Query 042453
Match_columns 666
No_of_seqs 236 out of 1091
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 10:41:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042453.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042453hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zhx_A KES1 protein; oxysterol 100.0 1.3E-85 4.5E-90 721.0 30.3 320 284-627 9-371 (438)
2 2rsg_A Collagen type IV alpha- 99.3 6.9E-12 2.4E-16 108.0 7.8 77 3-81 14-93 (94)
3 3rcp_A Pleckstrin homology dom 99.3 9.4E-12 3.2E-16 108.7 8.1 81 3-85 12-96 (103)
4 2d9x_A Oxysterol binding prote 99.2 1.7E-11 5.9E-16 110.5 6.9 84 3-86 21-108 (120)
5 2dhk_A TBC1 domain family memb 99.0 4.5E-10 1.5E-14 101.3 8.5 84 3-86 23-108 (119)
6 2da0_A 130-kDa phosphatidylino 99.0 7.8E-10 2.7E-14 98.8 9.2 81 4-86 25-105 (114)
7 1v5u_A SBF1, SET binding facto 98.9 2.5E-09 8.5E-14 94.9 8.9 82 4-85 22-114 (117)
8 2cod_A Centaurin-delta 1; ARF 98.9 5E-09 1.7E-13 93.2 10.2 80 3-85 22-102 (115)
9 1x05_A Pleckstrin; PH domain, 98.9 4.2E-09 1.4E-13 95.5 9.5 83 4-86 32-124 (129)
10 2i5f_A Pleckstrin; PH domain, 98.9 4.1E-09 1.4E-13 92.3 9.0 78 4-81 21-108 (109)
11 1x1g_A Pleckstrin 2; PH domain 98.9 1.7E-09 5.7E-14 98.0 6.2 81 3-83 31-125 (129)
12 4a6h_A Phosphatidylinositol 4, 98.9 5.4E-09 1.9E-13 95.5 9.5 77 3-81 19-117 (120)
13 1btk_A Bruton'S tyrosine kinas 98.9 3.7E-09 1.3E-13 102.0 8.8 81 4-86 22-136 (169)
14 1u5d_A SKAP55, SRC kinase-asso 98.8 5.7E-09 1.9E-13 90.8 8.0 78 4-83 21-106 (108)
15 1v88_A Oxysterol binding prote 98.8 6.4E-09 2.2E-13 96.2 8.6 81 3-85 20-127 (130)
16 1fao_A Dual adaptor of phospho 98.8 8.9E-09 3.1E-13 92.9 9.3 81 4-86 32-116 (126)
17 2lul_A Tyrosine-protein kinase 98.8 8.8E-09 3E-13 98.6 9.2 80 5-86 35-125 (164)
18 1eaz_A Tandem PH domain contai 98.8 1E-08 3.5E-13 91.9 9.0 81 4-86 28-115 (125)
19 1v89_A Hypothetical protein KI 98.8 1.4E-08 4.7E-13 89.9 9.3 80 4-85 22-115 (118)
20 1wgq_A FYVE, rhogef and PH dom 98.8 2.1E-08 7.3E-13 88.2 10.4 79 3-83 21-104 (109)
21 1pls_A Pleckstrin homology dom 98.8 1.6E-08 5.5E-13 89.5 9.5 82 3-86 18-105 (113)
22 2p0d_A RHO GTPase-activating p 98.8 1.1E-08 3.9E-13 93.9 8.5 81 4-86 32-128 (129)
23 1fgy_A GRP1; PH domain, signal 98.8 2.1E-08 7.1E-13 90.0 10.0 81 4-86 19-124 (127)
24 2dn6_A KIAA0640 protein; PH do 98.8 1.7E-08 5.8E-13 89.2 9.2 80 4-85 22-106 (115)
25 2d9y_A Pleckstrin homology dom 98.8 1.3E-08 4.4E-13 90.2 8.2 81 3-85 25-112 (117)
26 2d9v_A Pleckstrin homology dom 98.8 2.5E-08 8.4E-13 91.4 9.9 80 3-83 21-115 (130)
27 1u5f_A SRC-associated adaptor 98.7 2.4E-08 8.2E-13 93.1 9.1 80 4-85 35-122 (148)
28 2rlo_A Centaurin-gamma 1; spli 98.7 2.8E-08 9.6E-13 90.6 8.9 80 3-83 19-125 (128)
29 1upq_A PEPP1; PH domain, phosp 98.7 3.8E-08 1.3E-12 88.1 9.3 78 4-83 26-110 (123)
30 2cof_A Protein KIAA1914; PH do 98.7 2.5E-08 8.6E-13 87.8 7.8 78 4-83 20-102 (107)
31 3aj4_A Pleckstrin homology dom 98.7 3.6E-08 1.2E-12 87.1 8.7 79 3-82 18-111 (112)
32 1v5p_A Pleckstrin homology dom 98.7 5.4E-08 1.9E-12 89.4 9.6 83 3-85 29-123 (126)
33 2yry_A Pleckstrin homology dom 98.7 2.8E-08 9.5E-13 88.9 7.4 78 4-83 37-121 (122)
34 2dkp_A Pleckstrin homology dom 98.7 3.7E-08 1.2E-12 88.8 8.2 79 3-83 35-120 (128)
35 1wg7_A Dedicator of cytokinesi 98.7 4E-08 1.4E-12 91.5 8.5 82 4-85 38-127 (150)
36 1btn_A Beta-spectrin; signal t 98.6 5.7E-08 1.9E-12 84.5 7.5 76 3-80 20-106 (106)
37 1x1f_A Signal-transducing adap 98.6 5.7E-08 2E-12 92.0 7.8 79 3-83 31-114 (149)
38 1unq_A RAC-alpha serine/threon 98.6 3.6E-08 1.2E-12 88.9 5.2 83 3-86 21-114 (125)
39 1u5e_A SRC-associated adaptor 98.6 1.3E-07 4.5E-12 94.2 9.1 79 3-83 123-209 (211)
40 3tfm_A Myosin X; split PH doma 98.6 1.2E-07 4.2E-12 95.3 8.8 78 4-83 77-156 (228)
41 2j59_M RHO-GTPase activating p 98.5 1.2E-07 4E-12 90.2 7.9 78 4-83 27-112 (168)
42 2w2x_D 1-phosphatidylinositol- 98.5 2.1E-07 7.1E-12 84.8 8.1 80 4-85 26-122 (124)
43 1qqg_A IRS-1, insulin receptor 98.5 1.6E-07 5.6E-12 96.8 8.0 81 5-85 21-115 (264)
44 2y7b_A Actin-binding protein a 98.5 3E-07 1E-11 83.6 8.7 79 4-84 21-130 (134)
45 3a8p_A T-lymphoma invasion and 98.4 4.1E-07 1.4E-11 93.8 8.8 82 3-86 36-128 (263)
46 3lju_X ARF-GAP with dual PH do 98.4 3.7E-07 1.3E-11 99.0 7.7 78 4-83 284-373 (386)
47 1wjm_A Beta-spectrin III; PH d 98.4 5.5E-07 1.9E-11 81.0 7.7 81 3-85 29-120 (123)
48 1wi1_A Calcium-dependent activ 98.4 9.4E-07 3.2E-11 81.4 8.9 79 4-84 23-112 (126)
49 2q13_A DCC-interacting protein 98.4 5.1E-07 1.8E-11 97.3 7.8 78 5-84 296-377 (385)
50 2coc_A FYVE, rhogef and PH dom 98.3 1.3E-06 4.3E-11 78.9 8.5 80 4-83 21-107 (112)
51 3cxb_B Pleckstrin homology dom 98.3 1.6E-06 5.4E-11 77.5 8.6 80 3-84 17-103 (112)
52 2ys3_A UNC-112-related protein 98.3 9.4E-07 3.2E-11 82.2 6.7 77 3-81 25-111 (137)
53 2r09_A Cytohesin-3; autoinhibi 98.2 1.9E-06 6.3E-11 92.1 9.0 81 3-85 226-331 (347)
54 4h8s_A DCC-interacting protein 98.2 1E-06 3.4E-11 95.7 6.5 79 4-84 318-400 (407)
55 1dro_A Beta-spectrin; cytoskel 98.2 1.6E-06 5.5E-11 78.1 5.7 79 3-83 29-120 (122)
56 3pp2_A RHO GTPase-activating p 98.1 1E-05 3.5E-10 73.5 8.7 76 5-82 30-123 (124)
57 4bbk_A Kindlin-1, fermitin fam 98.1 7E-06 2.4E-10 77.7 7.6 77 3-81 42-128 (165)
58 4f7h_A Fermitin family homolog 98.0 8.3E-06 2.8E-10 77.9 8.0 76 3-80 63-148 (173)
59 3lju_X ARF-GAP with dual PH do 98.0 7E-06 2.4E-10 89.0 8.1 80 4-83 160-247 (386)
60 2rov_A RHO-associated protein 98.0 5.7E-06 1.9E-10 75.1 6.1 76 5-82 19-115 (117)
61 2dtc_A RAL guanine nucleotide 97.9 5.4E-05 1.8E-09 69.7 9.8 80 4-86 22-116 (126)
62 1dyn_A Dynamin; signal transdu 97.7 9E-05 3.1E-09 67.9 8.4 74 5-80 29-115 (125)
63 1w1g_A HPDK1, 3-phosphoinositi 97.7 6.1E-05 2.1E-09 71.2 7.3 76 6-84 66-141 (151)
64 3tca_A Amyloid beta A4 precurs 97.5 9.2E-05 3.2E-09 75.8 6.6 76 4-81 182-275 (291)
65 3a8n_A TIAM-1, T-lymphoma inva 96.9 0.00056 1.9E-08 71.0 4.8 80 4-85 37-127 (279)
66 2lg1_A A-kinase anchor protein 96.9 0.0013 4.3E-08 64.2 7.0 69 18-86 96-176 (185)
67 1mai_A Phospholipase C delta-1 96.9 0.0029 1E-07 58.0 8.6 78 7-85 29-124 (131)
68 4ejn_A RAC-alpha serine/threon 96.8 0.0017 5.8E-08 70.3 7.4 81 3-84 19-110 (446)
69 2d9w_A Docking protein 2; PH d 96.6 0.0064 2.2E-07 55.7 8.7 79 5-86 29-123 (127)
70 2fjl_A 1-phosphatidylinositol- 96.2 0.011 3.9E-07 55.8 8.2 52 31-82 90-148 (150)
71 3qwm_A Iqsec1, IQ motif and SE 96.1 0.022 7.5E-07 53.2 9.2 79 5-85 32-125 (140)
72 1nty_A Triple functional domai 95.9 0.021 7.1E-07 59.3 9.2 75 7-83 222-309 (311)
73 3t06_A PDZ-rhogef, RHO guanine 95.9 0.023 7.9E-07 61.3 9.8 75 9-85 313-411 (418)
74 1xcg_A PDZ-rhogef, RHO guanine 95.9 0.024 8.2E-07 60.0 9.7 66 18-83 278-367 (368)
75 1v61_A RAC/CDC42 guanine nucle 95.8 0.013 4.5E-07 54.2 6.3 77 7-85 45-129 (132)
76 1txd_A RHO guanine nucleotide 95.7 0.015 5.3E-07 62.0 7.5 71 17-87 281-374 (385)
77 3p6a_A RHO guanine nucleotide 95.6 0.045 1.6E-06 58.0 10.4 77 7-85 275-374 (377)
78 1zc3_B Exocyst complex protein 95.3 0.084 2.9E-06 47.2 9.5 67 17-83 34-108 (113)
79 2rgn_B RHOA/RAC/CDC42 exchange 95.3 0.042 1.4E-06 58.2 8.8 68 17-84 237-320 (354)
80 3mpx_A FYVE, rhogef and PH dom 95.2 0.035 1.2E-06 60.1 8.2 76 7-84 259-339 (434)
81 3odw_A RHO guanine nucleotide 95.1 0.059 2E-06 60.5 10.0 77 7-85 428-527 (536)
82 1dbh_A Protein (human SOS 1); 94.9 0.063 2.2E-06 56.5 8.9 76 7-84 260-351 (354)
83 2vrw_B P95VAV, VAV1, proto-onc 94.7 0.071 2.4E-06 57.3 8.8 77 7-85 251-338 (406)
84 3hk0_A Growth factor receptor- 94.5 0.065 2.2E-06 54.9 7.3 76 5-83 147-241 (256)
85 1kz7_A Guanine nucleotide exch 94.2 0.12 4.3E-06 54.5 9.2 76 8-85 239-328 (353)
86 3tfm_A Myosin X; split PH doma 94.1 0.038 1.3E-06 55.1 4.6 52 30-81 174-228 (228)
87 2pz1_A RHO guanine nucleotide 94.0 0.11 3.6E-06 57.0 8.2 77 7-85 351-443 (466)
88 2dfk_A Collybistin II; DH doma 93.5 0.14 5E-06 55.0 8.1 78 7-86 274-367 (402)
89 3ky9_A Proto-oncogene VAV; cal 92.6 0.2 6.7E-06 56.8 7.9 77 7-85 423-510 (587)
90 4gmv_A RAS-associated and plec 92.5 0.18 6E-06 52.3 6.7 77 5-83 173-267 (281)
91 3jzy_A Intersectin 2; C2 domai 92.2 0.027 9.1E-07 62.1 0.0 55 31-85 308-365 (510)
92 2z0q_A XPLN, RHO guanine nucle 92.0 0.23 7.9E-06 52.0 6.9 66 17-82 252-346 (346)
93 1foe_A T-lymphoma invasion and 89.0 0.46 1.6E-05 50.3 6.0 56 31-86 303-370 (377)
94 3ksy_A SOS-1, SON of sevenless 82.7 1.3 4.6E-05 53.5 6.4 66 17-82 465-546 (1049)
95 1fho_A UNC-89; pleckstrin homo 80.9 0.52 1.8E-05 42.6 1.5 69 17-85 34-115 (119)
96 2rr3_B OSBP, oxysterol-binding 77.3 1.1 3.8E-05 33.3 1.9 18 209-226 14-31 (47)
97 2zkm_X 1-phosphatidylinositol- 74.9 4.3 0.00015 47.8 7.2 37 47-83 95-136 (799)
98 3qr0_A Phospholipase C-beta (P 71.1 7.6 0.00026 45.8 8.1 35 47-81 102-141 (816)
99 1v5m_A SH2 and PH domain-conta 66.0 9.4 0.00032 35.2 5.8 78 5-82 41-130 (136)
100 3ohm_B 1-phosphatidylinositol- 61.8 16 0.00055 43.5 8.3 38 45-82 97-139 (885)
101 1z87_A Alpha-1-syntrophin; pro 42.6 32 0.0011 35.0 5.9 50 32-81 206-261 (263)
102 3a98_B Engulfment and cell mot 25.8 3.1E+02 0.011 26.5 9.6 35 48-82 115-150 (203)
103 3hie_A Protein PSL1, exocyst c 20.6 1.9E+02 0.0065 27.5 6.6 81 4-85 62-151 (171)
No 1
>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A
Probab=100.00 E-value=1.3e-85 Score=721.05 Aligned_cols=320 Identities=22% Similarity=0.358 Sum_probs=282.9
Q ss_pred ccchhHHHhhhccC---CCCccccccccccccCChhhhhhhcccchHhHHHHhhcC-------CCCC------HHHHHHH
Q 042453 284 RGVSLWSMIKDNVG---KDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYG-------KAGN------SLLRILN 347 (666)
Q Consensus 284 ~~vslwsilK~~iG---kDLtkIslPv~~~EP~S~LQr~~e~~ey~~lLd~Aa~~~-------~~~d------p~eRm~~ 347 (666)
.+.++|+++.++|| +|||+|+|||+||||+|+||+++++|+|++||+.|+... +..| |++||++
T Consensus 9 ~~~s~w~~~lK~i~k~g~DLSkIslPv~i~EP~SlLE~~~~~~e~~dLL~~aa~~~~~~~~a~~~~D~~~~~~p~eRm~~ 88 (438)
T 1zhx_A 9 ASSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLA 88 (438)
T ss_dssp TTSHHHHHHHHTTTTCCSCGGGSCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHHH
T ss_pred ccccHHHHHHHHhhhcCCChhhcccCchhcCCccHHHHHHHhhhhHHHHhhhhhcccccccccccCCccccCCHHHHHHH
Confidence 56899986666665 599999999999999999999999999999999998631 1238 9999999
Q ss_pred HHHHHHhhhcccC-------CCCCCCCCCCCCCeEEEEecC-----CC-eEEEeeecccCCceeeEEEeCC--cEEEEEE
Q 042453 348 VAAFAVSGYASSE-------GRHCKPFNPLLGETYEADYPE-----KG-VRFFSEKVSHHPTVIACHCEGK--GWKFWGD 412 (666)
Q Consensus 348 V~aF~vS~y~~~~-------~r~kKPfNPILGETFe~~~~d-----~g-~rfiaEQVSHHPPIsAf~~e~~--g~~~~G~ 412 (666)
|++|+||+|++.. ++.+|||||||||||+|.|++ .| ++|||||||||||||||||+++ ||+++|+
T Consensus 89 V~af~lS~~~~~y~~~~~~~~~~kKPfNPiLGETFe~~~~d~~~~~~g~~~~iaEQVSHHPPISA~~~e~~~~g~~~~g~ 168 (438)
T 1zhx_A 89 VTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGY 168 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEEE
T ss_pred HHHHHHhhhhhhcccccccccccccCcCCcccceEEEEecCccCCCCCcEEEEEEeccCCCCeeEEEEEcCCCCEEEEEE
Confidence 9999999987532 688999999999999999986 45 8999999999999999999974 8999999
Q ss_pred eeeeEEEEEe-EEEEEEeeEEEEEecCCcEEEEeeeeeeeeeeeeceeeEeecceEEEEcCCcceEEEeeeecccccCCC
Q 042453 413 SNLRTKFWGR-SIQLDPVGVLTVEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNP 491 (666)
Q Consensus 413 ~~~kskF~G~-Si~v~~~G~~~l~f~~gE~Y~~~~p~~~i~nli~G~~~ie~~G~~~I~~~tg~~a~i~Fk~k~~~g~~~ 491 (666)
+.+++||||+ ||+|.+.|.++|+|. ||+|+|++|+++|+|||+|++|+|++|+|.|+|.+|++|+|+|+++|||||+.
T Consensus 169 ~~~kskF~G~~Sv~v~~~G~~~l~l~-~E~Y~~t~P~~~v~gIi~G~~~vE~~G~~~I~~~tg~~~~l~F~~kg~f~g~~ 247 (438)
T 1zhx_A 169 NQIKASFTKSLMLTVKQFGHTMLDIK-DESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKK 247 (438)
T ss_dssp EEEEEEECTTCCEEEEEECCEEEEET-TEEEEEECCCEEEECTTTTCCEEEECSEEEEEETTSCEEEEEEECSSSSCSSS
T ss_pred eeeEEEEcCceEEEEEcceEEEEEEC-CcEEEEecCcEEEEEEEecceeEecCCeEEEEcCCCCEEEEEEcCCCCcCCCc
Confidence 9999999999 999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcc------CCcEEEEEEeEECceEEEEeCCCCCcccCCCCCCCCeeEeecCCCCccccccccccceeecccC
Q 042453 492 HQVNGFVEDV------LGKKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNEL 565 (666)
Q Consensus 492 ~~V~G~I~d~------~gk~~~~i~G~Wd~~i~~~~~~~~~k~k~~~~~~~~~~lW~~~~~~~~~~~y~~t~fa~~LNel 565 (666)
|.|+|.|++. +|+++++|.|+|++.|++...... ....++|+.++.+... + .+
T Consensus 248 n~v~G~I~~~~~~~~~~~~~l~~i~G~W~~~l~i~~~~~~---------~~~~~~~~~~~~~~~~-------~-----~v 306 (438)
T 1zhx_A 248 NSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK---------EESRLFYDAARIPAEH-------L-----NV 306 (438)
T ss_dssp SEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG---------GGCEEEEETTTSCCCC-------C-----BC
T ss_pred cEEEEEEEcCCcccCCCCcEEEEEEEEEcceEEEEeCCCC---------ccceEEeccCCCCCcc-------c-----cC
Confidence 9999999984 678899999999999999765430 1257899998754321 1 12
Q ss_pred CccccCCCCCCCCCC--hhhhhhhhcCChhHHHHHHHHHHHHHHHHHHhhc---CCCCcceeEecCC
Q 042453 566 TPGLQEKLPPTDSRL--RPDQRHLENGEYEKANAEKQRLERRQRMSRKLQE---NGWKPRWFRREGE 627 (666)
Q Consensus 566 ~p~l~~~l~PTDSR~--RpD~raLe~Gd~d~A~~eK~rLEekQR~~RK~re---~~w~Pr~F~~~~~ 627 (666)
.| .+.++|||||+ |||++||++||++.|+++|.+|||+||++||+|+ ..|+||||++..+
T Consensus 307 ~p--~e~q~ptdSR~~Wr~d~~ale~Gd~d~A~~eK~rLEe~QR~~rk~re~~g~~w~Pr~F~~~~~ 371 (438)
T 1zhx_A 307 KP--LEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDY 371 (438)
T ss_dssp CC--GGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSEEEEEC
T ss_pred CC--hhhCCCcccchhhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccceEEECCc
Confidence 33 24578999997 8999999999999999999999999999998775 5799999999754
No 2
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.27 E-value=6.9e-12 Score=108.03 Aligned_cols=77 Identities=18% Similarity=0.155 Sum_probs=70.6
Q ss_pred cccceeeeeeeecCCCceeEEeccCC---ccceeEEeeeeEEeecCCCCccEEEEeCCcEEEEEcCChhhHHHHHHHHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGS---LAFGDLEGIISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVS 79 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~---~~~G~i~L~~a~i~~~~~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~~ 79 (666)
+-+||-|-|||. .+.|.||.++.. .+.|.|.|..+.+..++.++..|.|.+++++++|+|+|.+|+.+||+||++
T Consensus 14 ~k~WkkR~FvL~--~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~ 91 (94)
T 2rsg_A 14 IHGWQDRWVVLK--NNALSYYKSEDETEYGCRGSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQ 91 (94)
T ss_dssp TTCEEEEEEEEE--TTEEEEESSTTGGGTCCSEEEETTTCEEEECSSCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHH
T ss_pred CCCceEEEEEEE--CCEEEEEEecccccccceeeEecceeeeecCcccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHh
Confidence 457999999985 679999987764 578999999999999999999999999999999999999999999999999
Q ss_pred Hh
Q 042453 80 TR 81 (666)
Q Consensus 80 ~~ 81 (666)
|+
T Consensus 92 Ak 93 (94)
T 2rsg_A 92 HK 93 (94)
T ss_dssp HC
T ss_pred hc
Confidence 86
No 3
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.26 E-value=9.4e-12 Score=108.70 Aligned_cols=81 Identities=14% Similarity=0.210 Sum_probs=73.1
Q ss_pred cccceeeeeeeecCCCceeEEeccCC---ccceeEEeeeeEEeecCCCCccEEEEeC-CcEEEEEcCChhhHHHHHHHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGS---LAFGDLEGIISSFRESKSDDRRFYIFTA-TKTLHLRTNSRRDRVAWIQALV 78 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~---~~~G~i~L~~a~i~~~~~d~~~f~i~~~-~~~~~lra~~~~~r~~Wi~al~ 78 (666)
+-+||-|-|||. .+.|.||++++. .++|+|.|.++.|..+++++..|.|.+. +++++|+|+|.+|+++||+||+
T Consensus 12 ~k~Wk~R~fvL~--~~~L~Yy~~~~~~~~~~~g~i~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~ 89 (103)
T 3rcp_A 12 LTGWQPRWFVLD--NGILSYYDSQDDVCKGSKGSIKMAVCEIKVHSADNTRMELIIPGEQHFYMKAVNAAERQRWLVALG 89 (103)
T ss_dssp TTCEEEEEEEEE--TTEEEEESSCC---CCCSCEEEGGGCEEECCTTCSSEEEEEETTTEEEEEECSSHHHHHHHHHHHH
T ss_pred CCCeeceEEEEE--CCEEEEEecCCcccCCcccEEEeeeeEEEEcCCCCceEEEEeCCCCEEEEECCCHHHHHHHHHHHH
Confidence 357999999997 689999999874 5899999999999999999999999996 8999999999999999999999
Q ss_pred HHhHhCC
Q 042453 79 STRSLYP 85 (666)
Q Consensus 79 ~~~~~~~ 85 (666)
.|+...+
T Consensus 90 ~a~~~~~ 96 (103)
T 3rcp_A 90 SSKASLT 96 (103)
T ss_dssp TTSCCCC
T ss_pred HHHHhcc
Confidence 9987765
No 4
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=1.7e-11 Score=110.52 Aligned_cols=84 Identities=17% Similarity=0.190 Sum_probs=76.0
Q ss_pred cccceeeeeeeecCCCceeEEeccCC---ccceeEEeeeeEEeecCCCCccEEEEeCC-cEEEEEcCChhhHHHHHHHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGS---LAFGDLEGIISSFRESKSDDRRFYIFTAT-KTLHLRTNSRRDRVAWIQALV 78 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~---~~~G~i~L~~a~i~~~~~d~~~f~i~~~~-~~~~lra~~~~~r~~Wi~al~ 78 (666)
+..||-|-|||.-..+.|.||+++.. .++|+|.|..+.|..++.++..|.|.+.+ ++++|+|+|.+|+.+||+||+
T Consensus 21 ~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~ 100 (120)
T 2d9x_A 21 VTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPSDEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQ 100 (120)
T ss_dssp TTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCCEECCSSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHH
T ss_pred CCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcceEEEEecCCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHH
Confidence 35799999999876789999998775 78999999999999988999999999986 999999999999999999999
Q ss_pred HHhHhCCc
Q 042453 79 STRSLYPL 86 (666)
Q Consensus 79 ~~~~~~~~ 86 (666)
.++..+..
T Consensus 101 ~~~~~~~~ 108 (120)
T 2d9x_A 101 ICTQHHTE 108 (120)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 99888764
No 5
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=4.5e-10 Score=101.26 Aligned_cols=84 Identities=17% Similarity=0.208 Sum_probs=73.6
Q ss_pred cccceeeeeeeecCCCceeEEeccCC-ccceeEEeeeeEEeec-CCCCccEEEEeCCcEEEEEcCChhhHHHHHHHHHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEGIISSFRES-KSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVST 80 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L~~a~i~~~-~~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~~~ 80 (666)
+-.||-|-|||......|.||++++. .++|.|.|..+.+... +..+..|.|.+.+++++|+|+|.+|+.+||+||+.+
T Consensus 23 ~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~ 102 (119)
T 2dhk_A 23 IRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCKADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMK 102 (119)
T ss_dssp SCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEECTTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCceeEEEEEECCccEEEEECCCCCcccccEEECCCCEEEecCCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHH
Confidence 45799999999876668999998876 8999999999988754 345678999999999999999999999999999999
Q ss_pred hHhCCc
Q 042453 81 RSLYPL 86 (666)
Q Consensus 81 ~~~~~~ 86 (666)
+..+..
T Consensus 103 ~~~~~~ 108 (119)
T 2dhk_A 103 RWEFHN 108 (119)
T ss_dssp HHHHHH
T ss_pred HHHhcC
Confidence 988764
No 6
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=7.8e-10 Score=98.83 Aligned_cols=81 Identities=15% Similarity=0.184 Sum_probs=74.2
Q ss_pred ccceeeeeeeecCCCceeEEeccCCccceeEEeeeeEEeecCCCCccEEEEeCCcEEEEEcCChhhHHHHHHHHHHHhHh
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVGSLAFGDLEGIISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSL 83 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~~~~~G~i~L~~a~i~~~~~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~~~~~~ 83 (666)
-.||-|-||| ..+.|.||++++..+.|.|.|..+.|..+++....|.|.++.++++|+|+|.+|+.+||+||+.++..
T Consensus 25 k~WkkR~fvL--~~~~L~yyk~~~~~~~~~i~l~~~~v~~~~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 102 (114)
T 2da0_A 25 KVWQRRKCSV--KNGILTISHATSNRQPAKLNLLTCQVKPNAEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEE 102 (114)
T ss_dssp CCEEEEEEEE--ETTEEEECCSSCCSCCEEEETTTSEEEECSSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCceeEEEEE--eCCEEEEEcCCCCCCCCEEEeeeeEEEECCCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 5799999999 56799999999999999999999888888888889999999999999999999999999999999988
Q ss_pred CCc
Q 042453 84 YPL 86 (666)
Q Consensus 84 ~~~ 86 (666)
..+
T Consensus 103 ~~~ 105 (114)
T 2da0_A 103 ALT 105 (114)
T ss_dssp HHT
T ss_pred HHH
Confidence 654
No 7
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.93 E-value=2.5e-09 Score=94.90 Aligned_cols=82 Identities=13% Similarity=0.072 Sum_probs=70.0
Q ss_pred ccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecC----------CCCccEEEEeCCcEEEEEcCChhhHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESK----------SDDRRFYIFTATKTLHLRTNSRRDRVA 72 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~----------~d~~~f~i~~~~~~~~lra~~~~~r~~ 72 (666)
..||-|-|||.-+.+.|.||++++ ..++|+|.|..+.+.... .....|.|.++.++++|+|+|.+|+.+
T Consensus 22 ~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~ 101 (117)
T 1v5u_A 22 KPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQ 101 (117)
T ss_dssp SCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESSCEEEEECSSHHHHHH
T ss_pred CCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEEEECCCceEEEECCCHHHHHH
Confidence 579999999987678999999876 589999999998866532 233689999999999999999999999
Q ss_pred HHHHHHHHhHhCC
Q 042453 73 WIQALVSTRSLYP 85 (666)
Q Consensus 73 Wi~al~~~~~~~~ 85 (666)
||+||+.++..-|
T Consensus 102 Wi~al~~~i~~~~ 114 (117)
T 1v5u_A 102 WVDRIQSCLSSGP 114 (117)
T ss_dssp HHHHHHTTCCCCC
T ss_pred HHHHHHHHhccCC
Confidence 9999999976644
No 8
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.91 E-value=5e-09 Score=93.22 Aligned_cols=80 Identities=15% Similarity=0.113 Sum_probs=68.4
Q ss_pred cccceeeeeeeecCCCceeEEeccCC-ccceeEEeeeeEEeecCCCCccEEEEeCCcEEEEEcCChhhHHHHHHHHHHHh
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEGIISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTR 81 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L~~a~i~~~~~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~~~~ 81 (666)
.-.||-|-|||. .+.|.||+++.. .++|.|.|..+..... .++..|.|.++.++++|+|+|.+|+.+||+||+.++
T Consensus 22 ~~~WkkR~fvL~--~~~L~yy~~~~~~~~~g~i~l~~~~~v~~-~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 22 KRMFQKRWVKFD--GLSISYYNNEKEMYSKGIIPLSAISTVRV-QGDNKFEVVTTQRTFVFRVEKEEERNDWISILLNAL 98 (115)
T ss_dssp SSCCEEEEEEEC--SSEEEEEESSCCSSCCCEEETTTEEEEEE-ETTTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEE--CCEEEEEcCCCCcccCCEEECCcceEEEe-CCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 357999999987 568999998876 8999999998753332 347899999999999999999999999999999998
Q ss_pred HhCC
Q 042453 82 SLYP 85 (666)
Q Consensus 82 ~~~~ 85 (666)
...+
T Consensus 99 ~~~~ 102 (115)
T 2cod_A 99 KSQS 102 (115)
T ss_dssp HHHS
T ss_pred HhCc
Confidence 7665
No 9
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=98.90 E-value=4.2e-09 Score=95.48 Aligned_cols=83 Identities=19% Similarity=0.251 Sum_probs=70.2
Q ss_pred ccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecCC--------CCccEEEEeCC-cEEEEEcCChhhHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESKS--------DDRRFYIFTAT-KTLHLRTNSRRDRVAW 73 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~~--------d~~~f~i~~~~-~~~~lra~~~~~r~~W 73 (666)
-.||-|-|||......|.||+++. ..+.|+|.|..+.|..... .+..|.|.+.. .+++|+|+|.+|+.+|
T Consensus 32 ~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~W 111 (129)
T 1x05_A 32 KNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEW 111 (129)
T ss_dssp CCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHH
T ss_pred CCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHH
Confidence 469999999987777899998764 6899999999988765433 46789999975 5699999999999999
Q ss_pred HHHHHHHhHhCCc
Q 042453 74 IQALVSTRSLYPL 86 (666)
Q Consensus 74 i~al~~~~~~~~~ 86 (666)
|+||+.++.....
T Consensus 112 i~al~~~~~~~~~ 124 (129)
T 1x05_A 112 IKAIQMASRTGKS 124 (129)
T ss_dssp HHHHHHHHTCCSC
T ss_pred HHHHHHHHHccCC
Confidence 9999999877653
No 10
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=98.89 E-value=4.1e-09 Score=92.33 Aligned_cols=78 Identities=21% Similarity=0.302 Sum_probs=66.4
Q ss_pred ccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecCC--------CCccEEEEeCC-cEEEEEcCChhhHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESKS--------DDRRFYIFTAT-KTLHLRTNSRRDRVAW 73 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~~--------d~~~f~i~~~~-~~~~lra~~~~~r~~W 73 (666)
-.||-|-|||..+...|.||+++. ..+.|+|.|..+.|..... .+..|.|.+.. .+++|+|+|.+|+.+|
T Consensus 21 ~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~W 100 (109)
T 2i5f_A 21 KNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEW 100 (109)
T ss_dssp CCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHH
T ss_pred CCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHH
Confidence 469999999987777999998764 5899999999988765433 46789999986 5699999999999999
Q ss_pred HHHHHHHh
Q 042453 74 IQALVSTR 81 (666)
Q Consensus 74 i~al~~~~ 81 (666)
|.||+.|+
T Consensus 101 i~ai~~~~ 108 (109)
T 2i5f_A 101 IKAIQMAS 108 (109)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999985
No 11
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.88 E-value=1.7e-09 Score=97.96 Aligned_cols=81 Identities=17% Similarity=0.193 Sum_probs=68.8
Q ss_pred cccceeeeeeeecCCCceeEEecc--CCccceeEEeeeeEEeecCC-----------CCccEEEEeCC-cEEEEEcCChh
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSV--GSLAFGDLEGIISSFRESKS-----------DDRRFYIFTAT-KTLHLRTNSRR 68 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~--~~~~~G~i~L~~a~i~~~~~-----------d~~~f~i~~~~-~~~~lra~~~~ 68 (666)
.-.||-|-|||......|.||+++ +..++|+|.|..+.|..... .+..|.|.+.. .+++|+|+|.+
T Consensus 31 ~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~ 110 (129)
T 1x1g_A 31 RKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKA 110 (129)
T ss_dssp SSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTTCCCEEECCSSHH
T ss_pred CCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCCCCEEEEEcCCHH
Confidence 357999999998777899999985 67999999999887765443 36789999987 56999999999
Q ss_pred hHHHHHHHHHHHhHh
Q 042453 69 DRVAWIQALVSTRSL 83 (666)
Q Consensus 69 ~r~~Wi~al~~~~~~ 83 (666)
|+.+||+||+.++..
T Consensus 111 e~~~Wi~al~~~~~~ 125 (129)
T 1x1g_A 111 ERAEWIEAIKKLTSG 125 (129)
T ss_dssp HHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999754
No 12
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=98.88 E-value=5.4e-09 Score=95.50 Aligned_cols=77 Identities=10% Similarity=0.135 Sum_probs=65.0
Q ss_pred cccceeeeeeeecCCCceeEEecc----CCccceeEEeeeeEEeecCC-----------CCccEEEEeCC-------cEE
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSV----GSLAFGDLEGIISSFRESKS-----------DDRRFYIFTAT-------KTL 60 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~----~~~~~G~i~L~~a~i~~~~~-----------d~~~f~i~~~~-------~~~ 60 (666)
+-+|+-|-|||.- +.|+||+++ +..|.|.|.|.++.|..... .+.+|.|.+.+ .++
T Consensus 19 ~k~W~~rwfVL~~--~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y 96 (120)
T 4a6h_A 19 LKSYSKGYYVLTP--NFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNW 96 (120)
T ss_dssp TTEEEEEEEEECS--SEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEE
T ss_pred CCCCccEEEEEeC--CEEEEEcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEE
Confidence 4579999999964 499999876 45699999999999998543 35689999876 389
Q ss_pred EEEcCChhhHHHHHHHHHHHh
Q 042453 61 HLRTNSRRDRVAWIQALVSTR 81 (666)
Q Consensus 61 ~lra~~~~~r~~Wi~al~~~~ 81 (666)
+|+|+|.+|+++||+||+.+.
T Consensus 97 ~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 97 VFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp EEECSSHHHHHHHHHHHHHHC
T ss_pred EEEcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999884
No 13
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=98.87 E-value=3.7e-09 Score=101.96 Aligned_cols=81 Identities=12% Similarity=0.075 Sum_probs=67.4
Q ss_pred ccceeeeeeeecCCCceeEEec-----cCCccceeEEeeeeEEeecC----CCC-------------------------c
Q 042453 4 EDEKLRIFFELLTLPGSHFLSS-----VGSLAFGDLEGIISSFRESK----SDD-------------------------R 49 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~-----~~~~~~G~i~L~~a~i~~~~----~d~-------------------------~ 49 (666)
.+||-|-|||. .+.|.||++ .+..++|.|.|..+.+.+.. ++. .
T Consensus 22 k~WKkRwFVL~--~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 99 (169)
T 1btk_A 22 LNFKKCLFLLT--VHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPY 99 (169)
T ss_dssp CCEEEEEEEEC--SSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCE
T ss_pred CCCceEEEEEc--CCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccc
Confidence 57999999996 469999997 45799999999987644322 221 4
Q ss_pred cEEEEeCCcEEEEEcCChhhHHHHHHHHHHHhHhCCc
Q 042453 50 RFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSLYPL 86 (666)
Q Consensus 50 ~f~i~~~~~~~~lra~~~~~r~~Wi~al~~~~~~~~~ 86 (666)
.|.|.+..++++|+|+|.+||.+||+||+.++...|.
T Consensus 100 ~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~~n~~ 136 (169)
T 1btk_A 100 PFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRYNSD 136 (169)
T ss_dssp EEEEEETTCCEEEEESCHHHHHHHHHHHHHHHTTCSC
T ss_pred cEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHHCcc
Confidence 6999999999999999999999999999999887664
No 14
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=98.84 E-value=5.7e-09 Score=90.79 Aligned_cols=78 Identities=13% Similarity=0.056 Sum_probs=67.3
Q ss_pred ccceeeeeeeecCCCceeEEeccCC-ccceeEEeeeeEEeecC---CC---CccEEEEeCC-cEEEEEcCChhhHHHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEGIISSFRESK---SD---DRRFYIFTAT-KTLHLRTNSRRDRVAWIQ 75 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L~~a~i~~~~---~d---~~~f~i~~~~-~~~~lra~~~~~r~~Wi~ 75 (666)
..||-|-|||. .+.|.||+++.. .++|+|.|..+.+...+ .+ +..|.|.+.+ ++++|+|+|.+|+.+||+
T Consensus 21 ~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ 98 (108)
T 1u5d_A 21 SEWQKRWCVVS--RGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVD 98 (108)
T ss_dssp EEEEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHH
T ss_pred cCceeeEEEEe--CCEEEEecCCCCCCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHH
Confidence 57999999986 679999998774 78999999999987752 22 4679999987 899999999999999999
Q ss_pred HHHHHhHh
Q 042453 76 ALVSTRSL 83 (666)
Q Consensus 76 al~~~~~~ 83 (666)
||+.|+..
T Consensus 99 ai~~~i~~ 106 (108)
T 1u5d_A 99 QISFLLKD 106 (108)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999765
No 15
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.84 E-value=6.4e-09 Score=96.15 Aligned_cols=81 Identities=16% Similarity=0.070 Sum_probs=67.2
Q ss_pred cccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecCCCC--ccEEEEeCC----------------------
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESKSDD--RRFYIFTAT---------------------- 57 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~~d~--~~f~i~~~~---------------------- 57 (666)
+..||-|-|||. .+.|.||+++. ..+.|+|.|..+.|...+++. ..|.|.+..
T Consensus 20 ~k~WkrRWfVLk--~~~L~yyk~~~~~~p~G~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~ 97 (130)
T 1v88_A 20 LKSWTKLWCVLK--PGVLLIYKTQKNGQWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPL 97 (130)
T ss_dssp SSSCEEEEEEEE--TTEEEEESCSSSCCCCEEEECSSCEECCCCTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCC
T ss_pred CCCceEEEEEEE--CCEEEEECCCCCCCceEEEEcCCCEEEECCCCCCCeEEEEEcCCccccccccCCcccccccccccC
Confidence 457999999997 57999998776 589999999999997665543 589998753
Q ss_pred --cEEEEEcCChhhHHHHHHHHHHHhHhCC
Q 042453 58 --KTLHLRTNSRRDRVAWIQALVSTRSLYP 85 (666)
Q Consensus 58 --~~~~lra~~~~~r~~Wi~al~~~~~~~~ 85 (666)
.+++|+|+|.+|+++||+||+.|+..-|
T Consensus 98 ~~~~~~f~A~s~~e~~~Wi~ai~~a~~~~~ 127 (130)
T 1v88_A 98 PSSYLIIRATSESDGRCWMDALELALKSGP 127 (130)
T ss_dssp CSSCCEEECSSHHHHHHHHHHHHHHHTTTT
T ss_pred CceEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence 2489999999999999999999986543
No 16
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=98.83 E-value=8.9e-09 Score=92.89 Aligned_cols=81 Identities=15% Similarity=0.037 Sum_probs=67.3
Q ss_pred ccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecC---CCCccEEEEeCCcEEEEEcCChhhHHHHHHHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESK---SDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVS 79 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~---~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~~ 79 (666)
..||-|-|||. .+.|.||++++ ..+.|.|.|..+.+.... ..+..|.|.++.++++|+|+|.+|+.+||.||+.
T Consensus 32 ~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~ 109 (126)
T 1fao_A 32 KTWKTRWFTLH--RNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRW 109 (126)
T ss_dssp CCEEEEEEEEE--TTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCcccEEEEEE--CCEEEEeCCCCCCCceeEEEccceEEEEecccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHH
Confidence 46899999996 46899998776 689999999999844332 2345799999999999999999999999999999
Q ss_pred HhHhCCc
Q 042453 80 TRSLYPL 86 (666)
Q Consensus 80 ~~~~~~~ 86 (666)
++.....
T Consensus 110 ~i~~~~~ 116 (126)
T 1fao_A 110 KLSQIRK 116 (126)
T ss_dssp HHHTC--
T ss_pred HHHHHHh
Confidence 9988654
No 17
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=98.82 E-value=8.8e-09 Score=98.62 Aligned_cols=80 Identities=16% Similarity=0.135 Sum_probs=65.6
Q ss_pred cceeeeeeeecCCCceeEEeccC--CccceeEEeeeeEEeec-CC--------CCccEEEEeCCcEEEEEcCChhhHHHH
Q 042453 5 DEKLRIFFELLTLPGSHFLSSVG--SLAFGDLEGIISSFRES-KS--------DDRRFYIFTATKTLHLRTNSRRDRVAW 73 (666)
Q Consensus 5 ~~~~~~~~~~~~~~~l~y~~~~~--~~~~G~i~L~~a~i~~~-~~--------d~~~f~i~~~~~~~~lra~~~~~r~~W 73 (666)
.||-|-|||. .+.|.||++++ ..++|.|.|..+...+. .. ....|.|.+++++++|+|+|.+||++|
T Consensus 35 nWKkRwFVL~--~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~W 112 (164)
T 2lul_A 35 NYKERLFVLT--KSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLW 112 (164)
T ss_dssp CEEEEEEEEE--SSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSSCEEEEECSSHHHHHHH
T ss_pred CceeEEEEEE--CCEEEEEeccCcccccccEEEEeeeEEEEeccccccCcccccceeEEEecCCcEEEEECCCHHHHHHH
Confidence 5999999985 57999999876 36789999987654432 21 234699999999999999999999999
Q ss_pred HHHHHHHhHhCCc
Q 042453 74 IQALVSTRSLYPL 86 (666)
Q Consensus 74 i~al~~~~~~~~~ 86 (666)
|+||+.++...+.
T Consensus 113 i~aL~~~i~~n~~ 125 (164)
T 2lul_A 113 VKKLKEEIKNNNN 125 (164)
T ss_dssp HHHHHHHHTTCSC
T ss_pred HHHHHHHHHHChh
Confidence 9999999876554
No 18
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=98.81 E-value=1e-08 Score=91.94 Aligned_cols=81 Identities=16% Similarity=0.080 Sum_probs=68.0
Q ss_pred ccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeec------CCCCccEEEEeCCcEEEEEcCChhhHHHHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRES------KSDDRRFYIFTATKTLHLRTNSRRDRVAWIQA 76 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~------~~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~a 76 (666)
-.||-|-|||. .+.|.||+++. ..+.|+|.|..+..... ...+..|.|.+.+++++|+|+|.+|+.+||+|
T Consensus 28 ~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~a 105 (125)
T 1eaz_A 28 KNWKRRYFQLD--ENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKA 105 (125)
T ss_dssp CCEEEEEEEEC--SSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEEEECSSHHHHHHHHHH
T ss_pred CCcceEEEEEe--CCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHH
Confidence 46999999985 46899998776 58999999998754433 23478899999999999999999999999999
Q ss_pred HHHHhHhCCc
Q 042453 77 LVSTRSLYPL 86 (666)
Q Consensus 77 l~~~~~~~~~ 86 (666)
|+.++.....
T Consensus 106 l~~~i~~~~~ 115 (125)
T 1eaz_A 106 VSGAIVAQRG 115 (125)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHhccC
Confidence 9999987654
No 19
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.80 E-value=1.4e-08 Score=89.87 Aligned_cols=80 Identities=14% Similarity=0.131 Sum_probs=67.3
Q ss_pred ccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecC---CC--CccEEEEe--------CCcEEEEEcCChhh
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESK---SD--DRRFYIFT--------ATKTLHLRTNSRRD 69 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~---~d--~~~f~i~~--------~~~~~~lra~~~~~ 69 (666)
..||-|-|||.. +.|.||+++. ..+.|+|.|..+.+.... ++ +..|.|.+ +.++++|+|+|.+|
T Consensus 22 ~~Wk~R~fvL~~--~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e 99 (118)
T 1v89_A 22 KNWQQRYFVLRA--QQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAE 99 (118)
T ss_dssp SCEEEEEEEEET--TEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHH
T ss_pred CCccEEEEEEEC--CEEEEEeCCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHH
Confidence 469999999874 5999998776 589999999999887543 22 44899988 78899999999999
Q ss_pred HHHHHHHHHHHhHhCC
Q 042453 70 RVAWIQALVSTRSLYP 85 (666)
Q Consensus 70 r~~Wi~al~~~~~~~~ 85 (666)
+.+||+||+.|+..-|
T Consensus 100 ~~~Wi~al~~~~~~~~ 115 (118)
T 1v89_A 100 MEEWVKFLRRVAGSGP 115 (118)
T ss_dssp HHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHccCC
Confidence 9999999999988654
No 20
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.80 E-value=2.1e-08 Score=88.22 Aligned_cols=79 Identities=10% Similarity=0.023 Sum_probs=67.1
Q ss_pred cccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecCCCC---ccEEEEeCC-cEEEEEcCChhhHHHHHHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESKSDD---RRFYIFTAT-KTLHLRTNSRRDRVAWIQAL 77 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~~d~---~~f~i~~~~-~~~~lra~~~~~r~~Wi~al 77 (666)
+..||-|-|||. .+.|.||+++. ..+.|.|.|..+.+....+++ ..|.|.+.. ++++|+|+|.+|+..||+||
T Consensus 21 ~~~Wk~RwfvL~--~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al 98 (109)
T 1wgq_A 21 KKPWKHLWFVIK--NKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAF 98 (109)
T ss_dssp TSCCEEEEEEEE--TTEEEEESCTTCSSCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHH
T ss_pred CCCceeEEEEEe--CCEEEEECCCCcCccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHH
Confidence 357999999997 48999999876 589999999999988766543 579998775 67999999999999999999
Q ss_pred HHHhHh
Q 042453 78 VSTRSL 83 (666)
Q Consensus 78 ~~~~~~ 83 (666)
+.|...
T Consensus 99 ~~a~~~ 104 (109)
T 1wgq_A 99 QEGTVS 104 (109)
T ss_dssp HHHHSC
T ss_pred HHHhcc
Confidence 999654
No 21
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.79 E-value=1.6e-08 Score=89.48 Aligned_cols=82 Identities=15% Similarity=0.078 Sum_probs=68.4
Q ss_pred cccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEee--cC--CCCccEEEEeCC-cEEEEEcCChhhHHHHHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRE--SK--SDDRRFYIFTAT-KTLHLRTNSRRDRVAWIQA 76 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~--~~--~d~~~f~i~~~~-~~~~lra~~~~~r~~Wi~a 76 (666)
+..||-|-|||.. +.|.||++++ ..+.|+|.|..+.+.. .+ ..+..|.|.+.. ++++|+|+|.+|+.+||+|
T Consensus 18 ~~~Wk~R~fvL~~--~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~a 95 (113)
T 1pls_A 18 FNTWKPMWVVLLE--DGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRD 95 (113)
T ss_dssp SSCCEEEEEEEET--TEEEEESSTTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHH
T ss_pred CCCceEEEEEEEC--CEEEEEeCCCCCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHH
Confidence 3569999999875 5899999886 5899999999999865 22 223489999875 8999999999999999999
Q ss_pred HHHHhHhCCc
Q 042453 77 LVSTRSLYPL 86 (666)
Q Consensus 77 l~~~~~~~~~ 86 (666)
|+.++.....
T Consensus 96 i~~~~~~~~~ 105 (113)
T 1pls_A 96 INKAIKCIEG 105 (113)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHhccch
Confidence 9999887653
No 22
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=98.79 E-value=1.1e-08 Score=93.89 Aligned_cols=81 Identities=12% Similarity=0.039 Sum_probs=66.7
Q ss_pred ccceeeeeeeecCCCceeEEecc------------CCccceeEEeeeeEEeecCCCC---ccEEEEeCC-cEEEEEcCCh
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSV------------GSLAFGDLEGIISSFRESKSDD---RRFYIFTAT-KTLHLRTNSR 67 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~------------~~~~~G~i~L~~a~i~~~~~d~---~~f~i~~~~-~~~~lra~~~ 67 (666)
..||-|-|||. .+.|.||+.+ +..|.|+|.|..|.|....++. ..|.|.+.. .+++|+|+|.
T Consensus 32 k~Wk~rwfvL~--~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kr~~~F~l~t~~~~~yl~qA~s~ 109 (129)
T 2p0d_A 32 KNWGPSWVVLT--GNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHE 109 (129)
T ss_dssp CCCEEEEEEEE--SSEEEEESCC--------------CCSEEEECTTCEEEECTTSCSSSSEEEEECTTSCEEEEECSCH
T ss_pred CCceEEEEEEe--CCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCCCCCCCcEEEEEcCCCCEEEEECCCH
Confidence 46888889886 5789999987 3589999999999987654433 469999875 6799999999
Q ss_pred hhHHHHHHHHHHHhHhCCc
Q 042453 68 RDRVAWIQALVSTRSLYPL 86 (666)
Q Consensus 68 ~~r~~Wi~al~~~~~~~~~ 86 (666)
+|++.||+||+.++.+.|+
T Consensus 110 ~e~~~Wi~aI~~~i~~~~~ 128 (129)
T 2p0d_A 110 TELRAWHRALRTVIERLVR 128 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccC
Confidence 9999999999999987653
No 23
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=98.79 E-value=2.1e-08 Score=90.05 Aligned_cols=81 Identities=15% Similarity=0.163 Sum_probs=68.4
Q ss_pred ccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecCCC--CccEEEEeCC----------------------c
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESKSD--DRRFYIFTAT----------------------K 58 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~~d--~~~f~i~~~~----------------------~ 58 (666)
-.||-|-|||. .+.|.||++++ ..++|+|.|..+.|...++. +..|.|.+.. +
T Consensus 19 ~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r 96 (127)
T 1fgy_A 19 KTWKRRWFILT--DNCLYYFEYTTDKEPRGIIPLENLSIREVLDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHV 96 (127)
T ss_dssp CCEEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCS
T ss_pred CCeEEEEEEEE--CCEEEEeCCCCCCCcceEEECCceEEEEccCCCCCceEEEecCCccccccccccccCCcceecCCce
Confidence 46999999997 46899999776 58999999999988775543 4578887653 6
Q ss_pred EEEEEcCChhhHHHHHHHHHHHhHhCCc
Q 042453 59 TLHLRTNSRRDRVAWIQALVSTRSLYPL 86 (666)
Q Consensus 59 ~~~lra~~~~~r~~Wi~al~~~~~~~~~ 86 (666)
+++|+|+|.+|+.+||+||+.++...|.
T Consensus 97 ~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 124 (127)
T 1fgy_A 97 VYRISAPSPEEKEEWMKSIKASISRDPF 124 (127)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHHCTT
T ss_pred EEEEECCCHHHHHHHHHHHHHHhccCCc
Confidence 8999999999999999999999998774
No 24
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=1.7e-08 Score=89.20 Aligned_cols=80 Identities=19% Similarity=0.163 Sum_probs=66.6
Q ss_pred ccceeeeeeeecCCCceeEEeccC-CccceeEEeeee-EEeecCC---CCccEEEEeCCcEEEEEcCChhhHHHHHHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIIS-SFRESKS---DDRRFYIFTATKTLHLRTNSRRDRVAWIQALV 78 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a-~i~~~~~---d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~ 78 (666)
-.||-|-|||.. +.|.||+++. ..+.|+|.|..+ .|...++ .+..|.|.+.+++++|+|+|.+|+.+||+||+
T Consensus 22 ~~Wk~R~fvL~~--~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~ 99 (115)
T 2dn6_A 22 KNWTERWFVLKP--NIISYYVSEDLKDKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIH 99 (115)
T ss_dssp SCEEEEEEEECS--SCEEEESSTTCSSEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHH
T ss_pred CCcEEeEEEEEC--CEEEEeCCCCCcccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHH
Confidence 468999999874 6899999765 589999999963 4544332 34689999999999999999999999999999
Q ss_pred HHhHhCC
Q 042453 79 STRSLYP 85 (666)
Q Consensus 79 ~~~~~~~ 85 (666)
.++....
T Consensus 100 ~~~~~~~ 106 (115)
T 2dn6_A 100 STIHLLK 106 (115)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988765
No 25
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=1.3e-08 Score=90.21 Aligned_cols=81 Identities=15% Similarity=0.204 Sum_probs=65.7
Q ss_pred cccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecCC-C----CccEEEEe-CCcEEEEEcCChhhHHHHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESKS-D----DRRFYIFT-ATKTLHLRTNSRRDRVAWIQ 75 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~~-d----~~~f~i~~-~~~~~~lra~~~~~r~~Wi~ 75 (666)
.-.||-|-|||. .+.|.||+++. ..+.|+|.|..+.|..... | +..|.|.+ +.++++|+|+|.+|+.+||+
T Consensus 25 ~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ 102 (117)
T 2d9y_A 25 VKQWNKRWFVLV--DRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQ 102 (117)
T ss_dssp SSCEEEEEEEEE--TTEEEEESSTTCCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHH
T ss_pred CCCceEEEEEEC--CCEEEEECCCCCCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHH
Confidence 346999999985 67999998765 5899999999988765422 2 23799964 57999999999999999999
Q ss_pred HHHHHhHhCC
Q 042453 76 ALVSTRSLYP 85 (666)
Q Consensus 76 al~~~~~~~~ 85 (666)
||+.|+....
T Consensus 103 al~~~~~~~~ 112 (117)
T 2d9y_A 103 AMGEAARVQS 112 (117)
T ss_dssp HHHHTTCCTT
T ss_pred HHHHHHhhcc
Confidence 9999976554
No 26
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.76 E-value=2.5e-08 Score=91.40 Aligned_cols=80 Identities=18% Similarity=0.150 Sum_probs=63.4
Q ss_pred cccceeeeeeeecCCCceeEEeccCC-ccceeEEeeee--EEee-----------cCCCCccEEEEe-CCcEEEEEcCCh
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEGIIS--SFRE-----------SKSDDRRFYIFT-ATKTLHLRTNSR 67 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L~~a--~i~~-----------~~~d~~~f~i~~-~~~~~~lra~~~ 67 (666)
+..||-|-|||. ..+.|.||+++.. .+.|.|.|.+. .|.. ....+..|.|.+ +++++||+|+|.
T Consensus 21 ~k~WkkRwFVL~-~~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I~~~~~r~~~l~A~s~ 99 (130)
T 2d9v_A 21 LRRWKRNWFALW-LDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETR 99 (130)
T ss_dssp SCCEEEEEEEEE-TTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEEEETTSCEEEEECSSH
T ss_pred cCCceeeEEEEc-cCCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCCCCCcCcEEEEEeCCCCEEEEEcCCH
Confidence 457999999995 4578999998874 68999988742 2221 123456899999 568999999999
Q ss_pred hhHHHHHHHHHHHhHh
Q 042453 68 RDRVAWIQALVSTRSL 83 (666)
Q Consensus 68 ~~r~~Wi~al~~~~~~ 83 (666)
+|+++||+||+.|+..
T Consensus 100 ~e~~~Wi~al~~a~~~ 115 (130)
T 2d9v_A 100 DDAIAWKTALMEANST 115 (130)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcC
Confidence 9999999999999864
No 27
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=98.74 E-value=2.4e-08 Score=93.07 Aligned_cols=80 Identities=16% Similarity=0.072 Sum_probs=66.4
Q ss_pred ccceeeeeeeecCCCceeEEeccCC-ccceeEEeeeeEEeecCC---C---CccEEEEeCC-cEEEEEcCChhhHHHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEGIISSFRESKS---D---DRRFYIFTAT-KTLHLRTNSRRDRVAWIQ 75 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L~~a~i~~~~~---d---~~~f~i~~~~-~~~~lra~~~~~r~~Wi~ 75 (666)
..||-|-|||. .+.|.||+++.. .++|+|.|..+.+..... + +..|.|.+.+ ++++|+|+|.+|+.+||+
T Consensus 35 k~WkkR~fvL~--~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~ 112 (148)
T 1u5f_A 35 FEWQKRWCALS--KTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQ 112 (148)
T ss_dssp CSEEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHH
T ss_pred CCceeEEEEEE--CCEEEEEcCCCCcccceEEEcCCcEEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHH
Confidence 47999999996 578999998774 789999999999886432 3 3579999976 899999999999999999
Q ss_pred HHHHHhHhCC
Q 042453 76 ALVSTRSLYP 85 (666)
Q Consensus 76 al~~~~~~~~ 85 (666)
||+.|+....
T Consensus 113 al~~~i~~~~ 122 (148)
T 1u5f_A 113 QLKFILQDLG 122 (148)
T ss_dssp HHHHHCC---
T ss_pred HHHHHHHHhc
Confidence 9999976543
No 28
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=98.72 E-value=2.8e-08 Score=90.57 Aligned_cols=80 Identities=19% Similarity=0.198 Sum_probs=57.0
Q ss_pred cccceeeeeeeecCCCceeEEeccC----CccceeEEeeeeEEee----------------------cCCCCccEEEEeC
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG----SLAFGDLEGIISSFRE----------------------SKSDDRRFYIFTA 56 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~----~~~~G~i~L~~a~i~~----------------------~~~d~~~f~i~~~ 56 (666)
.-+||-|-|||.. .+.|.||+++. ....+.|.|..+.+.. .+.++..|.|.+.
T Consensus 19 ~k~WkkRwFvL~~-~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~ 97 (128)
T 2rlo_A 19 NKEWKKKYVTLSS-NGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSS 97 (128)
T ss_dssp TCCEEEEEEEEET-TTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECT
T ss_pred cCCccEEEEEEeC-CCEEEEecchhhhccccCCCeeeeeeeEEecCCCccccccccccccccccccccccCCceEEEEcC
Confidence 3579999999973 34577776521 1122344444433321 1256789999998
Q ss_pred C-cEEEEEcCChhhHHHHHHHHHHHhHh
Q 042453 57 T-KTLHLRTNSRRDRVAWIQALVSTRSL 83 (666)
Q Consensus 57 ~-~~~~lra~~~~~r~~Wi~al~~~~~~ 83 (666)
+ +++||+|+|.+||++||+||+.++..
T Consensus 98 ~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 98 TGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp TSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 7 89999999999999999999999765
No 29
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=98.71 E-value=3.8e-08 Score=88.10 Aligned_cols=78 Identities=15% Similarity=0.087 Sum_probs=65.2
Q ss_pred ccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecCCC-----CccEEEEeCC-cEEEEEcCChhhHHHHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESKSD-----DRRFYIFTAT-KTLHLRTNSRRDRVAWIQA 76 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~~d-----~~~f~i~~~~-~~~~lra~~~~~r~~Wi~a 76 (666)
..||-|-|||. .+.|.||+++. ..+.|+|.|..+.|.....+ ...|.|.+.+ ++++|+|+|.+|+.+||+|
T Consensus 26 ~~WkkR~fvL~--~~~L~yy~~~~~~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~a 103 (123)
T 1upq_A 26 RLWKRRWFVLS--GHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRA 103 (123)
T ss_dssp CCEEEEEEEEE--TTEEEEESSTTCCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHH
T ss_pred CCceeEEEEEe--CCEEEEECCCCCcccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHH
Confidence 47999999995 68999998766 58999999999998887532 3457777765 8999999999999999999
Q ss_pred HHHHhHh
Q 042453 77 LVSTRSL 83 (666)
Q Consensus 77 l~~~~~~ 83 (666)
|+.|+..
T Consensus 104 l~~a~~~ 110 (123)
T 1upq_A 104 LGRASRA 110 (123)
T ss_dssp HHHHHC-
T ss_pred HHHHHhc
Confidence 9999754
No 30
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.71 E-value=2.5e-08 Score=87.84 Aligned_cols=78 Identities=18% Similarity=0.092 Sum_probs=62.0
Q ss_pred ccceeeeeeeecCCCceeEEeccCCc--cceeEEeeeeEEeecCC--CCccEEEEeC-CcEEEEEcCChhhHHHHHHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVGSL--AFGDLEGIISSFRESKS--DDRRFYIFTA-TKTLHLRTNSRRDRVAWIQALV 78 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~~~--~~G~i~L~~a~i~~~~~--d~~~f~i~~~-~~~~~lra~~~~~r~~Wi~al~ 78 (666)
..||-|-|||.. +.|.||++++.. +.|.|.|..+.|...++ .+..|.|.++ .++++|+|+|.+|+.+||+||+
T Consensus 20 k~Wk~RwfvL~~--~~L~yyk~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~ 97 (107)
T 2cof_A 20 SQWKSRWCSVRD--NHLHFYQDRNRSKVAQQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLL 97 (107)
T ss_dssp TEEEEEEEEECS--SCEEEECSSTTCSEEEEEECTTTCEEECCCBTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHH
T ss_pred CCcceEEEEEEC--CEEEEEeCCcccCCCeeEEeccceEEEECCCCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHH
Confidence 479999999875 499999988754 45556677776655443 3467999998 7889999999999999999999
Q ss_pred HHhHh
Q 042453 79 STRSL 83 (666)
Q Consensus 79 ~~~~~ 83 (666)
.+...
T Consensus 98 ~~~~~ 102 (107)
T 2cof_A 98 SESGS 102 (107)
T ss_dssp HHSSC
T ss_pred HHHcC
Confidence 98554
No 31
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=98.70 E-value=3.6e-08 Score=87.07 Aligned_cols=79 Identities=16% Similarity=0.130 Sum_probs=61.9
Q ss_pred cccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEe-----------ecCCC--CccEEEEeC-CcEEEEEcCCh
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFR-----------ESKSD--DRRFYIFTA-TKTLHLRTNSR 67 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~-----------~~~~d--~~~f~i~~~-~~~~~lra~~~ 67 (666)
+-.||-|-|||+ ..+.|.||+++. ..+.|+|.|....|. ..+.. +..|.|.+. .++++|+|+|.
T Consensus 18 ~k~WkkR~fvL~-~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~~~r~~~l~a~s~ 96 (112)
T 3aj4_A 18 LKRWKKNWFDLW-SDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDGKTISLCAEST 96 (112)
T ss_dssp SCCEEEEEEEEC-TTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEETTSCEEEEECSSH
T ss_pred CCCeeceEEEEe-eCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcEEEEEecCCcEEEEEeCCH
Confidence 357999999986 567899999887 578898888765432 11111 348999864 89999999999
Q ss_pred hhHHHHHHHHHHHhH
Q 042453 68 RDRVAWIQALVSTRS 82 (666)
Q Consensus 68 ~~r~~Wi~al~~~~~ 82 (666)
+|+.+||+||+.|+.
T Consensus 97 ~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 97 DDCLAWKFTLQDSRT 111 (112)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999863
No 32
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.68 E-value=5.4e-08 Score=89.38 Aligned_cols=83 Identities=20% Similarity=0.206 Sum_probs=65.3
Q ss_pred cccceeeeeeeecCCCceeEE-ec-----cCCccceeEEeee-eEEeecC-----CCCccEEEEeCCcEEEEEcCChhhH
Q 042453 3 IEDEKLRIFFELLTLPGSHFL-SS-----VGSLAFGDLEGII-SSFRESK-----SDDRRFYIFTATKTLHLRTNSRRDR 70 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~-~~-----~~~~~~G~i~L~~-a~i~~~~-----~d~~~f~i~~~~~~~~lra~~~~~r 70 (666)
+..||=|-|||....+.+.|| +. ++..+.|+|.|.. ..|.... .....|.|.++.++++|+|+|.+|+
T Consensus 29 ~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~ 108 (126)
T 1v5p_A 29 SGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDL 108 (126)
T ss_dssp SSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEECSSCEEEEECSSHHHH
T ss_pred CCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEEEEECCCEEEEEECCCHHHH
Confidence 468999999998655666666 54 4679999999987 4444332 1224799999999999999999999
Q ss_pred HHHHHHHHHHhHhCC
Q 042453 71 VAWIQALVSTRSLYP 85 (666)
Q Consensus 71 ~~Wi~al~~~~~~~~ 85 (666)
+.||+||..|...-|
T Consensus 109 ~~Wi~al~~a~~~~~ 123 (126)
T 1v5p_A 109 KDWVEALNQASKSGP 123 (126)
T ss_dssp HHHHHHHHHTTTTSS
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999976544
No 33
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=2.8e-08 Score=88.86 Aligned_cols=78 Identities=15% Similarity=0.190 Sum_probs=63.5
Q ss_pred ccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecC-C----CCccEEEEe-CCcEEEEEcCChhhHHHHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESK-S----DDRRFYIFT-ATKTLHLRTNSRRDRVAWIQA 76 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~-~----d~~~f~i~~-~~~~~~lra~~~~~r~~Wi~a 76 (666)
..||-|-|||. .+.|.||++.. ..+.|+|.|..+.|.... . .+..|.|.+ +.++++|+|+|.+|+.+||+|
T Consensus 37 ~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~a 114 (122)
T 2yry_A 37 KQWNKRWFVLV--DRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQA 114 (122)
T ss_dssp CCEEEEEEEEE--TTEEEEESSTTCCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHH
T ss_pred CCcEEEEEEEe--CCEEEEECCCCCCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHH
Confidence 47999999985 57999998655 589999999988765442 2 234899965 579999999999999999999
Q ss_pred HHHHhHh
Q 042453 77 LVSTRSL 83 (666)
Q Consensus 77 l~~~~~~ 83 (666)
|+.|...
T Consensus 115 l~~a~~~ 121 (122)
T 2yry_A 115 MGEAARV 121 (122)
T ss_dssp HHHHHCC
T ss_pred HHHHHhc
Confidence 9998643
No 34
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=98.68 E-value=3.7e-08 Score=88.82 Aligned_cols=79 Identities=13% Similarity=0.079 Sum_probs=66.0
Q ss_pred cccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecCC-----CCccEEEEeCC-cEEEEEcCChhhHHHHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESKS-----DDRRFYIFTAT-KTLHLRTNSRRDRVAWIQ 75 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~~-----d~~~f~i~~~~-~~~~lra~~~~~r~~Wi~ 75 (666)
+-.||-|-|||. .+.|.||+++. ..+.|+|.|..+.|..... .+..|.|.+.. ++++|+|+|.+|+.+||+
T Consensus 35 ~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ 112 (128)
T 2dkp_A 35 MKLWKKRWFVLS--DLCLFYYRDEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMK 112 (128)
T ss_dssp SCCEEEEEEEEE--TTEEEEESSTTCCSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHH
T ss_pred CCCceeEEEEEe--CCEEEEECCCCCcccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHH
Confidence 357999999985 67999999775 5899999999988876542 23479999874 899999999999999999
Q ss_pred HHHHHhHh
Q 042453 76 ALVSTRSL 83 (666)
Q Consensus 76 al~~~~~~ 83 (666)
||+.|...
T Consensus 113 al~~a~~~ 120 (128)
T 2dkp_A 113 AMLDAALV 120 (128)
T ss_dssp HHHHHHSC
T ss_pred HHHHHHhc
Confidence 99998654
No 35
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.67 E-value=4e-08 Score=91.52 Aligned_cols=82 Identities=15% Similarity=0.036 Sum_probs=68.8
Q ss_pred ccceeeeeeeecCCC---ceeEEeccC--CccceeEEeeeeEEeecCC--CCccEEEEeCC-cEEEEEcCChhhHHHHHH
Q 042453 4 EDEKLRIFFELLTLP---GSHFLSSVG--SLAFGDLEGIISSFRESKS--DDRRFYIFTAT-KTLHLRTNSRRDRVAWIQ 75 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~---~l~y~~~~~--~~~~G~i~L~~a~i~~~~~--d~~~f~i~~~~-~~~~lra~~~~~r~~Wi~ 75 (666)
..||-|-|||.-..+ .|.||+.+. ..+.|+|.|..+.+...+. .+..|.|.+.. ++++|+|+|.+|+..||.
T Consensus 38 k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~ 117 (150)
T 1wg7_A 38 RSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNNKVRRFAFELKMQDKSSYLLAADSEVEMEEWIT 117 (150)
T ss_dssp SSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCCCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHH
T ss_pred cCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccCEEEecCCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHH
Confidence 479999999987643 899999875 5899999999988876544 44679999985 899999999999999999
Q ss_pred HHHHHhHhCC
Q 042453 76 ALVSTRSLYP 85 (666)
Q Consensus 76 al~~~~~~~~ 85 (666)
||+.|+....
T Consensus 118 al~~ai~~~~ 127 (150)
T 1wg7_A 118 ILNKILQLNF 127 (150)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 9999976543
No 36
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=98.63 E-value=5.7e-08 Score=84.52 Aligned_cols=76 Identities=9% Similarity=-0.023 Sum_probs=61.5
Q ss_pred cccceeeeeeeecCCCceeEEeccC-----C--ccceeEEeeeeEEeecCCC---CccEEEEeCC-cEEEEEcCChhhHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG-----S--LAFGDLEGIISSFRESKSD---DRRFYIFTAT-KTLHLRTNSRRDRV 71 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~-----~--~~~G~i~L~~a~i~~~~~d---~~~f~i~~~~-~~~~lra~~~~~r~ 71 (666)
.-.||-|-|||. .+.|.||+++. . .+.+.|.|..|.+.....+ +..|.|.+.. ++++|+|+|.+|+.
T Consensus 20 ~~~Wk~rwfvL~--~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~ 97 (106)
T 1btn_A 20 SRSWHNVYCVIN--NQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMN 97 (106)
T ss_dssp CCCCEEEEEEEE--TTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHH
T ss_pred CCChhEEEEEEE--CCEEEEEeCCcccccCCCCCCcceEECCCCEEEEcccccCCccEEEEEecCCCEEEEECCCHHHHH
Confidence 357999999996 57999998775 2 3677899988877654333 5579999764 89999999999999
Q ss_pred HHHHHHHHH
Q 042453 72 AWIQALVST 80 (666)
Q Consensus 72 ~Wi~al~~~ 80 (666)
.||+||++|
T Consensus 98 ~Wi~ai~~A 106 (106)
T 1btn_A 98 TWIQAISSA 106 (106)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcC
Confidence 999999975
No 37
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.62 E-value=5.7e-08 Score=92.02 Aligned_cols=79 Identities=10% Similarity=0.116 Sum_probs=66.9
Q ss_pred cccceeeeeeeecCCCceeEEeccCC-ccceeEEeeeeEEeecC--C--CCccEEEEeCCcEEEEEcCChhhHHHHHHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEGIISSFRESK--S--DDRRFYIFTATKTLHLRTNSRRDRVAWIQAL 77 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L~~a~i~~~~--~--d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al 77 (666)
+..||-|-|||.- +.|.||+.+.. .+.|.|.|..+++..++ . ....|.|.+..++++|.|+|.+|+++||+||
T Consensus 31 ~k~WkrRWFvLk~--~~L~Yyk~~~d~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI 108 (149)
T 1x1f_A 31 YREYEHYWTELRG--TTLFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFI 108 (149)
T ss_dssp CCSCEEEEEEEET--TEEEEESCSSCSSCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHH
T ss_pred CCCceeEEEEEcC--CEEEEEeCCCccccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHH
Confidence 4679999999964 69999998765 67799999998877432 1 2458999999999999999999999999999
Q ss_pred HHHhHh
Q 042453 78 VSTRSL 83 (666)
Q Consensus 78 ~~~~~~ 83 (666)
+.+...
T Consensus 109 ~~v~~~ 114 (149)
T 1x1f_A 109 LTVTEL 114 (149)
T ss_dssp HHHHHS
T ss_pred HHHHcc
Confidence 999775
No 38
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=98.58 E-value=3.6e-08 Score=88.87 Aligned_cols=83 Identities=11% Similarity=0.005 Sum_probs=66.6
Q ss_pred cccceeeeeeeecCCCceeEEeccCC-ccceeEEeeeeEEe------ecCCCCccEEEEe----CCcEEEEEcCChhhHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEGIISSFR------ESKSDDRRFYIFT----ATKTLHLRTNSRRDRV 71 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L~~a~i~------~~~~d~~~f~i~~----~~~~~~lra~~~~~r~ 71 (666)
+..||-|-|||.- .+.|.||+.+.. .++|.|.|..+.+. .+...+..|.|.+ ..++++|+|+|.+|+.
T Consensus 21 ~k~WkkRwfvL~~-~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~ 99 (125)
T 1unq_A 21 IKTWRPRYFLLKN-DGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEERE 99 (125)
T ss_dssp SCCEEEEEEEEET-TSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHH
T ss_pred ccCccCcEEEEec-CCEEEEEeCCCCCCCCceeEccceeEEeeeecccccCCCCEEEEEecCCCCceeEEEEeCCHHHHH
Confidence 3579999999862 358999998765 77899988887654 2345567899985 4678999999999999
Q ss_pred HHHHHHHHHhHhCCc
Q 042453 72 AWIQALVSTRSLYPL 86 (666)
Q Consensus 72 ~Wi~al~~~~~~~~~ 86 (666)
+||+||+.++...+.
T Consensus 100 ~Wi~al~~~~~~~~~ 114 (125)
T 1unq_A 100 EWTTAIQTVADGLKK 114 (125)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccc
Confidence 999999999887654
No 39
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=98.56 E-value=1.3e-07 Score=94.24 Aligned_cols=79 Identities=16% Similarity=0.055 Sum_probs=67.3
Q ss_pred cccceeeeeeeecCCCceeEEeccCC-ccceeEEeeeeEEeecC---CC---CccEEEEeCC-cEEEEEcCChhhHHHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEGIISSFRESK---SD---DRRFYIFTAT-KTLHLRTNSRRDRVAWI 74 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L~~a~i~~~~---~d---~~~f~i~~~~-~~~~lra~~~~~r~~Wi 74 (666)
.-.||-|-|||. .+.|.||+++.. .+.|+|.|..+.+.... .+ +..|.|.+.+ ++++|+|+|.+|+.+||
T Consensus 123 ~k~WkkRwfVL~--~~~L~Yyk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi 200 (211)
T 1u5e_A 123 GFEWQKRWCALS--KTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWV 200 (211)
T ss_dssp TCCCEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHH
T ss_pred CCCcEeEEEEEE--CCEEEEEcCCCCccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHH
Confidence 347999999996 568999998875 78999999999998752 23 4579999975 99999999999999999
Q ss_pred HHHHHHhHh
Q 042453 75 QALVSTRSL 83 (666)
Q Consensus 75 ~al~~~~~~ 83 (666)
+||+.|+..
T Consensus 201 ~aL~~ai~~ 209 (211)
T 1u5e_A 201 QQLKFILQD 209 (211)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999999764
No 40
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.56 E-value=1.2e-07 Score=95.33 Aligned_cols=78 Identities=19% Similarity=0.190 Sum_probs=68.6
Q ss_pred ccceeeeeeeecCCCceeEEeccCC-ccceeEEeeeeEEeec-CCCCccEEEEeCCcEEEEEcCChhhHHHHHHHHHHHh
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEGIISSFRES-KSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTR 81 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L~~a~i~~~-~~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~~~~ 81 (666)
..||-|-|||. .+.|.||+++.. .++|+|.|..+.+..+ ...+..|.|.++.++++|+|+|.+|+.+||+||+.++
T Consensus 77 k~WkkRwfvL~--~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i 154 (228)
T 3tfm_A 77 RNWKKRWFVLR--QSKLMYFENDSEEKLKGTVEVRSAKEIIDNTNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVH 154 (228)
T ss_dssp GGCEEEEEEEC--SSEEEEESSTTCCSEEEEEEGGGCSEEEEETTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEe--CCEEEEEeCCCCcceeEEEEcCCCEEeccCCCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 67999999987 579999998875 8999999999987654 3445689999999999999999999999999999998
Q ss_pred Hh
Q 042453 82 SL 83 (666)
Q Consensus 82 ~~ 83 (666)
..
T Consensus 155 ~~ 156 (228)
T 3tfm_A 155 SS 156 (228)
T ss_dssp TC
T ss_pred hc
Confidence 64
No 41
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=98.54 E-value=1.2e-07 Score=90.20 Aligned_cols=78 Identities=13% Similarity=0.066 Sum_probs=58.1
Q ss_pred ccceeeeeeeecCCCceeEEeccCC---ccceeEEeee--eEEeecC---CCCccEEEEeCCcEEEEEcCChhhHHHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVGS---LAFGDLEGII--SSFRESK---SDDRRFYIFTATKTLHLRTNSRRDRVAWIQ 75 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~~---~~~G~i~L~~--a~i~~~~---~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~ 75 (666)
-.||-|-|||. .+.|.||+.+.. .+.|+|.|.. +.+.+.. ..+..|.|.+.+++++|+|+|.+|+.+||+
T Consensus 27 k~WkkRwfvL~--~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ 104 (168)
T 2j59_M 27 RPWKQMYVVLR--GHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIK 104 (168)
T ss_dssp -CCEEEEEEEE--TTEEEEESCTTCC--------CEECSSCEEEECSSSCSCSSEEEEECSSCEEEEECSSHHHHHHHHH
T ss_pred CCceEEEEEEe--CCEEEEEECCcccccccCCceEecccceEEEeccccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHH
Confidence 46999999996 468999998854 6789987776 5543333 235689999999999999999999999999
Q ss_pred HHHHHhHh
Q 042453 76 ALVSTRSL 83 (666)
Q Consensus 76 al~~~~~~ 83 (666)
||+.++..
T Consensus 105 ai~~~~~~ 112 (168)
T 2j59_M 105 TIQESSNL 112 (168)
T ss_dssp HHHHHCCC
T ss_pred HHHHHHhc
Confidence 99999654
No 42
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=98.51 E-value=2.1e-07 Score=84.77 Aligned_cols=80 Identities=11% Similarity=0.066 Sum_probs=63.3
Q ss_pred ccceeeeeeeecCCCceeEEeccC----------CccceeEEeeeeEEeecCCCC----ccEEEEeC---CcEEEEEcCC
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG----------SLAFGDLEGIISSFRESKSDD----RRFYIFTA---TKTLHLRTNS 66 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~----------~~~~G~i~L~~a~i~~~~~d~----~~f~i~~~---~~~~~lra~~ 66 (666)
-.||-|-|||. .+.|.||+.+. ..++|.|.|..+.|....++. -.|.|.+. +.+++|.|+|
T Consensus 26 k~Wk~RwfVL~--~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~~~~~~~~A~s 103 (124)
T 2w2x_D 26 QKWTRHFCAIA--DAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFILEPKQQGDPPVEFATDK 103 (124)
T ss_dssp TEEEEEEEEEE--TTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEEEECC--CCCEEEEECC
T ss_pred CCceEeEEEEE--CCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEEEECCCCCCceEEEEECC
Confidence 46999999996 55699998742 345999999999998877632 35888775 3579999999
Q ss_pred hhhHHHHHHHHHHHhHhCC
Q 042453 67 RRDRVAWIQALVSTRSLYP 85 (666)
Q Consensus 67 ~~~r~~Wi~al~~~~~~~~ 85 (666)
.+|+++||+||+.|....+
T Consensus 104 ~ee~~~Wi~ai~~a~~~~~ 122 (124)
T 2w2x_D 104 VEELFEWFQSIREITWKID 122 (124)
T ss_dssp CHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999976654
No 43
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=98.50 E-value=1.6e-07 Score=96.81 Aligned_cols=81 Identities=10% Similarity=0.106 Sum_probs=66.5
Q ss_pred cceeeeeeeecC-----CCceeEEeccCC------ccceeEEeeeeEEe-e--cCCCCccEEEEeCCcEEEEEcCChhhH
Q 042453 5 DEKLRIFFELLT-----LPGSHFLSSVGS------LAFGDLEGIISSFR-E--SKSDDRRFYIFTATKTLHLRTNSRRDR 70 (666)
Q Consensus 5 ~~~~~~~~~~~~-----~~~l~y~~~~~~------~~~G~i~L~~a~i~-~--~~~d~~~f~i~~~~~~~~lra~~~~~r 70 (666)
.||-|-|||... ...|.||+++.. .++|.|.|..+..+ . +...+..|.|.|..++++|.|+|.+|+
T Consensus 21 ~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F~I~t~~rty~l~A~se~e~ 100 (264)
T 1qqg_A 21 SMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADSKNKHLVALYTRDEHFAIAADSEAEQ 100 (264)
T ss_dssp TCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECCSSCSSEEEEEESSCEEEEECSSHHHH
T ss_pred CCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccCCCCCcEEEEEECCEEEEEEeCCHHHH
Confidence 699999999987 669999998764 79999999987633 2 334466899999999999999999999
Q ss_pred HHHHHHHHHHhHhCC
Q 042453 71 VAWIQALVSTRSLYP 85 (666)
Q Consensus 71 ~~Wi~al~~~~~~~~ 85 (666)
.+||+||+.++....
T Consensus 101 ~~Wi~aL~~~~~~~k 115 (264)
T 1qqg_A 101 DSWYQALLQLHNRAK 115 (264)
T ss_dssp HHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999976543
No 44
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=98.49 E-value=3e-07 Score=83.58 Aligned_cols=79 Identities=11% Similarity=0.091 Sum_probs=63.2
Q ss_pred ccceeeeeeeecCCCceeEEecc----CCccceeEEeeeeE---EeecCC----CCccEEEEeC--C-------------
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSV----GSLAFGDLEGIISS---FRESKS----DDRRFYIFTA--T------------- 57 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~----~~~~~G~i~L~~a~---i~~~~~----d~~~f~i~~~--~------------- 57 (666)
-.||-|-|||.- +.|.||+++ ...|.|.|.|..+. |...+. .+..|.|.+. .
T Consensus 21 ~~WkrRwfvL~~--~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~ 98 (134)
T 2y7b_A 21 GAWHRRWCVLSG--NCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQCR 98 (134)
T ss_dssp EEEEEEEEEEET--TEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEEE
T ss_pred CCcEEEEEEEEC--CEEEEECCCCcccccCceEEEEhhhCccccccccchhhccCCCEEEEEecCCCccccccccccccc
Confidence 469999999974 599999854 36999999999987 444432 3567999872 2
Q ss_pred -----cEEEEEcCChhhHHHHHHHHHHHhHhC
Q 042453 58 -----KTLHLRTNSRRDRVAWIQALVSTRSLY 84 (666)
Q Consensus 58 -----~~~~lra~~~~~r~~Wi~al~~~~~~~ 84 (666)
.+++|+|+|.+|+.+||+||+.|+...
T Consensus 99 ~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~~ 130 (134)
T 2y7b_A 99 DTLCVTKNWLSADTKEERDLWMQKLNQVLVDI 130 (134)
T ss_dssp TTEEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 379999999999999999999998654
No 45
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=98.43 E-value=4.1e-07 Score=93.75 Aligned_cols=82 Identities=13% Similarity=0.009 Sum_probs=69.0
Q ss_pred cccceeeeeeeecCCCceeEEecc-------CCccceeEEeeeeEEeecCCC---CccEEEEe-CCcEEEEEcCChhhHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSV-------GSLAFGDLEGIISSFRESKSD---DRRFYIFT-ATKTLHLRTNSRRDRV 71 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~-------~~~~~G~i~L~~a~i~~~~~d---~~~f~i~~-~~~~~~lra~~~~~r~ 71 (666)
+-.||-|-|||.- +.|.||+.+ +..+.|+|.|.++.|....++ +..|.|.+ ++++++|+|+|.+|++
T Consensus 36 ~K~WkrRWfVL~~--~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~ 113 (263)
T 3a8p_A 36 RRKWKQYWVTLKG--CTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLE 113 (263)
T ss_dssp TCCCEEEEEEEET--TEEEEESSCCC------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTSCEEEEECSSHHHHH
T ss_pred CCCceEEEEEEcC--CEEEEEecCcccccccccCccceEEcCCcEEEECCcCCCCCCEEEEEcCCCcEEEEEcCCHHHHH
Confidence 5689999999875 489999974 468899999999888754443 56799999 6899999999999999
Q ss_pred HHHHHHHHHhHhCCc
Q 042453 72 AWIQALVSTRSLYPL 86 (666)
Q Consensus 72 ~Wi~al~~~~~~~~~ 86 (666)
.||+||+.+...++.
T Consensus 114 ~Wi~aI~~a~~~~~~ 128 (263)
T 3a8p_A 114 NWVTAIHSACASLFA 128 (263)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc
Confidence 999999999988763
No 46
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=98.39 E-value=3.7e-07 Score=99.01 Aligned_cols=78 Identities=14% Similarity=0.104 Sum_probs=64.7
Q ss_pred ccceeeeeeeecCCCceeEEeccCC-ccceeEEeeeeEEe----e--cCCC-----CccEEEEeCCcEEEEEcCChhhHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEGIISSFR----E--SKSD-----DRRFYIFTATKTLHLRTNSRRDRV 71 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L~~a~i~----~--~~~d-----~~~f~i~~~~~~~~lra~~~~~r~ 71 (666)
.+||-|-|||. .+.|.||+++.. .++|.|.|..+..+ . .... +..|.|.|..++++|+|+|.+||.
T Consensus 284 k~WKkRwFVL~--~~~L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~ 361 (386)
T 3lju_X 284 EGFRKRWFTMD--DRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQR 361 (386)
T ss_dssp SCCEEEEEEEE--TTEEEEESSTTCSBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHH
T ss_pred CCCcccEEEEE--CCEEEEEecCCCcccceEEEeecceeeeeecccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHH
Confidence 57999999998 889999998875 68999999544322 1 1121 356999999999999999999999
Q ss_pred HHHHHHHHHhHh
Q 042453 72 AWIQALVSTRSL 83 (666)
Q Consensus 72 ~Wi~al~~~~~~ 83 (666)
+||+||+.++.+
T Consensus 362 ~Wi~aL~~~i~~ 373 (386)
T 3lju_X 362 EWVAAFQKAVDR 373 (386)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 999999999887
No 47
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.39 E-value=5.5e-07 Score=81.03 Aligned_cols=81 Identities=7% Similarity=0.007 Sum_probs=64.0
Q ss_pred cccceeeeeeeecCCCceeEEeccCCc-----cce--eEEeeeeEEeecCC---CCccEEEEeCC-cEEEEEcCChhhHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGSL-----AFG--DLEGIISSFRESKS---DDRRFYIFTAT-KTLHLRTNSRRDRV 71 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~~-----~~G--~i~L~~a~i~~~~~---d~~~f~i~~~~-~~~~lra~~~~~r~ 71 (666)
+-.||-|-|||.- +.|.||+.+... +.| .|.|..|.+....+ -+..|.|.+.. ++++|+|+|.+|++
T Consensus 29 ~~~Wk~rwfvL~~--~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~ 106 (123)
T 1wjm_A 29 NRSWQNVYCVLRR--GSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMS 106 (123)
T ss_dssp CCCCEEEEEEEET--TEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTTCSSCSSEEEEECSSSCEEEEECSSHHHHH
T ss_pred CCCccEEEEEEEC--CEEEEEEcccccccCcccCCCceEEccCcEEeecccccCCCCEEEEEEcCCcEEEEECCCHHHHH
Confidence 4679999999875 589999876542 234 58888777765533 35579998775 89999999999999
Q ss_pred HHHHHHHHHhHhCC
Q 042453 72 AWIQALVSTRSLYP 85 (666)
Q Consensus 72 ~Wi~al~~~~~~~~ 85 (666)
+||+||+.++...+
T Consensus 107 ~Wi~ai~~~~~~~~ 120 (123)
T 1wjm_A 107 SWLRVVNAAIASGP 120 (123)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhccC
Confidence 99999999988654
No 48
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.37 E-value=9.4e-07 Score=81.40 Aligned_cols=79 Identities=14% Similarity=0.133 Sum_probs=63.3
Q ss_pred ccceeeeeeeecCCCceeEEe----c-cCCccceeEEeeeeEEeec--CCC----CccEEEEeCCcEEEEEcCChhhHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLS----S-VGSLAFGDLEGIISSFRES--KSD----DRRFYIFTATKTLHLRTNSRRDRVA 72 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~----~-~~~~~~G~i~L~~a~i~~~--~~d----~~~f~i~~~~~~~~lra~~~~~r~~ 72 (666)
..||-|-|||.-. .|-||+ . +...|.|+|.|.++.|... .+| .--|.|.+.++++.|.|+|.+|+..
T Consensus 23 K~WKrRwFVL~~~--~LyYfk~~~~~~~~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~~~ty~~~Adseee~~~ 100 (126)
T 1wi1_A 23 KRWKKRFFVLVQV--SQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRIL 100 (126)
T ss_dssp CSCEEEEEEEEEE--ETTEEEEEECCSSSSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSSCEEEEECSSHHHHHH
T ss_pred cccceEEEEEeCC--EEEEEEcccccccCCCCceEEECCCcEEEEecCCcccccCceEEEEecCCceEEEEcCCHHHHHH
Confidence 5799999999854 777776 3 4469999999999988742 222 2357778888999999999999999
Q ss_pred HHHHHHHHhHhC
Q 042453 73 WIQALVSTRSLY 84 (666)
Q Consensus 73 Wi~al~~~~~~~ 84 (666)
||+||..|....
T Consensus 101 WikAi~~A~~~~ 112 (126)
T 1wi1_A 101 WVQAMYRATGQS 112 (126)
T ss_dssp HHHHHHHHHTCS
T ss_pred HHHHHHHHhccc
Confidence 999999997643
No 49
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=98.35 E-value=5.1e-07 Score=97.33 Aligned_cols=78 Identities=15% Similarity=0.104 Sum_probs=68.1
Q ss_pred cceeeeeeeecCCCceeEEeccCCccceeEEeeeeEEeecCCCCc--cEEEEeCC--cEEEEEcCChhhHHHHHHHHHHH
Q 042453 5 DEKLRIFFELLTLPGSHFLSSVGSLAFGDLEGIISSFRESKSDDR--RFYIFTAT--KTLHLRTNSRRDRVAWIQALVST 80 (666)
Q Consensus 5 ~~~~~~~~~~~~~~~l~y~~~~~~~~~G~i~L~~a~i~~~~~d~~--~f~i~~~~--~~~~lra~~~~~r~~Wi~al~~~ 80 (666)
.||-|-|||. .+.|.||+..+..+.|.|.|..|+|...+.+++ .|.|.|.+ ++++|+|+|.+||..||+||+.+
T Consensus 296 ~WkkRwfvL~--~~~L~y~k~~~~~~~~~i~l~~~~v~~~~~~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~ 373 (385)
T 2q13_A 296 TWDRQFYFTQ--GGNLMSQARGDVAGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNI 373 (385)
T ss_dssp CCEEEEEEEE--TTEEEEECSSCSSCEEEEECTTCEEEEECCTTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHH
T ss_pred CceeEEEEEE--CCEEEEecCCCcCCCceEEccceEEEeccccCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHH
Confidence 4999999976 568999999666788999999999988876665 58999988 89999999999999999999999
Q ss_pred hHhC
Q 042453 81 RSLY 84 (666)
Q Consensus 81 ~~~~ 84 (666)
+...
T Consensus 374 ~~~~ 377 (385)
T 2q13_A 374 SKQI 377 (385)
T ss_dssp HTTC
T ss_pred HHhh
Confidence 7653
No 50
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.33 E-value=1.3e-06 Score=78.85 Aligned_cols=80 Identities=9% Similarity=-0.011 Sum_probs=64.9
Q ss_pred ccceeeeeeeecCC-CceeEEecc-CCccceeEEeeeeEEeec-CCC----CccEEEEeCCcEEEEEcCChhhHHHHHHH
Q 042453 4 EDEKLRIFFELLTL-PGSHFLSSV-GSLAFGDLEGIISSFRES-KSD----DRRFYIFTATKTLHLRTNSRRDRVAWIQA 76 (666)
Q Consensus 4 ~~~~~~~~~~~~~~-~~l~y~~~~-~~~~~G~i~L~~a~i~~~-~~d----~~~f~i~~~~~~~~lra~~~~~r~~Wi~a 76 (666)
-.||=|-|||..+- -.|.||+++ +.++.|.|.|.++.|... +.+ +-.|-|..++++++|+|+|.++.++||+|
T Consensus 21 ~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~~~y~f~A~s~e~~~~Wl~a 100 (112)
T 2coc_A 21 ETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLSASSAELQQQWLET 100 (112)
T ss_dssp SCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGGCEEECCCSSSCCSSSEEEEEEETTEEEEEEESSHHHHHHHHHH
T ss_pred CCceEEEEEEECCCccEEEEECCCCccCcceEEEcCCCEEEecCcccccCCCCEEEEecCCeEEEEEcCCHHHHHHHHHH
Confidence 46999999998764 367777655 569999999999999841 111 34799999999999999999999999999
Q ss_pred HHHHhHh
Q 042453 77 LVSTRSL 83 (666)
Q Consensus 77 l~~~~~~ 83 (666)
|+.|..-
T Consensus 101 l~~A~~~ 107 (112)
T 2coc_A 101 LSTAAHS 107 (112)
T ss_dssp HHHHHSC
T ss_pred HHHHhcC
Confidence 9998544
No 51
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=98.31 E-value=1.6e-06 Score=77.47 Aligned_cols=80 Identities=13% Similarity=0.014 Sum_probs=62.9
Q ss_pred cccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEe---e--cCCCCccEEEEe-CCcEEEEEcCChhhHHHHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFR---E--SKSDDRRFYIFT-ATKTLHLRTNSRRDRVAWIQ 75 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~---~--~~~d~~~f~i~~-~~~~~~lra~~~~~r~~Wi~ 75 (666)
+..||-|-|||. .+.|.||+.+. ..+.|.|.|.++.+. . +..-+..|.|.+ +.++++|+|+|.+|.++||+
T Consensus 17 ~k~Wk~rwfvL~--~~~L~~yk~~~~~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ 94 (112)
T 3cxb_B 17 KEHWKTCFVVLS--NGILYQYPDRTDVIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQ 94 (112)
T ss_dssp CCCCEEEEEEEE--TTEEEEESSSSCCSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHH
T ss_pred CCCceEEEEEEE--CCEEEEECCCCCCCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHH
Confidence 457999999986 46899998665 488999999977543 2 223456899985 57899999999999999999
Q ss_pred HHHHHhHhC
Q 042453 76 ALVSTRSLY 84 (666)
Q Consensus 76 al~~~~~~~ 84 (666)
||+.++...
T Consensus 95 ai~~~~~~~ 103 (112)
T 3cxb_B 95 HLCQAVSKG 103 (112)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHhhcc
Confidence 999997654
No 52
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.28 E-value=9.4e-07 Score=82.25 Aligned_cols=77 Identities=10% Similarity=0.107 Sum_probs=63.4
Q ss_pred cccceeeeeeeecCCCceeEEeccCC---ccceeEEeeeeEEeecC-CCCccEEE--Ee----CCcEEEEEcCChhhHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGS---LAFGDLEGIISSFRESK-SDDRRFYI--FT----ATKTLHLRTNSRRDRVA 72 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~---~~~G~i~L~~a~i~~~~-~d~~~f~i--~~----~~~~~~lra~~~~~r~~ 72 (666)
+.+||-|.||+..+ .|.||++++. .|-|.|.|++|.|..+. -....|.| .+ |.++++|+|+|++++++
T Consensus 25 lK~~KrrWFvlk~~--~L~YyK~kee~~~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~ 102 (137)
T 2ys3_A 25 LKGYRQHWVVFKET--TLSYYKSQDEAPGDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYAR 102 (137)
T ss_dssp SSSSCCCEEEECSS--CEEEESSTTTTTSCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHHHH
T ss_pred cccceeEEEEEeCC--EEEEECCchhccCCCceEEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHHHHHH
Confidence 46889999998776 8999998887 79999999999987662 23566664 43 34889999999999999
Q ss_pred HHHHHHHHh
Q 042453 73 WIQALVSTR 81 (666)
Q Consensus 73 Wi~al~~~~ 81 (666)
||.||+-|-
T Consensus 103 WMaA~rlAs 111 (137)
T 2ys3_A 103 WMAGCRLAS 111 (137)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999873
No 53
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=98.25 E-value=1.9e-06 Score=92.13 Aligned_cols=81 Identities=15% Similarity=0.179 Sum_probs=67.8
Q ss_pred cccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecCC--CCccEEEEeC----------------------C
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESKS--DDRRFYIFTA----------------------T 57 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~~--d~~~f~i~~~----------------------~ 57 (666)
+..||-|-|||. .+.|.||+++. ..++|+|.|..+.|...+. .+..|.|.+. .
T Consensus 226 ~k~WkkRwFVL~--~~~L~Yyk~~~~~~p~G~I~L~~~~v~~~~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~ 303 (347)
T 2r09_A 226 VKTWKRRWFILT--DNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNH 303 (347)
T ss_dssp SCCEEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCC
T ss_pred cccceeEEEEEc--CCEEEEEcCCCccCCcEEEEcCCeEEEEccCCCCCCEEEEEeCCccccccccccccccccccccCc
Confidence 357999999996 46899999876 5899999999998877653 3557999875 3
Q ss_pred cEEEEEcCChhhHHHHHHHHHHHhHhCC
Q 042453 58 KTLHLRTNSRRDRVAWIQALVSTRSLYP 85 (666)
Q Consensus 58 ~~~~lra~~~~~r~~Wi~al~~~~~~~~ 85 (666)
.+++|+|+|.+|+.+||+||+.++...|
T Consensus 304 r~y~l~A~s~ee~~~Wi~aI~~ai~~~~ 331 (347)
T 2r09_A 304 VVYRISAPSPEEKEEWMKSIKASISRDP 331 (347)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHHHHCCH
T ss_pred eEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence 6899999999999999999999987654
No 54
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=98.23 E-value=1e-06 Score=95.74 Aligned_cols=79 Identities=19% Similarity=0.113 Sum_probs=68.9
Q ss_pred ccceeeeeeeecCCCceeEEeccCCccceeEEeeeeEEeecCCCCcc--EEEEeCC--cEEEEEcCChhhHHHHHHHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVGSLAFGDLEGIISSFRESKSDDRR--FYIFTAT--KTLHLRTNSRRDRVAWIQALVS 79 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~~~~~G~i~L~~a~i~~~~~d~~~--f~i~~~~--~~~~lra~~~~~r~~Wi~al~~ 79 (666)
-.|+-|-||+. .+.|.||......+.|.|.|..|+|+..+..+++ |.|.|.+ +|++|+|+|.+||..||+||+.
T Consensus 318 ~~W~rrwfvl~--~~~l~y~~~~~~~~~~~~~l~~~~v~~~~~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~ 395 (407)
T 4h8s_A 318 TTWERLYFFTQ--GGNLMCQPRGAVAGGLIQDLDNCSVMAVDCEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINN 395 (407)
T ss_dssp EEEEEEEEEEC--SSCEECCCTTCSSCCCCBCSSCCEEEEECCTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHH
T ss_pred CCceEEEEEEE--CCEEEEEeCCCCCCCeEEECCceEEEECCCCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHH
Confidence 35999999986 5789999888888999999999999999888886 7888864 5899999999999999999999
Q ss_pred HhHhC
Q 042453 80 TRSLY 84 (666)
Q Consensus 80 ~~~~~ 84 (666)
|+...
T Consensus 396 a~~~~ 400 (407)
T 4h8s_A 396 ISRQI 400 (407)
T ss_dssp HHSCC
T ss_pred HHHHh
Confidence 97653
No 55
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=98.17 E-value=1.6e-06 Score=78.15 Aligned_cols=79 Identities=5% Similarity=-0.013 Sum_probs=62.5
Q ss_pred cccceeeeeeeecCCCceeEEeccCCcc---------ceeEEeeeeEEeecCCC---CccEEEEe-CCcEEEEEcCChhh
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGSLA---------FGDLEGIISSFRESKSD---DRRFYIFT-ATKTLHLRTNSRRD 69 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~~~---------~G~i~L~~a~i~~~~~d---~~~f~i~~-~~~~~~lra~~~~~ 69 (666)
...||-|-|||.- +.|.||+.+.... .|.|.|..|.+....+. +..|.|.+ +++++.|+|+|.+|
T Consensus 29 ~~~Wk~rw~vL~~--~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~t~~~~~~lfqA~s~~e 106 (122)
T 1dro_A 29 NRSWDKVYMAAKA--GRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTE 106 (122)
T ss_dssp CCCCEEEEEEESS--SCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSSCEEEEECSSSHH
T ss_pred CCCccEEEEEEEC--CEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCCCCCCeEEEEEEcCCCEEEEECCCHHH
Confidence 3578989999864 5899999776432 37899998877654332 35799986 67899999999999
Q ss_pred HHHHHHHHHHHhHh
Q 042453 70 RVAWIQALVSTRSL 83 (666)
Q Consensus 70 r~~Wi~al~~~~~~ 83 (666)
++.||+||+.++..
T Consensus 107 ~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 107 MSQWVTSLKAQSDS 120 (122)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999765
No 56
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=98.06 E-value=1e-05 Score=73.54 Aligned_cols=76 Identities=7% Similarity=-0.078 Sum_probs=60.6
Q ss_pred cceeeeeeeecCCCceeEEeccCC-------------ccceeEEeeeeEEeecC-C---CCccEEEEeC-CcEEEEEcCC
Q 042453 5 DEKLRIFFELLTLPGSHFLSSVGS-------------LAFGDLEGIISSFRESK-S---DDRRFYIFTA-TKTLHLRTNS 66 (666)
Q Consensus 5 ~~~~~~~~~~~~~~~l~y~~~~~~-------------~~~G~i~L~~a~i~~~~-~---d~~~f~i~~~-~~~~~lra~~ 66 (666)
.|+-|-|||. .+.|.||+.+.. .+.|.|.|++|.+.... + -...|.|.+. +.++.|+|.|
T Consensus 30 ~W~~~w~VL~--~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~~~~~ylfqA~s 107 (124)
T 3pp2_A 30 HWSASWTVLE--GGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDS 107 (124)
T ss_dssp CCEEEEEEEE--TTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGGGCSSSSEEEEECTTSCEEEEECSC
T ss_pred CceEEEEEEE--CCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEecccccCCCceEEEEECCCCCEEEEECCC
Confidence 5777778875 468999986543 36788999999887753 2 2456999875 6799999999
Q ss_pred hhhHHHHHHHHHHHhH
Q 042453 67 RRDRVAWIQALVSTRS 82 (666)
Q Consensus 67 ~~~r~~Wi~al~~~~~ 82 (666)
.+|.+.||+||+.|+.
T Consensus 108 ~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 108 EAIISTWHKAIAQGIQ 123 (124)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999874
No 57
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=98.06 E-value=7e-06 Score=77.72 Aligned_cols=77 Identities=14% Similarity=0.127 Sum_probs=63.6
Q ss_pred cccceeeeeeeecCCCceeEEeccC---CccceeEEeeeeEEeec-CCCCccEEEEe------CCcEEEEEcCChhhHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG---SLAFGDLEGIISSFRES-KSDDRRFYIFT------ATKTLHLRTNSRRDRVA 72 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~---~~~~G~i~L~~a~i~~~-~~d~~~f~i~~------~~~~~~lra~~~~~r~~ 72 (666)
.-+||-|-||...+- |+||++|. +.|.|.|.|++|.|..+ .-+..+|-|-. |...++||++++.++++
T Consensus 42 LKgfKryWfv~kDt~--LsyYKSkEe~~geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~ 119 (165)
T 4bbk_A 42 LKACKQYWFVFKDTS--IAYFKNKELEQGEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYAR 119 (165)
T ss_dssp --CCEEEEEEEETTE--EEEESSGGGTTSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHH
T ss_pred cccceeEEEEEeCCE--EEEEcCHHHhcCCCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHHHH
Confidence 458899999988776 99999987 58889999999999985 55667765544 46679999999999999
Q ss_pred HHHHHHHHh
Q 042453 73 WIQALVSTR 81 (666)
Q Consensus 73 Wi~al~~~~ 81 (666)
|+-|++.|.
T Consensus 120 WMAAcrLAs 128 (165)
T 4bbk_A 120 WMAACILAS 128 (165)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhhhcc
Confidence 999999883
No 58
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=98.05 E-value=8.3e-06 Score=77.95 Aligned_cols=76 Identities=12% Similarity=0.051 Sum_probs=62.3
Q ss_pred cccceeeeeeeecCCCceeEEeccC---CccceeEEeeeeEEeec-CCCCccEEEEe------CCcEEEEEcCChhhHHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVG---SLAFGDLEGIISSFRES-KSDDRRFYIFT------ATKTLHLRTNSRRDRVA 72 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~---~~~~G~i~L~~a~i~~~-~~d~~~f~i~~------~~~~~~lra~~~~~r~~ 72 (666)
.-|+|-|-||+..+- |+||++|. +.|.|.|.|++|.|..+ .-...+|-|-- |...++||++++..+++
T Consensus 63 LKgyKryWFv~kd~~--LsyYKskEe~~geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~ 140 (173)
T 4f7h_A 63 LKGYKQYWCTFKDTS--ISCYKSKEESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAH 140 (173)
T ss_dssp CCCCEEEEEEEETTE--EEEESCGGGCSSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHH
T ss_pred cccceeEEEEEeCCE--EEEEcCHhHhcCCCceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHHHH
Confidence 468899999988765 99999988 58899999999999976 33344454432 45679999999999999
Q ss_pred HHHHHHHH
Q 042453 73 WIQALVST 80 (666)
Q Consensus 73 Wi~al~~~ 80 (666)
|+-|++.|
T Consensus 141 WMAAcrLA 148 (173)
T 4f7h_A 141 WMAACRLA 148 (173)
T ss_dssp HHHHHHHH
T ss_pred HHHHhhhh
Confidence 99999988
No 59
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=98.03 E-value=7e-06 Score=88.99 Aligned_cols=80 Identities=10% Similarity=0.059 Sum_probs=65.5
Q ss_pred ccceeeeeeeecCCCceeEEeccC-CccceeEEeeeeEEeecC---CCCccEEEE----eCCcEEEEEcCChhhHHHHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-SLAFGDLEGIISSFRESK---SDDRRFYIF----TATKTLHLRTNSRRDRVAWIQ 75 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-~~~~G~i~L~~a~i~~~~---~d~~~f~i~----~~~~~~~lra~~~~~r~~Wi~ 75 (666)
-.||=|-|||.-..+.|.||++++ ..|+|.|.|....+..+. ..+..|.|+ +++.+++|.|+|.+|+..||+
T Consensus 160 k~WkrRwFVL~~~~~~L~Yy~~~~~~~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~ 239 (386)
T 3lju_X 160 GQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFN 239 (386)
T ss_dssp CCEEEEEEEEETTTTEEEEEC-----CCSEEEEGGGEEEEECHHHHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHH
T ss_pred CCceEEEEEEEcCCCEEEEECCCCccCcccEEEeeccEEEEcccccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHH
Confidence 469999999988899999999886 599999999987666643 466788887 677889999999999999999
Q ss_pred HHHHHhHh
Q 042453 76 ALVSTRSL 83 (666)
Q Consensus 76 al~~~~~~ 83 (666)
||+.|+..
T Consensus 240 aIr~a~~~ 247 (386)
T 3lju_X 240 ALRAARFH 247 (386)
T ss_dssp HHHHHHHH
T ss_pred hhhhcccc
Confidence 99998543
No 60
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=98.02 E-value=5.7e-06 Score=75.07 Aligned_cols=76 Identities=24% Similarity=0.159 Sum_probs=58.8
Q ss_pred cceeeeeeeecCCCceeEEeccC----CccceeEEeeeeEE-eec----------CCCCccEEEEeC------CcEEEEE
Q 042453 5 DEKLRIFFELLTLPGSHFLSSVG----SLAFGDLEGIISSF-RES----------KSDDRRFYIFTA------TKTLHLR 63 (666)
Q Consensus 5 ~~~~~~~~~~~~~~~l~y~~~~~----~~~~G~i~L~~a~i-~~~----------~~d~~~f~i~~~------~~~~~lr 63 (666)
+|+=|.|||. -.-|.||+.++ ..|.|.|.|..+.- +.. ++-++.|.|.++ .++++|.
T Consensus 19 ~Wkkr~~vL~--~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~ 96 (117)
T 2rov_A 19 GWVKKYVIVS--SKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLL 96 (117)
T ss_dssp CCCEEEEEEE--TTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEE
T ss_pred CcEEEEEEEE--CCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEE
Confidence 7999999985 45899999764 37899999854321 111 223567999874 4899999
Q ss_pred cCChhhHHHHHHHHHHHhH
Q 042453 64 TNSRRDRVAWIQALVSTRS 82 (666)
Q Consensus 64 a~~~~~r~~Wi~al~~~~~ 82 (666)
|+|.+||++||.||+.++.
T Consensus 97 A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 97 ANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp CSSHHHHHHHHHHHHHHCT
T ss_pred eCCHHHHHHHHHHHHHHhc
Confidence 9999999999999998864
No 61
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=97.87 E-value=5.4e-05 Score=69.73 Aligned_cols=80 Identities=10% Similarity=-0.032 Sum_probs=64.5
Q ss_pred ccceeeeeeeecCCCceeEEecc----------CCccceeEEeeeeEEeecCCCC---ccEEEEeC--CcEEEEEcCChh
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSV----------GSLAFGDLEGIISSFRESKSDD---RRFYIFTA--TKTLHLRTNSRR 68 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~----------~~~~~G~i~L~~a~i~~~~~d~---~~f~i~~~--~~~~~lra~~~~ 68 (666)
-.||=|-|||. .+.|-||+.+ +..|.|.|-|.++.|. ..+|+ --|-|.+. ++.+.|+|.|.+
T Consensus 22 ksWkr~W~vL~--g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~-~~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~ 98 (126)
T 2dtc_A 22 SSWTRYWVVLS--GATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQ-LPDDPEHPDIFQLNNPDKGNVYKFQTGSRF 98 (126)
T ss_dssp CCCEEEEEEEE--TTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEE-CCCCTTSTTEEEEECTTSCSEEEEECSSHH
T ss_pred cCcccEEEEEe--CCEEEEEcccccccccccccccCCCceEEeCCCEEE-ecCCCCCCCEEEEeeCCCCCEEEEeCCCHH
Confidence 34666666654 4559999977 4588999999999997 45554 46999964 788999999999
Q ss_pred hHHHHHHHHHHHhHhCCc
Q 042453 69 DRVAWIQALVSTRSLYPL 86 (666)
Q Consensus 69 ~r~~Wi~al~~~~~~~~~ 86 (666)
+...||+||..|+...+.
T Consensus 99 ~~~~W~~ai~~a~~~~~~ 116 (126)
T 2dtc_A 99 HAILWHKHLDDACKSSRP 116 (126)
T ss_dssp HHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 999999999999987653
No 62
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=97.71 E-value=9e-05 Score=67.91 Aligned_cols=74 Identities=14% Similarity=0.158 Sum_probs=61.2
Q ss_pred cceeeeeeeecCCCceeEEecc-CCccceeEEeeeeEEeecCC----CCccEEEEeCC--------cEEEEEcCChhhHH
Q 042453 5 DEKLRIFFELLTLPGSHFLSSV-GSLAFGDLEGIISSFRESKS----DDRRFYIFTAT--------KTLHLRTNSRRDRV 71 (666)
Q Consensus 5 ~~~~~~~~~~~~~~~l~y~~~~-~~~~~G~i~L~~a~i~~~~~----d~~~f~i~~~~--------~~~~lra~~~~~r~ 71 (666)
+||-|-||| +..-|.||+.. +..++|+|-|-...|+...+ ..-+|.|+.+. +++.|-|+|.+|+.
T Consensus 29 ~wk~rWFVL--t~~~L~yyKd~~eke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~ 106 (125)
T 1dyn_A 29 GSKEYWFVL--TAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVD 106 (125)
T ss_dssp SSEEEEEEE--ESSEEEEESSTTCSCEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHH
T ss_pred CceeeEEEE--eccceeeecCCcccccceEEECCCceEeccCCCCCCCceEEEEECCCCccccccceEEEEeCCCHHHHH
Confidence 599999997 56789999855 46999999999999988543 23488988753 58999999999999
Q ss_pred HHHHHHHHH
Q 042453 72 AWIQALVST 80 (666)
Q Consensus 72 ~Wi~al~~~ 80 (666)
.||.|+..|
T Consensus 107 ~Wi~s~~ra 115 (125)
T 1dyn_A 107 SWKASFLRA 115 (125)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhC
Confidence 999999555
No 63
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=97.70 E-value=6.1e-05 Score=71.23 Aligned_cols=76 Identities=14% Similarity=0.202 Sum_probs=60.6
Q ss_pred ceeeeeeeecCCCceeEEeccCCccceeEEeeeeEEeecCCCCccEEEEeCCcEEEEEcCChhhHHHHHHHHHHHhHhC
Q 042453 6 EKLRIFFELLTLPGSHFLSSVGSLAFGDLEGIISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSLY 84 (666)
Q Consensus 6 ~~~~~~~~~~~~~~l~y~~~~~~~~~G~i~L~~a~i~~~~~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~~~~~~~ 84 (666)
||=|.|+|. ..+-|.|.++.....+|+|.|.-.--..... ++.|.|.|..+|++|.|. ...+++|++|++.++..+
T Consensus 66 ~kkR~liLT-~~PrL~Yvdp~~~~~KGeIpls~~l~ve~k~-~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~~~~ 141 (151)
T 1w1g_A 66 ARRRQLLLT-EGPHLYYVDPVNKVLKGEIPWSQELRPEAKN-FKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVWRQR 141 (151)
T ss_dssp EEEEEEEEE-TTTEEEEEETTTTEEEEEECCCTTCEEEESS-SSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEc-CCceEEEEcCccccccceEecCCCeeEEEcC-CCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHHHHH
Confidence 455666654 4556888888889999999999643333444 779999999999999997 889999999999998764
No 64
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=97.53 E-value=9.2e-05 Score=75.79 Aligned_cols=76 Identities=12% Similarity=0.035 Sum_probs=57.0
Q ss_pred ccceeeeeeeecCCCceeEEeccCC-ccceeEEe---eeeEEeecCCC--------CccEEEEeCC------cEEEEEcC
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEG---IISSFRESKSD--------DRRFYIFTAT------KTLHLRTN 65 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L---~~a~i~~~~~d--------~~~f~i~~~~------~~~~lra~ 65 (666)
-.||-|-|||. .++|.||++... .++|.|.| .++.|....+. +-.|.|.+.. .+++|.|+
T Consensus 182 k~WkkR~fvL~--~~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~ 259 (291)
T 3tca_A 182 KSWKRRYFLLR--ASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCD 259 (291)
T ss_dssp SCEEEEEEEEC--SSEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECS
T ss_pred CCceEEEEEEe--CCEEEEEecCccccccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECC
Confidence 46999999986 568999887654 77887655 55555444332 2358887643 46999999
Q ss_pred ChhhHHHHHHHHHHHh
Q 042453 66 SRRDRVAWIQALVSTR 81 (666)
Q Consensus 66 ~~~~r~~Wi~al~~~~ 81 (666)
|.+|+..||.||+.|+
T Consensus 260 s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 260 DARTLSQWVMGIRIAK 275 (291)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999999986
No 65
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=96.94 E-value=0.00056 Score=71.01 Aligned_cols=80 Identities=15% Similarity=0.051 Sum_probs=63.4
Q ss_pred ccceeeeeeeecCCCceeEEeccC-------CccceeEEeeeeEEeecCCCCc---cEEEEeC-CcEEEEEcCChhhHHH
Q 042453 4 EDEKLRIFFELLTLPGSHFLSSVG-------SLAFGDLEGIISSFRESKSDDR---RFYIFTA-TKTLHLRTNSRRDRVA 72 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~y~~~~~-------~~~~G~i~L~~a~i~~~~~d~~---~f~i~~~-~~~~~lra~~~~~r~~ 72 (666)
-.||-|-|||. ...|.||..+. ..+.|.|.|.+|.+....++++ .|.|.+. +.++.|+|.|.+|...
T Consensus 37 r~Wkk~w~VLk--g~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~ 114 (279)
T 3a8n_A 37 RKWKHYWVSLK--GCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELEN 114 (279)
T ss_dssp CCCEEEEEEEE--TTEECCBCCC--------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEETTTEEEECCCSCHHHHHH
T ss_pred CCCeEEEEEEe--CCEEEEEecccccccccccCCCceEeccCcEEEeccccCCCCcEEEEEcCCCCEEEEeCCCHHHHHH
Confidence 46887888875 56788888765 2577889999999985554433 6999875 6779999999999999
Q ss_pred HHHHHHHHhHhCC
Q 042453 73 WIQALVSTRSLYP 85 (666)
Q Consensus 73 Wi~al~~~~~~~~ 85 (666)
||+||..|...+.
T Consensus 115 WI~aI~~a~~~~~ 127 (279)
T 3a8n_A 115 WITAIHSACAAAV 127 (279)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhc
Confidence 9999999987654
No 66
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=96.93 E-value=0.0013 Score=64.25 Aligned_cols=69 Identities=14% Similarity=0.216 Sum_probs=58.1
Q ss_pred CceeEEeccCCc--------cceeEEeeeeEEeecCCCCccEEEEeC----CcEEEEEcCChhhHHHHHHHHHHHhHhCC
Q 042453 18 PGSHFLSSVGSL--------AFGDLEGIISSFRESKSDDRRFYIFTA----TKTLHLRTNSRRDRVAWIQALVSTRSLYP 85 (666)
Q Consensus 18 ~~l~y~~~~~~~--------~~G~i~L~~a~i~~~~~d~~~f~i~~~----~~~~~lra~~~~~r~~Wi~al~~~~~~~~ 85 (666)
..|.||..+|.+ ...-|.|....|+....|++-|.+.+. ..+|.|+|.|.+||..|+++++.|+..++
T Consensus 96 D~Ll~~~~~~~ky~~~~~~~~~pvi~L~~~~vre~a~d~~~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~ 175 (185)
T 2lg1_A 96 DILVFLQEKDQKYIFASLDQKSTVISLKKLIVREVAHEEKGLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTLN 175 (185)
T ss_dssp SEEECCEEETTEEECCCCSSSCSEEESSSCEEECCSSCSSEEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCEEEEEcccCCCCeEeecceEEeccCCCCCeEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhCC
Confidence 488888877653 235689999999998888888888874 46899999999999999999999999986
Q ss_pred c
Q 042453 86 L 86 (666)
Q Consensus 86 ~ 86 (666)
.
T Consensus 176 ~ 176 (185)
T 2lg1_A 176 R 176 (185)
T ss_dssp H
T ss_pred h
Confidence 3
No 67
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=96.88 E-value=0.0029 Score=58.02 Aligned_cols=78 Identities=21% Similarity=0.107 Sum_probs=53.3
Q ss_pred eeeeeeeecCCCceeEEecc---CCccceeEEeeee-EEeecC------------CCCccEEEEeCC--cEEEEEcCChh
Q 042453 7 KLRIFFELLTLPGSHFLSSV---GSLAFGDLEGIIS-SFRESK------------SDDRRFYIFTAT--KTLHLRTNSRR 68 (666)
Q Consensus 7 ~~~~~~~~~~~~~l~y~~~~---~~~~~G~i~L~~a-~i~~~~------------~d~~~f~i~~~~--~~~~lra~~~~ 68 (666)
|.|.|++..+.-.+ ||.++ .+...|.|.|.-. .|+.-. .+++-|+|..++ ++|||-|.|++
T Consensus 29 k~r~f~l~~~~~~~-w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~k~LdlvA~s~~ 107 (131)
T 1mai_A 29 RERFYKLQEDCKTI-WQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSPA 107 (131)
T ss_dssp EEEEEEECTTSSEE-EECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSCCCEEEECSSHH
T ss_pred eeEEEEECCCCCEE-EeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCCCceEEEEeCCHH
Confidence 66777766554444 44322 2346788877544 344332 256789999997 79999999999
Q ss_pred hHHHHHHHHHHHhHhCC
Q 042453 69 DRVAWIQALVSTRSLYP 85 (666)
Q Consensus 69 ~r~~Wi~al~~~~~~~~ 85 (666)
++..||.+|+.......
T Consensus 108 e~~~Wv~gL~~L~~~~~ 124 (131)
T 1mai_A 108 DAQHWVQGLRKIIHHSG 124 (131)
T ss_dssp HHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999998866544
No 68
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=96.80 E-value=0.0017 Score=70.34 Aligned_cols=81 Identities=12% Similarity=0.065 Sum_probs=57.9
Q ss_pred cccceeeeeeeecCCCceeEEeccCC-ccceeEEeeeeEE-----eec-CCCCccEEEEeCC-cEE---EEEcCChhhHH
Q 042453 3 IEDEKLRIFFELLTLPGSHFLSSVGS-LAFGDLEGIISSF-----RES-KSDDRRFYIFTAT-KTL---HLRTNSRRDRV 71 (666)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~y~~~~~~-~~~G~i~L~~a~i-----~~~-~~d~~~f~i~~~~-~~~---~lra~~~~~r~ 71 (666)
+-.||-|-|||. ..+.|.||+.+.. .+.|.|.|...++ ... ..-+.+|.|.+.. .++ .+.+++.++|.
T Consensus 19 ~k~Wk~r~fvL~-~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e 97 (446)
T 4ejn_A 19 IKTWRPRYFLLK-NDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEERE 97 (446)
T ss_dssp TTEEEEEEEEEE-TTSBEEEESSCC-------CCCGGGBCTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHH
T ss_pred cccccceEEEEe-eCCEEEEEecCCCCCccCcccccCccccceeecCCCCCCCceeEEEcCCCceeeeeEEecCCHHHHH
Confidence 446999999988 5789999998875 6679988888543 223 3336799998764 444 79999999999
Q ss_pred HHHHHHHHHhHhC
Q 042453 72 AWIQALVSTRSLY 84 (666)
Q Consensus 72 ~Wi~al~~~~~~~ 84 (666)
.|+.||+.++...
T Consensus 98 ~W~~ai~~~i~~~ 110 (446)
T 4ejn_A 98 EWTTAIQTVADGL 110 (446)
T ss_dssp HHHHHHHHHCCC-
T ss_pred HHHHHHHhhhhhh
Confidence 9999999996544
No 69
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.63 E-value=0.0064 Score=55.73 Aligned_cols=79 Identities=13% Similarity=0.016 Sum_probs=58.7
Q ss_pred cceeeeeeeec----CCCceeEEeccCC-----ccceeEEeeeeEEeecCC-------CCccEEEEeCCcEEEEEcCChh
Q 042453 5 DEKLRIFFELL----TLPGSHFLSSVGS-----LAFGDLEGIISSFRESKS-------DDRRFYIFTATKTLHLRTNSRR 68 (666)
Q Consensus 5 ~~~~~~~~~~~----~~~~l~y~~~~~~-----~~~G~i~L~~a~i~~~~~-------d~~~f~i~~~~~~~~lra~~~~ 68 (666)
.||=|-|||.- +..-|-||++++. .++..|+|+-++=+.... |...|.|.|..+++.|-|++ +
T Consensus 29 KWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~er~~~laAe~-~ 107 (127)
T 2d9w_A 29 KWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPA-A 107 (127)
T ss_dssp BCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSSCEEEEEEESSCEEEEEECH-H
T ss_pred hhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCCcceEEEEEeCCcEEEEEeCc-H
Confidence 47777777754 3445889998774 567779998775433322 33789999999999999996 5
Q ss_pred hHHHHHHHHHHHhHhCCc
Q 042453 69 DRVAWIQALVSTRSLYPL 86 (666)
Q Consensus 69 ~r~~Wi~al~~~~~~~~~ 86 (666)
|+..||.+|... .||.
T Consensus 108 E~~~Wi~~ic~~--aF~~ 123 (127)
T 2d9w_A 108 ERGDWVQAICLL--AFSG 123 (127)
T ss_dssp HHHHHHHHHHHH--HTSS
T ss_pred HHHHHHHHHHHH--hcCC
Confidence 999999999765 3664
No 70
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=96.25 E-value=0.011 Score=55.76 Aligned_cols=52 Identities=15% Similarity=0.274 Sum_probs=44.1
Q ss_pred ceeEEeeeeEEeecCC--CCc--cEEEEeCCc---EEEEEcCChhhHHHHHHHHHHHhH
Q 042453 31 FGDLEGIISSFRESKS--DDR--RFYIFTATK---TLHLRTNSRRDRVAWIQALVSTRS 82 (666)
Q Consensus 31 ~G~i~L~~a~i~~~~~--d~~--~f~i~~~~~---~~~lra~~~~~r~~Wi~al~~~~~ 82 (666)
+|+|-|.+|.|....+ .++ .|.|.+.+- +|.|-|+|.+|-..||+||+.|..
T Consensus 90 kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 90 RGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp CEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 7999999999988764 234 677877755 799999999999999999999864
No 71
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=96.10 E-value=0.022 Score=53.18 Aligned_cols=79 Identities=6% Similarity=-0.123 Sum_probs=58.0
Q ss_pred cceeeeeeeecCCCceeEEeccC-------CccceeEEeeeeEEeecC--CCCccEEEEeCC------cEEEEEcCChhh
Q 042453 5 DEKLRIFFELLTLPGSHFLSSVG-------SLAFGDLEGIISSFRESK--SDDRRFYIFTAT------KTLHLRTNSRRD 69 (666)
Q Consensus 5 ~~~~~~~~~~~~~~~l~y~~~~~-------~~~~G~i~L~~a~i~~~~--~d~~~f~i~~~~------~~~~lra~~~~~ 69 (666)
|-+-|-||| -++.|.|++... -+-++.+.|-+-.|.... -=+..|+|..+. .+++|.|.+..|
T Consensus 32 g~qqR~~FL--FND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~e~~p~~~~l~s~~~G~~~k~~i~~~A~s~~E 109 (140)
T 3qwm_A 32 GLHQREIFL--FNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSSVPGADIKVLINFNAPNPQD 109 (140)
T ss_dssp TTTEEEEEE--ESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECCSSCTTEEEEEECCTTSCCEEEEEEECSSHHH
T ss_pred cccceEEEE--ecchhhheeecccCCCCCceEEEEEeeecceEEEcccCCCCceEEEEEecCCCCcceEEEEEECCCHHH
Confidence 456688887 578899986222 255566666666554443 357788888753 559999999999
Q ss_pred HHHHHHHHHHHhHhCC
Q 042453 70 RVAWIQALVSTRSLYP 85 (666)
Q Consensus 70 r~~Wi~al~~~~~~~~ 85 (666)
|.+||++|+.++....
T Consensus 110 R~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 110 RKKFTDDLRESIAEVQ 125 (140)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987754
No 72
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=95.91 E-value=0.021 Score=59.26 Aligned_cols=75 Identities=17% Similarity=0.229 Sum_probs=55.5
Q ss_pred eeeeeeeecCCCceeEEeccCC-------ccceeEEeeeeEEeec-CCCCccEEEEeC-----CcEEEEEcCChhhHHHH
Q 042453 7 KLRIFFELLTLPGSHFLSSVGS-------LAFGDLEGIISSFRES-KSDDRRFYIFTA-----TKTLHLRTNSRRDRVAW 73 (666)
Q Consensus 7 ~~~~~~~~~~~~~l~y~~~~~~-------~~~G~i~L~~a~i~~~-~~d~~~f~i~~~-----~~~~~lra~~~~~r~~W 73 (666)
+-|.+||-. ..|.||+.+.. .-+|.|.|....|..+ +.|++.|.|.++ ..++.|+|.|.++|.+|
T Consensus 222 ~~r~~fLF~--d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W 299 (311)
T 1nty_A 222 RERHLFLFE--MSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDW 299 (311)
T ss_dssp EEEEEEEES--SEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCCTTCTTEEEEEESSSCCTTTCEEEECSSHHHHHHH
T ss_pred ceeEEEecc--CeEEEEEeeccCCCCceeEEeeeeeccceeeEEccCCCCceEEEEeCCCCCCCceEEEECCCHHHHHHH
Confidence 445444433 57889886532 2356677777777653 567889999883 46799999999999999
Q ss_pred HHHHHHHhHh
Q 042453 74 IQALVSTRSL 83 (666)
Q Consensus 74 i~al~~~~~~ 83 (666)
+++|+.|+..
T Consensus 300 ~~~i~~~i~e 309 (311)
T 1nty_A 300 IKHIREVIQE 309 (311)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999765
No 73
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=95.89 E-value=0.023 Score=61.26 Aligned_cols=75 Identities=16% Similarity=0.126 Sum_probs=59.5
Q ss_pred eeeeeecCCCceeEEeccCCc-------------------cceeEEeeeeEEeecCCCCccEEEEeCC-----cEEEEEc
Q 042453 9 RIFFELLTLPGSHFLSSVGSL-------------------AFGDLEGIISSFRESKSDDRRFYIFTAT-----KTLHLRT 64 (666)
Q Consensus 9 ~~~~~~~~~~~l~y~~~~~~~-------------------~~G~i~L~~a~i~~~~~d~~~f~i~~~~-----~~~~lra 64 (666)
|.+||. .+.|.||+.+++. -++.|.|....|+....|++.|.|.+.. .++.|+|
T Consensus 313 ~~~fLF--~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~~~~f~l~~~~~~~~~~~~~l~A 390 (418)
T 3t06_A 313 LHVLLL--EDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVA 390 (418)
T ss_dssp EEEEEE--SSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSSCSSEEEEEECCSSSTTCEEEEEC
T ss_pred EEEEec--CCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceeccccccCceEEEEecCCCCCceEEEEEc
Confidence 444433 4678888866531 1368999999999888999999998853 7899999
Q ss_pred CChhhHHHHHHHHHHHhHhCC
Q 042453 65 NSRRDRVAWIQALVSTRSLYP 85 (666)
Q Consensus 65 ~~~~~r~~Wi~al~~~~~~~~ 85 (666)
.|.++|..||++|+.|+.-.+
T Consensus 391 ~s~~ek~~W~~~I~~a~~~~~ 411 (418)
T 3t06_A 391 LTSSDKNTWMELLEEAVRNAH 411 (418)
T ss_dssp SSHHHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHHHhcCc
Confidence 999999999999999987754
No 74
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=95.89 E-value=0.024 Score=59.99 Aligned_cols=66 Identities=17% Similarity=0.172 Sum_probs=53.8
Q ss_pred CceeEEeccCCc-------------------cceeEEeeeeEEeecCCCCccEEEEeC-----CcEEEEEcCChhhHHHH
Q 042453 18 PGSHFLSSVGSL-------------------AFGDLEGIISSFRESKSDDRRFYIFTA-----TKTLHLRTNSRRDRVAW 73 (666)
Q Consensus 18 ~~l~y~~~~~~~-------------------~~G~i~L~~a~i~~~~~d~~~f~i~~~-----~~~~~lra~~~~~r~~W 73 (666)
+.|.|++.++++ -++.|.|....|.....|++.|.|.+. .+++.|+|.|.++|..|
T Consensus 278 d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W 357 (368)
T 1xcg_A 278 DLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTW 357 (368)
T ss_dssp SEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHH
T ss_pred ccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeecccCCCceEEEEEecCCCCceEEEEEcCCHHHHHHH
Confidence 578888876431 157789988888887788889988764 37899999999999999
Q ss_pred HHHHHHHhHh
Q 042453 74 IQALVSTRSL 83 (666)
Q Consensus 74 i~al~~~~~~ 83 (666)
+++|+.|++.
T Consensus 358 ~~~i~~ai~~ 367 (368)
T 1xcg_A 358 MELLEEAVRN 367 (368)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999865
No 75
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=95.80 E-value=0.013 Score=54.18 Aligned_cols=77 Identities=18% Similarity=0.176 Sum_probs=60.8
Q ss_pred eeeeeeeecCCCceeEEeccC----CccceeEEeeeeEEeec---CCCCccEEEEeCC-cEEEEEcCChhhHHHHHHHHH
Q 042453 7 KLRIFFELLTLPGSHFLSSVG----SLAFGDLEGIISSFRES---KSDDRRFYIFTAT-KTLHLRTNSRRDRVAWIQALV 78 (666)
Q Consensus 7 ~~~~~~~~~~~~~l~y~~~~~----~~~~G~i~L~~a~i~~~---~~d~~~f~i~~~~-~~~~lra~~~~~r~~Wi~al~ 78 (666)
+=|.|||- ...|.|++... -.-+|.+-|++..|... ++.+..|.|+-.. +++-+-|.|.+|+++||++|+
T Consensus 45 ~eR~l~LF--~~~Ll~~s~~~~~~~f~~kgklPL~g~~V~~~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~ 122 (132)
T 1v61_A 45 EERYFLLF--SSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLN 122 (132)
T ss_dssp CEEEEEEC--SSCEEEEECSSSSSCCEEEEEECTTTCBCSTTCSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHH
T ss_pred eEEEEEEc--CCeEEEEEecCCCceEEEEEEEecceeEEEeccccccCccEEEEecCCCceEEEEeCCHHHHHHHHHHHH
Confidence 44766653 46788888532 35569999998888753 2235699999876 899999999999999999999
Q ss_pred HHhHhCC
Q 042453 79 STRSLYP 85 (666)
Q Consensus 79 ~~~~~~~ 85 (666)
.++...|
T Consensus 123 ~~i~~~~ 129 (132)
T 1v61_A 123 RLTKSGP 129 (132)
T ss_dssp HHHTTSC
T ss_pred HHHhhcc
Confidence 9999887
No 76
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=95.73 E-value=0.015 Score=62.01 Aligned_cols=71 Identities=7% Similarity=0.114 Sum_probs=53.9
Q ss_pred CCceeEEeccCCc-------------------cceeEEeeeeEEeecCCCCccEEEEe----CCcEEEEEcCChhhHHHH
Q 042453 17 LPGSHFLSSVGSL-------------------AFGDLEGIISSFRESKSDDRRFYIFT----ATKTLHLRTNSRRDRVAW 73 (666)
Q Consensus 17 ~~~l~y~~~~~~~-------------------~~G~i~L~~a~i~~~~~d~~~f~i~~----~~~~~~lra~~~~~r~~W 73 (666)
.+.|.|++.+++. -+|.|.|....|.....|++.|.+.+ +..++.|+|.|.++|..|
T Consensus 281 ~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W 360 (385)
T 1txd_A 281 EDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVW 360 (385)
T ss_dssp SSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC-CCEEEEEEECSSCEEEEEEECSSHHHHHHH
T ss_pred CCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceecccccccccccCCceEEEEEEcCCCceEEEEEcCCHHHHHHH
Confidence 4578888876532 25789998888887766766655444 356799999999999999
Q ss_pred HHHHHHHhHhCCcc
Q 042453 74 IQALVSTRSLYPLR 87 (666)
Q Consensus 74 i~al~~~~~~~~~~ 87 (666)
+++|+.|+..+...
T Consensus 361 ~~~i~~~i~~~~~~ 374 (385)
T 1txd_A 361 QDLICRMAASVKEQ 374 (385)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCC
Confidence 99999999988643
No 77
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=95.58 E-value=0.045 Score=57.98 Aligned_cols=77 Identities=16% Similarity=0.125 Sum_probs=60.2
Q ss_pred eeeeeeeecCCCceeEEeccCCc-------------------cceeEEeeeeEEeecCCCCccEEEEeC----CcEEEEE
Q 042453 7 KLRIFFELLTLPGSHFLSSVGSL-------------------AFGDLEGIISSFRESKSDDRRFYIFTA----TKTLHLR 63 (666)
Q Consensus 7 ~~~~~~~~~~~~~l~y~~~~~~~-------------------~~G~i~L~~a~i~~~~~d~~~f~i~~~----~~~~~lr 63 (666)
+-|.|||. .+.|.||+.+++. ..+.|.|....++.+..|++.|.+... ..++.|.
T Consensus 275 ~~~~~fLF--~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~~~~~~~~i~~~~~~~~~~~l~ 352 (377)
T 3p6a_A 275 VEVHVLLL--DDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHKAFYVLFTWDQEAQIYELV 352 (377)
T ss_dssp EEEEEEEE--SSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEEECTTCTTEEEEEETTCTTCCEEEEE
T ss_pred EEEEEEee--CCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhccccccccceeEEEecCCCCCeeEEEe
Confidence 34555543 5678999877531 134799999999998888888776664 4679999
Q ss_pred cCChhhHHHHHHHHHHHhHhCC
Q 042453 64 TNSRRDRVAWIQALVSTRSLYP 85 (666)
Q Consensus 64 a~~~~~r~~Wi~al~~~~~~~~ 85 (666)
|.|.+||..|+++|+.|++.+.
T Consensus 353 A~s~~ek~~W~~~I~~ai~~~k 374 (377)
T 3p6a_A 353 AQTVSERKNWCALITETAGSLK 374 (377)
T ss_dssp CSSHHHHHHHHHHHHHHHHTCC
T ss_pred cCCHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999998875
No 78
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=95.28 E-value=0.084 Score=47.25 Aligned_cols=67 Identities=6% Similarity=0.009 Sum_probs=48.9
Q ss_pred CCceeEEeccCC-----ccceeEEeeeeEE---eecCCCCccEEEEeCCcEEEEEcCChhhHHHHHHHHHHHhHh
Q 042453 17 LPGSHFLSSVGS-----LAFGDLEGIISSF---RESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSL 83 (666)
Q Consensus 17 ~~~l~y~~~~~~-----~~~G~i~L~~a~i---~~~~~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~~~~~~ 83 (666)
++.|.|+..... .-..|+.|..-.+ .-++.-...|.|.++.+++-++|++.+||.+||.+|+.|+..
T Consensus 34 ND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 34 NDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp SSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBTTBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeccCcccEEEEEEEEcccCEEEECCCCcccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 448999887543 2224555543333 222334678999999999999999999999999999999754
No 79
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=95.27 E-value=0.042 Score=58.20 Aligned_cols=68 Identities=13% Similarity=0.144 Sum_probs=52.1
Q ss_pred CCceeEEeccCC----------ccceeEEeeeeEEeec-CCCCccEEEEeC-----CcEEEEEcCChhhHHHHHHHHHHH
Q 042453 17 LPGSHFLSSVGS----------LAFGDLEGIISSFRES-KSDDRRFYIFTA-----TKTLHLRTNSRRDRVAWIQALVST 80 (666)
Q Consensus 17 ~~~l~y~~~~~~----------~~~G~i~L~~a~i~~~-~~d~~~f~i~~~-----~~~~~lra~~~~~r~~Wi~al~~~ 80 (666)
...|.|++.+.+ .-++.|.|....|..+ +.|++.|.|... ..++.|+|.|.++|.+|+++|..|
T Consensus 237 ~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~a 316 (354)
T 2rgn_B 237 EQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQI 316 (354)
T ss_dssp SSEEEEEEECC--------CCEEEEEEEEGGGEEEEESGGGCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeeccCCCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHH
Confidence 457889886642 1235577777666654 467899999872 478999999999999999999999
Q ss_pred hHhC
Q 042453 81 RSLY 84 (666)
Q Consensus 81 ~~~~ 84 (666)
+..+
T Consensus 317 i~~~ 320 (354)
T 2rgn_B 317 LESQ 320 (354)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 80
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=95.25 E-value=0.035 Score=60.12 Aligned_cols=76 Identities=14% Similarity=0.030 Sum_probs=51.3
Q ss_pred eeeeeeeecCCCceeEEeccCC---ccceeEEeeeeEEeecCC--CCccEEEEeCCcEEEEEcCChhhHHHHHHHHHHHh
Q 042453 7 KLRIFFELLTLPGSHFLSSVGS---LAFGDLEGIISSFRESKS--DDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTR 81 (666)
Q Consensus 7 ~~~~~~~~~~~~~l~y~~~~~~---~~~G~i~L~~a~i~~~~~--d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~~~~ 81 (666)
+-|.+||. .+.|.|++.+.+ ..++.|.|....|..... .+..|.|.+..+++.|+|.|.++|.+|+++|+.|+
T Consensus 259 ~~r~~fLF--~d~Ll~~k~~~~~~y~~k~~i~L~~l~v~~~~~~~~~~~f~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai 336 (434)
T 3mpx_A 259 RPRHLFLM--NDVLLYTYPQKDGKYRLKNTLAVANMKVSRPVMEKVPYALKIETSESCLMLSASSCAERDEWYGCLSRAL 336 (434)
T ss_dssp EEEEEEEE--SSEEEEEEECTTSCEEEEEEEEC-----CCCCCTTSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHC-
T ss_pred eEEEEEEE--CCEEEEEEecCCCeEEEEEEEEcCCcEEEecCCCCCCeeEEEecCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 34444443 358999986543 445778888777754333 36789998889999999999999999999999998
Q ss_pred HhC
Q 042453 82 SLY 84 (666)
Q Consensus 82 ~~~ 84 (666)
...
T Consensus 337 ~e~ 339 (434)
T 3mpx_A 337 PED 339 (434)
T ss_dssp ---
T ss_pred HHH
Confidence 764
No 81
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=95.15 E-value=0.059 Score=60.52 Aligned_cols=77 Identities=16% Similarity=0.125 Sum_probs=60.6
Q ss_pred eeeeeeeecCCCceeEEeccCCc-------------------cceeEEeeeeEEeecCCCCccEEEEeC----CcEEEEE
Q 042453 7 KLRIFFELLTLPGSHFLSSVGSL-------------------AFGDLEGIISSFRESKSDDRRFYIFTA----TKTLHLR 63 (666)
Q Consensus 7 ~~~~~~~~~~~~~l~y~~~~~~~-------------------~~G~i~L~~a~i~~~~~d~~~f~i~~~----~~~~~lr 63 (666)
+-|.|||. .+.|.||+.+++. ..+.|.|....|+....|++.|.|... ..++.|.
T Consensus 428 ~~r~~fLF--~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~d~~~ffli~~~~~~~~~~~L~ 505 (536)
T 3odw_A 428 VEVHVLLL--DDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHKAFYVLFTWDQEAQIYELV 505 (536)
T ss_dssp CEEEEEEE--SSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEECTTCTTEEEEEEC---CCCEEEEE
T ss_pred eEEEEEEc--CCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeecccccCCceEEEecCCCCceEEEEE
Confidence 34555543 5678888866531 134588988999999889988888663 5789999
Q ss_pred cCChhhHHHHHHHHHHHhHhCC
Q 042453 64 TNSRRDRVAWIQALVSTRSLYP 85 (666)
Q Consensus 64 a~~~~~r~~Wi~al~~~~~~~~ 85 (666)
|.|++||..|+++|+.|++.+.
T Consensus 506 A~S~eEK~~W~~~I~~aI~~~~ 527 (536)
T 3odw_A 506 AQTVSERKNWCALITETAGSLK 527 (536)
T ss_dssp CSSHHHHHHHHHHHHHHHHTSC
T ss_pred CCCHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999875
No 82
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=94.92 E-value=0.063 Score=56.48 Aligned_cols=76 Identities=13% Similarity=0.072 Sum_probs=56.9
Q ss_pred eeeeeeeecCCCceeEEeccCC------------ccceeEEeeeeEEeecCC---CCccEEEEeCC-cEEEEEcCChhhH
Q 042453 7 KLRIFFELLTLPGSHFLSSVGS------------LAFGDLEGIISSFRESKS---DDRRFYIFTAT-KTLHLRTNSRRDR 70 (666)
Q Consensus 7 ~~~~~~~~~~~~~l~y~~~~~~------------~~~G~i~L~~a~i~~~~~---d~~~f~i~~~~-~~~~lra~~~~~r 70 (666)
+-|.+||. ...|.||+.+.. .-++.|.|....|..... ....|.|...+ +++.|+|.|.++|
T Consensus 260 ~~~~~fLF--~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~~l~a~s~~ek 337 (354)
T 1dbh_A 260 HERHIFLF--DGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEK 337 (354)
T ss_dssp SCEEEEEE--SSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSSSCCSEEEECCTTSCCEEEECSSHHHH
T ss_pred ceEEEEEe--CCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCcccccCccEEEecCCCCEEEEEeCCHHHH
Confidence 34545444 568999987631 234778888877766432 25789998875 8899999999999
Q ss_pred HHHHHHHHHHhHhC
Q 042453 71 VAWIQALVSTRSLY 84 (666)
Q Consensus 71 ~~Wi~al~~~~~~~ 84 (666)
.+|+++|+.++.+.
T Consensus 338 ~~W~~~i~~~~~~~ 351 (354)
T 1dbh_A 338 NNWMAALISLQYRS 351 (354)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999997653
No 83
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=94.71 E-value=0.071 Score=57.29 Aligned_cols=77 Identities=14% Similarity=0.098 Sum_probs=55.3
Q ss_pred eeeeeeeecCCCceeEEeccCC--ccceeEEeeeeEEeecCCC-------CccEEEEe--CCcEEEEEcCChhhHHHHHH
Q 042453 7 KLRIFFELLTLPGSHFLSSVGS--LAFGDLEGIISSFRESKSD-------DRRFYIFT--ATKTLHLRTNSRRDRVAWIQ 75 (666)
Q Consensus 7 ~~~~~~~~~~~~~l~y~~~~~~--~~~G~i~L~~a~i~~~~~d-------~~~f~i~~--~~~~~~lra~~~~~r~~Wi~ 75 (666)
+-|.+||. ...|.|++.++. .-++.|.|....|...... ...|.|.. +.+.+.|.|.|.++|..|++
T Consensus 251 ~~~~~fLF--~d~Ll~~k~k~~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~ 328 (406)
T 2vrw_B 251 TDRYAFLL--DKALLICKRRGDSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWME 328 (406)
T ss_dssp EEEEEEEE--SSEEEEEEEETTEEEEEEEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHH
T ss_pred ceEEEEec--CCEEEEEEecCCceEEEEEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHHHHHHHH
Confidence 33444433 457999988765 3456788877777655433 26799987 46789999999999999999
Q ss_pred HHHHHhHhCC
Q 042453 76 ALVSTRSLYP 85 (666)
Q Consensus 76 al~~~~~~~~ 85 (666)
+|+.|+....
T Consensus 329 ~i~~ai~~~~ 338 (406)
T 2vrw_B 329 QFEMAISNIY 338 (406)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHhhhh
Confidence 9999987654
No 84
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=94.47 E-value=0.065 Score=54.86 Aligned_cols=76 Identities=14% Similarity=0.034 Sum_probs=55.9
Q ss_pred cceeeeeeeecCCCceeEEeccCC--cccee---EEeeeeEEeecCCC--------CccEEEEeCCc------EEEEEcC
Q 042453 5 DEKLRIFFELLTLPGSHFLSSVGS--LAFGD---LEGIISSFRESKSD--------DRRFYIFTATK------TLHLRTN 65 (666)
Q Consensus 5 ~~~~~~~~~~~~~~~l~y~~~~~~--~~~G~---i~L~~a~i~~~~~d--------~~~f~i~~~~~------~~~lra~ 65 (666)
.||=|-|+|+ ..+| ||.+++. .+++. ++|....|...... +-.|.|-.... .++|-|+
T Consensus 147 ~WkkRyfvLr--~sgL-y~~~k~~sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcae 223 (256)
T 3hk0_A 147 SWKKLYVCLR--RSGL-YCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAE 223 (256)
T ss_dssp CEEEEEEEEE--TTEE-EEESSTTCCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEES
T ss_pred cceEEEEEEe--CCEE-EEEecCCCCccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeC
Confidence 5899999998 5677 4444553 45554 69999999776532 22467665433 4999999
Q ss_pred ChhhHHHHHHHHHHHhHh
Q 042453 66 SRRDRVAWIQALVSTRSL 83 (666)
Q Consensus 66 ~~~~r~~Wi~al~~~~~~ 83 (666)
|+++|.+||.|++.||--
T Consensus 224 de~~~~~W~~aIr~ak~g 241 (256)
T 3hk0_A 224 DEQTRTSWMTAFRLLKYG 241 (256)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 999999999999999643
No 85
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=94.23 E-value=0.12 Score=54.49 Aligned_cols=76 Identities=16% Similarity=0.187 Sum_probs=54.3
Q ss_pred eeeeeeecCCCceeEEeccCC-----------ccceeEEeeeeEEeec-CCCCccEEEEeC--CcEEEEEcCChhhHHHH
Q 042453 8 LRIFFELLTLPGSHFLSSVGS-----------LAFGDLEGIISSFRES-KSDDRRFYIFTA--TKTLHLRTNSRRDRVAW 73 (666)
Q Consensus 8 ~~~~~~~~~~~~l~y~~~~~~-----------~~~G~i~L~~a~i~~~-~~d~~~f~i~~~--~~~~~lra~~~~~r~~W 73 (666)
-|.+||. ...|.||+.+.. .-++.|.|....|..+ +.|++.|.|... ..++.|+|.|.++|.+|
T Consensus 239 ~r~~fLF--~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W 316 (353)
T 1kz7_A 239 QRHLFLH--EKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVKGDTKKFEIWYNAREEVYIIQAPTPEIKAAW 316 (353)
T ss_dssp EEEEEEE--SSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBTTBTTEEEEEETTTTEEEEEECSSHHHHHHH
T ss_pred eeEEEEE--CCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCCCCCceEEEEECCCCcEEEEECCCHHHHHHH
Confidence 3444433 457889987631 1235566666666544 457899999874 56799999999999999
Q ss_pred HHHHHHHhHhCC
Q 042453 74 IQALVSTRSLYP 85 (666)
Q Consensus 74 i~al~~~~~~~~ 85 (666)
+++|+.|+..+-
T Consensus 317 ~~~i~~ai~~~~ 328 (353)
T 1kz7_A 317 VNAIRKVLTSQL 328 (353)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999876643
No 86
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=94.09 E-value=0.038 Score=55.12 Aligned_cols=52 Identities=27% Similarity=0.424 Sum_probs=40.7
Q ss_pred cceeEEeee-eEEeec--CCCCccEEEEeCCcEEEEEcCChhhHHHHHHHHHHHh
Q 042453 30 AFGDLEGII-SSFRES--KSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTR 81 (666)
Q Consensus 30 ~~G~i~L~~-a~i~~~--~~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~~~~ 81 (666)
..|.+++.. .++..+ ...+..|.|.|..++|||.|++.+|++.||.|||.++
T Consensus 174 ~~g~~~~~~i~s~~~~~~~~~~~~f~iit~~r~~~~~a~s~~e~~~Wi~~lq~~~ 228 (228)
T 3tfm_A 174 AVGTLDVGLIDSVCASDSPDRPNSFVIITANRVLHCNADTPEEMHHWITLLQRSK 228 (228)
T ss_dssp CSEEEEGGGEEEEEECCCSSCTTEEEEEETTEEEEEECSSHHHHHHHHHHHCSCC
T ss_pred ccccCChhheeccccCCCCCCCCcEEEEeCCceEEEEcCCHHHHHHHHHHHhhcC
Confidence 457777654 233333 3467789999999999999999999999999998753
No 87
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=93.95 E-value=0.11 Score=57.02 Aligned_cols=77 Identities=14% Similarity=0.151 Sum_probs=55.8
Q ss_pred eeeeeeeecCCCceeEEeccCC-----ccceeEEeeeeEEeecCCC---------CccEEEEeC--CcEEEEEcCChhhH
Q 042453 7 KLRIFFELLTLPGSHFLSSVGS-----LAFGDLEGIISSFRESKSD---------DRRFYIFTA--TKTLHLRTNSRRDR 70 (666)
Q Consensus 7 ~~~~~~~~~~~~~l~y~~~~~~-----~~~G~i~L~~a~i~~~~~d---------~~~f~i~~~--~~~~~lra~~~~~r 70 (666)
+-|.|||. ...|.||+.+.. .-+|.|.|....|...... ...|.|... .+++.|.|.|.++|
T Consensus 351 ~~r~~fLF--~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK 428 (466)
T 2pz1_A 351 QQRMFFLF--DHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQK 428 (466)
T ss_dssp EEEEEEEE--TTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHH
T ss_pred eEEEEEEE--CCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHHHH
Confidence 34544443 457899986532 2357788887777654322 146888875 56899999999999
Q ss_pred HHHHHHHHHHhHhCC
Q 042453 71 VAWIQALVSTRSLYP 85 (666)
Q Consensus 71 ~~Wi~al~~~~~~~~ 85 (666)
..|+++|+.++.+..
T Consensus 429 ~~W~~~i~~a~~~~~ 443 (466)
T 2pz1_A 429 QRWLKAFAREREQVQ 443 (466)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998765
No 88
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=93.46 E-value=0.14 Score=55.01 Aligned_cols=78 Identities=10% Similarity=0.149 Sum_probs=56.1
Q ss_pred eeeeeeeecCCCceeEEeccCC-----ccceeEEeeeeEEeecCC-C--------CccEEEEeC--CcEEEEEcCChhhH
Q 042453 7 KLRIFFELLTLPGSHFLSSVGS-----LAFGDLEGIISSFRESKS-D--------DRRFYIFTA--TKTLHLRTNSRRDR 70 (666)
Q Consensus 7 ~~~~~~~~~~~~~l~y~~~~~~-----~~~G~i~L~~a~i~~~~~-d--------~~~f~i~~~--~~~~~lra~~~~~r 70 (666)
+-|.|||. ...|.||+.+.. .-+|.|.|....|..... + ...|.|... .+++.|.|.|.++|
T Consensus 274 ~~r~~fLF--~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK 351 (402)
T 2dfk_A 274 QQRVFFLF--DHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEK 351 (402)
T ss_dssp EEEEEEEE--TTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHH
T ss_pred EEEEEEee--CCEEEEEEeccccCCceEEeeeeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCHHHH
Confidence 34444443 457889986531 335778888777765432 2 257998875 56899999999999
Q ss_pred HHHHHHHHHHhHhCCc
Q 042453 71 VAWIQALVSTRSLYPL 86 (666)
Q Consensus 71 ~~Wi~al~~~~~~~~~ 86 (666)
..|+++|+.++.+...
T Consensus 352 ~~Wi~~i~~a~~~~~~ 367 (402)
T 2dfk_A 352 IRWLRAFREERKMVQE 367 (402)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999888653
No 89
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=92.62 E-value=0.2 Score=56.76 Aligned_cols=77 Identities=13% Similarity=0.039 Sum_probs=57.3
Q ss_pred eeeeeeeecCCCceeEEeccCC--ccceeEEeeeeEEeecCCC-------CccEEEEeCC--cEEEEEcCChhhHHHHHH
Q 042453 7 KLRIFFELLTLPGSHFLSSVGS--LAFGDLEGIISSFRESKSD-------DRRFYIFTAT--KTLHLRTNSRRDRVAWIQ 75 (666)
Q Consensus 7 ~~~~~~~~~~~~~l~y~~~~~~--~~~G~i~L~~a~i~~~~~d-------~~~f~i~~~~--~~~~lra~~~~~r~~Wi~ 75 (666)
+-|.+|| -...|.|++.++. .-++.|.|....|...... +..|.|...+ +++.|.|.|.+||..|++
T Consensus 423 ~~r~~fL--F~d~Ll~~k~~~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~ 500 (587)
T 3ky9_A 423 MDRYAFL--LDKALLICKRRGDSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWME 500 (587)
T ss_dssp EEEEEEE--ETTEEEEEEEETTEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHH
T ss_pred ceEEEEE--ECCEEEEEEecCCEEEeeeeechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHHHHHHHH
Confidence 3454443 3578999998865 5567888888888776433 2579999865 789999999999999999
Q ss_pred HHHHHhHhCC
Q 042453 76 ALVSTRSLYP 85 (666)
Q Consensus 76 al~~~~~~~~ 85 (666)
+|+.|+..+.
T Consensus 501 ~I~~ai~~~~ 510 (587)
T 3ky9_A 501 QFEMAISNIY 510 (587)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHhhhhc
Confidence 9999998765
No 90
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=92.54 E-value=0.18 Score=52.31 Aligned_cols=77 Identities=12% Similarity=0.027 Sum_probs=51.5
Q ss_pred cceeeeeeeecCCCceeEEeccCC-ccc---eeEEeeeeEEeecCCC--------CccEEEEeCC------cEEEEEcCC
Q 042453 5 DEKLRIFFELLTLPGSHFLSSVGS-LAF---GDLEGIISSFRESKSD--------DRRFYIFTAT------KTLHLRTNS 66 (666)
Q Consensus 5 ~~~~~~~~~~~~~~~l~y~~~~~~-~~~---G~i~L~~a~i~~~~~d--------~~~f~i~~~~------~~~~lra~~ 66 (666)
.||=|-|||+ .++|-|++...+ .++ |-++|....|....+. +-.|.|-... .+.+|=|+|
T Consensus 173 ~WkkRyfvLr--~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caed 250 (281)
T 4gmv_A 173 SWKKRYFLLR--ASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDD 250 (281)
T ss_dssp CEEEEEEEEC--SSCEEEC---------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSS
T ss_pred CCeEEEEEEe--CCEEEEEeCCCCCccccceEEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCC
Confidence 5888888888 456644443222 344 3358998888775421 3467787532 369999999
Q ss_pred hhhHHHHHHHHHHHhHh
Q 042453 67 RRDRVAWIQALVSTRSL 83 (666)
Q Consensus 67 ~~~r~~Wi~al~~~~~~ 83 (666)
.++|.+||.||..|+--
T Consensus 251 e~~~~~Wv~Air~ak~g 267 (281)
T 4gmv_A 251 VRTLHQWVNGIRIAKYG 267 (281)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 99999999999999643
No 91
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=92.16 E-value=0.027 Score=62.07 Aligned_cols=55 Identities=22% Similarity=0.264 Sum_probs=0.0
Q ss_pred ceeEEeeeeEEeec---CCCCccEEEEeCCcEEEEEcCChhhHHHHHHHHHHHhHhCC
Q 042453 31 FGDLEGIISSFRES---KSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSLYP 85 (666)
Q Consensus 31 ~G~i~L~~a~i~~~---~~d~~~f~i~~~~~~~~lra~~~~~r~~Wi~al~~~~~~~~ 85 (666)
++.|-|....|... .+++..|.|....+++.|+|.|.++|..|+++|+.|+..+.
T Consensus 308 k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 365 (510)
T 3jzy_A 308 KTPIFLNEVLVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYI 365 (510)
T ss_dssp ----------------------------------------------------------
T ss_pred cCceehhheEEeccCCCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 45566666666653 35678999999999999999999999999999999987764
No 92
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=91.96 E-value=0.23 Score=51.97 Aligned_cols=66 Identities=9% Similarity=0.108 Sum_probs=49.4
Q ss_pred CCceeEEecc--CCc-----cceeEEeeeeEEeecCCC------------------CccEEEEe----CCcEEEEEcCCh
Q 042453 17 LPGSHFLSSV--GSL-----AFGDLEGIISSFRESKSD------------------DRRFYIFT----ATKTLHLRTNSR 67 (666)
Q Consensus 17 ~~~l~y~~~~--~~~-----~~G~i~L~~a~i~~~~~d------------------~~~f~i~~----~~~~~~lra~~~ 67 (666)
...|.|++.+ ++. -++.|.|....|....+. ...|.|.. ..+++.|+|.|.
T Consensus 252 ~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~~~~~~~~l~a~s~ 331 (346)
T 2z0q_A 252 QEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQTHSLQANDT 331 (346)
T ss_dssp SSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCEEEEEECSSH
T ss_pred CCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecCCCCceEEEEECCH
Confidence 4678888864 222 256788887777665433 24699975 367899999999
Q ss_pred hhHHHHHHHHHHHhH
Q 042453 68 RDRVAWIQALVSTRS 82 (666)
Q Consensus 68 ~~r~~Wi~al~~~~~ 82 (666)
++|..|+++|+.|++
T Consensus 332 ~ek~~W~~~i~~aie 346 (346)
T 2z0q_A 332 FNKQQWLNCIRQAKE 346 (346)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999999874
No 93
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=88.95 E-value=0.46 Score=50.34 Aligned_cols=56 Identities=16% Similarity=0.069 Sum_probs=41.6
Q ss_pred ceeEEeeeeEEeecCCCC----ccEEEEe--------CCcEEEEEcCChhhHHHHHHHHHHHhHhCCc
Q 042453 31 FGDLEGIISSFRESKSDD----RRFYIFT--------ATKTLHLRTNSRRDRVAWIQALVSTRSLYPL 86 (666)
Q Consensus 31 ~G~i~L~~a~i~~~~~d~----~~f~i~~--------~~~~~~lra~~~~~r~~Wi~al~~~~~~~~~ 86 (666)
++.|.|....|......+ ..|.|.. ...+++|.|.|.++|.+|+++|+.++..+.+
T Consensus 303 k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~~ 370 (377)
T 1foe_A 303 RHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHR 370 (377)
T ss_dssp EEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHhh
Confidence 466888877776644322 3477761 2467999999999999999999999876543
No 94
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=82.74 E-value=1.3 Score=53.55 Aligned_cols=66 Identities=12% Similarity=0.079 Sum_probs=49.1
Q ss_pred CCceeEEeccCC------------ccceeEEeeeeEEeecCCC---CccEEEEeCC-cEEEEEcCChhhHHHHHHHHHHH
Q 042453 17 LPGSHFLSSVGS------------LAFGDLEGIISSFRESKSD---DRRFYIFTAT-KTLHLRTNSRRDRVAWIQALVST 80 (666)
Q Consensus 17 ~~~l~y~~~~~~------------~~~G~i~L~~a~i~~~~~d---~~~f~i~~~~-~~~~lra~~~~~r~~Wi~al~~~ 80 (666)
...|.||+.+.. .-++.|.|....|...... ...|.|...+ .++.|+|.|.++|.+||++|+.+
T Consensus 465 ~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~ 544 (1049)
T 3ksy_A 465 DGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISL 544 (1049)
T ss_dssp TTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCccccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHH
Confidence 466999987632 3456777777766554333 3578887765 48999999999999999999877
Q ss_pred hH
Q 042453 81 RS 82 (666)
Q Consensus 81 ~~ 82 (666)
+.
T Consensus 545 q~ 546 (1049)
T 3ksy_A 545 QY 546 (1049)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 95
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=80.94 E-value=0.52 Score=42.58 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=51.5
Q ss_pred CCceeEEeccCC------ccceeEEeeeeEEeecC--CCCccEEEEeCC--cEEEE--EcCChh-hHHHHHHHHHHHhHh
Q 042453 17 LPGSHFLSSVGS------LAFGDLEGIISSFRESK--SDDRRFYIFTAT--KTLHL--RTNSRR-DRVAWIQALVSTRSL 83 (666)
Q Consensus 17 ~~~l~y~~~~~~------~~~G~i~L~~a~i~~~~--~d~~~f~i~~~~--~~~~l--ra~~~~-~r~~Wi~al~~~~~~ 83 (666)
...|.+|+...+ .-+-.|.|....|.++. .|+++|-|-..+ ..+-+ +|.|.+ .|++||+.|+.++++
T Consensus 34 e~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lte~~~~~d~~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~ 113 (119)
T 1fho_A 34 RNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTDEDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEK 113 (119)
T ss_dssp TTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTTCCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHH
T ss_pred cCcEEEEEEecCCCCCcEEEeeEEeeceeEEEecCCCCCCcEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHHH
Confidence 457888987732 22345777777777664 478889997765 33556 899999 999999999998888
Q ss_pred CC
Q 042453 84 YP 85 (666)
Q Consensus 84 ~~ 85 (666)
+.
T Consensus 114 ~~ 115 (119)
T 1fho_A 114 YA 115 (119)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 96
>2rr3_B OSBP, oxysterol-binding protein 1; lipid transport, transport, protein-peptide complex, major S protein domain, protein binding; NMR {Homo sapiens}
Probab=77.32 E-value=1.1 Score=33.28 Aligned_cols=18 Identities=44% Similarity=0.811 Sum_probs=13.5
Q ss_pred cCccccccccccCccCCC
Q 042453 209 SDDDEISFYDTREFFTEP 226 (666)
Q Consensus 209 ~~~~e~~f~da~~~~~~~ 226 (666)
.+|+|.+||||-++++.+
T Consensus 14 dEDed~EfFDA~efITv~ 31 (47)
T 2rr3_B 14 DEDDENEFFDAPEIITMP 31 (47)
T ss_dssp CCCCSSCCBCCCSSCSSC
T ss_pred ccccccccccccceeEcc
Confidence 345668999999888654
No 97
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=74.93 E-value=4.3 Score=47.76 Aligned_cols=37 Identities=5% Similarity=0.085 Sum_probs=32.0
Q ss_pred CCccEEEEeCC-----cEEEEEcCChhhHHHHHHHHHHHhHh
Q 042453 47 DDRRFYIFTAT-----KTLHLRTNSRRDRVAWIQALVSTRSL 83 (666)
Q Consensus 47 d~~~f~i~~~~-----~~~~lra~~~~~r~~Wi~al~~~~~~ 83 (666)
.++-|+|..|+ ++|||-|.|+++...|++.|+.-...
T Consensus 95 e~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~ 136 (799)
T 2zkm_X 95 LLKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKH 136 (799)
T ss_dssp GGTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred ccceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 56789999986 36999999999999999999987654
No 98
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=71.08 E-value=7.6 Score=45.78 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=30.5
Q ss_pred CCccEEEEeCC-----cEEEEEcCChhhHHHHHHHHHHHh
Q 042453 47 DDRRFYIFTAT-----KTLHLRTNSRRDRVAWIQALVSTR 81 (666)
Q Consensus 47 d~~~f~i~~~~-----~~~~lra~~~~~r~~Wi~al~~~~ 81 (666)
+++.|||..|+ +++||-|.++++-+.|+++|+.-.
T Consensus 102 e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~ 141 (816)
T 3qr0_A 102 QDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYA 141 (816)
T ss_dssp HHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred cccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHH
Confidence 57899999985 456999999999999999998864
No 99
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=66.03 E-value=9.4 Score=35.16 Aligned_cols=78 Identities=12% Similarity=0.081 Sum_probs=58.0
Q ss_pred cceeeeeeeecC-CCc---eeEEe-ccCCccceeEEee-eeEEeec-----CCCCccEEEEeCCc-EEEEEcCChhhHHH
Q 042453 5 DEKLRIFFELLT-LPG---SHFLS-SVGSLAFGDLEGI-ISSFRES-----KSDDRRFYIFTATK-TLHLRTNSRRDRVA 72 (666)
Q Consensus 5 ~~~~~~~~~~~~-~~~---l~y~~-~~~~~~~G~i~L~-~a~i~~~-----~~d~~~f~i~~~~~-~~~lra~~~~~r~~ 72 (666)
.|+=+-+||.-+ .++ |-||. ++..+|+..|.+- +..||.. +..+.+|.|-+... .+-|.|.|..+-..
T Consensus 41 ~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~eyi~ea~d~~q~~s 120 (136)
T 1v5m_A 41 QWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHS 120 (136)
T ss_dssp CCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEECSSHHHHHH
T ss_pred chhheeeEEEEccCCCceEEEEecCCcccCCccccchhhhhhhhhccccccCCccceEEEEecCCcEEEEEcCCHHHHHH
Confidence 466677888776 444 55676 5567888887764 3334433 45789999999876 59999999999999
Q ss_pred HHHHHHHHhH
Q 042453 73 WIQALVSTRS 82 (666)
Q Consensus 73 Wi~al~~~~~ 82 (666)
|+..|+....
T Consensus 121 Wla~Ir~C~~ 130 (136)
T 1v5m_A 121 WVADIQGCVD 130 (136)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhcC
Confidence 9999987743
No 100
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=61.79 E-value=16 Score=43.47 Aligned_cols=38 Identities=8% Similarity=0.231 Sum_probs=31.6
Q ss_pred CCCCccEEEEeCCc-----EEEEEcCChhhHHHHHHHHHHHhH
Q 042453 45 KSDDRRFYIFTATK-----TLHLRTNSRRDRVAWIQALVSTRS 82 (666)
Q Consensus 45 ~~d~~~f~i~~~~~-----~~~lra~~~~~r~~Wi~al~~~~~ 82 (666)
...++.|+|..|.. ++||-|.|+++-+.|++.|++-..
T Consensus 97 ~~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~ 139 (885)
T 3ohm_B 97 RLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAM 139 (885)
T ss_dssp --CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred cccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHh
Confidence 45688999999853 699999999999999999988644
No 101
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=42.61 E-value=32 Score=34.96 Aligned_cols=50 Identities=14% Similarity=0.234 Sum_probs=40.4
Q ss_pred eeEEeeeeEEeec----CCCCccEEEEeC--CcEEEEEcCChhhHHHHHHHHHHHh
Q 042453 32 GDLEGIISSFRES----KSDDRRFYIFTA--TKTLHLRTNSRRDRVAWIQALVSTR 81 (666)
Q Consensus 32 G~i~L~~a~i~~~----~~d~~~f~i~~~--~~~~~lra~~~~~r~~Wi~al~~~~ 81 (666)
++|-|+-|-+.-. |..++.|.|... ..++.|||.|.++=.+|++||.+++
T Consensus 206 ~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i 261 (263)
T 1z87_A 206 KHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 261 (263)
T ss_dssp EEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHh
Confidence 7787887766432 336788888885 5679999999999999999999986
No 102
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=25.80 E-value=3.1e+02 Score=26.51 Aligned_cols=35 Identities=14% Similarity=0.294 Sum_probs=30.7
Q ss_pred CccEEEEeCC-cEEEEEcCChhhHHHHHHHHHHHhH
Q 042453 48 DRRFYIFTAT-KTLHLRTNSRRDRVAWIQALVSTRS 82 (666)
Q Consensus 48 ~~~f~i~~~~-~~~~lra~~~~~r~~Wi~al~~~~~ 82 (666)
++-|+|..+. ..+.|-|.|+++-..|++.|..-..
T Consensus 115 ~laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~Llg 150 (203)
T 3a98_B 115 ELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLG 150 (203)
T ss_dssp GGEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHTT
T ss_pred ceEEEEecCCCceEEEecCCHHHHHHHHHHHHHHhc
Confidence 3689999885 5799999999999999999998765
No 103
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=20.63 E-value=1.9e+02 Score=27.53 Aligned_cols=81 Identities=17% Similarity=0.140 Sum_probs=51.9
Q ss_pred ccceeeeeeeecCC--Cce-eEEeccC----Ccccee-EEeeeeEEee-cCCCCccEEEEeCCcEEEEEcCChhhHHHHH
Q 042453 4 EDEKLRIFFELLTL--PGS-HFLSSVG----SLAFGD-LEGIISSFRE-SKSDDRRFYIFTATKTLHLRTNSRRDRVAWI 74 (666)
Q Consensus 4 ~~~~~~~~~~~~~~--~~l-~y~~~~~----~~~~G~-i~L~~a~i~~-~~~d~~~f~i~~~~~~~~lra~~~~~r~~Wi 74 (666)
++.|-|+-++--+. ++- --|+++- .=..|. =.|+--..+. .+..+.-|+|+.+ |+++.+|.+..||..+|
T Consensus 62 ~~KK~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~~~~~gF~ltl~-K~Y~W~a~s~~Er~~FI 140 (171)
T 3hie_A 62 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLEISEGFILTMS-KKYYWETNSAKERTVFI 140 (171)
T ss_dssp GGEEEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECSSCTTEEEEESS-SEEEEECSSHHHHHHHH
T ss_pred CCccceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccCCCCCcEEEEeC-CeEEEecCCHHHHHHHH
Confidence 45566776666665 442 2244333 222222 2333322222 2346889999995 99999999999999999
Q ss_pred HHHHHHhHhCC
Q 042453 75 QALVSTRSLYP 85 (666)
Q Consensus 75 ~al~~~~~~~~ 85 (666)
..|-..-.+|.
T Consensus 141 ~sL~K~y~ky~ 151 (171)
T 3hie_A 141 KSLITLYIQTF 151 (171)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHHc
Confidence 99988866664
Done!