFMGNEFAQGR 350 (396)
T ss_dssp HHSSSEEEEETTTTTTCSS
T ss_pred HHhCCccEeecccccCCCC
Confidence 444433 789999999753
Done!