Query 042455
Match_columns 138
No_of_seqs 133 out of 2641
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 06:21:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042455.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042455hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4221 Short-chain alcohol de 100.0 3.1E-28 6.7E-33 167.6 11.9 114 21-138 3-118 (246)
2 COG0300 DltE Short-chain dehyd 99.9 6.2E-27 1.3E-31 164.7 12.8 116 21-137 3-120 (265)
3 KOG1205 Predicted dehydrogenas 99.9 4E-27 8.7E-32 166.7 11.6 119 19-137 7-127 (282)
4 KOG1208 Dehydrogenases with di 99.9 7.9E-26 1.7E-30 163.5 11.9 122 17-138 28-149 (314)
5 KOG1201 Hydroxysteroid 17-beta 99.9 2.3E-25 5E-30 157.2 12.6 118 18-138 32-151 (300)
6 PRK05854 short chain dehydroge 99.9 6.5E-25 1.4E-29 159.5 12.7 118 20-137 10-128 (313)
7 KOG0725 Reductases with broad 99.9 3.6E-24 7.8E-29 152.5 13.5 120 18-137 2-126 (270)
8 PRK07062 short chain dehydroge 99.9 6E-24 1.3E-28 150.7 13.6 119 19-137 3-123 (265)
9 PRK06079 enoyl-(acyl carrier p 99.9 7.7E-24 1.7E-28 149.5 12.4 113 20-137 3-123 (252)
10 PRK07478 short chain dehydroge 99.9 1.1E-23 2.5E-28 148.5 13.0 116 20-137 2-120 (254)
11 PRK08339 short chain dehydroge 99.9 1.3E-23 2.9E-28 149.2 13.4 116 20-137 4-121 (263)
12 PRK05867 short chain dehydroge 99.9 1.2E-23 2.6E-28 148.3 13.1 116 20-137 5-122 (253)
13 PRK06139 short chain dehydroge 99.9 1.3E-23 2.9E-28 153.7 13.5 116 20-137 3-120 (330)
14 PRK05876 short chain dehydroge 99.9 1.4E-23 3.1E-28 150.0 13.3 115 21-137 3-119 (275)
15 PRK07533 enoyl-(acyl carrier p 99.9 1.2E-23 2.5E-28 149.1 12.8 120 16-138 2-129 (258)
16 PRK07063 short chain dehydroge 99.9 2.3E-23 4.9E-28 147.4 13.4 117 21-137 4-122 (260)
17 PRK08415 enoyl-(acyl carrier p 99.9 2.5E-23 5.3E-28 148.8 13.2 115 21-138 2-124 (274)
18 PRK12481 2-deoxy-D-gluconate 3 99.9 3.1E-23 6.7E-28 146.4 13.0 114 20-137 4-119 (251)
19 PRK06197 short chain dehydroge 99.9 1.6E-23 3.5E-28 151.6 11.9 119 19-137 11-129 (306)
20 PRK08303 short chain dehydroge 99.9 3.1E-23 6.6E-28 150.3 13.1 116 20-137 4-136 (305)
21 PRK07791 short chain dehydroge 99.9 3.8E-23 8.3E-28 148.5 13.5 115 21-137 3-128 (286)
22 PRK06505 enoyl-(acyl carrier p 99.9 3.2E-23 6.9E-28 147.9 12.5 115 20-137 3-125 (271)
23 PRK07370 enoyl-(acyl carrier p 99.9 4.3E-23 9.3E-28 146.2 12.3 117 20-138 2-128 (258)
24 PRK08085 gluconate 5-dehydroge 99.9 6E-23 1.3E-27 144.8 13.0 117 19-137 4-122 (254)
25 PRK08862 short chain dehydroge 99.9 8.7E-23 1.9E-27 142.4 13.3 115 21-137 2-120 (227)
26 PRK07109 short chain dehydroge 99.9 7E-23 1.5E-27 150.1 13.3 116 20-137 4-121 (334)
27 PRK07889 enoyl-(acyl carrier p 99.9 4.3E-23 9.4E-28 146.1 11.8 113 20-137 3-125 (256)
28 PRK08589 short chain dehydroge 99.9 1E-22 2.2E-27 145.3 13.6 114 21-137 3-119 (272)
29 PRK05872 short chain dehydroge 99.9 7.1E-23 1.5E-27 147.7 12.9 117 18-137 3-121 (296)
30 PRK08594 enoyl-(acyl carrier p 99.9 7.2E-23 1.6E-27 145.0 12.7 117 20-137 3-127 (257)
31 PRK07984 enoyl-(acyl carrier p 99.9 7.9E-23 1.7E-27 145.3 12.7 113 22-137 4-125 (262)
32 PRK06114 short chain dehydroge 99.9 2E-22 4.3E-27 142.3 13.8 116 20-137 4-122 (254)
33 PRK09242 tropinone reductase; 99.9 1.7E-22 3.7E-27 142.7 13.2 120 18-137 3-124 (257)
34 PRK08265 short chain dehydroge 99.9 1.7E-22 3.6E-27 143.3 13.1 112 21-137 3-115 (261)
35 PRK06196 oxidoreductase; Provi 99.9 1.5E-22 3.2E-27 147.2 12.8 120 12-137 14-133 (315)
36 PRK06603 enoyl-(acyl carrier p 99.9 1.9E-22 4.2E-27 143.1 12.9 114 21-137 5-126 (260)
37 PRK07523 gluconate 5-dehydroge 99.9 2.2E-22 4.8E-27 141.9 13.1 117 19-137 5-123 (255)
38 PLN02253 xanthoxin dehydrogena 99.9 2.9E-22 6.2E-27 143.2 13.7 118 17-137 11-132 (280)
39 KOG1200 Mitochondrial/plastidi 99.9 1.1E-22 2.4E-27 135.8 10.6 115 21-138 11-127 (256)
40 PF00106 adh_short: short chai 99.9 9.4E-23 2E-27 135.3 10.2 111 25-137 1-116 (167)
41 PRK06194 hypothetical protein; 99.9 3.6E-22 7.8E-27 143.1 13.5 115 21-137 3-119 (287)
42 PRK08159 enoyl-(acyl carrier p 99.9 2.4E-22 5.3E-27 143.5 12.5 115 20-137 6-128 (272)
43 PRK08416 7-alpha-hydroxysteroi 99.9 2.4E-22 5.3E-27 142.3 12.4 118 19-137 3-129 (260)
44 PRK05717 oxidoreductase; Valid 99.9 2.6E-22 5.7E-27 141.7 12.4 116 17-137 3-122 (255)
45 PRK08690 enoyl-(acyl carrier p 99.9 2.4E-22 5.3E-27 142.6 12.3 114 21-137 3-125 (261)
46 PRK07453 protochlorophyllide o 99.9 2.9E-22 6.4E-27 146.0 13.0 116 20-137 2-120 (322)
47 KOG4169 15-hydroxyprostaglandi 99.9 1.4E-22 3E-27 138.0 10.5 112 20-138 1-112 (261)
48 PRK05866 short chain dehydroge 99.9 4.4E-22 9.6E-27 143.5 13.4 118 18-137 34-155 (293)
49 PRK08277 D-mannonate oxidoredu 99.9 5E-22 1.1E-26 141.8 13.1 118 18-137 4-138 (278)
50 PRK07097 gluconate 5-dehydroge 99.9 8E-22 1.7E-26 140.0 13.9 118 18-137 4-123 (265)
51 PRK07792 fabG 3-ketoacyl-(acyl 99.9 6.3E-22 1.4E-26 143.5 13.5 117 18-137 6-125 (306)
52 PRK08993 2-deoxy-D-gluconate 3 99.9 6.4E-22 1.4E-26 139.7 13.3 116 18-137 4-121 (253)
53 PRK06172 short chain dehydroge 99.9 7.1E-22 1.5E-26 139.2 13.1 116 20-137 3-121 (253)
54 PRK08278 short chain dehydroge 99.9 8.8E-22 1.9E-26 140.5 13.7 116 20-137 2-126 (273)
55 COG3967 DltE Short-chain dehyd 99.9 2.2E-22 4.9E-27 135.2 9.9 112 20-137 1-116 (245)
56 PRK07576 short chain dehydroge 99.9 7.8E-22 1.7E-26 140.1 13.1 118 18-137 3-122 (264)
57 PRK07035 short chain dehydroge 99.9 1.1E-21 2.3E-26 138.2 13.5 116 20-137 4-122 (252)
58 PRK06935 2-deoxy-D-gluconate 3 99.9 1.1E-21 2.4E-26 138.7 13.6 117 18-137 9-127 (258)
59 TIGR01289 LPOR light-dependent 99.9 8.1E-22 1.8E-26 143.4 13.0 113 23-137 2-118 (314)
60 PRK06200 2,3-dihydroxy-2,3-dih 99.9 8.6E-22 1.9E-26 139.6 12.4 112 21-137 3-121 (263)
61 PRK06128 oxidoreductase; Provi 99.9 2E-21 4.3E-26 140.4 14.4 115 21-137 52-171 (300)
62 PLN02730 enoyl-[acyl-carrier-p 99.9 5.1E-22 1.1E-26 143.6 11.2 119 19-138 4-159 (303)
63 PRK07677 short chain dehydroge 99.9 1.3E-21 2.8E-26 137.9 12.7 113 24-138 1-115 (252)
64 PRK07890 short chain dehydroge 99.9 1.5E-21 3.3E-26 137.7 13.0 115 21-137 2-119 (258)
65 PRK06124 gluconate 5-dehydroge 99.9 1.8E-21 4E-26 137.3 13.0 118 18-137 5-124 (256)
66 TIGR03325 BphB_TodD cis-2,3-di 99.9 1.1E-21 2.5E-26 139.0 11.8 112 21-137 2-120 (262)
67 PRK07814 short chain dehydroge 99.9 2.3E-21 5.1E-26 137.5 13.2 116 20-137 6-123 (263)
68 PRK08643 acetoin reductase; Va 99.9 2.3E-21 5E-26 136.8 13.1 112 24-137 2-115 (256)
69 PRK06398 aldose dehydrogenase; 99.9 1.5E-21 3.3E-26 138.2 12.1 104 21-137 3-108 (258)
70 PRK07067 sorbitol dehydrogenas 99.9 2.7E-21 5.9E-26 136.6 13.1 112 21-137 3-116 (257)
71 PRK12823 benD 1,6-dihydroxycyc 99.9 2.9E-21 6.4E-26 136.5 13.2 114 21-137 5-121 (260)
72 PRK07825 short chain dehydroge 99.9 2E-21 4.2E-26 138.4 12.3 111 21-137 2-114 (273)
73 PRK09186 flagellin modificatio 99.9 3.4E-21 7.4E-26 135.7 13.3 116 22-137 2-122 (256)
74 PRK06997 enoyl-(acyl carrier p 99.9 2E-21 4.3E-26 137.9 12.1 113 22-137 4-125 (260)
75 PRK08628 short chain dehydroge 99.9 3.7E-21 8.1E-26 135.8 13.1 115 20-137 3-118 (258)
76 PRK07985 oxidoreductase; Provi 99.9 4.8E-21 1E-25 138.2 13.8 115 21-137 46-165 (294)
77 PRK07831 short chain dehydroge 99.9 5.7E-21 1.2E-25 135.3 13.9 117 21-137 14-133 (262)
78 PRK08251 short chain dehydroge 99.9 4.6E-21 1E-25 134.6 13.1 114 24-137 2-117 (248)
79 PRK06113 7-alpha-hydroxysteroi 99.9 6.4E-21 1.4E-25 134.6 13.9 117 19-137 6-123 (255)
80 PRK07666 fabG 3-ketoacyl-(acyl 99.9 5.4E-21 1.2E-25 133.7 13.3 115 21-137 4-120 (239)
81 TIGR01832 kduD 2-deoxy-D-gluco 99.9 5.1E-21 1.1E-25 134.4 13.1 113 21-137 2-116 (248)
82 PRK12384 sorbitol-6-phosphate 99.9 6.2E-21 1.4E-25 134.8 13.5 114 24-137 2-117 (259)
83 PRK06484 short chain dehydroge 99.9 3.4E-21 7.4E-26 148.1 13.0 112 21-137 266-380 (520)
84 PRK08936 glucose-1-dehydrogena 99.9 6.6E-21 1.4E-25 134.9 13.5 115 21-137 4-121 (261)
85 PRK13394 3-hydroxybutyrate deh 99.9 8.1E-21 1.8E-25 134.2 13.8 115 21-137 4-120 (262)
86 PRK07774 short chain dehydroge 99.9 6.3E-21 1.4E-25 134.0 12.9 116 20-137 2-122 (250)
87 PRK06500 short chain dehydroge 99.9 5.7E-21 1.2E-25 134.0 12.5 112 21-137 3-116 (249)
88 PRK06138 short chain dehydroge 99.9 8.7E-21 1.9E-25 133.3 13.5 114 21-137 2-117 (252)
89 PRK12939 short chain dehydroge 99.9 1.1E-20 2.3E-25 132.6 13.3 115 21-137 4-120 (250)
90 PRK06949 short chain dehydroge 99.9 1.4E-20 3E-25 132.8 13.9 117 19-137 4-122 (258)
91 PRK07856 short chain dehydroge 99.9 5.4E-21 1.2E-25 134.8 11.8 108 20-137 2-111 (252)
92 PRK06463 fabG 3-ketoacyl-(acyl 99.9 7.8E-21 1.7E-25 134.1 12.4 111 20-137 3-115 (255)
93 PRK05855 short chain dehydroge 99.9 7.2E-21 1.6E-25 147.4 13.3 116 20-137 311-428 (582)
94 PRK08226 short chain dehydroge 99.9 1.2E-20 2.6E-25 133.6 13.2 114 21-137 3-118 (263)
95 KOG1199 Short-chain alcohol de 99.9 4.6E-21 9.9E-26 126.2 10.1 114 20-138 5-126 (260)
96 PRK06484 short chain dehydroge 99.9 6.8E-21 1.5E-25 146.5 12.6 111 22-137 3-117 (520)
97 PRK08063 enoyl-(acyl carrier p 99.9 1.3E-20 2.7E-25 132.4 12.8 114 22-137 2-118 (250)
98 PRK06125 short chain dehydroge 99.9 1.5E-20 3.3E-25 132.9 13.3 113 20-137 3-117 (259)
99 PRK12743 oxidoreductase; Provi 99.9 1.2E-20 2.6E-25 133.3 12.7 113 23-137 1-116 (256)
100 PRK09134 short chain dehydroge 99.9 1.7E-20 3.7E-25 132.6 13.4 115 21-137 6-123 (258)
101 PRK12744 short chain dehydroge 99.9 1.7E-20 3.6E-25 132.6 13.2 115 21-137 5-125 (257)
102 PRK07231 fabG 3-ketoacyl-(acyl 99.9 1.6E-20 3.5E-25 131.8 12.9 114 21-137 2-118 (251)
103 PRK12747 short chain dehydroge 99.9 1.7E-20 3.7E-25 132.1 13.0 114 22-137 2-124 (252)
104 PRK08213 gluconate 5-dehydroge 99.9 1.6E-20 3.5E-25 132.8 12.8 116 20-137 8-125 (259)
105 PRK12936 3-ketoacyl-(acyl-carr 99.9 1.9E-20 4.1E-25 131.0 13.0 112 21-137 3-116 (245)
106 PRK07024 short chain dehydroge 99.9 1.2E-20 2.6E-25 133.4 12.1 111 24-137 2-115 (257)
107 PRK12859 3-ketoacyl-(acyl-carr 99.9 1.8E-20 3.8E-25 132.6 12.9 115 21-137 3-132 (256)
108 PRK08340 glucose-1-dehydrogena 99.9 1.5E-20 3.3E-25 133.0 12.3 109 26-137 2-114 (259)
109 PRK06171 sorbitol-6-phosphate 99.9 1.2E-20 2.7E-25 133.8 11.9 109 18-137 3-122 (266)
110 PRK05875 short chain dehydroge 99.9 2.5E-20 5.4E-25 132.9 13.2 117 21-137 4-123 (276)
111 PRK12938 acetyacetyl-CoA reduc 99.9 2E-20 4.3E-25 131.2 12.4 114 22-137 1-117 (246)
112 PRK05599 hypothetical protein; 99.8 1.3E-20 2.8E-25 132.7 11.4 111 25-137 1-113 (246)
113 PLN00015 protochlorophyllide r 99.8 1.1E-20 2.3E-25 137.1 11.3 108 28-137 1-112 (308)
114 PRK06182 short chain dehydroge 99.8 1.5E-20 3.2E-25 134.0 11.7 108 22-137 1-110 (273)
115 PRK09072 short chain dehydroge 99.8 2.7E-20 5.9E-25 131.9 13.0 113 21-137 2-116 (263)
116 PRK08263 short chain dehydroge 99.8 2E-20 4.4E-25 133.5 12.3 111 22-137 1-113 (275)
117 PRK06483 dihydromonapterin red 99.8 2.3E-20 5E-25 130.3 12.3 107 24-137 2-110 (236)
118 PRK12748 3-ketoacyl-(acyl-carr 99.8 2.9E-20 6.3E-25 131.3 12.9 115 21-137 2-131 (256)
119 PRK07454 short chain dehydroge 99.8 3.3E-20 7.2E-25 129.8 13.1 113 23-137 5-119 (241)
120 PRK12429 3-hydroxybutyrate deh 99.8 3.6E-20 7.8E-25 130.5 13.3 114 22-137 2-117 (258)
121 PRK06180 short chain dehydroge 99.8 2E-20 4.4E-25 133.6 12.1 111 22-137 2-114 (277)
122 PLN02780 ketoreductase/ oxidor 99.8 1.1E-20 2.4E-25 137.8 10.9 114 22-137 51-170 (320)
123 PRK06720 hypothetical protein; 99.8 4.7E-20 1E-24 123.3 13.0 94 20-115 12-105 (169)
124 PRK12937 short chain dehydroge 99.8 4.4E-20 9.5E-25 129.2 13.4 115 21-137 2-119 (245)
125 PRK06523 short chain dehydroge 99.8 2E-20 4.2E-25 132.3 11.6 109 18-137 3-115 (260)
126 PRK05650 short chain dehydroge 99.8 3.4E-20 7.4E-25 131.9 12.8 111 25-137 1-113 (270)
127 TIGR02415 23BDH acetoin reduct 99.8 3.7E-20 8.1E-25 130.3 12.8 111 25-137 1-113 (254)
128 TIGR02632 RhaD_aldol-ADH rhamn 99.8 2.9E-20 6.3E-25 146.9 13.4 119 19-137 409-529 (676)
129 TIGR03206 benzo_BadH 2-hydroxy 99.8 4.7E-20 1E-24 129.5 12.7 114 22-137 1-116 (250)
130 PRK06914 short chain dehydroge 99.8 5.1E-20 1.1E-24 131.5 12.9 115 22-137 1-117 (280)
131 PRK06701 short chain dehydroge 99.8 6.9E-20 1.5E-24 131.9 13.5 115 21-137 43-161 (290)
132 PRK06179 short chain dehydroge 99.8 2.7E-20 5.9E-25 132.3 11.2 105 23-137 3-109 (270)
133 PRK06841 short chain dehydroge 99.8 5.7E-20 1.2E-24 129.5 12.7 113 20-137 11-125 (255)
134 KOG1209 1-Acyl dihydroxyaceton 99.8 4.5E-20 9.6E-25 125.0 11.1 109 23-138 6-118 (289)
135 PRK07775 short chain dehydroge 99.8 9.2E-20 2E-24 130.1 13.5 115 21-137 7-123 (274)
136 PRK06198 short chain dehydroge 99.8 7.6E-20 1.7E-24 129.2 12.9 115 21-137 3-120 (260)
137 PRK12935 acetoacetyl-CoA reduc 99.8 9.2E-20 2E-24 127.9 13.1 115 21-137 3-120 (247)
138 PRK08217 fabG 3-ketoacyl-(acyl 99.8 1E-19 2.3E-24 127.7 13.4 115 21-137 2-127 (253)
139 PRK08703 short chain dehydroge 99.8 7.9E-20 1.7E-24 127.8 12.6 116 21-137 3-124 (239)
140 PRK07832 short chain dehydroge 99.8 6.7E-20 1.4E-24 130.6 12.4 112 25-137 1-114 (272)
141 PRK08267 short chain dehydroge 99.8 8E-20 1.7E-24 129.3 12.3 109 25-137 2-113 (260)
142 PRK08642 fabG 3-ketoacyl-(acyl 99.8 1E-19 2.2E-24 128.0 12.6 112 21-137 2-123 (253)
143 PRK06123 short chain dehydroge 99.8 9.5E-20 2.1E-24 127.8 12.4 112 24-137 2-117 (248)
144 COG1028 FabG Dehydrogenases wi 99.8 1.3E-19 2.9E-24 127.4 13.1 115 21-137 2-123 (251)
145 PRK07326 short chain dehydroge 99.8 1.5E-19 3.1E-24 126.1 13.1 114 21-137 3-118 (237)
146 TIGR01500 sepiapter_red sepiap 99.8 1.3E-19 2.7E-24 128.2 12.7 112 26-137 2-126 (256)
147 PRK12826 3-ketoacyl-(acyl-carr 99.8 1.8E-19 3.9E-24 126.4 13.2 115 21-137 3-119 (251)
148 PRK12746 short chain dehydroge 99.8 1.7E-19 3.7E-24 127.0 12.8 115 21-137 3-126 (254)
149 PRK06947 glucose-1-dehydrogena 99.8 2.1E-19 4.5E-24 126.2 12.9 112 24-137 2-117 (248)
150 PRK05993 short chain dehydroge 99.8 1.2E-19 2.6E-24 129.7 11.7 107 23-137 3-112 (277)
151 PRK06057 short chain dehydroge 99.8 1.9E-19 4E-24 127.1 12.5 110 21-137 4-117 (255)
152 PRK06300 enoyl-(acyl carrier p 99.8 2.7E-20 5.7E-25 134.6 8.2 120 18-138 2-158 (299)
153 PRK05565 fabG 3-ketoacyl-(acyl 99.8 2.2E-19 4.7E-24 125.7 12.6 115 21-137 2-119 (247)
154 PRK12745 3-ketoacyl-(acyl-carr 99.8 2.6E-19 5.6E-24 126.2 13.1 112 24-137 2-118 (256)
155 PRK06940 short chain dehydroge 99.8 1.6E-19 3.5E-24 129.1 12.2 105 24-138 2-106 (275)
156 PRK07904 short chain dehydroge 99.8 2.2E-19 4.7E-24 127.0 12.6 113 23-137 7-123 (253)
157 PRK09135 pteridine reductase; 99.8 3.6E-19 7.9E-24 124.7 13.6 115 22-137 4-121 (249)
158 PRK05653 fabG 3-ketoacyl-(acyl 99.8 3.3E-19 7.1E-24 124.5 13.0 115 21-137 2-118 (246)
159 PRK06482 short chain dehydroge 99.8 2.1E-19 4.5E-24 128.2 12.0 109 24-137 2-112 (276)
160 PRK05693 short chain dehydroge 99.8 1.7E-19 3.8E-24 128.6 11.6 105 25-137 2-108 (274)
161 PRK10538 malonic semialdehyde 99.8 2.6E-19 5.5E-24 126.0 12.3 107 26-137 2-111 (248)
162 PRK08945 putative oxoacyl-(acy 99.8 3.2E-19 6.9E-24 125.3 12.6 116 21-137 9-129 (247)
163 PRK12828 short chain dehydroge 99.8 3.7E-19 8.1E-24 123.9 12.8 114 20-137 3-118 (239)
164 PRK07069 short chain dehydroge 99.8 3.1E-19 6.8E-24 125.3 12.4 111 27-137 2-115 (251)
165 PRK08220 2,3-dihydroxybenzoate 99.8 3E-19 6.6E-24 125.5 12.3 107 20-137 4-112 (252)
166 PRK06181 short chain dehydroge 99.8 3.4E-19 7.3E-24 126.2 12.5 112 24-137 1-115 (263)
167 PRK06077 fabG 3-ketoacyl-(acyl 99.8 8.2E-19 1.8E-23 123.3 13.5 116 20-137 2-120 (252)
168 PRK12827 short chain dehydroge 99.8 6.5E-19 1.4E-23 123.4 13.0 115 21-137 3-123 (249)
169 PRK09730 putative NAD(P)-bindi 99.8 8.1E-19 1.8E-23 122.9 12.8 111 25-137 2-116 (247)
170 PRK07201 short chain dehydroge 99.8 4.7E-19 1E-23 139.6 12.9 115 21-137 368-486 (657)
171 PRK05557 fabG 3-ketoacyl-(acyl 99.8 1.3E-18 2.9E-23 121.5 13.3 115 21-137 2-119 (248)
172 PRK12829 short chain dehydroge 99.8 1E-18 2.2E-23 123.6 12.3 114 20-137 7-123 (264)
173 PRK07074 short chain dehydroge 99.8 1.1E-18 2.5E-23 123.1 12.5 110 24-137 2-113 (257)
174 TIGR02685 pter_reduc_Leis pter 99.8 7.2E-19 1.6E-23 125.0 11.4 112 25-137 2-131 (267)
175 TIGR01831 fabG_rel 3-oxoacyl-( 99.8 1E-18 2.2E-23 122.0 11.7 109 27-137 1-112 (239)
176 TIGR01829 AcAcCoA_reduct aceto 99.8 2.2E-18 4.7E-23 120.4 13.0 111 25-137 1-114 (242)
177 PRK12824 acetoacetyl-CoA reduc 99.8 1.8E-18 3.9E-23 121.0 12.5 112 24-137 2-116 (245)
178 KOG1207 Diacetyl reductase/L-x 99.8 1.3E-19 2.8E-24 119.4 5.9 110 20-138 3-114 (245)
179 TIGR01963 PHB_DH 3-hydroxybuty 99.8 2.8E-18 6.2E-23 120.6 13.0 112 24-137 1-114 (255)
180 KOG1014 17 beta-hydroxysteroid 99.8 6.7E-19 1.5E-23 125.0 9.7 113 23-137 48-164 (312)
181 PRK07102 short chain dehydroge 99.8 3.6E-18 7.9E-23 119.7 12.2 109 25-137 2-112 (243)
182 KOG1478 3-keto sterol reductas 99.8 2E-18 4.4E-23 119.6 10.4 116 23-138 2-153 (341)
183 PRK08324 short chain dehydroge 99.8 3.6E-18 7.8E-23 135.3 13.0 114 21-137 419-534 (681)
184 PRK12825 fabG 3-ketoacyl-(acyl 99.8 7.3E-18 1.6E-22 117.8 13.2 115 21-137 3-120 (249)
185 PRK12367 short chain dehydroge 99.8 1.8E-18 4E-23 121.9 10.1 104 19-137 9-112 (245)
186 PRK12742 oxidoreductase; Provi 99.8 4.2E-18 9.2E-23 118.7 11.8 106 21-137 3-111 (237)
187 PRK05786 fabG 3-ketoacyl-(acyl 99.8 6.7E-18 1.5E-22 117.8 12.5 114 21-137 2-115 (238)
188 PF08659 KR: KR domain; Inter 99.8 2.7E-18 5.8E-23 116.0 10.1 110 26-137 2-117 (181)
189 PRK07806 short chain dehydroge 99.8 4.8E-18 1E-22 119.3 11.4 111 21-137 3-114 (248)
190 KOG1610 Corticosteroid 11-beta 99.8 6.4E-18 1.4E-22 120.2 11.9 113 21-137 26-143 (322)
191 PRK06101 short chain dehydroge 99.8 5.6E-18 1.2E-22 118.7 10.6 104 25-137 2-107 (240)
192 PRK07060 short chain dehydroge 99.8 7.3E-18 1.6E-22 118.0 11.2 109 18-137 3-113 (245)
193 PRK08261 fabG 3-ketoacyl-(acyl 99.8 1.3E-17 2.7E-22 126.6 11.8 112 21-137 207-320 (450)
194 PRK06924 short chain dehydroge 99.8 1.7E-17 3.6E-22 116.7 11.5 108 25-137 2-117 (251)
195 PRK09291 short chain dehydroge 99.7 2.4E-17 5.2E-22 116.2 11.7 106 24-137 2-109 (257)
196 KOG1611 Predicted short chain- 99.7 3.4E-17 7.3E-22 111.8 11.6 114 22-137 1-121 (249)
197 PF13561 adh_short_C2: Enoyl-( 99.7 8.4E-18 1.8E-22 117.9 8.8 104 31-137 1-113 (241)
198 PRK06550 fabG 3-ketoacyl-(acyl 99.7 1.3E-17 2.7E-22 116.3 9.6 100 21-137 2-104 (235)
199 PRK07041 short chain dehydroge 99.7 2.1E-17 4.5E-22 114.9 10.4 103 28-137 1-105 (230)
200 PRK08264 short chain dehydroge 99.7 3.2E-17 6.9E-22 114.5 11.3 105 20-137 2-110 (238)
201 TIGR01830 3oxo_ACP_reduc 3-oxo 99.7 4.1E-17 9E-22 113.6 11.8 109 27-137 1-112 (239)
202 PRK05884 short chain dehydroge 99.7 2.5E-17 5.4E-22 114.5 10.4 103 26-138 2-111 (223)
203 PRK07424 bifunctional sterol d 99.7 3.2E-17 6.8E-22 122.6 11.6 105 20-137 174-278 (406)
204 PRK08177 short chain dehydroge 99.7 4.3E-17 9.2E-22 113.2 11.3 104 25-137 2-109 (225)
205 smart00822 PKS_KR This enzymat 99.7 4.5E-17 9.8E-22 108.0 11.0 111 25-137 1-117 (180)
206 KOG1210 Predicted 3-ketosphing 99.7 2.8E-17 6.1E-22 116.9 10.2 114 25-138 34-149 (331)
207 PRK07023 short chain dehydroge 99.7 5.4E-17 1.2E-21 113.8 11.1 105 26-137 3-114 (243)
208 PRK07577 short chain dehydroge 99.7 5.9E-17 1.3E-21 112.8 11.0 102 22-137 1-104 (234)
209 TIGR02813 omega_3_PfaA polyket 99.7 4.8E-17 1E-21 141.0 12.5 112 23-137 1996-2157(2582)
210 COG0623 FabI Enoyl-[acyl-carri 99.7 1.9E-16 4.1E-21 108.3 12.4 113 20-135 2-122 (259)
211 PRK06953 short chain dehydroge 99.7 1.5E-16 3.3E-21 110.2 11.1 103 25-137 2-108 (222)
212 PRK08017 oxidoreductase; Provi 99.7 2.3E-16 5E-21 111.1 11.1 106 24-137 2-110 (256)
213 PRK07578 short chain dehydroge 99.7 3.4E-16 7.4E-21 106.8 8.7 88 26-137 2-91 (199)
214 PRK09009 C factor cell-cell si 99.7 9.8E-16 2.1E-20 106.8 10.2 99 25-137 1-109 (235)
215 PRK08219 short chain dehydroge 99.7 1.3E-15 2.8E-20 105.4 10.6 103 24-137 3-107 (227)
216 PRK13656 trans-2-enoyl-CoA red 99.6 7.2E-15 1.6E-19 108.4 11.5 90 22-114 39-142 (398)
217 COG1086 Predicted nucleoside-d 99.6 7.6E-15 1.7E-19 111.6 10.5 110 21-138 247-358 (588)
218 PLN02989 cinnamyl-alcohol dehy 99.6 7.4E-15 1.6E-19 107.1 10.0 106 23-137 4-109 (325)
219 TIGR02622 CDP_4_6_dhtase CDP-g 99.6 1.8E-14 3.9E-19 106.1 10.6 106 22-137 2-107 (349)
220 PLN03209 translocon at the inn 99.6 4.9E-14 1.1E-18 108.6 11.1 105 21-136 77-188 (576)
221 TIGR03589 PseB UDP-N-acetylglu 99.5 4.9E-14 1.1E-18 103.0 10.1 102 22-137 2-106 (324)
222 PLN02653 GDP-mannose 4,6-dehyd 99.5 5.9E-14 1.3E-18 103.0 9.4 110 21-137 3-115 (340)
223 PLN02240 UDP-glucose 4-epimera 99.5 1.4E-13 3E-18 101.2 10.7 110 21-137 2-113 (352)
224 PLN02572 UDP-sulfoquinovose sy 99.5 1.5E-13 3.2E-18 104.4 10.8 111 21-137 44-171 (442)
225 PLN02986 cinnamyl-alcohol dehy 99.5 2.9E-13 6.3E-18 98.6 10.0 105 22-136 3-107 (322)
226 PF02719 Polysacc_synt_2: Poly 99.5 1.4E-14 3.1E-19 103.5 3.0 103 27-137 1-109 (293)
227 TIGR01472 gmd GDP-mannose 4,6- 99.5 4.2E-13 9.1E-18 98.6 9.4 105 25-136 1-109 (343)
228 PLN02896 cinnamyl-alcohol dehy 99.4 1.3E-12 2.8E-17 96.5 10.9 85 21-115 7-91 (353)
229 PLN02662 cinnamyl-alcohol dehy 99.4 1.7E-12 3.8E-17 94.3 9.7 103 23-136 3-106 (322)
230 PRK10217 dTDP-glucose 4,6-dehy 99.4 1.2E-12 2.7E-17 96.4 8.9 104 25-137 2-106 (355)
231 PLN00198 anthocyanidin reducta 99.4 3.4E-12 7.4E-17 93.6 10.7 105 22-137 7-111 (338)
232 PLN02650 dihydroflavonol-4-red 99.4 2.8E-12 6E-17 94.6 10.1 105 23-137 4-108 (351)
233 PLN02214 cinnamoyl-CoA reducta 99.4 2.9E-12 6.2E-17 94.4 10.1 100 22-137 8-108 (342)
234 PRK08309 short chain dehydroge 99.4 1.3E-11 2.7E-16 83.2 11.1 85 26-114 2-86 (177)
235 PLN02583 cinnamoyl-CoA reducta 99.4 9.8E-12 2.1E-16 89.9 10.3 103 22-137 4-108 (297)
236 TIGR02114 coaB_strep phosphopa 99.3 4.3E-12 9.2E-17 88.6 7.4 93 27-133 17-112 (227)
237 KOG1204 Predicted dehydrogenas 99.3 7.2E-13 1.6E-17 90.8 2.9 112 23-137 5-121 (253)
238 KOG1502 Flavonol reductase/cin 99.3 2E-11 4.2E-16 88.4 9.5 103 23-137 5-109 (327)
239 PRK10675 UDP-galactose-4-epime 99.3 2.8E-11 6.1E-16 88.6 10.4 103 26-136 2-104 (338)
240 PLN02657 3,8-divinyl protochlo 99.3 4E-11 8.6E-16 89.9 11.0 89 20-113 56-146 (390)
241 PRK15181 Vi polysaccharide bio 99.3 2.4E-11 5.2E-16 89.6 9.4 109 20-137 11-122 (348)
242 TIGR01181 dTDP_gluc_dehyt dTDP 99.3 2.2E-11 4.7E-16 88.0 8.7 101 26-136 1-104 (317)
243 TIGR01179 galE UDP-glucose-4-e 99.3 3.1E-11 6.7E-16 87.5 8.7 101 26-136 1-101 (328)
244 PRK10084 dTDP-glucose 4,6 dehy 99.3 4.1E-11 8.8E-16 88.3 9.3 103 26-137 2-105 (352)
245 TIGR03466 HpnA hopanoid-associ 99.2 6.1E-11 1.3E-15 86.2 7.6 92 26-136 2-93 (328)
246 PLN02686 cinnamoyl-CoA reducta 99.2 5.8E-10 1.2E-14 83.0 10.9 88 19-114 48-139 (367)
247 KOG1371 UDP-glucose 4-epimeras 99.1 3E-10 6.5E-15 81.7 8.2 107 24-137 2-109 (343)
248 PF01370 Epimerase: NAD depend 99.1 5.2E-10 1.1E-14 77.7 9.3 95 27-135 1-95 (236)
249 COG1087 GalE UDP-glucose 4-epi 99.1 5.4E-10 1.2E-14 79.8 9.3 98 26-137 2-99 (329)
250 PLN02427 UDP-apiose/xylose syn 99.1 2.9E-10 6.2E-15 85.0 8.4 86 22-115 12-98 (386)
251 PF01073 3Beta_HSD: 3-beta hyd 99.1 1.6E-10 3.4E-15 83.1 6.6 95 28-137 1-97 (280)
252 PRK05579 bifunctional phosphop 99.1 7.4E-10 1.6E-14 83.1 9.3 79 20-114 184-278 (399)
253 PLN00141 Tic62-NAD(P)-related 99.1 1.3E-09 2.8E-14 77.0 9.4 82 22-114 15-96 (251)
254 PRK12548 shikimate 5-dehydroge 99.1 1.2E-09 2.6E-14 78.9 9.3 84 21-114 123-210 (289)
255 PF13460 NAD_binding_10: NADH( 99.1 1.9E-09 4.2E-14 72.4 9.6 71 27-114 1-71 (183)
256 COG1088 RfbB dTDP-D-glucose 4, 99.1 5.7E-10 1.2E-14 79.6 6.7 102 25-137 1-106 (340)
257 PLN02260 probable rhamnose bio 99.0 1.7E-09 3.7E-14 86.1 10.0 106 22-136 4-111 (668)
258 PRK11908 NAD-dependent epimera 99.0 1.6E-09 3.6E-14 79.8 7.7 77 25-115 2-80 (347)
259 TIGR01214 rmlD dTDP-4-dehydror 99.0 1.3E-09 2.9E-14 78.0 6.6 80 27-136 2-81 (287)
260 PRK12428 3-alpha-hydroxysteroi 99.0 5.9E-10 1.3E-14 78.2 4.7 76 40-137 1-76 (241)
261 CHL00194 ycf39 Ycf39; Provisio 99.0 4.8E-09 1E-13 76.5 9.1 74 26-114 2-75 (317)
262 PRK08125 bifunctional UDP-gluc 99.0 2.6E-09 5.6E-14 85.0 8.1 97 23-136 314-413 (660)
263 PRK09987 dTDP-4-dehydrorhamnos 98.9 2.3E-09 5E-14 77.7 6.4 84 26-136 2-85 (299)
264 PRK11150 rfaD ADP-L-glycero-D- 98.9 3.4E-09 7.4E-14 76.7 7.1 94 27-136 2-97 (308)
265 PLN02695 GDP-D-mannose-3',5'-e 98.9 4.6E-09 9.9E-14 78.3 7.9 78 22-114 19-96 (370)
266 cd01078 NAD_bind_H4MPT_DH NADP 98.9 2.1E-08 4.5E-13 68.4 10.2 85 20-114 24-108 (194)
267 TIGR01746 Thioester-redct thio 98.9 1.2E-08 2.5E-13 75.0 9.5 87 26-115 1-100 (367)
268 COG0451 WcaG Nucleoside-diphos 98.9 2.8E-09 6E-14 77.0 5.9 94 27-136 3-96 (314)
269 TIGR02197 heptose_epim ADP-L-g 98.9 6E-09 1.3E-13 75.4 6.7 94 27-136 1-95 (314)
270 PRK05865 hypothetical protein; 98.9 1.1E-08 2.3E-13 82.9 8.5 72 26-115 2-73 (854)
271 TIGR00521 coaBC_dfp phosphopan 98.9 2E-08 4.3E-13 75.2 9.0 78 21-114 182-276 (390)
272 COG1091 RfbD dTDP-4-dehydrorha 98.8 7.8E-09 1.7E-13 73.9 6.1 80 27-137 3-82 (281)
273 PF04321 RmlD_sub_bind: RmlD s 98.8 5.7E-09 1.2E-13 75.3 5.5 81 26-136 2-82 (286)
274 PLN02206 UDP-glucuronate decar 98.8 1.6E-08 3.4E-13 77.1 7.7 99 22-137 117-215 (442)
275 COG1089 Gmd GDP-D-mannose dehy 98.8 6.9E-09 1.5E-13 73.7 4.6 106 24-136 2-109 (345)
276 PRK06732 phosphopantothenate-- 98.8 5.7E-08 1.2E-12 68.0 9.1 95 26-134 17-114 (229)
277 PLN02778 3,5-epimerase/4-reduc 98.8 3.7E-08 7.9E-13 71.4 8.3 82 25-137 10-92 (298)
278 PLN02166 dTDP-glucose 4,6-dehy 98.8 3.7E-08 8.1E-13 74.9 8.0 96 23-136 119-215 (436)
279 TIGR01777 yfcH conserved hypot 98.8 4.1E-08 8.9E-13 70.2 7.8 90 27-136 1-90 (292)
280 PLN02996 fatty acyl-CoA reduct 98.8 7.2E-08 1.6E-12 74.4 9.3 103 22-136 9-140 (491)
281 PLN02503 fatty acyl-CoA reduct 98.7 1.5E-07 3.2E-12 74.1 10.3 103 22-136 117-247 (605)
282 TIGR03649 ergot_EASG ergot alk 98.7 4.1E-08 8.9E-13 70.4 6.7 76 26-113 1-77 (285)
283 PLN02725 GDP-4-keto-6-deoxyman 98.7 3.1E-08 6.7E-13 71.5 5.0 60 28-114 1-60 (306)
284 PRK07201 short chain dehydroge 98.7 1.8E-07 3.8E-12 74.3 9.5 83 26-114 2-88 (657)
285 KOG1202 Animal-type fatty acid 98.6 1.9E-07 4.1E-12 77.0 8.7 116 20-138 1764-1885(2376)
286 COG1748 LYS9 Saccharopine dehy 98.6 2.4E-07 5.2E-12 69.1 8.5 77 25-114 2-79 (389)
287 KOG1430 C-3 sterol dehydrogena 98.6 1.6E-07 3.4E-12 69.5 7.4 103 22-136 2-106 (361)
288 PF07993 NAD_binding_4: Male s 98.6 1.3E-07 2.8E-12 66.8 6.2 96 29-136 1-115 (249)
289 PF01488 Shikimate_DH: Shikima 98.6 6E-07 1.3E-11 57.9 8.5 78 21-115 9-87 (135)
290 PRK14106 murD UDP-N-acetylmura 98.6 4.6E-07 1E-11 69.1 8.8 77 21-114 2-79 (450)
291 PF03435 Saccharop_dh: Sacchar 98.5 3.3E-07 7.3E-12 68.6 7.4 76 27-114 1-78 (386)
292 PF05368 NmrA: NmrA-like famil 98.5 1.2E-06 2.5E-11 61.2 9.4 75 27-114 1-75 (233)
293 PLN02260 probable rhamnose bio 98.5 4.7E-07 1E-11 72.3 8.0 83 24-137 380-463 (668)
294 KOG2865 NADH:ubiquinone oxidor 98.5 1.2E-06 2.6E-11 62.7 8.6 84 22-115 59-142 (391)
295 PLN00016 RNA-binding protein; 98.4 9.6E-07 2.1E-11 66.0 7.7 79 22-112 50-139 (378)
296 PRK12320 hypothetical protein; 98.4 1.6E-06 3.6E-11 69.2 8.5 70 26-114 2-71 (699)
297 PRK09620 hypothetical protein; 98.4 1E-06 2.2E-11 61.7 6.0 82 22-114 1-98 (229)
298 KOG2733 Uncharacterized membra 98.3 4.2E-06 9.1E-11 61.4 8.1 82 26-114 7-94 (423)
299 COG0702 Predicted nucleoside-d 98.3 5.6E-06 1.2E-10 58.7 8.3 73 26-114 2-74 (275)
300 PRK14982 acyl-ACP reductase; P 98.3 4.4E-06 9.5E-11 61.6 7.7 74 21-115 152-227 (340)
301 COG3320 Putative dehydrogenase 98.2 1.6E-05 3.4E-10 58.9 9.5 83 25-114 1-98 (382)
302 KOG1429 dTDP-glucose 4-6-dehyd 98.2 4E-06 8.6E-11 60.0 5.6 99 21-137 24-123 (350)
303 COG1090 Predicted nucleoside-d 98.2 3.4E-06 7.4E-11 60.0 4.9 37 27-63 1-37 (297)
304 PRK02472 murD UDP-N-acetylmura 98.2 8.1E-06 1.8E-10 62.3 7.2 78 21-114 2-79 (447)
305 KOG1221 Acyl-CoA reductase [Li 98.1 5.2E-06 1.1E-10 63.2 5.6 107 22-136 10-134 (467)
306 cd01065 NAD_bind_Shikimate_DH 98.1 2.8E-05 6E-10 50.9 8.3 76 21-114 16-92 (155)
307 TIGR00507 aroE shikimate 5-deh 98.0 5.3E-05 1.2E-09 54.3 9.0 75 22-114 115-189 (270)
308 PRK12475 thiamine/molybdopteri 98.0 6.9E-05 1.5E-09 55.5 9.7 83 21-112 21-125 (338)
309 COG4982 3-oxoacyl-[acyl-carrie 98.0 8.3E-05 1.8E-09 58.4 9.8 95 20-114 392-504 (866)
310 TIGR03443 alpha_am_amid L-amin 98.0 5.4E-05 1.2E-09 64.9 9.7 90 23-115 970-1073(1389)
311 TIGR02356 adenyl_thiF thiazole 98.0 8.8E-05 1.9E-09 51.0 9.0 83 21-112 18-120 (202)
312 PRK12549 shikimate 5-dehydroge 98.0 9.1E-05 2E-09 53.6 9.1 51 21-72 124-175 (284)
313 COG2910 Putative NADH-flavin r 98.0 6.4E-05 1.4E-09 50.7 7.6 72 26-114 2-73 (211)
314 PF00899 ThiF: ThiF family; I 97.9 0.00034 7.4E-09 44.9 10.7 80 24-112 2-101 (135)
315 PRK06849 hypothetical protein; 97.9 0.00026 5.6E-09 53.3 11.1 83 23-112 3-85 (389)
316 COG0169 AroE Shikimate 5-dehyd 97.9 0.00012 2.7E-09 52.8 8.0 79 20-114 122-201 (283)
317 PRK14027 quinate/shikimate deh 97.8 0.00025 5.5E-09 51.2 9.6 81 21-114 124-205 (283)
318 PRK08762 molybdopterin biosynt 97.8 0.00021 4.6E-09 53.6 9.5 82 22-112 133-234 (376)
319 cd00757 ThiF_MoeB_HesA_family 97.8 0.00035 7.6E-09 48.9 10.0 83 21-112 18-120 (228)
320 PRK13940 glutamyl-tRNA reducta 97.8 0.00011 2.3E-09 55.9 7.8 77 20-115 177-254 (414)
321 TIGR01809 Shik-DH-AROM shikima 97.8 0.0002 4.4E-09 51.7 8.5 80 21-115 122-202 (282)
322 PRK05690 molybdopterin biosynt 97.8 0.00056 1.2E-08 48.5 10.6 83 21-112 29-131 (245)
323 PF04127 DFP: DNA / pantothena 97.8 0.00021 4.5E-09 48.5 8.0 77 22-114 1-93 (185)
324 cd08266 Zn_ADH_like1 Alcohol d 97.8 0.00042 9.2E-09 50.3 9.9 80 23-113 166-245 (342)
325 PRK07688 thiamine/molybdopteri 97.8 0.0004 8.7E-09 51.5 9.7 83 21-112 21-125 (339)
326 PLN02520 bifunctional 3-dehydr 97.8 7.6E-05 1.6E-09 58.4 6.2 47 21-68 376-422 (529)
327 PRK00258 aroE shikimate 5-dehy 97.7 0.00011 2.3E-09 53.0 6.4 76 21-114 120-196 (278)
328 cd01075 NAD_bind_Leu_Phe_Val_D 97.7 4.1E-05 8.9E-10 52.6 4.1 48 19-67 23-70 (200)
329 cd08295 double_bond_reductase_ 97.7 0.00029 6.3E-09 51.7 8.8 80 23-112 151-230 (338)
330 KOG1372 GDP-mannose 4,6 dehydr 97.7 7.6E-05 1.6E-09 52.7 5.3 87 23-114 27-117 (376)
331 COG3268 Uncharacterized conser 97.7 0.00012 2.7E-09 53.5 6.2 76 25-114 7-82 (382)
332 PRK08644 thiamine biosynthesis 97.7 0.00068 1.5E-08 47.0 9.7 81 22-111 26-125 (212)
333 TIGR00518 alaDH alanine dehydr 97.7 0.00079 1.7E-08 50.5 10.6 77 22-114 165-241 (370)
334 cd05276 p53_inducible_oxidored 97.7 0.00055 1.2E-08 49.1 9.5 80 23-113 139-218 (323)
335 cd01336 MDH_cytoplasmic_cytoso 97.7 7.4E-05 1.6E-09 55.0 5.0 79 26-116 4-91 (325)
336 COG0373 HemA Glutamyl-tRNA red 97.7 0.00057 1.2E-08 51.7 9.6 88 20-129 174-262 (414)
337 PRK05597 molybdopterin biosynt 97.7 0.00087 1.9E-08 50.0 10.5 83 21-112 25-127 (355)
338 cd08253 zeta_crystallin Zeta-c 97.7 0.00038 8.2E-09 50.0 8.4 80 23-113 144-223 (325)
339 cd01483 E1_enzyme_family Super 97.7 0.001 2.2E-08 43.1 9.6 78 27-113 2-99 (143)
340 cd08259 Zn_ADH5 Alcohol dehydr 97.7 0.00049 1.1E-08 50.0 9.0 41 23-63 162-202 (332)
341 cd08293 PTGR2 Prostaglandin re 97.7 0.00039 8.4E-09 51.0 8.5 78 25-113 156-234 (345)
342 KOG1431 GDP-L-fucose synthetas 97.7 0.00024 5.2E-09 49.6 6.7 80 25-132 2-87 (315)
343 cd01487 E1_ThiF_like E1_ThiF_l 97.7 0.0011 2.4E-08 44.6 9.8 77 27-112 2-97 (174)
344 PF00056 Ldh_1_N: lactate/mala 97.6 0.00034 7.4E-09 45.4 7.0 76 26-115 2-81 (141)
345 TIGR02825 B4_12hDH leukotriene 97.6 0.00045 9.8E-09 50.4 8.4 79 23-112 138-216 (325)
346 PF08643 DUF1776: Fungal famil 97.6 0.00034 7.3E-09 50.8 7.5 109 24-137 3-129 (299)
347 PRK09310 aroDE bifunctional 3- 97.6 0.00043 9.4E-09 53.5 8.6 47 20-67 328-374 (477)
348 PLN03154 putative allyl alcoho 97.6 0.0005 1.1E-08 50.9 8.6 80 23-112 158-237 (348)
349 COG0569 TrkA K+ transport syst 97.6 0.00074 1.6E-08 47.2 8.9 75 26-113 2-76 (225)
350 COG0604 Qor NADPH:quinone redu 97.6 0.00063 1.4E-08 50.1 8.8 77 24-113 143-221 (326)
351 TIGR02355 moeB molybdopterin s 97.6 0.0011 2.4E-08 46.8 9.6 83 21-112 21-123 (240)
352 PRK05600 thiamine biosynthesis 97.6 0.0014 2.9E-08 49.3 10.2 82 22-112 39-140 (370)
353 PRK00066 ldh L-lactate dehydro 97.5 0.0023 5E-08 47.0 10.9 80 21-115 3-85 (315)
354 PRK08223 hypothetical protein; 97.5 0.00096 2.1E-08 48.2 8.4 82 21-111 24-125 (287)
355 PTZ00325 malate dehydrogenase; 97.5 0.00024 5.1E-09 52.3 5.3 81 22-115 6-88 (321)
356 PLN00106 malate dehydrogenase 97.5 0.00022 4.8E-09 52.5 5.2 81 23-116 17-99 (323)
357 cd00755 YgdL_like Family of ac 97.5 0.0018 3.8E-08 45.6 9.5 83 22-112 9-111 (231)
358 cd01484 E1-2_like Ubiquitin ac 97.5 0.0019 4.1E-08 45.5 9.6 79 27-112 2-100 (234)
359 PRK12749 quinate/shikimate deh 97.5 0.001 2.2E-08 48.3 8.3 84 20-114 120-207 (288)
360 cd01489 Uba2_SUMO Ubiquitin ac 97.5 0.0013 2.8E-08 48.2 8.8 78 27-112 2-99 (312)
361 PRK08328 hypothetical protein; 97.5 0.0021 4.6E-08 45.1 9.7 82 22-112 25-127 (231)
362 TIGR02354 thiF_fam2 thiamine b 97.5 0.0021 4.5E-08 44.2 9.4 63 21-84 18-99 (200)
363 cd01492 Aos1_SUMO Ubiquitin ac 97.4 0.0018 4E-08 44.4 8.9 81 22-112 19-119 (197)
364 PRK15116 sulfur acceptor prote 97.4 0.0024 5.3E-08 45.8 9.7 85 21-113 27-131 (268)
365 KOG1198 Zinc-binding oxidoredu 97.4 0.0013 2.9E-08 48.9 8.5 80 22-113 156-235 (347)
366 cd05291 HicDH_like L-2-hydroxy 97.4 0.0031 6.8E-08 46.1 10.3 75 26-115 2-80 (306)
367 TIGR02853 spore_dpaA dipicolin 97.4 0.00084 1.8E-08 48.7 7.1 42 20-62 147-188 (287)
368 KOG1203 Predicted dehydrogenas 97.4 0.0024 5.1E-08 48.3 9.5 46 21-66 76-121 (411)
369 PRK00045 hemA glutamyl-tRNA re 97.4 0.0012 2.7E-08 50.3 8.1 47 21-68 179-226 (423)
370 cd01485 E1-1_like Ubiquitin ac 97.4 0.0038 8.3E-08 42.8 9.7 83 22-112 17-122 (198)
371 TIGR01035 hemA glutamyl-tRNA r 97.4 0.0021 4.6E-08 49.0 9.3 46 21-67 177-223 (417)
372 TIGR00715 precor6x_red precorr 97.4 0.0014 2.9E-08 46.8 7.6 74 26-113 2-75 (256)
373 cd05288 PGDH Prostaglandin deh 97.3 0.0028 6E-08 46.1 9.4 41 23-63 145-185 (329)
374 cd05188 MDR Medium chain reduc 97.3 0.0024 5.1E-08 44.8 8.8 79 22-113 133-211 (271)
375 PRK14192 bifunctional 5,10-met 97.3 0.0015 3.3E-08 47.2 7.6 39 19-57 154-192 (283)
376 cd05213 NAD_bind_Glutamyl_tRNA 97.3 0.0016 3.5E-08 47.7 7.8 46 22-68 176-222 (311)
377 PF02826 2-Hacid_dh_C: D-isome 97.3 0.0028 6.1E-08 42.6 8.4 66 17-86 29-103 (178)
378 TIGR01381 E1_like_apg7 E1-like 97.3 0.0022 4.8E-08 51.0 8.9 62 22-84 336-420 (664)
379 cd08294 leukotriene_B4_DH_like 97.3 0.0017 3.6E-08 47.2 7.8 41 23-63 143-183 (329)
380 cd01080 NAD_bind_m-THF_DH_Cycl 97.3 0.0012 2.6E-08 44.1 6.3 43 20-62 40-82 (168)
381 TIGR02824 quinone_pig3 putativ 97.3 0.0035 7.7E-08 45.0 9.2 79 23-112 139-217 (325)
382 PRK07411 hypothetical protein; 97.3 0.0033 7.1E-08 47.6 9.1 82 22-112 36-137 (390)
383 PRK09424 pntA NAD(P) transhydr 97.3 0.0065 1.4E-07 47.4 10.8 85 22-115 163-260 (509)
384 PLN00203 glutamyl-tRNA reducta 97.3 0.0029 6.2E-08 49.5 8.9 89 21-128 263-352 (519)
385 PRK15469 ghrA bifunctional gly 97.3 0.0057 1.2E-07 44.9 10.0 105 20-131 132-242 (312)
386 cd01488 Uba3_RUB Ubiquitin act 97.2 0.0041 8.9E-08 45.2 9.0 76 27-112 2-97 (291)
387 KOG2774 NAD dependent epimeras 97.2 0.00017 3.6E-09 50.7 1.7 80 21-115 41-122 (366)
388 PRK12480 D-lactate dehydrogena 97.2 0.011 2.3E-07 43.9 11.2 91 20-114 142-236 (330)
389 PRK07878 molybdopterin biosynt 97.2 0.006 1.3E-07 46.2 10.0 82 22-112 40-141 (392)
390 cd08268 MDR2 Medium chain dehy 97.2 0.0043 9.2E-08 44.7 8.9 41 23-63 144-184 (328)
391 PRK09880 L-idonate 5-dehydroge 97.2 0.0042 9.1E-08 45.8 8.9 76 23-113 169-245 (343)
392 PRK14851 hypothetical protein; 97.2 0.0059 1.3E-07 49.3 10.0 83 21-112 40-142 (679)
393 PF02254 TrkA_N: TrkA-N domain 97.2 0.0024 5.2E-08 39.6 6.4 71 27-112 1-71 (116)
394 PRK09496 trkA potassium transp 97.2 0.0023 5E-08 48.9 7.5 57 26-90 2-58 (453)
395 cd01486 Apg7 Apg7 is an E1-lik 97.2 0.0038 8.2E-08 45.5 8.1 58 26-84 1-80 (307)
396 PF00670 AdoHcyase_NAD: S-aden 97.1 0.0057 1.2E-07 40.6 8.2 44 19-63 18-61 (162)
397 COG1064 AdhP Zn-dependent alco 97.1 0.0065 1.4E-07 45.0 9.1 42 23-65 166-207 (339)
398 PRK13243 glyoxylate reductase; 97.1 0.0096 2.1E-07 44.1 9.9 90 20-113 146-241 (333)
399 PLN02819 lysine-ketoglutarate 97.1 0.0038 8.1E-08 52.5 8.4 77 23-113 568-658 (1042)
400 PRK06487 glycerate dehydrogena 97.1 0.0039 8.5E-08 45.8 7.8 91 20-114 144-235 (317)
401 cd00704 MDH Malate dehydrogena 97.1 0.0025 5.4E-08 47.0 6.7 78 26-116 2-89 (323)
402 PRK08306 dipicolinate synthase 97.1 0.0069 1.5E-07 44.1 8.8 40 20-60 148-187 (296)
403 TIGR01470 cysG_Nterm siroheme 97.0 0.01 2.3E-07 40.9 9.0 40 19-59 4-43 (205)
404 COG3007 Uncharacterized paraqu 97.0 0.013 2.8E-07 42.6 9.5 90 23-114 40-142 (398)
405 cd08250 Mgc45594_like Mgc45594 97.0 0.0077 1.7E-07 43.8 8.8 41 23-63 139-179 (329)
406 cd08244 MDR_enoyl_red Possible 97.0 0.0079 1.7E-07 43.5 8.8 80 23-113 142-221 (324)
407 cd05212 NAD_bind_m-THF_DH_Cycl 97.0 0.0041 8.9E-08 40.4 6.4 44 20-63 24-67 (140)
408 cd00650 LDH_MDH_like NAD-depen 97.0 0.0022 4.9E-08 45.8 5.7 78 27-115 1-82 (263)
409 TIGR02818 adh_III_F_hyde S-(hy 97.0 0.012 2.5E-07 44.0 9.6 78 23-112 185-264 (368)
410 PF03446 NAD_binding_2: NAD bi 97.0 0.017 3.6E-07 38.3 9.4 88 25-113 2-96 (163)
411 TIGR03201 dearomat_had 6-hydro 97.0 0.013 2.7E-07 43.4 9.7 40 23-63 166-205 (349)
412 PRK13982 bifunctional SbtC-lik 97.0 0.007 1.5E-07 46.8 8.4 77 21-114 253-345 (475)
413 PLN02928 oxidoreductase family 97.0 0.0088 1.9E-07 44.6 8.7 38 20-58 155-192 (347)
414 cd08243 quinone_oxidoreductase 96.9 0.011 2.5E-07 42.4 9.2 41 23-63 142-182 (320)
415 PLN02740 Alcohol dehydrogenase 96.9 0.011 2.3E-07 44.4 9.2 79 23-113 198-278 (381)
416 cd08289 MDR_yhfp_like Yhfp put 96.9 0.0076 1.7E-07 43.7 8.2 42 23-64 146-187 (326)
417 PRK04148 hypothetical protein; 96.9 0.0029 6.4E-08 40.7 5.1 54 23-86 16-69 (134)
418 PRK14852 hypothetical protein; 96.9 0.012 2.6E-07 49.1 9.8 82 22-112 330-431 (989)
419 PLN03139 formate dehydrogenase 96.9 0.023 5E-07 43.0 10.6 91 19-113 194-292 (386)
420 cd08239 THR_DH_like L-threonin 96.9 0.0077 1.7E-07 44.2 8.1 78 23-113 163-241 (339)
421 PRK08655 prephenate dehydrogen 96.9 0.019 4.1E-07 44.1 10.3 38 26-63 2-39 (437)
422 cd08300 alcohol_DH_class_III c 96.9 0.014 3E-07 43.5 9.4 78 23-112 186-265 (368)
423 cd08292 ETR_like_2 2-enoyl thi 96.9 0.0078 1.7E-07 43.6 7.9 41 23-63 139-179 (324)
424 PLN02602 lactate dehydrogenase 96.9 0.02 4.3E-07 42.8 10.0 77 25-115 38-117 (350)
425 KOG0747 Putative NAD+-dependen 96.9 0.0014 3E-08 47.2 3.7 84 24-114 6-91 (331)
426 PRK09496 trkA potassium transp 96.9 0.0084 1.8E-07 45.9 8.3 62 22-90 229-290 (453)
427 PRK05086 malate dehydrogenase; 96.9 0.017 3.6E-07 42.5 9.5 35 25-59 1-38 (312)
428 cd05286 QOR2 Quinone oxidoredu 96.9 0.0074 1.6E-07 43.2 7.6 42 23-64 136-177 (320)
429 cd08241 QOR1 Quinone oxidoredu 96.9 0.0087 1.9E-07 42.9 8.0 41 23-63 139-179 (323)
430 TIGR01915 npdG NADPH-dependent 96.9 0.0043 9.4E-08 43.1 6.1 42 26-67 2-43 (219)
431 PTZ00354 alcohol dehydrogenase 96.8 0.021 4.6E-07 41.4 9.9 42 23-64 140-181 (334)
432 cd01491 Ube1_repeat1 Ubiquitin 96.8 0.0088 1.9E-07 43.4 7.7 62 21-83 16-97 (286)
433 PLN02586 probable cinnamyl alc 96.8 0.016 3.5E-07 43.1 9.4 41 23-64 183-223 (360)
434 cd08301 alcohol_DH_plants Plan 96.8 0.018 3.8E-07 42.9 9.6 78 23-112 187-266 (369)
435 cd05282 ETR_like 2-enoyl thioe 96.8 0.0097 2.1E-07 43.0 8.0 41 23-63 138-178 (323)
436 COG2130 Putative NADP-dependen 96.8 0.0039 8.4E-08 45.4 5.6 81 22-113 149-229 (340)
437 TIGR00561 pntA NAD(P) transhyd 96.8 0.041 8.9E-07 43.1 11.6 85 21-114 161-258 (511)
438 PF12242 Eno-Rase_NADH_b: NAD( 96.8 0.0027 6E-08 36.6 3.9 34 23-57 37-73 (78)
439 PF02737 3HCDH_N: 3-hydroxyacy 96.8 0.0054 1.2E-07 41.4 6.0 41 26-67 1-41 (180)
440 PRK07574 formate dehydrogenase 96.8 0.022 4.8E-07 43.1 9.8 105 20-131 188-300 (385)
441 PRK06718 precorrin-2 dehydroge 96.8 0.0026 5.7E-08 43.8 4.6 39 19-58 5-43 (202)
442 PF01113 DapB_N: Dihydrodipico 96.8 0.03 6.4E-07 35.5 8.9 80 26-113 2-101 (124)
443 TIGR01758 MDH_euk_cyt malate d 96.8 0.0061 1.3E-07 45.0 6.5 74 26-115 1-87 (324)
444 PRK06719 precorrin-2 dehydroge 96.8 0.0041 8.8E-08 41.1 5.1 37 19-56 8-44 (157)
445 KOG2013 SMT3/SUMO-activating c 96.7 0.01 2.2E-07 45.7 7.6 66 23-89 11-96 (603)
446 cd08297 CAD3 Cinnamyl alcohol 96.7 0.015 3.3E-07 42.6 8.6 41 23-63 165-205 (341)
447 PRK04308 murD UDP-N-acetylmura 96.7 0.021 4.5E-07 43.8 9.5 77 21-114 2-78 (445)
448 PTZ00082 L-lactate dehydrogena 96.7 0.032 6.9E-07 41.2 10.1 40 22-62 4-44 (321)
449 cd05293 LDH_1 A subgroup of L- 96.7 0.033 7.1E-07 41.0 10.0 77 25-115 4-83 (312)
450 PRK08410 2-hydroxyacid dehydro 96.7 0.012 2.6E-07 43.2 7.7 104 20-130 141-247 (311)
451 cd05191 NAD_bind_amino_acid_DH 96.7 0.015 3.3E-07 34.3 6.9 36 20-56 19-55 (86)
452 PRK12550 shikimate 5-dehydroge 96.7 0.0059 1.3E-07 44.0 5.9 43 24-67 122-165 (272)
453 PF13241 NAD_binding_7: Putati 96.7 0.0018 3.9E-08 39.7 2.8 38 20-58 3-40 (103)
454 PRK01438 murD UDP-N-acetylmura 96.7 0.032 7E-07 43.2 10.3 76 21-114 13-89 (480)
455 cd08246 crotonyl_coA_red croto 96.7 0.028 6E-07 42.2 9.7 41 23-63 193-233 (393)
456 PRK14175 bifunctional 5,10-met 96.7 0.009 2E-07 43.3 6.7 40 20-59 154-193 (286)
457 cd08238 sorbose_phosphate_red 96.7 0.023 4.9E-07 43.1 9.2 43 23-65 175-220 (410)
458 cd08290 ETR 2-enoyl thioester 96.7 0.026 5.6E-07 41.3 9.3 37 23-59 146-182 (341)
459 KOG0024 Sorbitol dehydrogenase 96.7 0.04 8.7E-07 40.6 9.9 83 23-113 169-252 (354)
460 PRK07877 hypothetical protein; 96.6 0.017 3.6E-07 47.0 8.7 81 22-112 105-205 (722)
461 COG5322 Predicted dehydrogenas 96.6 0.005 1.1E-07 44.1 5.1 48 18-65 161-208 (351)
462 cd08230 glucose_DH Glucose deh 96.6 0.018 4E-07 42.6 8.3 34 23-57 172-205 (355)
463 PRK14194 bifunctional 5,10-met 96.6 0.0086 1.9E-07 43.7 6.2 44 20-63 155-198 (301)
464 cd08248 RTN4I1 Human Reticulon 96.6 0.042 9.1E-07 40.3 10.0 35 23-57 162-196 (350)
465 PF02882 THF_DHG_CYH_C: Tetrah 96.6 0.0081 1.7E-07 39.9 5.4 44 20-63 32-75 (160)
466 PRK06932 glycerate dehydrogena 96.5 0.015 3.1E-07 42.8 7.2 91 20-114 143-235 (314)
467 PLN02827 Alcohol dehydrogenase 96.5 0.036 7.9E-07 41.6 9.4 79 23-113 193-273 (378)
468 PTZ00117 malate dehydrogenase; 96.5 0.038 8.2E-07 40.7 9.3 43 23-66 4-47 (319)
469 KOG0023 Alcohol dehydrogenase, 96.5 0.064 1.4E-06 39.5 10.1 76 23-110 181-257 (360)
470 PLN02178 cinnamyl-alcohol dehy 96.5 0.025 5.3E-07 42.5 8.4 37 23-60 178-214 (375)
471 cd08291 ETR_like_1 2-enoyl thi 96.5 0.024 5.2E-07 41.3 8.2 42 23-64 142-184 (324)
472 PF03808 Glyco_tran_WecB: Glyc 96.5 0.058 1.3E-06 36.1 9.3 74 38-113 38-111 (172)
473 cd08281 liver_ADH_like1 Zinc-d 96.5 0.036 7.7E-07 41.4 9.0 78 23-113 191-269 (371)
474 PRK05479 ketol-acid reductoiso 96.5 0.064 1.4E-06 39.8 10.1 90 21-114 14-111 (330)
475 cd08231 MDR_TM0436_like Hypoth 96.5 0.046 1E-06 40.4 9.6 39 23-62 177-216 (361)
476 TIGR03451 mycoS_dep_FDH mycoth 96.4 0.023 5.1E-07 42.1 7.9 40 23-63 176-216 (358)
477 TIGR02817 adh_fam_1 zinc-bindi 96.4 0.042 9.1E-07 40.1 9.1 41 24-64 149-190 (336)
478 cd08233 butanediol_DH_like (2R 96.4 0.026 5.7E-07 41.6 8.1 78 23-112 172-250 (351)
479 COG0039 Mdh Malate/lactate deh 96.4 0.022 4.7E-07 41.8 7.3 80 26-118 2-84 (313)
480 PRK06223 malate dehydrogenase; 96.4 0.049 1.1E-06 39.7 9.2 43 25-68 3-46 (307)
481 PRK10669 putative cation:proto 96.4 0.014 2.9E-07 46.2 6.7 58 25-91 418-475 (558)
482 cd01490 Ube1_repeat2 Ubiquitin 96.4 0.042 9E-07 42.2 9.0 80 27-111 2-106 (435)
483 PLN02306 hydroxypyruvate reduc 96.4 0.041 9E-07 41.6 8.9 105 20-131 161-288 (386)
484 TIGR01751 crot-CoA-red crotony 96.4 0.041 8.9E-07 41.5 9.0 40 23-62 189-228 (398)
485 cd08274 MDR9 Medium chain dehy 96.4 0.045 9.7E-07 40.2 9.0 36 23-58 177-212 (350)
486 cd08260 Zn_ADH6 Alcohol dehydr 96.4 0.065 1.4E-06 39.3 9.8 41 23-64 165-205 (345)
487 PF03807 F420_oxidored: NADP o 96.4 0.014 3.1E-07 34.8 5.3 41 27-68 2-46 (96)
488 cd08277 liver_alcohol_DH_like 96.4 0.044 9.5E-07 40.8 9.0 78 23-112 184-263 (365)
489 cd05280 MDR_yhdh_yhfp Yhdh and 96.3 0.039 8.5E-07 39.9 8.5 40 24-63 147-186 (325)
490 cd08296 CAD_like Cinnamyl alco 96.3 0.049 1.1E-06 39.9 9.1 40 23-63 163-202 (333)
491 PRK15409 bifunctional glyoxyla 96.3 0.057 1.2E-06 39.9 9.4 106 20-132 141-253 (323)
492 cd05290 LDH_3 A subgroup of L- 96.3 0.11 2.4E-06 38.1 10.8 74 27-115 2-80 (307)
493 PRK13771 putative alcohol dehy 96.3 0.047 1E-06 39.8 9.0 41 23-63 162-202 (334)
494 PRK13403 ketol-acid reductoiso 96.3 0.091 2E-06 38.9 10.2 90 21-114 13-109 (335)
495 PRK10754 quinone oxidoreductas 96.3 0.029 6.2E-07 40.8 7.7 41 23-63 140-180 (327)
496 PRK08293 3-hydroxybutyryl-CoA 96.3 0.18 3.8E-06 36.5 11.7 40 25-65 4-43 (287)
497 PRK14191 bifunctional 5,10-met 96.3 0.021 4.5E-07 41.4 6.7 39 20-58 153-191 (285)
498 KOG4039 Serine/threonine kinas 96.3 0.013 2.9E-07 39.6 5.3 79 20-114 14-94 (238)
499 PRK09288 purT phosphoribosylgl 96.3 0.071 1.5E-06 40.1 9.8 74 23-112 11-84 (395)
500 cd01338 MDH_choloroplast_like 96.3 0.0086 1.9E-07 44.2 4.7 77 25-115 3-90 (322)
No 1
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.96 E-value=3.1e-28 Score=167.62 Aligned_cols=114 Identities=28% Similarity=0.334 Sum_probs=104.5
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+.+|+++||||++|||.++|+.|+++|++|++++|..++++++..++.. ..+..+.+|++|.++++++++.+.++
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~ 78 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEE 78 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHh
Confidence 46689999999999999999999999999999999999999999888742 57899999999999999999999999
Q ss_pred CCCccEEEECcccC--CCCCccCHHHHHHHhhhccccccC
Q 042455 101 ALPLNILINKAGIC--GTPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 101 ~~~id~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
+++||+||||||+. .+..+.+.++|++++++|+.|.++
T Consensus 79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~ 118 (246)
T COG4221 79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLN 118 (246)
T ss_pred hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999987 355678999999999999998763
No 2
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.95 E-value=6.2e-27 Score=164.66 Aligned_cols=116 Identities=32% Similarity=0.453 Sum_probs=108.4
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+.+++++||||++|||+++|+.|+++|++|+++.|++++++++.++++..+ +.++..+++|++++++++++.+++..+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhc
Confidence 4678999999999999999999999999999999999999999999998876 688999999999999999999999999
Q ss_pred CCCccEEEECcccC--CCCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGIC--GTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+.||+||||||.. +++.+.++++.+++|++|+.+++
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~ 120 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALT 120 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHH
Confidence 89999999999987 46778999999999999998764
No 3
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.95 E-value=4e-27 Score=166.74 Aligned_cols=119 Identities=29% Similarity=0.312 Sum_probs=107.5
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
+..+.||+++||||++|||.++|++|++.|++++++.|..++++...+++++..+..+++.++||++|.++++++++++.
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI 86 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999988888877754569999999999999999999999
Q ss_pred hcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++|++|+||||||+.. .....+.+++..+|++|++|+.
T Consensus 87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V 127 (282)
T KOG1205|consen 87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTV 127 (282)
T ss_pred HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhH
Confidence 99999999999999885 2335788899999999999975
No 4
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=7.9e-26 Score=163.52 Aligned_cols=122 Identities=54% Similarity=0.818 Sum_probs=114.0
Q ss_pred ccCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH
Q 042455 17 TQGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASD 96 (138)
Q Consensus 17 ~~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 96 (138)
....++++++++|||+++|||+++|+.|+.+|++|++.+|+.++.++...++....+..++.++++|+++.+++.++.++
T Consensus 28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence 44567889999999999999999999999999999999999999999999998866678899999999999999999999
Q ss_pred HHhcCCCccEEEECcccCCCCCccCHHHHHHHhhhccccccC
Q 042455 97 FTARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 97 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
+.+.++++|++|||||++.++...+.|.++..|.+|+.|+|+
T Consensus 108 ~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~fl 149 (314)
T KOG1208|consen 108 FKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFL 149 (314)
T ss_pred HHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHH
Confidence 999999999999999999888888999999999999999874
No 5
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=2.3e-25 Score=157.19 Aligned_cols=118 Identities=22% Similarity=0.344 Sum_probs=108.8
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+..+.+|+++|||||++|||+++|.+++++|+++++.+.|.+..++..++++.. ++++.+.||+++.+++.+..+++
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~---g~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI---GEAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc---CceeEEEecCCCHHHHHHHHHHH
Confidence 455789999999999999999999999999999999999999999988888765 38999999999999999999999
Q ss_pred HhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhccccccC
Q 042455 98 TARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
+++.|.+|+||||||+.. +..+.+.+++++.|++|+.|+|+
T Consensus 109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~ 151 (300)
T KOG1201|consen 109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFW 151 (300)
T ss_pred HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHH
Confidence 999999999999999984 56789999999999999999873
No 6
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.93 E-value=6.5e-25 Score=159.53 Aligned_cols=118 Identities=43% Similarity=0.606 Sum_probs=106.2
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.++++|+++||||++|||+++|+.|+++|++|++++|+.++.++..+++....++.++.++.+|++|.++++++++++.+
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999998888888887665556789999999999999999999999
Q ss_pred cCCCccEEEECcccCCC-CCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICGT-PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|+||||||...+ ..+.+.++|+.+|++|+.|+|
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~ 128 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHF 128 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHH
Confidence 99999999999998754 335788999999999999876
No 7
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.92 E-value=3.6e-24 Score=152.52 Aligned_cols=120 Identities=29% Similarity=0.336 Sum_probs=106.5
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcC-CCCeeEEEEecCCCHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQN-PAAKVDVMELDLSSLASVRKFASD 96 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 96 (138)
++..+.+|+++|||+++|||+++|++|++.|++|++++|+++..++....+.... .+.++..+.||+++.+++++++++
T Consensus 2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~ 81 (270)
T KOG0725|consen 2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF 81 (270)
T ss_pred CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence 3456899999999999999999999999999999999999999888777766543 245799999999999999999999
Q ss_pred HHhc-CCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 97 FTAR-ALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 97 ~~~~-~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
..++ +|+||+||||||... +..+.++|+|++++++|+.|.+
T Consensus 82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~ 126 (270)
T KOG0725|consen 82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSA 126 (270)
T ss_pred HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHH
Confidence 9988 799999999999874 4568999999999999999743
No 8
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.92 E-value=6e-24 Score=150.72 Aligned_cols=119 Identities=26% Similarity=0.295 Sum_probs=105.9
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
..++++|+++||||++|||+++++.|+++|++|++++|+.+++++..+++...+++.++..+.+|++|.+++.++++++.
T Consensus 3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999998888877777766555678899999999999999999999
Q ss_pred hcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.++++|++|||||... +..+.+.++|.+.+++|+.+++
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 123 (265)
T PRK07062 83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVI 123 (265)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 99999999999999763 4457888999999999998865
No 9
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.91 E-value=7.7e-24 Score=149.55 Aligned_cols=113 Identities=15% Similarity=0.131 Sum_probs=95.9
Q ss_pred CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGAS--SGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 20 ~~~~~k~~litG~~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
..+++|+++||||+ +|||+++|++|+++|++|++++|+. +.++..+++. ...+.++++|++|+++++++++++
T Consensus 3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~ 77 (252)
T PRK06079 3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATI 77 (252)
T ss_pred cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHH
Confidence 34789999999999 7999999999999999999999983 4443333332 235788999999999999999999
Q ss_pred HhcCCCccEEEECcccCC------CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG------TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++++|+||||||... +..+.+.++|++.+++|+.+++
T Consensus 78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~ 123 (252)
T PRK06079 78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLI 123 (252)
T ss_pred HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHH
Confidence 999999999999999753 3457889999999999999876
No 10
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.1e-23 Score=148.47 Aligned_cols=116 Identities=28% Similarity=0.336 Sum_probs=103.4
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++++|+++|||+++|||.++++.|+++|++|++++|++++.++...++... +.++.++.+|++++++++++++++.+
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVE 79 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3577899999999999999999999999999999999988888877777654 45788899999999999999999999
Q ss_pred cCCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++++|++|||||... +..+.+.++|++++++|+.+++
T Consensus 80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~ 120 (254)
T PRK07478 80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAF 120 (254)
T ss_pred hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 9999999999999753 3457889999999999998876
No 11
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.3e-23 Score=149.22 Aligned_cols=116 Identities=23% Similarity=0.241 Sum_probs=101.4
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++++|+++|||+++|||+++|+.|+++|++|++++|+.+.+++..+++.... +.++.++.+|++|+++++++++++.
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~- 81 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK- 81 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-
Confidence 35789999999999999999999999999999999999888877777665443 4568899999999999999999985
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 121 (263)
T PRK08339 82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAV 121 (263)
T ss_pred hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH
Confidence 5899999999999763 3457899999999999999876
No 12
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.2e-23 Score=148.31 Aligned_cols=116 Identities=27% Similarity=0.318 Sum_probs=103.5
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++++|+++|||+++|||.+++++|+++|++|++++|+.+..++...++... +.++..+.+|++++++++++++++.+
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTA 82 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999988888777777654 45788899999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (253)
T PRK05867 83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVF 122 (253)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHH
Confidence 9999999999999763 4456889999999999999876
No 13
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.3e-23 Score=153.65 Aligned_cols=116 Identities=25% Similarity=0.314 Sum_probs=104.3
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+.+.+|+++|||+++|||++++++|+++|++|++++|+++.+++...++... +.++.++.+|++|.++++++++++.+
T Consensus 3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAAS 80 (330)
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999998888877777654 56788899999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||||+.. +..+.+.++|++++++|+.|++
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~ 120 (330)
T PRK06139 81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYM 120 (330)
T ss_pred hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHH
Confidence 8899999999999863 4567889999999999999875
No 14
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.4e-23 Score=149.96 Aligned_cols=115 Identities=21% Similarity=0.284 Sum_probs=103.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+++|+++|||+++|||+++|++|+++|++|++++|+.+.+++..+++... +.++.++.+|++|.+++.++++++.++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRL 80 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999988888777777544 457888999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|+||||||+.. +..+.+.++|++++++|+.|++
T Consensus 81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~ 119 (275)
T PRK05876 81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSI 119 (275)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHH
Confidence 999999999999863 4557899999999999999875
No 15
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.91 E-value=1.2e-23 Score=149.09 Aligned_cols=120 Identities=13% Similarity=0.111 Sum_probs=97.7
Q ss_pred hccCCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHH
Q 042455 16 VTQGIDAAGVTAIVTGAS--SGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKF 93 (138)
Q Consensus 16 ~~~~~~~~~k~~litG~~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~ 93 (138)
|.+.+++++|+++||||+ +|||+++|++|+++|++|++++|+.+..+ ...++.... ..+.++++|++|+++++++
T Consensus 2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~--~~~~~~~~D~~~~~~v~~~ 78 (258)
T PRK07533 2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEEL--DAPIFLPLDVREPGQLEAV 78 (258)
T ss_pred CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhh--ccceEEecCcCCHHHHHHH
Confidence 456667899999999998 59999999999999999999999864322 223333222 2346789999999999999
Q ss_pred HHHHHhcCCCccEEEECcccCC------CCCccCHHHHHHHhhhccccccC
Q 042455 94 ASDFTARALPLNILINKAGICG------TPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 94 ~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
++++.++++++|++|||||... +..+.+.++|+++|++|+.|+++
T Consensus 79 ~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~ 129 (258)
T PRK07533 79 FARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIR 129 (258)
T ss_pred HHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHH
Confidence 9999999999999999999753 23467899999999999998763
No 16
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.91 E-value=2.3e-23 Score=147.41 Aligned_cols=117 Identities=32% Similarity=0.440 Sum_probs=103.9
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+++|+++|||+++|||+++++.|+++|++|++++|+++..++...++.....+.++.++++|+++++++.++++++.++
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999998888887777765333567889999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||||... +..+.+.++|++++++|+.+++
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAW 122 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHH
Confidence 999999999999753 4456788999999999999876
No 17
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.91 E-value=2.5e-23 Score=148.77 Aligned_cols=115 Identities=13% Similarity=0.169 Sum_probs=94.7
Q ss_pred CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGAS--SGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 21 ~~~~k~~litG~~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
.|.+|+++||||+ +|||+++|+.|+++|++|++++|+.+ .++..+++.... +.. ..+++|++|.++++++++++.
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~-~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQEL-GSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhc-CCc-eEEEecCCCHHHHHHHHHHHH
Confidence 4679999999997 79999999999999999999999853 222333333322 223 578999999999999999999
Q ss_pred hcCCCccEEEECcccCC------CCCccCHHHHHHHhhhccccccC
Q 042455 99 ARALPLNILINKAGICG------TPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
+++|++|+||||||+.. +..+.+.++|+++|++|+.|+++
T Consensus 79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~ 124 (274)
T PRK08415 79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIE 124 (274)
T ss_pred HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHH
Confidence 99999999999999752 34578899999999999999863
No 18
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.91 E-value=3.1e-23 Score=146.36 Aligned_cols=114 Identities=22% Similarity=0.297 Sum_probs=97.2
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++++|+++||||++|||+++|++|+++|++|++++|+.. ++....+... +.++.++.+|++++++++++++++.+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVE 79 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999988643 2333334333 46788999999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||||... +..+.+.++|++++++|+.+++
T Consensus 80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~ 119 (251)
T PRK12481 80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVF 119 (251)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHH
Confidence 9999999999999863 3457889999999999999876
No 19
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.6e-23 Score=151.59 Aligned_cols=119 Identities=45% Similarity=0.651 Sum_probs=104.7
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
+.++++|+++||||++|||+++|++|+++|++|++++|+.++.++...++....++.++.++.+|++|.++++++++++.
T Consensus 11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999988877776666654445678899999999999999999999
Q ss_pred hcCCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++++|+||||||...+....+.++|+..|++|+.|++
T Consensus 91 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~ 129 (306)
T PRK06197 91 AAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHF 129 (306)
T ss_pred hhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHH
Confidence 999999999999998765556777889999999999865
No 20
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.91 E-value=3.1e-23 Score=150.33 Aligned_cols=116 Identities=18% Similarity=0.156 Sum_probs=98.1
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCc----------chhHHHHHHHHhcCCCCeeEEEEecCCCHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNM----------AAGRDVKVAIVMQNPAAKVDVMELDLSSLAS 89 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~ 89 (138)
.++++|+++||||++|||+++|+.|+++|++|++++|+. +..++..+.+... +.++.++++|++++++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~ 81 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPEQ 81 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHH
Confidence 457899999999999999999999999999999999974 3445555555443 4567889999999999
Q ss_pred HHHHHHHHHhcCCCccEEEECc-ccC------CCCCccCHHHHHHHhhhcccccc
Q 042455 90 VRKFASDFTARALPLNILINKA-GIC------GTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 90 ~~~~~~~~~~~~~~id~lv~~a-g~~------~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++++++.+++|+||+||||| |.. .+..+.+.++|.+++++|+.++|
T Consensus 82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 136 (305)
T PRK08303 82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHL 136 (305)
T ss_pred HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHH
Confidence 9999999999999999999999 752 23446788999999999998876
No 21
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.91 E-value=3.8e-23 Score=148.52 Aligned_cols=115 Identities=24% Similarity=0.305 Sum_probs=100.7
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCc---------chhHHHHHHHHhcCCCCeeEEEEecCCCHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNM---------AAGRDVKVAIVMQNPAAKVDVMELDLSSLASVR 91 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~ 91 (138)
.+++|+++||||++|||+++|+.|+++|++|++++++. +.+++..+++... +.++.++.+|++|++++.
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~ 80 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAA 80 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHH
Confidence 36799999999999999999999999999999998875 5566666666544 457888999999999999
Q ss_pred HHHHHHHhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 92 KFASDFTARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 92 ~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++++.++++++|++|||||+.. +..+.+.++|++++++|+.|+|
T Consensus 81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~ 128 (286)
T PRK07791 81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHF 128 (286)
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHH
Confidence 999999999999999999999864 3457899999999999999876
No 22
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.90 E-value=3.2e-23 Score=147.93 Aligned_cols=115 Identities=14% Similarity=0.169 Sum_probs=94.7
Q ss_pred CCCCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASS--GIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 20 ~~~~~k~~litG~~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
..|++|++||||+++ |||+++|+.|+++|++|++++|+....+. .+++.... +. ..++++|++|.++++++++++
T Consensus 3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~-g~-~~~~~~Dv~d~~~v~~~~~~~ 79 (271)
T PRK06505 3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESL-GS-DFVLPCDVEDIASVDAVFEAL 79 (271)
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhc-CC-ceEEeCCCCCHHHHHHHHHHH
Confidence 347899999999996 99999999999999999999987543333 33333222 22 357899999999999999999
Q ss_pred HhcCCCccEEEECcccCC------CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG------TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+++|++|+||||||+.. +..+.+.++|++++++|+.+++
T Consensus 80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~ 125 (271)
T PRK06505 80 EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFT 125 (271)
T ss_pred HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHH
Confidence 999999999999999763 3346889999999999999876
No 23
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.90 E-value=4.3e-23 Score=146.24 Aligned_cols=117 Identities=14% Similarity=0.091 Sum_probs=97.0
Q ss_pred CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEecCcc--hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGAS--SGIGAETTRVLALRGVHVIMADRNMA--AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFAS 95 (138)
Q Consensus 20 ~~~~~k~~litG~~--~~iG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 95 (138)
+++++|+++|||++ +|||+++|++|+++|++|++++++.+ +.++..+++... ..++.++++|++|+++++++++
T Consensus 2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~ 79 (258)
T PRK07370 2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFE 79 (258)
T ss_pred cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHH
Confidence 35789999999986 89999999999999999998877644 334445555443 2346788999999999999999
Q ss_pred HHHhcCCCccEEEECcccCC------CCCccCHHHHHHHhhhccccccC
Q 042455 96 DFTARALPLNILINKAGICG------TPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 96 ~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
++.++++++|+||||||+.. +..+.+.++|+++|++|+.|+++
T Consensus 80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~ 128 (258)
T PRK07370 80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAP 128 (258)
T ss_pred HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHH
Confidence 99999999999999999752 34577899999999999998763
No 24
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.90 E-value=6e-23 Score=144.78 Aligned_cols=117 Identities=21% Similarity=0.261 Sum_probs=103.6
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
.+++.+|++|||||+++||++++++|+++|++|++++|+.++.++...++... +.++..+.+|++|+++++++++++.
T Consensus 4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (254)
T PRK08085 4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIE 81 (254)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999988877777777544 4567889999999999999999999
Q ss_pred hcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 82 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (254)
T PRK08085 82 KDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVF 122 (254)
T ss_pred HhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 99999999999999763 4557889999999999999875
No 25
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.90 E-value=8.7e-23 Score=142.35 Aligned_cols=115 Identities=17% Similarity=0.139 Sum_probs=101.4
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++... +.++..+.+|++++++++++++++.++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999998888877777654 456788899999999999999999999
Q ss_pred CC-CccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 101 AL-PLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~-~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++ +||++|||+|... +..+.+.++|.+.+++|+.++|
T Consensus 80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (227)
T PRK08862 80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLF 120 (227)
T ss_pred hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHH
Confidence 98 9999999998542 3456788999999999988765
No 26
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.90 E-value=7e-23 Score=150.11 Aligned_cols=116 Identities=20% Similarity=0.266 Sum_probs=104.0
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
..+++|+++||||++|||+++++.|+++|++|++++|+++.+++...++... +.++.++.+|++|.++++++++++.+
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~ 81 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEE 81 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3477899999999999999999999999999999999988888877777654 56788999999999999999999999
Q ss_pred cCCCccEEEECcccC--CCCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGIC--GTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++++|++|||+|.. ++..+.+.++|++++++|+.|++
T Consensus 82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~ 121 (334)
T PRK07109 82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVV 121 (334)
T ss_pred HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHH
Confidence 999999999999975 34567899999999999998875
No 27
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.90 E-value=4.3e-23 Score=146.06 Aligned_cols=113 Identities=15% Similarity=0.185 Sum_probs=94.5
Q ss_pred CCCCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEecCc--chhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGA--SSGIGAETTRVLALRGVHVIMADRNM--AAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFAS 95 (138)
Q Consensus 20 ~~~~~k~~litG~--~~~iG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 95 (138)
..+++|+++|||+ ++|||+++|+.|+++|++|++++|+. +..++...++ +.++.++++|++|+++++++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~~~ 77 (256)
T PRK07889 3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-----PEPAPVLELDVTNEEHLASLAD 77 (256)
T ss_pred ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-----CCCCcEEeCCCCCHHHHHHHHH
Confidence 3478999999999 89999999999999999999999864 2233333322 2357789999999999999999
Q ss_pred HHHhcCCCccEEEECcccCC------CCCccCHHHHHHHhhhcccccc
Q 042455 96 DFTARALPLNILINKAGICG------TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 96 ~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++.++++++|++|||||+.. +..+.+.++|++++++|+.++|
T Consensus 78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~ 125 (256)
T PRK07889 78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLK 125 (256)
T ss_pred HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHH
Confidence 99999999999999999863 2346788999999999999876
No 28
>PRK08589 short chain dehydrogenase; Validated
Probab=99.90 E-value=1e-22 Score=145.26 Aligned_cols=114 Identities=26% Similarity=0.358 Sum_probs=100.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+++|++||||+++|||+++|+.|+++|++|++++|+ +..++...++... +.++..+.+|+++.++++++++++.++
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999999 6677766666543 457889999999999999999999999
Q ss_pred CCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|+||||||+.. +..+.+.+.|++++++|+.|++
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 119 (272)
T PRK08589 80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTF 119 (272)
T ss_pred cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHH
Confidence 999999999999863 3346788999999999999875
No 29
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.90 E-value=7.1e-23 Score=147.73 Aligned_cols=117 Identities=26% Similarity=0.353 Sum_probs=102.2
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
++.++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++...++.. +.++..+.+|++|.++++++++++
T Consensus 3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (296)
T PRK05872 3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEA 79 (296)
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999998887776665531 356777889999999999999999
Q ss_pred HhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+.++++|++|||||+.. +..+.+.++|++++++|+.|++
T Consensus 80 ~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~ 121 (296)
T PRK05872 80 VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVF 121 (296)
T ss_pred HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHH
Confidence 999999999999999863 4557899999999999999876
No 30
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.90 E-value=7.2e-23 Score=145.05 Aligned_cols=117 Identities=11% Similarity=0.069 Sum_probs=95.2
Q ss_pred CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGAS--SGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 20 ~~~~~k~~litG~~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+++++|+++||||+ +|||+++|++|+++|++|++++|+.... +..+++.....+.++.++++|++|+++++++++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 81 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEVRELADTLEGQESLLLPCDVTSDEEITACFETI 81 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHH
Confidence 46789999999997 8999999999999999999998764221 12222322222456888999999999999999999
Q ss_pred HhcCCCccEEEECcccCC------CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG------TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+++|++|++|||||+.. +..+.+.++|.+.+++|+.+++
T Consensus 82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 127 (257)
T PRK08594 82 KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLT 127 (257)
T ss_pred HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHH
Confidence 999999999999999753 3346889999999999998865
No 31
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.90 E-value=7.9e-23 Score=145.31 Aligned_cols=113 Identities=12% Similarity=0.154 Sum_probs=94.7
Q ss_pred CCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 22 AAGVTAIVTGASS--GIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 22 ~~~k~~litG~~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++|+++||||++ |||+++|+.|+++|++|++++|+ .+.++..+++.... ..+.++.+|++|+++++++++++.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence 6799999999986 99999999999999999999987 34444455555442 3456789999999999999999999
Q ss_pred cCCCccEEEECcccCCC-------CCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICGT-------PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++|++|||||+... ..+.+.++|++++++|+.|++
T Consensus 81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 125 (262)
T PRK07984 81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV 125 (262)
T ss_pred hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHH
Confidence 99999999999997531 235788999999999999875
No 32
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.90 E-value=2e-22 Score=142.30 Aligned_cols=116 Identities=26% Similarity=0.301 Sum_probs=100.8
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc-hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA-AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
+++++|+++|||+++|||.++|++|+++|++|++++|+.+ ..++..+++... +.++..+.+|++|+++++++++++.
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~ 81 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVARTE 81 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999764 345556666544 4568889999999999999999999
Q ss_pred hcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.++++|++|||+|... +..+.+.++|++++++|+.++|
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (254)
T PRK06114 82 AELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVF 122 (254)
T ss_pred HHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhH
Confidence 99999999999999864 3456889999999999999986
No 33
>PRK09242 tropinone reductase; Provisional
Probab=99.89 E-value=1.7e-22 Score=142.69 Aligned_cols=120 Identities=27% Similarity=0.292 Sum_probs=106.9
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+++.+++|+++|||++++||.+++++|+++|++|++++|+.+..++...++....++.++.++.+|++++++++++++++
T Consensus 3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (257)
T PRK09242 3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV 82 (257)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999998888887777776655678999999999999999999999
Q ss_pred HhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+.++++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 124 (257)
T PRK09242 83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAF 124 (257)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHH
Confidence 999999999999999753 4457889999999999999875
No 34
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.7e-22 Score=143.29 Aligned_cols=112 Identities=25% Similarity=0.318 Sum_probs=98.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++|+++|||+++|||++++++|+++|++|++++|+.+..++...++ +.++.++++|++++++++++++++.+.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVAR 77 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999987766655544 456888999999999999999999999
Q ss_pred CCCccEEEECcccCC-CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG-TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||||... ...+.+.++|++.+++|+.+++
T Consensus 78 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~ 115 (261)
T PRK08265 78 FGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAA 115 (261)
T ss_pred hCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHH
Confidence 999999999999763 2346788999999999999876
No 35
>PRK06196 oxidoreductase; Provisional
Probab=99.89 E-value=1.5e-22 Score=147.19 Aligned_cols=120 Identities=49% Similarity=0.665 Sum_probs=102.1
Q ss_pred chhhhccCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHH
Q 042455 12 TAEEVTQGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVR 91 (138)
Q Consensus 12 ~~~~~~~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~ 91 (138)
.+..+....++.+|+++||||++|||+++|+.|+++|++|++++|+.++.++...++. .+.++++|++|.++++
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~ 87 (315)
T PRK06196 14 TAEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVR 87 (315)
T ss_pred cHHHHhcCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHH
Confidence 3444444556789999999999999999999999999999999999877766655542 2678899999999999
Q ss_pred HHHHHHHhcCCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 92 KFASDFTARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 92 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++++.+.++++|+||||||...+....+.++|+..+++|+.|++
T Consensus 88 ~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~ 133 (315)
T PRK06196 88 AFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHF 133 (315)
T ss_pred HHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHH
Confidence 9999999989999999999998755556677889999999999875
No 36
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.89 E-value=1.9e-22 Score=143.05 Aligned_cols=114 Identities=12% Similarity=0.134 Sum_probs=94.8
Q ss_pred CCCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASS--GIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 21 ~~~~k~~litG~~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
.+++|+++||||++ |||+++|+.|+++|++|++++|+. ..++..+++.... +. ..++++|++|+++++++++++.
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g~-~~~~~~Dv~~~~~v~~~~~~~~ 81 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-GC-NFVSELDVTNPKSISNLFDDIK 81 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-CC-ceEEEccCCCHHHHHHHHHHHH
Confidence 46799999999997 999999999999999999999874 3344445554432 22 2467899999999999999999
Q ss_pred hcCCCccEEEECcccCC------CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG------TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|+||||+|... +..+.+.++|++++++|+.+++
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~ 126 (260)
T PRK06603 82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLL 126 (260)
T ss_pred HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999753 3457899999999999999876
No 37
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.89 E-value=2.2e-22 Score=141.95 Aligned_cols=117 Identities=29% Similarity=0.348 Sum_probs=103.3
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
++++++|+++|||++++||++++++|+++|++|++++|++++.++....+... +.++.++++|++|.++++++++++.
T Consensus 5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (255)
T PRK07523 5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFE 82 (255)
T ss_pred ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999988877776666544 4578899999999999999999999
Q ss_pred hcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 83 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 123 (255)
T PRK07523 83 AEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVF 123 (255)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 99999999999999863 4456789999999999998875
No 38
>PLN02253 xanthoxin dehydrogenase
Probab=99.89 E-value=2.9e-22 Score=143.20 Aligned_cols=118 Identities=24% Similarity=0.321 Sum_probs=101.3
Q ss_pred ccCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH
Q 042455 17 TQGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASD 96 (138)
Q Consensus 17 ~~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 96 (138)
.+...+++|+++||||+++||.+++++|+++|++|++++|+.+..++...++. .+.++.++++|++|.+++++++++
T Consensus 11 ~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~ 87 (280)
T PLN02253 11 LPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDVSRAVDF 87 (280)
T ss_pred ccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHHHHHHHH
Confidence 34456889999999999999999999999999999999998776666555542 135688999999999999999999
Q ss_pred HHhcCCCccEEEECcccCC----CCCccCHHHHHHHhhhcccccc
Q 042455 97 FTARALPLNILINKAGICG----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 97 ~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.++++++|+||||||... +..+.+.++|++++++|+.|++
T Consensus 88 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 132 (280)
T PLN02253 88 TVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVF 132 (280)
T ss_pred HHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHH
Confidence 9999999999999999763 2346789999999999999875
No 39
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.89 E-value=1.1e-22 Score=135.77 Aligned_cols=115 Identities=25% Similarity=0.307 Sum_probs=101.8
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.++.|.++|||+++|||+++++.|+++|++|++.+++...+++....|... .....+.||+++.++++..+++..+.
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v~~~l~e~~k~ 87 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDVQNTLEEMEKS 87 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHHHHHHHHHHHh
Confidence 356789999999999999999999999999999999988877777666321 45678899999999999999999999
Q ss_pred CCCccEEEECcccCCCC--CccCHHHHHHHhhhccccccC
Q 042455 101 ALPLNILINKAGICGTP--FMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~g~~~ 138 (138)
+|++++||||||+..+. ..++.++|++++.+|+.|.|+
T Consensus 88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl 127 (256)
T KOG1200|consen 88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFL 127 (256)
T ss_pred cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHH
Confidence 99999999999998753 367999999999999999874
No 40
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.89 E-value=9.4e-23 Score=135.35 Aligned_cols=111 Identities=38% Similarity=0.547 Sum_probs=98.5
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC--cchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGV-HVIMADRN--MAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
|+++||||++|||++++++|+++|. .|++++|+ .+..++...++... +.++.++++|++++++++++++++.+++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence 7899999999999999999999966 78889998 56677777777755 5889999999999999999999999999
Q ss_pred CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|||+|... +..+.+.++|+++|++|+.+++
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 116 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPF 116 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHH
T ss_pred ccccccccccccccccccccccchhhhhccccccceee
Confidence 99999999999875 3446788999999999998875
No 41
>PRK06194 hypothetical protein; Provisional
Probab=99.89 E-value=3.6e-22 Score=143.07 Aligned_cols=115 Identities=29% Similarity=0.335 Sum_probs=101.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++|++|||||++|||+++|++|+++|++|++++|+.+.+++...++... +.++.++.+|++|.++++++++.+.+.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999888777776666543 457888999999999999999999999
Q ss_pred CCCccEEEECcccCCC--CCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICGT--PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|+||||||.... ..+.+.++|++.+++|+.|++
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~ 119 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVI 119 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHH
Confidence 9999999999998743 446788999999999999875
No 42
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.89 E-value=2.4e-22 Score=143.46 Aligned_cols=115 Identities=12% Similarity=0.109 Sum_probs=93.9
Q ss_pred CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGAS--SGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 20 ~~~~~k~~litG~~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
..|.+|+++|||++ +|||+++|+.|+++|++|++++|++. ..+..+++.... + ....+++|++|+++++++++++
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~-~-~~~~~~~Dl~~~~~v~~~~~~~ 82 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAEL-G-AFVAGHCDVTDEASIDAVFETL 82 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhc-C-CceEEecCCCCHHHHHHHHHHH
Confidence 34678999999997 89999999999999999999988632 223333343332 2 2456899999999999999999
Q ss_pred HhcCCCccEEEECcccCC------CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG------TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++++|+||||||+.. +..+.+.++|+++|++|+.+++
T Consensus 83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~ 128 (272)
T PRK08159 83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFT 128 (272)
T ss_pred HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHH
Confidence 999999999999999753 3446889999999999999876
No 43
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.89 E-value=2.4e-22 Score=142.31 Aligned_cols=118 Identities=14% Similarity=0.237 Sum_probs=98.7
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEec-CcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADR-NMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+.++++|+++||||++|||+++++.|+++|++|++++| +.+.++....++.... +.++.++++|++|+++++++++++
T Consensus 3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHH
Confidence 34688999999999999999999999999999998875 4555566555554432 457889999999999999999999
Q ss_pred HhcCCCccEEEECcccCC--------CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG--------TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~--------~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+.++++|++|||||..+ +..+.+.++|.+.+++|+.+++
T Consensus 82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 129 (260)
T PRK08416 82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFV 129 (260)
T ss_pred HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHH
Confidence 999999999999998642 3346788999999999988765
No 44
>PRK05717 oxidoreductase; Validated
Probab=99.89 E-value=2.6e-22 Score=141.66 Aligned_cols=116 Identities=26% Similarity=0.290 Sum_probs=100.0
Q ss_pred ccCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH
Q 042455 17 TQGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASD 96 (138)
Q Consensus 17 ~~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 96 (138)
-|.+.+++|+++|||++++||.++|+.|+++|++|++++|+.++.++...++ +.++.++++|+++.+++.+++++
T Consensus 3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~ 77 (255)
T PRK05717 3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAE 77 (255)
T ss_pred CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHH
Confidence 4667788999999999999999999999999999999999876655544333 35678899999999999999999
Q ss_pred HHhcCCCccEEEECcccCC----CCCccCHHHHHHHhhhcccccc
Q 042455 97 FTARALPLNILINKAGICG----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 97 ~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.++++++|++|||||... +..+.+.++|++.+++|+.+++
T Consensus 78 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (255)
T PRK05717 78 VLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPM 122 (255)
T ss_pred HHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 9999999999999999863 2335788999999999999876
No 45
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.89 E-value=2.4e-22 Score=142.58 Aligned_cols=114 Identities=11% Similarity=0.066 Sum_probs=93.1
Q ss_pred CCCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGA--SSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 21 ~~~~k~~litG~--~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
.+++|+++|||| ++|||+++|+.|+++|++|++++|+. +.++..+++.... .....+++|++|+++++++++++.
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLG 79 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHH
Confidence 377999999997 67999999999999999999988763 3334444454332 234578999999999999999999
Q ss_pred hcCCCccEEEECcccCCC------C-CccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICGT------P-FMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~~------~-~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++++|++|||||+... . .+.+.++|++++++|+.+++
T Consensus 80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~ 125 (261)
T PRK08690 80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLP 125 (261)
T ss_pred HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHH
Confidence 999999999999998642 1 24678899999999998875
No 46
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.89 E-value=2.9e-22 Score=145.97 Aligned_cols=116 Identities=39% Similarity=0.552 Sum_probs=100.4
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.++.+|+++||||++|||.++++.|+++|++|++++|+.+++++...++... +.++.++.+|+++.++++++++++.+
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (322)
T PRK07453 2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRA 79 (322)
T ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999988887777666432 45688899999999999999999887
Q ss_pred cCCCccEEEECcccCCC---CCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICGT---PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|+||||||+..+ ..+.+.++|+.++++|+.|++
T Consensus 80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~ 120 (322)
T PRK07453 80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHF 120 (322)
T ss_pred hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHH
Confidence 77899999999998643 235688999999999999876
No 47
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.89 E-value=1.4e-22 Score=138.02 Aligned_cols=112 Identities=27% Similarity=0.414 Sum_probs=98.4
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++||++++||+.+|||++++++|+++|..+.++..+.|. .+...+|++.+|..++.+++||+++..++++.++++..
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 46789999999999999999999999999876666555444 45577888899999999999999999999999999999
Q ss_pred cCCCccEEEECcccCCCCCccCHHHHHHHhhhccccccC
Q 042455 100 RALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
.+|.||++||+||+ .+..+|++.+.+|+.|.++
T Consensus 80 ~fg~iDIlINgAGi------~~dkd~e~Ti~vNLtgvin 112 (261)
T KOG4169|consen 80 TFGTIDILINGAGI------LDDKDWERTINVNLTGVIN 112 (261)
T ss_pred HhCceEEEEccccc------ccchhHHHhhccchhhhhh
Confidence 99999999999998 3467799999999998653
No 48
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.89 E-value=4.4e-22 Score=143.51 Aligned_cols=118 Identities=28% Similarity=0.311 Sum_probs=101.0
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+..++.+|+++||||++|||+++|+.|+++|++|++++|+.+.+++..+++... +.++.++.+|++|.+++.++++++
T Consensus 34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~ 111 (293)
T PRK05866 34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADV 111 (293)
T ss_pred CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999988888777776544 456888999999999999999999
Q ss_pred HhcCCCccEEEECcccCCC--CCc--cCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICGT--PFM--LSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~~--~~~--~~~~~~~~~~~~n~~g~~ 137 (138)
.+.++++|++|||||.... ..+ .+.++++..+++|+.|++
T Consensus 112 ~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~ 155 (293)
T PRK05866 112 EKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPL 155 (293)
T ss_pred HHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHH
Confidence 9999999999999998642 222 246788999999998865
No 49
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.89 E-value=5e-22 Score=141.83 Aligned_cols=118 Identities=25% Similarity=0.329 Sum_probs=102.7
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
..+++.+|+++|||++++||+++++.|+++|++|++++|+.+..++...++... +.++.++++|+++++++.++++++
T Consensus 4 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (278)
T PRK08277 4 NLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQI 81 (278)
T ss_pred ceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHH
Confidence 344688999999999999999999999999999999999988777777776543 457889999999999999999999
Q ss_pred HhcCCCccEEEECcccCCC-----------------CCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICGT-----------------PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~~-----------------~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++++|++|||||...+ ..+.+.++|++.+++|+.+++
T Consensus 82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 138 (278)
T PRK08277 82 LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTL 138 (278)
T ss_pred HHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHH
Confidence 9999999999999996421 335778999999999999875
No 50
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.88 E-value=8e-22 Score=139.98 Aligned_cols=118 Identities=21% Similarity=0.255 Sum_probs=104.3
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
..+++++|+++|||++++||.+++++|+++|++|++++|+.++.++....+... +.++.++++|+++.++++++++++
T Consensus 4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (265)
T PRK07097 4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQI 81 (265)
T ss_pred cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999988887777776544 457889999999999999999999
Q ss_pred HhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++++|++|||+|... +..+.+.++|++++++|+.|++
T Consensus 82 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 123 (265)
T PRK07097 82 EKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPF 123 (265)
T ss_pred HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHH
Confidence 999999999999999864 4457889999999999998875
No 51
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.88 E-value=6.3e-22 Score=143.47 Aligned_cols=117 Identities=28% Similarity=0.352 Sum_probs=100.9
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCc-chhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNM-AAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASD 96 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 96 (138)
+..++++|+++|||+++|||+++|++|+++|++|++++++. +..++...++... +.++.++.+|++|.+++++++++
T Consensus 6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~ 83 (306)
T PRK07792 6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVAT 83 (306)
T ss_pred CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHH
Confidence 44568899999999999999999999999999999998754 4455666666554 56788999999999999999999
Q ss_pred HHhcCCCccEEEECcccCCC--CCccCHHHHHHHhhhcccccc
Q 042455 97 FTARALPLNILINKAGICGT--PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 97 ~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.+ ++++|+||||||+..+ ..+.+.++|++++++|+.|++
T Consensus 84 ~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~ 125 (306)
T PRK07792 84 AVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHF 125 (306)
T ss_pred HHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHH
Confidence 988 9999999999998743 446788999999999999876
No 52
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.88 E-value=6.4e-22 Score=139.66 Aligned_cols=116 Identities=18% Similarity=0.258 Sum_probs=98.1
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+.+++++|+++|||+++|||++++++|+++|++|++++++.. ++..+++... +.++..+++|++|.++++++++++
T Consensus 4 ~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 79 (253)
T PRK08993 4 DAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERA 79 (253)
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHH
Confidence 344688999999999999999999999999999998877542 3334444433 456888999999999999999999
Q ss_pred HhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++++|++|||||... +..+.+.++|++++++|+.+++
T Consensus 80 ~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~ 121 (253)
T PRK08993 80 VAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVF 121 (253)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHH
Confidence 999999999999999763 3457889999999999999876
No 53
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.88 E-value=7.1e-22 Score=139.17 Aligned_cols=116 Identities=26% Similarity=0.320 Sum_probs=102.2
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++++|+++|||++++||.+++++|+++|++|++++|+.+..++....+... +.++..+.+|+++.+++.++++++.+
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~ 80 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIA 80 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999988877777666554 46788999999999999999999999
Q ss_pred cCCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 121 (253)
T PRK06172 81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVW 121 (253)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 9999999999999753 2446789999999999998874
No 54
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.88 E-value=8.8e-22 Score=140.50 Aligned_cols=116 Identities=20% Similarity=0.205 Sum_probs=98.3
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcch-------hHHHHHHHHhcCCCCeeEEEEecCCCHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAA-------GRDVKVAIVMQNPAAKVDVMELDLSSLASVRK 92 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~ 92 (138)
+++.+|+++||||++|||.++|+.|+++|++|++++|+.+. .++...++... +.++.++.+|+++++++.+
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~ 79 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAA 79 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHH
Confidence 34778999999999999999999999999999999997653 33334444433 4578899999999999999
Q ss_pred HHHHHHhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 93 FASDFTARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 93 ~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++++.+.++++|++|||||... +..+.+.++|++++++|+.|++
T Consensus 80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~ 126 (273)
T PRK08278 80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTF 126 (273)
T ss_pred HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHH
Confidence 99999999999999999999753 4456788999999999999876
No 55
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=2.2e-22 Score=135.18 Aligned_cols=112 Identities=28% Similarity=0.321 Sum_probs=98.3
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
|.++|-++|||||++|||+++|++|.+.|-.|++++|+++++++..+.. ..+....||+.|.++.+.+++.+++
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~------p~~~t~v~Dv~d~~~~~~lvewLkk 74 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN------PEIHTEVCDVADRDSRRELVEWLKK 74 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC------cchheeeecccchhhHHHHHHHHHh
Confidence 3578999999999999999999999999999999999999988877653 4577889999999999999999999
Q ss_pred cCCCccEEEECcccCCCC----CccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICGTP----FMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~~----~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|+.++++|||||+.++. .+.+.+..++-+++|+.++.
T Consensus 75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API 116 (245)
T COG3967 75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPI 116 (245)
T ss_pred hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHH
Confidence 999999999999998632 24466777889999998875
No 56
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.88 E-value=7.8e-22 Score=140.12 Aligned_cols=118 Identities=19% Similarity=0.232 Sum_probs=101.7
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
.++++++|+++|||++++||.+++++|+++|++|++++|+.+..+....++... +.++.++.+|++++++++++++++
T Consensus 3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~ 80 (264)
T PRK07576 3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQI 80 (264)
T ss_pred ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999987776666566544 346788999999999999999999
Q ss_pred HhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
...++++|++|||+|... +..+.+.++|++.+++|+.|++
T Consensus 81 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~ 122 (264)
T PRK07576 81 ADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTF 122 (264)
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHH
Confidence 988999999999998653 3456788999999999999875
No 57
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.1e-21 Score=138.23 Aligned_cols=116 Identities=28% Similarity=0.433 Sum_probs=102.4
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++++|+++|||++++||.+++++|+++|++|++++|+.+..++..+++... +.++.++++|+++.++++++++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999988877777777554 45678899999999999999999999
Q ss_pred cCCCccEEEECcccC---CCCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGIC---GTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||+|.. .+..+.+.++|++.+++|+.+++
T Consensus 82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (252)
T PRK07035 82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYF 122 (252)
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 999999999999964 24456788999999999999875
No 58
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.88 E-value=1.1e-21 Score=138.69 Aligned_cols=117 Identities=21% Similarity=0.304 Sum_probs=99.9
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+.+++++|++|||||+++||.++++.|+++|++|++++|+ +..++..+.+... +.++.++.+|+++.++++++++++
T Consensus 9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~ 85 (258)
T PRK06935 9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEA 85 (258)
T ss_pred ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence 4456889999999999999999999999999999999998 4555555444433 456889999999999999999999
Q ss_pred HhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+.++++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 86 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 127 (258)
T PRK06935 86 LEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVY 127 (258)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHH
Confidence 999999999999999763 3456788999999999999865
No 59
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.88 E-value=8.1e-22 Score=143.37 Aligned_cols=113 Identities=38% Similarity=0.548 Sum_probs=98.2
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRG-VHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
.+|+++|||+++|||+++|+.|+++| ++|++++|+.++.++...++... +.++.++.+|+++.++++++++++.+.+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP--KDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 37899999999999999999999999 99999999988877766666422 4567889999999999999999998888
Q ss_pred CCccEEEECcccCCC---CCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICGT---PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|||||+..+ ....+.++|++++++|+.|++
T Consensus 80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~ 118 (314)
T TIGR01289 80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHF 118 (314)
T ss_pred CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHH
Confidence 999999999998643 235688999999999999876
No 60
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.88 E-value=8.6e-22 Score=139.59 Aligned_cols=112 Identities=21% Similarity=0.282 Sum_probs=95.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+++|+++||||++|||++++++|+++|++|++++|+++.+++...++ +.++.++++|+++.++++++++++.+.
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDA 77 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999987766655443 345788999999999999999999999
Q ss_pred CCCccEEEECcccCC---CCCccCHHH----HHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG---TPFMLSKDN----IELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~---~~~~~~~~~----~~~~~~~n~~g~~ 137 (138)
++++|++|||||+.. +..+.+.++ |++++++|+.+++
T Consensus 78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 121 (263)
T PRK06200 78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYL 121 (263)
T ss_pred cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHH
Confidence 999999999999753 333555554 8999999999875
No 61
>PRK06128 oxidoreductase; Provisional
Probab=99.88 E-value=2e-21 Score=140.43 Aligned_cols=115 Identities=25% Similarity=0.290 Sum_probs=97.7
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc--hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA--AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
.+++|++|||||++|||+++++.|+++|++|++++++.+ ..++....+... +.++.++.+|+++.++++++++++.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 129 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAV 129 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence 467899999999999999999999999999999887643 234444444443 5678899999999999999999999
Q ss_pred hcCCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.++++|+||||||... +..+.+.++|++++++|+.|++
T Consensus 130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 171 (300)
T PRK06128 130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMF 171 (300)
T ss_pred HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 99999999999999752 3457899999999999999876
No 62
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.88 E-value=5.1e-22 Score=143.63 Aligned_cols=119 Identities=17% Similarity=0.188 Sum_probs=96.0
Q ss_pred CCCCCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhc--------CCC---CeeEEEEecC-
Q 042455 19 GIDAAGVTAIVTGA--SSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQ--------NPA---AKVDVMELDL- 84 (138)
Q Consensus 19 ~~~~~~k~~litG~--~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--------~~~---~~~~~~~~D~- 84 (138)
.++++||++||||+ ++|||+++|+.|+++|++|++ +|+.++++.....+... ..+ .....+.+|+
T Consensus 4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 82 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV 82 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence 34589999999999 799999999999999999988 78877777666555421 101 1146788898
Q ss_pred -CC------------------HHHHHHHHHHHHhcCCCccEEEECcccC----CCCCccCHHHHHHHhhhccccccC
Q 042455 85 -SS------------------LASVRKFASDFTARALPLNILINKAGIC----GTPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 85 -~~------------------~~~~~~~~~~~~~~~~~id~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
++ .++++++++++.+++|++|+||||||.. .+..+.+.++|+++|++|+.++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~ 159 (303)
T PLN02730 83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS 159 (303)
T ss_pred cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 33 4489999999999999999999999753 345678999999999999999863
No 63
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.3e-21 Score=137.89 Aligned_cols=113 Identities=23% Similarity=0.294 Sum_probs=99.3
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+|+++|||+++|||.++++.|+++|++|++++|+.+..++...++... +.++.++++|++|+++++++++++.+.+++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 589999999999999999999999999999999987777766666543 357889999999999999999999999999
Q ss_pred ccEEEECcccCC--CCCccCHHHHHHHhhhccccccC
Q 042455 104 LNILINKAGICG--TPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
+|++|||+|... +..+.+.++|++++++|+.|+++
T Consensus 79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 115 (252)
T PRK07677 79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFY 115 (252)
T ss_pred ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHH
Confidence 999999999652 44578999999999999998763
No 64
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.5e-21 Score=137.65 Aligned_cols=115 Identities=17% Similarity=0.146 Sum_probs=101.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+++|+++||||+++||++++++|+++|++|++++|+++..++...++... +.++.++.+|+++.++++++++++.++
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALER 79 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999988777766666543 456889999999999999999999999
Q ss_pred CCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||||... +..+.+.++|++.+++|+.|++
T Consensus 80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 119 (258)
T PRK07890 80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTL 119 (258)
T ss_pred cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHH
Confidence 999999999999753 3446789999999999998875
No 65
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.88 E-value=1.8e-21 Score=137.30 Aligned_cols=118 Identities=26% Similarity=0.356 Sum_probs=104.0
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+.+.+++|+++|||++++||++++++|+++|++|++++|+.+.+++...++... +.++.++.+|+++++++.++++++
T Consensus 5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (256)
T PRK06124 5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARI 82 (256)
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHH
Confidence 355688999999999999999999999999999999999988777777766554 456889999999999999999999
Q ss_pred HhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
...++++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 83 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 124 (256)
T PRK06124 83 DAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPI 124 (256)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 999999999999999763 3457888999999999998875
No 66
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.87 E-value=1.1e-21 Score=138.97 Aligned_cols=112 Identities=23% Similarity=0.310 Sum_probs=93.9
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++|+++||||++|||++++++|+++|++|++++|+.+..+++... . +.++..+++|+++.+++.++++++.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-GDAVVGVEGDVRSLDDHKEAVARCVAA 76 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-CCceEEEEeccCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999987766554332 1 456888999999999999999999999
Q ss_pred CCCccEEEECcccCC---CCCccC----HHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG---TPFMLS----KDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~---~~~~~~----~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||||+.. +..+.+ .++|++++++|+.+++
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~ 120 (262)
T TIGR03325 77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYL 120 (262)
T ss_pred hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHH
Confidence 999999999999752 222333 2579999999999876
No 67
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2.3e-21 Score=137.50 Aligned_cols=116 Identities=23% Similarity=0.265 Sum_probs=101.7
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.++++|+++|||++++||.+++++|+++|++|++++|+.+..++....+... +.++.++.+|+++++++.++++++.+
T Consensus 6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999988777776666543 45688899999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||||... +..+.+.++|.+++++|+.+++
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 123 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAH 123 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHH
Confidence 9999999999999753 3456788999999999998865
No 68
>PRK08643 acetoin reductase; Validated
Probab=99.87 E-value=2.3e-21 Score=136.76 Aligned_cols=112 Identities=21% Similarity=0.284 Sum_probs=99.2
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+|+++|||++++||.++++.|+++|++|++++|+.+..++...++... +.++.++++|++++++++++++++.+++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 789999999999999999999999999999999988777777666544 457888999999999999999999999999
Q ss_pred ccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 115 (256)
T PRK08643 80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVI 115 (256)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 999999999753 3456789999999999998864
No 69
>PRK06398 aldose dehydrogenase; Validated
Probab=99.87 E-value=1.5e-21 Score=138.24 Aligned_cols=104 Identities=29% Similarity=0.329 Sum_probs=92.9
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++|+++|||+++|||+++|++|+++|++|++++|+.+. ..++.++++|++|+++++++++++.++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~ 69 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISK 69 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999997543 124778999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||||... +..+.+.++|++++++|+.|++
T Consensus 70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 108 (258)
T PRK06398 70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIF 108 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 999999999999763 4557899999999999999876
No 70
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.87 E-value=2.7e-21 Score=136.55 Aligned_cols=112 Identities=28% Similarity=0.394 Sum_probs=98.8
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+.+|+++|||++++||.++|+.|+++|++|++++|+.+..++...++ +.++.++.+|++++++++++++++.+.
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVER 77 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 477899999999999999999999999999999999988776655544 345788999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 116 (257)
T PRK07067 78 FGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLF 116 (257)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHH
Confidence 999999999999763 4557788999999999999875
No 71
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.87 E-value=2.9e-21 Score=136.51 Aligned_cols=114 Identities=21% Similarity=0.267 Sum_probs=97.3
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+.+|+++||||++|||.+++++|+++|++|++++|++. .++...++... +.++.++.+|+++.+++.++++++.++
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 477899999999999999999999999999999999853 34444555433 456888999999999999999999999
Q ss_pred CCCccEEEECcccC---CCCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGIC---GTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||||.. .+..+.+.++|++.+++|+.+++
T Consensus 82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 121 (260)
T PRK12823 82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTL 121 (260)
T ss_pred cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHH
Confidence 99999999999964 34557889999999999998865
No 72
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2e-21 Score=138.44 Aligned_cols=111 Identities=26% Similarity=0.336 Sum_probs=97.3
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
+|++++++||||++|||+++++.|+++|++|++++|+++.+++....+. ++.++.+|++|++++.++++++.+.
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEAD 75 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999887766555441 4678899999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++++++|+.|++
T Consensus 76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~ 114 (273)
T PRK07825 76 LGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVI 114 (273)
T ss_pred cCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHH
Confidence 999999999999863 4456788999999999998765
No 73
>PRK09186 flagellin modification protein A; Provisional
Probab=99.87 E-value=3.4e-21 Score=135.74 Aligned_cols=116 Identities=22% Similarity=0.243 Sum_probs=100.2
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
+++|+++|||++++||+++|+.|+++|++|++++|+.+..++...++....+...+.++.+|++|++++.++++++.+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999988887777776544334456777999999999999999999999
Q ss_pred CCccEEEECcccCC-----CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG-----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~-----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|||||... +..+.+.++|...+++|+.+++
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSF 122 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHH
Confidence 99999999998542 3457889999999999998875
No 74
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=2e-21 Score=137.89 Aligned_cols=113 Identities=14% Similarity=0.107 Sum_probs=90.1
Q ss_pred CCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 22 AAGVTAIVTGA--SSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 22 ~~~k~~litG~--~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++|+++|||| ++|||+++|++|+++|++|++++|... .++..+++.... +. ...+++|++|+++++++++++.+
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~-~~-~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEF-GS-DLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhc-CC-cceeeccCCCHHHHHHHHHHHHH
Confidence 67899999996 679999999999999999999876422 122223333322 22 34689999999999999999999
Q ss_pred cCCCccEEEECcccCCC------C-CccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICGT------P-FMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~------~-~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++++|++|||||.... . .+.+.++|++.|++|+.+++
T Consensus 81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~ 125 (260)
T PRK06997 81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFP 125 (260)
T ss_pred HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHH
Confidence 99999999999998632 1 24788999999999999876
No 75
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.87 E-value=3.7e-21 Score=135.85 Aligned_cols=115 Identities=20% Similarity=0.297 Sum_probs=98.3
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++|++|+++||||+++||++++++|+++|++|++++|+++.. +...++... +.++.++.+|+++.++++++++++.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 568899999999999999999999999999999999988765 555555544 45688999999999999999999999
Q ss_pred cCCCccEEEECcccCCC-CCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICGT-PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||+|.... ..+.+.++|++.+++|+.+++
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~ 118 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYY 118 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHH
Confidence 99999999999997532 234444899999999998765
No 76
>PRK07985 oxidoreductase; Provisional
Probab=99.87 E-value=4.8e-21 Score=138.16 Aligned_cols=115 Identities=25% Similarity=0.249 Sum_probs=96.7
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc--hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA--AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
++++|+++||||++|||+++|+.|+++|++|++++|+.. ..+++...+... +.++.++.+|+++.+++.++++++.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~ 123 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAH 123 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence 478899999999999999999999999999999887542 344444433332 4568889999999999999999999
Q ss_pred hcCCCccEEEECcccC---CCCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGIC---GTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.++++|++|||||.. .+..+.+.++|++++++|+.|++
T Consensus 124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 165 (294)
T PRK07985 124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALF 165 (294)
T ss_pred HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 9999999999999974 24557889999999999999875
No 77
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.87 E-value=5.7e-21 Score=135.34 Aligned_cols=117 Identities=24% Similarity=0.322 Sum_probs=101.2
Q ss_pred CCCCCEEEEeCCCC-chHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASS-GIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~-~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.+++|+++|||+++ |||.++++.|+++|++|++++|+.++.++...++....+..++.++++|+++.++++++++++.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999985 99999999999999999999999887777776665544335688899999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||+|... +..+.+.++|.+.+++|+.+++
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 133 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTF 133 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 9999999999999753 3457788999999999998875
No 78
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.87 E-value=4.6e-21 Score=134.59 Aligned_cols=114 Identities=25% Similarity=0.289 Sum_probs=101.0
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+|+++|||+++|||++++++|+++|++|++++|+.+..++....+....++.++.++.+|+++.+++.++++++.+.+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999998888877777766655678999999999999999999999999999
Q ss_pred ccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|++|||+|+.. +..+.+.+.+.+.+++|+.+++
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAAL 117 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHH
Confidence 999999999864 2345678889999999998764
No 79
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.87 E-value=6.4e-21 Score=134.59 Aligned_cols=117 Identities=26% Similarity=0.364 Sum_probs=102.3
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
++.+++|+++|||++++||.+++++|+++|++|++++|+.+..++...++... +.++.++.+|+++.+++.++++.+.
T Consensus 6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~ 83 (255)
T PRK06113 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAL 83 (255)
T ss_pred ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 44578999999999999999999999999999999999888777776666544 4578889999999999999999999
Q ss_pred hcCCCccEEEECcccCCC-CCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICGT-PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.++++|++|||+|...+ ..+.+.++|++.+++|+.+++
T Consensus 84 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~ 123 (255)
T PRK06113 84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFF 123 (255)
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHH
Confidence 999999999999997642 336788999999999999876
No 80
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=5.4e-21 Score=133.66 Aligned_cols=115 Identities=27% Similarity=0.344 Sum_probs=100.9
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++++++|||++++||.+++++|+++|++|++++|+.+..++...++... +.++.++.+|+++++++.++++++.++
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999988777766666543 467889999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.++++|++.+++|+.+++
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 120 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVY 120 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHH
Confidence 999999999999763 3446788999999999998865
No 81
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.87 E-value=5.1e-21 Score=134.38 Aligned_cols=113 Identities=22% Similarity=0.319 Sum_probs=95.8
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++|+++|||++++||.++|++|+++|++|++++|+.. ++....+... +.++..+.+|+++.+++.++++++.+.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999998752 2333334332 456889999999999999999999988
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 116 (248)
T TIGR01832 78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVF 116 (248)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHH
Confidence 999999999999864 3446788999999999998875
No 82
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.87 E-value=6.2e-21 Score=134.78 Aligned_cols=114 Identities=22% Similarity=0.209 Sum_probs=100.0
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+|+++|||++++||.++++.|+++|++|++++|+.+..++....+....+..++.++.+|+++.+++.++++++.+.+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999998877776666655442356889999999999999999999999999
Q ss_pred ccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|++|||+|... +..+.+.++|++.+++|+.|++
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYF 117 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHH
Confidence 999999999764 3457789999999999999875
No 83
>PRK06484 short chain dehydrogenase; Validated
Probab=99.87 E-value=3.4e-21 Score=148.15 Aligned_cols=112 Identities=23% Similarity=0.364 Sum_probs=99.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
...+|+++||||++|||+++|++|+++|++|++++|+.+.++++..++ +.++..+.+|++|+++++++++++.++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 340 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQAR 340 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHH
Confidence 357999999999999999999999999999999999987777665544 456778899999999999999999999
Q ss_pred CCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|+||||||... +..+.+.++|++++++|+.|++
T Consensus 341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 380 (520)
T PRK06484 341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAF 380 (520)
T ss_pred cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHH
Confidence 999999999999863 3457889999999999999886
No 84
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.87 E-value=6.6e-21 Score=134.95 Aligned_cols=115 Identities=23% Similarity=0.306 Sum_probs=98.3
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCc-chhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNM-AAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++|+++||||+++||.++|+.|+++|++|++++|+. +..+....++... +.++.++.+|++|.+++.++++++.+
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999988854 3445555555443 46788999999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~ 121 (261)
T PRK08936 82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAF 121 (261)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 9999999999999764 3446788999999999998875
No 85
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.86 E-value=8.1e-21 Score=134.15 Aligned_cols=115 Identities=30% Similarity=0.288 Sum_probs=101.2
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++|+++|||++++||.++++.|+++|++|++++|+++..++..+.+... +.++.++++|+++.++++++++++...
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAER 81 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999998877777777554 567888999999999999999999888
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|+..+++|+.+++
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 120 (262)
T PRK13394 82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAF 120 (262)
T ss_pred cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHH
Confidence 999999999999863 3346788999999999998864
No 86
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.86 E-value=6.3e-21 Score=133.97 Aligned_cols=116 Identities=28% Similarity=0.325 Sum_probs=99.8
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++++|+++|||++++||.+++++|+++|++|++++|+++..+...+++... +..+.++.+|+++.++++++++++.+
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVS 79 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999977766666665543 34677889999999999999999999
Q ss_pred cCCCccEEEECcccCC-----CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG-----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~-----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|+||||||... +..+.+.++|++.+++|+.+++
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (250)
T PRK07774 80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122 (250)
T ss_pred HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHH
Confidence 9999999999999853 2346788999999999998875
No 87
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.86 E-value=5.7e-21 Score=134.03 Aligned_cols=112 Identities=24% Similarity=0.347 Sum_probs=97.4
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+++|+++||||+++||.+++++|+++|++|++++|+.+..++..+++ +.++.++++|+++.+++.++++.+.+.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEA 77 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999876665554443 456888999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 116 (249)
T PRK06500 78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPY 116 (249)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 999999999999763 3346788999999999999875
No 88
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.86 E-value=8.7e-21 Score=133.32 Aligned_cols=114 Identities=32% Similarity=0.415 Sum_probs=100.2
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++|+++||||+++||.+++++|+++|++|++++|+.+..++...++. .+.++..+++|++|+++++++++++.++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~ 78 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAAR 78 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4779999999999999999999999999999999999877766666554 2567889999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (252)
T PRK06138 79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVF 117 (252)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHH
Confidence 999999999999764 3446788999999999998875
No 89
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.1e-20 Score=132.60 Aligned_cols=115 Identities=31% Similarity=0.412 Sum_probs=101.5
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+++|+++|||++++||.++++.|+++|++|++++|++++.++...+++.. +.++.++++|+++.++++++++++.+.
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999988877777766554 457889999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 120 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTF 120 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 999999999999864 3456788999999999998875
No 90
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.4e-20 Score=132.82 Aligned_cols=117 Identities=30% Similarity=0.507 Sum_probs=102.1
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
..++.+|+++|||++++||.++++.|+++|++|++++|+.+.+++...++... +.++.++.+|+++.++++++++++.
T Consensus 4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (258)
T PRK06949 4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAE 81 (258)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999988887777766544 3568899999999999999999999
Q ss_pred hcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.++++|++|||+|... +..+.+.++|+.++++|+.+++
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (258)
T PRK06949 82 TEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAF 122 (258)
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhH
Confidence 99999999999999753 3446678999999999998875
No 91
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.86 E-value=5.4e-21 Score=134.77 Aligned_cols=108 Identities=23% Similarity=0.314 Sum_probs=94.2
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++++|+++||||++|||+++++.|+++|++|++++|+.+. . . .+..+.++++|++++++++++++++.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~--~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T--V--DGRPAEFHAADVRDPDQVAALVDAIVE 71 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h--h--cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999998654 1 1 145678899999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||||... +..+.+.++|++++++|+.+++
T Consensus 72 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 111 (252)
T PRK07856 72 RHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPL 111 (252)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 9999999999999763 3446788999999999999875
No 92
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.86 E-value=7.8e-21 Score=134.14 Aligned_cols=111 Identities=19% Similarity=0.230 Sum_probs=93.0
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++.+|+++|||+++|||+++|+.|+++|++|++++++.+... .++... .+.++.+|++|+++++++++++.+
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK----GVFTIKCDVGNRDQVKKSKEVVEK 75 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC----CCeEEEecCCCHHHHHHHHHHHHH
Confidence 3577999999999999999999999999999988876543322 223221 367889999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||+|... +..+.+.++|++++++|+.|++
T Consensus 76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 115 (255)
T PRK06463 76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAI 115 (255)
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHH
Confidence 9999999999999863 4456789999999999999875
No 93
>PRK05855 short chain dehydrogenase; Validated
Probab=99.86 E-value=7.2e-21 Score=147.35 Aligned_cols=116 Identities=28% Similarity=0.298 Sum_probs=103.6
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
..+.+++++||||++|||++++++|+++|++|++++|+.+.+++....+... +.++.++.+|++|.++++++++++.+
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~ 388 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRA 388 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999988888877777654 45788999999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||||+.. +..+.+.++|++++++|+.|++
T Consensus 389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~ 428 (582)
T PRK05855 389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVI 428 (582)
T ss_pred hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 9999999999999864 4457889999999999999875
No 94
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.2e-20 Score=133.58 Aligned_cols=114 Identities=25% Similarity=0.403 Sum_probs=97.3
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+++|+++|||++++||++++++|+++|++|++++|+.+ ..+...++... +.++.++.+|+++.++++++++++.++
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999864 33344444332 456888999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 118 (263)
T PRK08226 80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVW 118 (263)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHH
Confidence 999999999999763 4456788999999999999875
No 95
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.86 E-value=4.6e-21 Score=126.17 Aligned_cols=114 Identities=30% Similarity=0.371 Sum_probs=103.2
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.+.+|-+++|||+++|+|++.+.+|+++|+.|++.+-..++..+..+++ +.++.+.++|++++++++..+...+.
T Consensus 5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~ 79 (260)
T KOG1199|consen 5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKA 79 (260)
T ss_pred hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHh
Confidence 3467889999999999999999999999999999999998888888887 88899999999999999999999999
Q ss_pred cCCCccEEEECcccCCC--------CCccCHHHHHHHhhhccccccC
Q 042455 100 RALPLNILINKAGICGT--------PFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~--------~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
+||++|.+|||||+... ....+.|++.+++++|++|+|+
T Consensus 80 kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfn 126 (260)
T KOG1199|consen 80 KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFN 126 (260)
T ss_pred hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeee
Confidence 99999999999998631 1236889999999999999985
No 96
>PRK06484 short chain dehydrogenase; Validated
Probab=99.86 E-value=6.8e-21 Score=146.50 Aligned_cols=111 Identities=25% Similarity=0.387 Sum_probs=98.5
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
..+|+++|||+++|||+++++.|+++|++|++++|+.+.+++...++ +.++.++++|++++++++++++++.+++
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREF 77 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999999988777665554 4567889999999999999999999999
Q ss_pred CCccEEEECcccCC----CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|+||||||+.. +..+.+.++|++++++|+.+++
T Consensus 78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (520)
T PRK06484 78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAY 117 (520)
T ss_pred CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHH
Confidence 99999999999842 3457889999999999999876
No 97
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=1.3e-20 Score=132.42 Aligned_cols=114 Identities=18% Similarity=0.271 Sum_probs=99.0
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEE-EecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIM-ADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
|++|+++||||+++||+++++.|+++|++|++ ..|+.++.++..++++.. +.++.++.+|++|++++.++++++.+.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999776 578877777766666554 567889999999999999999999999
Q ss_pred CCCccEEEECcccC--CCCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGIC--GTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|+||||+|.. .+..+.+.++|...+++|+.+++
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 118 (250)
T PRK08063 80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALL 118 (250)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 99999999999975 35567889999999999998875
No 98
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.5e-20 Score=132.92 Aligned_cols=113 Identities=27% Similarity=0.369 Sum_probs=97.4
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++++|+++|||+++|||+++++.|+++|++|++++|+.++.++...++.... +.++.++.+|+++++++++++++
T Consensus 3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~--- 78 (259)
T PRK06125 3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE--- 78 (259)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH---
Confidence 35789999999999999999999999999999999999888877777665543 45688899999999999888764
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 79 -~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (259)
T PRK06125 79 -AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYI 117 (259)
T ss_pred -hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 478999999999763 4557899999999999999876
No 99
>PRK12743 oxidoreductase; Provisional
Probab=99.86 E-value=1.2e-20 Score=133.32 Aligned_cols=113 Identities=23% Similarity=0.331 Sum_probs=96.8
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEec-CcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADR-NMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
++|+++||||+++||++++++|+++|++|+++.+ +.+..+....++... +.++.++.+|+++.++++++++++.+++
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3689999999999999999999999999988865 445556656666544 5678899999999999999999999999
Q ss_pred CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|+|+|... +..+.+.++|++++++|+.+++
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 116 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAF 116 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 99999999999864 3446789999999999999875
No 100
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.7e-20 Score=132.61 Aligned_cols=115 Identities=25% Similarity=0.320 Sum_probs=96.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecC-cchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRN-MAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+..+|+++|||++++||.+++++|+++|++|+++.+. .+..+....++... +.++.++.+|++|.+++.++++++.+
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~ 83 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASA 83 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999887664 44555555555443 45688999999999999999999998
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||||... +..+.+.++|++++++|+.|++
T Consensus 84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 123 (258)
T PRK09134 84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPF 123 (258)
T ss_pred HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHH
Confidence 8999999999999764 3457788999999999998875
No 101
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.7e-20 Score=132.62 Aligned_cols=115 Identities=25% Similarity=0.311 Sum_probs=95.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCc----chhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNM----AAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASD 96 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 96 (138)
++++|+++|||++++||.++|+.|+++|++|++++++. +..++..+++... +.++.++++|+++++++++++++
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHH
Confidence 46789999999999999999999999999976665432 2344444444433 45788899999999999999999
Q ss_pred HHhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 97 FTARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 97 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.++++++|++|||||... +..+.+.++|++++++|+.+++
T Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~ 125 (257)
T PRK12744 83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAF 125 (257)
T ss_pred HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHH
Confidence 9999999999999999753 3456788999999999999875
No 102
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=1.6e-20 Score=131.78 Aligned_cols=114 Identities=31% Similarity=0.405 Sum_probs=99.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++.+|+++||||+++||.+++++|+++|++|++++|+.+..++....+.. +.++.++.+|++|.++++++++++.++
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALER 78 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999998877776666543 356889999999999999999999888
Q ss_pred CCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 118 (251)
T PRK07231 79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPY 118 (251)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHH
Confidence 999999999999753 3446789999999999998864
No 103
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.7e-20 Score=132.12 Aligned_cols=114 Identities=26% Similarity=0.291 Sum_probs=94.2
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe-cCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh-
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMAD-RNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA- 99 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~- 99 (138)
+++|+++|||+++|||.++++.|+++|++|+++. ++.+..++...++... +.++..+.+|+++.+++..+++++.+
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999998875 5556666666666543 45678889999999999999988765
Q ss_pred ---cCC--CccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 ---RAL--PLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ---~~~--~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++ ++|+||||||... +..+.+.++|++++++|+.|++
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~ 124 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPF 124 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHH
Confidence 234 8999999999753 3456788999999999999876
No 104
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.85 E-value=1.6e-20 Score=132.76 Aligned_cols=116 Identities=22% Similarity=0.303 Sum_probs=100.9
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.++++|+++|||++++||.+++++|+++|++|++++|+.+..+.....+... +.++.++.+|++|+++++++++++.+
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~ 85 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLE 85 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999987777666666543 45678899999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||+|... +..+.+.+.|++.+++|+.+++
T Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 125 (259)
T PRK08213 86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLF 125 (259)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHH
Confidence 8899999999999753 3456788999999999998875
No 105
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.85 E-value=1.9e-20 Score=131.00 Aligned_cols=112 Identities=27% Similarity=0.393 Sum_probs=97.2
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++|+++|||++++||+++++.|+++|+.|++.+|+.+++++....+ +.++.++.+|+++.++++++++++.+.
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEAD 77 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999877766654433 346788899999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 116 (245)
T PRK12936 78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATF 116 (245)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHH
Confidence 999999999999864 3446788899999999998865
No 106
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.2e-20 Score=133.36 Aligned_cols=111 Identities=25% Similarity=0.271 Sum_probs=95.1
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+|+++|||++++||.+++++|+++|++|++++|+.+.+++...++... + ++.++.+|+++++++.++++++.+++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999999999987776655544321 2 7889999999999999999999999999
Q ss_pred ccEEEECcccCCC--CC-ccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICGT--PF-MLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~g~~ 137 (138)
+|++|||+|.... .. ..+.++|++.+++|+.|++
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~ 115 (257)
T PRK07024 79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMV 115 (257)
T ss_pred CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHH
Confidence 9999999998642 22 2678999999999999875
No 107
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=1.8e-20 Score=132.59 Aligned_cols=115 Identities=23% Similarity=0.310 Sum_probs=95.1
Q ss_pred CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEecC-----------cchhHHHHHHHHhcCCCCeeEEEEecCCCH
Q 042455 21 DAAGVTAIVTGAS--SGIGAETTRVLALRGVHVIMADRN-----------MAAGRDVKVAIVMQNPAAKVDVMELDLSSL 87 (138)
Q Consensus 21 ~~~~k~~litG~~--~~iG~~~a~~l~~~g~~v~~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 87 (138)
.+++|+++|||++ +|||+++|++|+++|++|+++++. .+...+...++... +.++..+++|+++.
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~ 80 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQN 80 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence 5789999999998 499999999999999999987642 11222333344433 56788999999999
Q ss_pred HHHHHHHHHHHhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 88 ASVRKFASDFTARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 88 ~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++++++++.+.++++|++|||||... +..+.+.++|++++++|+.+++
T Consensus 81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 132 (256)
T PRK12859 81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATT 132 (256)
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999763 4457899999999999999876
No 108
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.85 E-value=1.5e-20 Score=133.02 Aligned_cols=109 Identities=17% Similarity=0.157 Sum_probs=95.5
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
+++|||+++|||+++|++|+++|++|++++|+++..++...++... .++.++++|++|+++++++++++.++++++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 6999999999999999999999999999999988887777776543 3578899999999999999999999999999
Q ss_pred EEEECcccCC----CCCccCHHHHHHHhhhcccccc
Q 042455 106 ILINKAGICG----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 106 ~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+||||||... +..+.+.++|.+.+.+|+.+++
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 114 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPG 114 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHH
Confidence 9999999752 2446788999999999988764
No 109
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.85 E-value=1.2e-20 Score=133.79 Aligned_cols=109 Identities=28% Similarity=0.391 Sum_probs=94.3
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+.+++++|+++|||+++|||.++++.|+++|++|++++++....+ ..++.++++|++++++++++++++
T Consensus 3 ~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~ 71 (266)
T PRK06171 3 DWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEI 71 (266)
T ss_pred ccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHH
Confidence 345688999999999999999999999999999999998865432 235778899999999999999999
Q ss_pred HhcCCCccEEEECcccCCC-----------CCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICGT-----------PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~~-----------~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+.++++|++|||||...+ ..+.+.++|++++++|+.+++
T Consensus 72 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (266)
T PRK06171 72 IEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVF 122 (266)
T ss_pred HHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHH
Confidence 9999999999999997532 135788999999999999876
No 110
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2.5e-20 Score=132.87 Aligned_cols=117 Identities=22% Similarity=0.168 Sum_probs=100.7
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
+|++|+++|||++++||.++++.|+++|++|++++|+.+..+....++.....+.++.++.+|++++++++++++++.++
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999999999998777766666654432356888999999999999999999999
Q ss_pred CCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|..++++|+.+++
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 123 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTM 123 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 999999999999753 3446788999999999998875
No 111
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.85 E-value=2e-20 Score=131.25 Aligned_cols=114 Identities=19% Similarity=0.176 Sum_probs=95.2
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe-cCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMAD-RNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
|++|+++|||++++||++++++|+++|++|++.. ++....++...++... +.++..+.+|++|.++++++++++.+.
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999987754 4444444445555433 566888899999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (246)
T PRK12938 79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLF 117 (246)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 999999999999864 3456789999999999998865
No 112
>PRK05599 hypothetical protein; Provisional
Probab=99.85 E-value=1.3e-20 Score=132.69 Aligned_cols=111 Identities=18% Similarity=0.267 Sum_probs=94.9
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
++++||||++|||+++|++|+ +|++|++++|+.+++++..++++... ...+.++++|++|+++++++++++.+.+|++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999 59999999999988888888876552 2357889999999999999999999999999
Q ss_pred cEEEECcccCCC--CCccCHHHHHHHhhhcccccc
Q 042455 105 NILINKAGICGT--PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 105 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|++|||+|...+ ..+.+.+++.+++++|+.+++
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 113 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQV 113 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHH
Confidence 999999998643 235667778888999987764
No 113
>PLN00015 protochlorophyllide reductase
Probab=99.85 E-value=1.1e-20 Score=137.13 Aligned_cols=108 Identities=40% Similarity=0.591 Sum_probs=94.0
Q ss_pred EEeCCCCchHHHHHHHHHHCC-CEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 042455 28 IVTGASSGIGAETTRVLALRG-VHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNI 106 (138)
Q Consensus 28 litG~~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 106 (138)
+|||+++|||++++++|+++| ++|++++|+.+..++...++... +.++.++++|++|.++++++++++.+.++++|+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 589999999999999999999 99999999988777766665422 456888999999999999999999988899999
Q ss_pred EEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 107 LINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 107 lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
||||||+.. +..+.+.++|+++|++|+.|++
T Consensus 79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~ 112 (308)
T PLN00015 79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHF 112 (308)
T ss_pred EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHH
Confidence 999999863 2346789999999999999976
No 114
>PRK06182 short chain dehydrogenase; Validated
Probab=99.85 E-value=1.5e-20 Score=134.02 Aligned_cols=108 Identities=31% Similarity=0.378 Sum_probs=93.5
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
|++|+++|||+++|||+++++.|+++|++|++++|+.+++++.. . ..+.++.+|++|.++++++++++.+.+
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 72 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S----LGVHPLSLDVTDEASIKAAVDTIIAEE 72 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h----CCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence 35789999999999999999999999999999999877654432 1 236788999999999999999999999
Q ss_pred CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|||||... +..+.+.++|+..+++|+.|++
T Consensus 73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 110 (273)
T PRK06182 73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAA 110 (273)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHH
Confidence 99999999999863 4557889999999999998764
No 115
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2.7e-20 Score=131.92 Aligned_cols=113 Identities=24% Similarity=0.262 Sum_probs=98.4
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++++++||||+++||.+++++|+++|++|++++|+++..++...++ . . +.++.++.+|++|.++++++++.+.+
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~-~~~~~~~~~D~~d~~~~~~~~~~~~~- 77 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-Y-PGRHRWVVADLTSEAGREAVLARARE- 77 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-c-CCceEEEEccCCCHHHHHHHHHHHHh-
Confidence 467899999999999999999999999999999999988877766665 2 2 45788999999999999999999876
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||||... +..+.+.+++.+.+++|+.|++
T Consensus 78 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~ 116 (263)
T PRK09072 78 MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPM 116 (263)
T ss_pred cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHH
Confidence 789999999999763 3456788999999999998865
No 116
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2e-20 Score=133.47 Aligned_cols=111 Identities=23% Similarity=0.249 Sum_probs=96.2
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
|++|+++|||++++||++++++|+++|++|++++|+.+.+++....+ +..+..+++|++|++++.++++++.+.+
T Consensus 1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999987765544332 3457888999999999999999999999
Q ss_pred CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|||||... +..+.+.++|++++++|+.+++
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 113 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGAL 113 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHH
Confidence 99999999999874 4557889999999999999875
No 117
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.85 E-value=2.3e-20 Score=130.33 Aligned_cols=107 Identities=19% Similarity=0.218 Sum_probs=91.1
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+|+++|||+++|||++++++|+++|++|++++|+++...+ .+... + +.++.+|+++.++++++++++.+.+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~--~--~~~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID---GLRQA--G--AQCIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHHc--C--CEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 6899999999999999999999999999999998765432 22222 2 567899999999999999999999999
Q ss_pred ccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|++|||||... ...+.+.++|++++++|+.+++
T Consensus 75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~ 110 (236)
T PRK06483 75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPY 110 (236)
T ss_pred ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHH
Confidence 999999999753 2446788999999999999876
No 118
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=2.9e-20 Score=131.32 Aligned_cols=115 Identities=27% Similarity=0.307 Sum_probs=95.0
Q ss_pred CCCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEecCc-----------chhHHHHHHHHhcCCCCeeEEEEecCCCH
Q 042455 21 DAAGVTAIVTGASS--GIGAETTRVLALRGVHVIMADRNM-----------AAGRDVKVAIVMQNPAAKVDVMELDLSSL 87 (138)
Q Consensus 21 ~~~~k~~litG~~~--~iG~~~a~~l~~~g~~v~~~~r~~-----------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 87 (138)
.+++|+++||||++ |||.+++++|+++|++|++++|++ .....+..++... +.++.++.+|+++.
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~ 79 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQP 79 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence 46789999999994 999999999999999999999872 2222233334332 45789999999999
Q ss_pred HHHHHHHHHHHhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 88 ASVRKFASDFTARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 88 ~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++.++++++.+.++++|++|||||... +..+.+.++|++.+++|+.|++
T Consensus 80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 131 (256)
T PRK12748 80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATM 131 (256)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999763 4456788999999999998875
No 119
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.85 E-value=3.3e-20 Score=129.80 Aligned_cols=113 Identities=22% Similarity=0.267 Sum_probs=98.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
++|+++|||++++||+++++.|+++|++|++++|+++..++....+... +.++.++.+|+++++++.++++++.++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4589999999999999999999999999999999988777766666543 45788899999999999999999999999
Q ss_pred CccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 119 (241)
T PRK07454 83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVF 119 (241)
T ss_pred CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHH
Confidence 9999999999764 3346788999999999998865
No 120
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.85 E-value=3.6e-20 Score=130.50 Aligned_cols=114 Identities=28% Similarity=0.286 Sum_probs=100.6
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
|++|+++|||++++||.+++++|+++|++|++++|+.+..++...++... +.++..+.+|+++.++++++++++.+.+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999988877777666554 5678899999999999999999999999
Q ss_pred CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|+|+|... +..+.+.++++..+++|+.+++
T Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (258)
T PRK12429 80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAF 117 (258)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhH
Confidence 99999999999764 3446788899999999998865
No 121
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2e-20 Score=133.63 Aligned_cols=111 Identities=23% Similarity=0.298 Sum_probs=95.4
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
+.+|+++||||+++||.+++++|+++|++|++++|+.+..+.+... . +.++..+.+|++|.+++.++++++.+.+
T Consensus 2 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 2 SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred CCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence 3578999999999999999999999999999999987765543322 2 3467888999999999999999999999
Q ss_pred CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|||||... +..+.+.++|++++++|+.|++
T Consensus 77 ~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~ 114 (277)
T PRK06180 77 GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAV 114 (277)
T ss_pred CCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHH
Confidence 99999999999863 4557788999999999998875
No 122
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.85 E-value=1.1e-20 Score=137.76 Aligned_cols=114 Identities=23% Similarity=0.336 Sum_probs=91.9
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCC--HHHHHHHHHHHHh
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSS--LASVRKFASDFTA 99 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 99 (138)
..|++++||||++|||+++|++|+++|++|++++|+++++++..+++...+++.++..+.+|+++ .+.++.+.+.+.
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~- 129 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE- 129 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc-
Confidence 45899999999999999999999999999999999999988888888766555678889999985 333444443331
Q ss_pred cCCCccEEEECcccCC----CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
..++|++|||||+.. +..+.+.++|++++++|+.|++
T Consensus 130 -~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~ 170 (320)
T PLN02780 130 -GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTT 170 (320)
T ss_pred -CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHH
Confidence 124679999999863 2447889999999999999875
No 123
>PRK06720 hypothetical protein; Provisional
Probab=99.85 E-value=4.7e-20 Score=123.26 Aligned_cols=94 Identities=26% Similarity=0.357 Sum_probs=82.6
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+.+++|+++|||+++|||.++|+.|++.|++|++++|+.+..++...++... +.+..++.+|+++.++++++++++.+
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~ 89 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLN 89 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999887776666666543 45577889999999999999999999
Q ss_pred cCCCccEEEECcccCC
Q 042455 100 RALPLNILINKAGICG 115 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~ 115 (138)
.+|++|++|||||...
T Consensus 90 ~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 90 AFSRIDMLFQNAGLYK 105 (169)
T ss_pred HcCCCCEEEECCCcCC
Confidence 9999999999999864
No 124
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.85 E-value=4.4e-20 Score=129.24 Aligned_cols=115 Identities=29% Similarity=0.361 Sum_probs=97.5
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc-hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA-AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+.++|+++|||++++||+++++.|+++|++++++.++.+ ..++..+++... +.++.++.+|+++.++++++++++.+
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAET 79 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999988877644 344555555443 56789999999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 119 (245)
T PRK12937 80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAF 119 (245)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHH
Confidence 9999999999999763 3446788999999999998875
No 125
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2e-20 Score=132.31 Aligned_cols=109 Identities=25% Similarity=0.307 Sum_probs=94.1
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+..++++|+++|||+++|||.++++.|+++|++|++++|+++.. . ...+.++++|++|.++++++++++
T Consensus 3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~~~~~~~~~~~ 71 (260)
T PRK06523 3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L-----PEGVEFVAADLTTAEGCAAVARAV 71 (260)
T ss_pred cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c-----CCceeEEecCCCCHHHHHHHHHHH
Confidence 44568899999999999999999999999999999999985431 1 345788999999999999999999
Q ss_pred HhcCCCccEEEECcccCC----CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+.++++|++|||||... +..+.+.++|++.+++|+.|++
T Consensus 72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 115 (260)
T PRK06523 72 LERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAV 115 (260)
T ss_pred HHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHH
Confidence 999999999999999642 2346788999999999999875
No 126
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.85 E-value=3.4e-20 Score=131.94 Aligned_cols=111 Identities=20% Similarity=0.269 Sum_probs=98.7
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
|+++||||+++||++++++|+++|++|++++|+.+.+++...++... +.++.++++|+++++++..+++++.++++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999999999999988888877777654 5678889999999999999999999999999
Q ss_pred cEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 105 NILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 105 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|+||||+|... +..+.+.++|++++++|+.+++
T Consensus 79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 113 (270)
T PRK05650 79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVV 113 (270)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHH
Confidence 99999999864 3557788999999999998765
No 127
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.85 E-value=3.7e-20 Score=130.32 Aligned_cols=111 Identities=23% Similarity=0.336 Sum_probs=98.1
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
|+++|||++++||++++++|+++|++|++++|+.+..++...++... +.++.++.+|++|++++.++++++.++++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999977777766666544 5678899999999999999999999999999
Q ss_pred cEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 105 NILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 105 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 113 (254)
T TIGR02415 79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVL 113 (254)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHH
Confidence 99999999763 4457889999999999998865
No 128
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.84 E-value=2.9e-20 Score=146.85 Aligned_cols=119 Identities=29% Similarity=0.358 Sum_probs=103.1
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
...+.+|+++|||+++|||++++++|+++|++|++++|+.+..+.....+....+...+..+++|++|.++++++++++.
T Consensus 409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999988777766666544333467889999999999999999999
Q ss_pred hcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.+|++|++|||||... +..+.+.++|+..+++|+.+++
T Consensus 489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~ 529 (676)
T TIGR02632 489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYF 529 (676)
T ss_pred HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999763 3456789999999999998865
No 129
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.84 E-value=4.7e-20 Score=129.46 Aligned_cols=114 Identities=28% Similarity=0.297 Sum_probs=100.0
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
+++|+++||||+++||.+++++|+++|++|++++|+.+..+++...+... +.++.++.+|+++.++++++++++.+.+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999988777776666554 4568899999999999999999999999
Q ss_pred CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 116 (250)
T TIGR03206 79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGAL 116 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 99999999999753 3446788999999999998875
No 130
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.84 E-value=5.1e-20 Score=131.51 Aligned_cols=115 Identities=29% Similarity=0.318 Sum_probs=98.1
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
|++|+++||||+++||.++++.|+++|++|++++|+.+..++....+.....+.++.++.+|++|++++++ ++++.+.+
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 45789999999999999999999999999999999987777766555443324578899999999999999 99988889
Q ss_pred CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|||+|... ...+.+.++|++.+++|+.+++
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAI 117 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHH
Confidence 99999999999764 3346788999999999998865
No 131
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.84 E-value=6.9e-20 Score=131.92 Aligned_cols=115 Identities=21% Similarity=0.276 Sum_probs=97.5
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcch-hHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAA-GRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++|+++|||++++||.+++++|+++|++|++++|+.+. .+.....+... +.++.++.+|+++.++++++++++.+
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999998643 44444444332 46788999999999999999999999
Q ss_pred cCCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||||... +..+.+.++|.+.+++|+.+++
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~ 161 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYF 161 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHH
Confidence 9999999999999753 3446889999999999999875
No 132
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.84 E-value=2.7e-20 Score=132.31 Aligned_cols=105 Identities=35% Similarity=0.422 Sum_probs=91.7
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
++|+++||||+++||++++++|+++|++|++++|+.+..+. ...+.++++|++|+++++++++.+.++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence 57899999999999999999999999999999998654321 23477899999999999999999999999
Q ss_pred CccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|+||||+|... +..+.+.++|++++++|+.|++
T Consensus 73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~ 109 (270)
T PRK06179 73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGIL 109 (270)
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHH
Confidence 9999999999863 4456789999999999998865
No 133
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.84 E-value=5.7e-20 Score=129.54 Aligned_cols=113 Identities=26% Similarity=0.397 Sum_probs=95.5
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++.+|+++||||+++||.++++.|+++|++|++++|+.+.. +...++. +..+..+.+|++++++++++++++.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL----GGNAKGLVCDVSDSQSVEAAVAAVIS 85 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999987542 2222221 34577899999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||+|... +..+.+.++|++.+++|+.|++
T Consensus 86 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 125 (255)
T PRK06841 86 AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSF 125 (255)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHH
Confidence 9999999999999763 3446788999999999999875
No 134
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.84 E-value=4.5e-20 Score=125.00 Aligned_cols=109 Identities=22% Similarity=0.297 Sum_probs=96.4
Q ss_pred CCCEEEEeCCC-CchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh-c
Q 042455 23 AGVTAIVTGAS-SGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA-R 100 (138)
Q Consensus 23 ~~k~~litG~~-~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~ 100 (138)
..|.++|||++ ||||.+++++|.++|+.|+.+.|..+...++..+. .+..+.+|+++++++..+..+++. .
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-------gl~~~kLDV~~~~~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-------GLKPYKLDVSKPEEVVTVSGEVRANP 78 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-------CCeeEEeccCChHHHHHHHHHHhhCC
Confidence 35789999886 79999999999999999999999999887766432 378899999999999999999998 7
Q ss_pred CCCccEEEECcccC--CCCCccCHHHHHHHhhhccccccC
Q 042455 101 ALPLNILINKAGIC--GTPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 101 ~~~id~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
+|++|+|+||||.. .|..+.+.+..++.|++|++|+++
T Consensus 79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~ir 118 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIR 118 (289)
T ss_pred CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeeh
Confidence 89999999999987 467789999999999999999763
No 135
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.84 E-value=9.2e-20 Score=130.12 Aligned_cols=115 Identities=25% Similarity=0.315 Sum_probs=99.1
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+..|+++||||+++||++++++|+++|++|++++|+.+..++...++... +.++.++.+|+++++++.++++++.+.
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 466789999999999999999999999999999999877766665555443 457888999999999999999999888
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||||... +..+.+.+.|++.+++|+.|++
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 123 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGAN 123 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHH
Confidence 899999999999764 3446788999999999998875
No 136
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.84 E-value=7.6e-20 Score=129.21 Aligned_cols=115 Identities=29% Similarity=0.421 Sum_probs=99.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVH-VIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.+++|+++|||++++||..++++|+++|++ |++++|+.+.......++... +.++.++.+|+++++++.++++.+.+
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADE 80 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 478899999999999999999999999998 999999877766665555433 56788899999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++++|++|||+|... +..+.+.++|+.++++|+.+++
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 120 (260)
T PRK06198 81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPF 120 (260)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 9999999999999764 2346789999999999998865
No 137
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.84 E-value=9.2e-20 Score=127.93 Aligned_cols=115 Identities=24% Similarity=0.340 Sum_probs=96.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEec-CcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADR-NMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++.+|+++|||++++||.+++++|+++|++|+++.+ +++..++....+... +.++.++++|+++++++.++++++.+
T Consensus 3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (247)
T PRK12935 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVN 80 (247)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999887654 445555555555443 46789999999999999999999999
Q ss_pred cCCCccEEEECcccCCC--CCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICGT--PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||||...+ ..+.+.+.+++.+++|+.+++
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 120 (247)
T PRK12935 81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVF 120 (247)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 99999999999998643 336788999999999999875
No 138
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.84 E-value=1e-19 Score=127.71 Aligned_cols=115 Identities=21% Similarity=0.251 Sum_probs=99.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++++++|||++++||.++++.|+++|++|++++|+.++.++..+++... +.++.++++|+++.++++++++.+.+.
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999988777776666554 467888999999999999999999888
Q ss_pred CCCccEEEECcccCCCC-----------CccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICGTP-----------FMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~~-----------~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|...+. .+.+.++|..++++|+.|++
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 127 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVF 127 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHH
Confidence 89999999999975321 35678899999999998875
No 139
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.84 E-value=7.9e-20 Score=127.83 Aligned_cols=116 Identities=22% Similarity=0.259 Sum_probs=99.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCC--HHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSS--LASVRKFASDFT 98 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~ 98 (138)
+|++|+++|||++++||.+++++|+++|++|++++|+++..++...++.... +..+..+.+|+++ .+++.++++++.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i~ 81 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATIA 81 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHHH
Confidence 4778999999999999999999999999999999999988777777665432 3456788999975 578999999998
Q ss_pred hcC-CCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARA-LPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~-~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.+ +++|++|||||... +..+.+.++|.+.+++|+.|++
T Consensus 82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~ 124 (239)
T PRK08703 82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPM 124 (239)
T ss_pred HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHH
Confidence 888 88999999999753 4557889999999999999875
No 140
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.84 E-value=6.7e-20 Score=130.63 Aligned_cols=112 Identities=27% Similarity=0.358 Sum_probs=96.6
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
|+++||||++|||.++++.|+++|++|++++|+.+..++...++.... +..+.++.+|+++++++.++++++.+.++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 579999999999999999999999999999999887777766665442 2335667999999999999999999999999
Q ss_pred cEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 105 NILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 105 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|++|||+|... +..+.+.++|++.+++|+.|++
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 114 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPI 114 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHH
Confidence 99999999753 4557899999999999999875
No 141
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.83 E-value=8e-20 Score=129.27 Aligned_cols=109 Identities=27% Similarity=0.258 Sum_probs=94.9
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc-CCC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR-ALP 103 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 103 (138)
|+++||||+++||+++++.|+++|++|++++|+.+..++....+. +.++.++++|+++.+++.++++++.++ +++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 789999999999999999999999999999999887766655442 457889999999999999999988776 789
Q ss_pred ccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|+||||||... +..+.+.+++++++++|+.+++
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 113 (260)
T PRK08267 78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVL 113 (260)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHH
Confidence 999999999864 3446788999999999998875
No 142
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.83 E-value=1e-19 Score=127.99 Aligned_cols=112 Identities=18% Similarity=0.236 Sum_probs=92.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecC-cchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRN-MAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++|+++||||+++||+++++.|+++|++|+++.++ .+..+.+..++ +.++.++.+|++++++++++++++.+
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATATE 76 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999887654 33344333322 34688899999999999999999988
Q ss_pred cCCC-ccEEEECcccCC--------CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALP-LNILINKAGICG--------TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~-id~lv~~ag~~~--------~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+++ +|++|||||... +..+.+.++|.+.+++|+.+++
T Consensus 77 ~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 123 (253)
T PRK08642 77 HFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123 (253)
T ss_pred HhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHH
Confidence 8887 999999998631 2346788999999999999875
No 143
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.83 E-value=9.5e-20 Score=127.84 Aligned_cols=112 Identities=31% Similarity=0.338 Sum_probs=94.1
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEec-CcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADR-NMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
+|+++|||++++||.+++++|+++|++|+++.+ +++..++....+... +.++.++.+|++|.++++++++++.++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999999888764 444455555555443 45678899999999999999999999999
Q ss_pred CccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++|||+|... +..+.+.++|++++++|+.+++
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (248)
T PRK06123 80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSF 117 (248)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 9999999999864 2346788999999999999875
No 144
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.83 E-value=1.3e-19 Score=127.39 Aligned_cols=115 Identities=33% Similarity=0.471 Sum_probs=96.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcch--hHHHHHHHHhcCCC-CeeEEEEecCCC-HHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAA--GRDVKVAIVMQNPA-AKVDVMELDLSS-LASVRKFASD 96 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~ 96 (138)
++.+|+++|||+++|||+++|+.|+++|++|+++.++.+. .+....... ..+ ..+.+..+|+++ .++++.+++.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~ 79 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAA 79 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence 5678999999999999999999999999998888887664 333333332 112 368888999998 9999999999
Q ss_pred HHhcCCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 97 FTARALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 97 ~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+...+|++|++|||||... +..+.+.++|++++++|+.|++
T Consensus 80 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~ 123 (251)
T COG1028 80 AEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAF 123 (251)
T ss_pred HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHH
Confidence 9999999999999999874 5667889999999999998765
No 145
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.5e-19 Score=126.13 Aligned_cols=114 Identities=25% Similarity=0.325 Sum_probs=99.3
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+.+++++||||+++||.+++++|+++|++|++++|++++.++...++... .++.++.+|+++.+++.++++++.+.
T Consensus 3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (237)
T PRK07326 3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAA 79 (237)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999988777766666432 46888999999999999999999998
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++||++|... +..+.+.+++++.+++|+.+++
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 118 (237)
T PRK07326 80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAF 118 (237)
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHH
Confidence 999999999999763 3456788999999999998875
No 146
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.83 E-value=1.3e-19 Score=128.19 Aligned_cols=112 Identities=28% Similarity=0.369 Sum_probs=94.7
Q ss_pred EEEEeCCCCchHHHHHHHHHH----CCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 26 TAIVTGASSGIGAETTRVLAL----RGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
+++|||+++|||+++|++|++ +|++|++++|+.+.+++...++....++.++.++.+|+++.++++++++++.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 7999999999998888888777654445678899999999999999999998877
Q ss_pred CCc----cEEEECcccCCC---CC-c-cCHHHHHHHhhhcccccc
Q 042455 102 LPL----NILINKAGICGT---PF-M-LSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~i----d~lv~~ag~~~~---~~-~-~~~~~~~~~~~~n~~g~~ 137 (138)
+++ |+||||||.... .. + .+.++|+++|++|+.|++
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~ 126 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSML 126 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHH
Confidence 653 699999997532 12 2 357899999999999876
No 147
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.83 E-value=1.8e-19 Score=126.38 Aligned_cols=115 Identities=25% Similarity=0.291 Sum_probs=100.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++.+|+++||||+++||.++++.|+++|++|++++|+.++..+....+... +.++.++.+|++|.++++++++++..+
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVED 80 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999987777766666544 456889999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++||++|... +..+.+.++|.+.+++|+.+++
T Consensus 81 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 119 (251)
T PRK12826 81 FGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTF 119 (251)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 999999999999764 3346788999999999998764
No 148
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.7e-19 Score=127.01 Aligned_cols=115 Identities=30% Similarity=0.379 Sum_probs=95.9
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-ecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMA-DRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++++++|||++++||.++|+.|+++|++|+++ .|+.+..++....+... +.++.++++|++|.+++.++++++.+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999998774 67776666666555433 45688899999999999999999887
Q ss_pred cC------CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RA------LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~------~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++ +++|++|||+|... +..+.+.+.|+..+++|+.+++
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 126 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPF 126 (254)
T ss_pred HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 76 57999999999763 3446788999999999998865
No 149
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.83 E-value=2.1e-19 Score=126.20 Aligned_cols=112 Identities=29% Similarity=0.343 Sum_probs=94.7
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe-cCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMAD-RNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.|+++||||+++||.++++.|+++|++|+++. |+.+..+....++... +.++.++.+|+++.++++++++++.+.++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999988765 5656666665555443 45788999999999999999999998899
Q ss_pred CccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++|||||... +..+.+.++|..++++|+.+++
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (248)
T PRK06947 80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAY 117 (248)
T ss_pred CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHH
Confidence 9999999999763 2346788999999999999875
No 150
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.2e-19 Score=129.74 Aligned_cols=107 Identities=21% Similarity=0.291 Sum_probs=91.0
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC-
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA- 101 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 101 (138)
.+|+++||||++|||+++++.|+++|++|++++|+.+.++++. . ..+.++.+|++|.++++++++++.+.+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 74 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----A----EGLEAFQLDYAEPESIAALVAQVLELSG 74 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----H----CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999999977655432 1 136788999999999999999987765
Q ss_pred CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|||||... +..+.+.++|+.++++|+.|++
T Consensus 75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~ 112 (277)
T PRK05993 75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWH 112 (277)
T ss_pred CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHH
Confidence 68999999999763 4456889999999999998864
No 151
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.9e-19 Score=127.12 Aligned_cols=110 Identities=25% Similarity=0.305 Sum_probs=93.5
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.|++|+++||||+++||.++++.|+++|++|++++|+....++...++ . ..++++|++++++++++++++.+.
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~ 76 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----G--GLFVPTDVTDEDAVNALFDTAAET 76 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C--CcEEEeeCCCHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999876655544433 1 247799999999999999999988
Q ss_pred CCCccEEEECcccCC----CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.+.|++.+++|+.|++
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (255)
T PRK06057 77 YGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVY 117 (255)
T ss_pred cCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHH
Confidence 899999999999753 2335788999999999998875
No 152
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.82 E-value=2.7e-20 Score=134.56 Aligned_cols=120 Identities=14% Similarity=0.167 Sum_probs=84.5
Q ss_pred cCCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHH--------hcCCCC-----eeEEEEe
Q 042455 18 QGIDAAGVTAIVTGAS--SGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIV--------MQNPAA-----KVDVMEL 82 (138)
Q Consensus 18 ~~~~~~~k~~litG~~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~--------~~~~~~-----~~~~~~~ 82 (138)
+.+++++|+++|||++ +|||+++|+.|+++|++|++.++.+ .++...+.+. ....+. ++..+.+
T Consensus 2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (299)
T PRK06300 2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA 80 (299)
T ss_pred CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence 3456899999999996 9999999999999999999977541 0100000000 000011 1111223
Q ss_pred cCCCH------------------HHHHHHHHHHHhcCCCccEEEECcccC----CCCCccCHHHHHHHhhhccccccC
Q 042455 83 DLSSL------------------ASVRKFASDFTARALPLNILINKAGIC----GTPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 83 D~~~~------------------~~~~~~~~~~~~~~~~id~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
|+++. ++++++++++.+++|++|+||||||.. .+..+.+.++|++++++|+.|+|+
T Consensus 81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~ 158 (299)
T PRK06300 81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVS 158 (299)
T ss_pred hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 33322 468999999999999999999999864 345578999999999999998863
No 153
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.82 E-value=2.2e-19 Score=125.68 Aligned_cols=115 Identities=28% Similarity=0.388 Sum_probs=99.4
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-ecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMA-DRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++|+++|||++++||.++++.|+++|++|+++ +|+.+..+.....+... +.++.++.+|+++.+++.++++++.+
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999998 89887776666666543 45688999999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|+++|... +..+.+.++|++.+++|+.+++
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 119 (247)
T PRK05565 80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVM 119 (247)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 8999999999999863 3346788999999999998864
No 154
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.82 E-value=2.6e-19 Score=126.16 Aligned_cols=112 Identities=23% Similarity=0.292 Sum_probs=94.4
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc-hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA-AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
+|+++|||++++||.+++++|+++|++|++++|+.. ..++....+... +.++.++.+|+++++++.++++++.+.++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 589999999999999999999999999999998643 344444444433 45688999999999999999999999999
Q ss_pred CccEEEECcccCC----CCCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICG----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 118 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPF 118 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHH
Confidence 9999999999753 2446788999999999999875
No 155
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.6e-19 Score=129.06 Aligned_cols=105 Identities=26% Similarity=0.325 Sum_probs=89.4
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+|+++|||+ +|||+++|++|+ +|++|++++|+.+.+++..+++... +.++.++++|++|++++.++++++ +++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~ 76 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGP 76 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence 689999998 699999999996 8999999999987777766666543 457889999999999999999988 56899
Q ss_pred ccEEEECcccCCCCCccCHHHHHHHhhhccccccC
Q 042455 104 LNILINKAGICGTPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 104 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
+|+||||||+.. ..++|++++++|+.|+++
T Consensus 77 id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~ 106 (275)
T PRK06940 77 VTGLVHTAGVSP-----SQASPEAILKVDLYGTAL 106 (275)
T ss_pred CCEEEECCCcCC-----chhhHHHHHHHhhHHHHH
Confidence 999999999742 246789999999998763
No 156
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.2e-19 Score=126.99 Aligned_cols=113 Identities=17% Similarity=0.134 Sum_probs=93.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEecCcch-hHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRG-VHVIMADRNMAA-GRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g-~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+|+++||||++|||+++|++|+++| ++|++++|++++ +++..+++.... ..++.++++|++|.+++.++++++.+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~- 84 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA- 84 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-
Confidence 47899999999999999999999995 899999999886 777777776542 34688999999999999999999876
Q ss_pred CCCccEEEECcccCCCCC--ccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICGTPF--MLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~g~~ 137 (138)
.+++|++|||+|...+.. ..+.++..+++++|+.+++
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~ 123 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAV 123 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHH
Confidence 489999999999865322 2244556678999999875
No 157
>PRK09135 pteridine reductase; Provisional
Probab=99.82 E-value=3.6e-19 Score=124.70 Aligned_cols=115 Identities=19% Similarity=0.228 Sum_probs=95.4
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc-hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA-AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
+.+++++|||++++||+.++++|+++|++|++++|+.+ ..+.....+.... ...+.++.+|+++.+++.++++++.+.
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVAA 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999998643 3444444444332 345888999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.+++++.+++|+.|++
T Consensus 83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~ 121 (249)
T PRK09135 83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPF 121 (249)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHH
Confidence 999999999999764 3345678899999999998875
No 158
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.82 E-value=3.3e-19 Score=124.52 Aligned_cols=115 Identities=30% Similarity=0.395 Sum_probs=99.5
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
+|.+|+++|||++++||..+++.|+++|++|++++|++++.+.....+... +.++.++.+|+++.+++.++++++...
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 466789999999999999999999999999999999988777666666544 567889999999999999999999888
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|+++|... +..+.+.++|.+.++.|+.+++
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 118 (246)
T PRK05653 80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTF 118 (246)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 899999999999764 3446788899999999988764
No 159
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.1e-19 Score=128.23 Aligned_cols=109 Identities=29% Similarity=0.333 Sum_probs=93.5
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
.|++|||||+++||.+++++|+++|++|++++|+.+..+++.... +.++.++++|++|.++++++++++.+.+++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999999876655544332 346888999999999999999999888899
Q ss_pred ccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|+||||||... +..+.+.++|++.+++|+.+++
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~ 112 (276)
T PRK06482 77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSI 112 (276)
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHH
Confidence 999999999863 3446788899999999998875
No 160
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.7e-19 Score=128.55 Aligned_cols=105 Identities=24% Similarity=0.337 Sum_probs=90.8
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
|+++||||++|||.+++++|+++|++|++++|+.+..+... . ..+.++.+|+++.++++++++++.+.++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 73 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A----AGFTAVQLDVNDGAALARLAEELEAEHGGL 73 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 78999999999999999999999999999999876554322 1 125678999999999999999999999999
Q ss_pred cEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 105 NILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 105 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|++|||||... +..+.+.++|++.+++|+.|++
T Consensus 74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~ 108 (274)
T PRK05693 74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVV 108 (274)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH
Confidence 99999999763 4557789999999999999875
No 161
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.82 E-value=2.6e-19 Score=126.02 Aligned_cols=107 Identities=24% Similarity=0.377 Sum_probs=93.2
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
+++|||++++||.++++.|+++|++|++++|+++.+++....+ +.++.++.+|+++.++++++++++.+.++++|
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999999999987766554433 34688899999999999999999999899999
Q ss_pred EEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 106 ILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 106 ~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|||+|... +..+.+.++|++++++|+.|++
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 111 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLV 111 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 9999999752 3456789999999999998865
No 162
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.82 E-value=3.2e-19 Score=125.34 Aligned_cols=116 Identities=22% Similarity=0.232 Sum_probs=99.2
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCC--CHHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLS--SLASVRKFASDFT 98 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~ 98 (138)
.+++|+++|||++++||.+++++|++.|++|++++|+.+..++...++.... ..++.++.+|++ +++++.++++.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999888777777765542 345677788886 7899999999999
Q ss_pred hcCCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.++++|++|||||... +..+.+.+.|++.+++|+.|++
T Consensus 88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~ 129 (247)
T PRK08945 88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATF 129 (247)
T ss_pred HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHH
Confidence 99999999999999763 3456788999999999998865
No 163
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.82 E-value=3.7e-19 Score=123.86 Aligned_cols=114 Identities=21% Similarity=0.232 Sum_probs=97.1
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+.+++|+++|||++++||.+++++|+++|++|++++|+.++..+...++.. ..+..+.+|++|.++++++++++.+
T Consensus 3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (239)
T PRK12828 3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA----DALRIGGIDLVDPQAARRAVDEVNR 78 (239)
T ss_pred CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh----cCceEEEeecCCHHHHHHHHHHHHH
Confidence 357799999999999999999999999999999999998776666555543 2356778999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|+++|... +..+.+.++|.+.+++|+.+++
T Consensus 79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 118 (239)
T PRK12828 79 QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTL 118 (239)
T ss_pred HhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHH
Confidence 9999999999999763 2345688899999999988764
No 164
>PRK07069 short chain dehydrogenase; Validated
Probab=99.82 E-value=3.1e-19 Score=125.32 Aligned_cols=111 Identities=23% Similarity=0.254 Sum_probs=93.6
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecC-cchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRN-MAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
++|||++++||.++++.|+++|++|++++|+ .+.+++...++........+..+++|+++.++++++++++.++++++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999999999999999999998 556666665554443233466789999999999999999999999999
Q ss_pred EEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 106 ILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 106 ~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|||+|... +..+.+.++|.+++++|+.+++
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 115 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIF 115 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 9999999763 3456788999999999998764
No 165
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.82 E-value=3e-19 Score=125.54 Aligned_cols=107 Identities=33% Similarity=0.446 Sum_probs=93.7
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++.+|+++|||++++||.+++++|+++|++|++++|+. +... +.++.++++|+++.++++++++++.+
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLLA 72 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 568899999999999999999999999999999999975 1111 45688899999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++++|++|||+|... +..+.+.++|.+.+++|+.+++
T Consensus 73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 112 (252)
T PRK08220 73 ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAF 112 (252)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 9999999999999763 4456788999999999998865
No 166
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.82 E-value=3.4e-19 Score=126.20 Aligned_cols=112 Identities=29% Similarity=0.327 Sum_probs=97.6
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+++++|||++++||.++++.|+++|++|++++|+++..++..+++... +.++.++.+|++|.+++.++++++.+++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999999999987777776666554 457888999999999999999999999999
Q ss_pred ccEEEECcccCC--CCCcc-CHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG--TPFML-SKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~-~~~~~~~~~~~n~~g~~ 137 (138)
+|++|||+|... +..+. +.++|.+.+++|+.+++
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~ 115 (263)
T PRK06181 79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAV 115 (263)
T ss_pred CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHH
Confidence 999999999764 23355 88899999999998875
No 167
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=8.2e-19 Score=123.28 Aligned_cols=116 Identities=19% Similarity=0.206 Sum_probs=95.1
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecC-cchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRN-MAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
+++.+++++||||+++||.+++++|+++|++|++..|+ .+........+... +.++..+.+|+++.+++.++++++.
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATI 79 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999998887754 33444444444433 4567889999999999999999999
Q ss_pred hcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.++++|++|||+|... +..+.+.+.|++.+++|+.+++
T Consensus 80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 120 (252)
T PRK06077 80 DRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVI 120 (252)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHH
Confidence 99999999999999753 3446788889999999998764
No 168
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.81 E-value=6.5e-19 Score=123.42 Aligned_cols=115 Identities=26% Similarity=0.284 Sum_probs=95.3
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecC----cchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRN----MAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASD 96 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 96 (138)
++.+++++||||+++||+++|+.|+++|++|++++|. .+..++...++... +.++.++.+|+++.+++++++++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~ 80 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDA 80 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Confidence 3567899999999999999999999999999887653 33344444444433 45788999999999999999999
Q ss_pred HHhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 97 FTARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 97 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+.+.++++|++|||+|... +..+.+.++|.+.+++|+.+++
T Consensus 81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 123 (249)
T PRK12827 81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFF 123 (249)
T ss_pred HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHH
Confidence 9988899999999999864 3456788999999999998875
No 169
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.81 E-value=8.1e-19 Score=122.87 Aligned_cols=111 Identities=32% Similarity=0.400 Sum_probs=94.9
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEE-ecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMA-DRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
|+++||||+++||.+++++|+++|++|+++ .|+.+..++...++... +.++..+++|++|+++++++++++.+++++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999998764 67766666666666544 456888999999999999999999989999
Q ss_pred ccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|++|||+|... +..+.+.++|+..+++|+.+++
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 116 (247)
T PRK09730 80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYF 116 (247)
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHH
Confidence 999999999753 3446788999999999999875
No 170
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.81 E-value=4.7e-19 Score=139.58 Aligned_cols=115 Identities=28% Similarity=0.289 Sum_probs=99.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++|+++||||++|||++++++|+++|++|++++|+++.+++...++... +.++.++.+|++|.++++++++++.++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999999988888777777554 467889999999999999999999999
Q ss_pred CCCccEEEECcccCCC--CCc--cCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICGT--PFM--LSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~--~~~--~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||||.... ..+ ...++|++++++|+.|++
T Consensus 446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 486 (657)
T PRK07201 446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAV 486 (657)
T ss_pred cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHH
Confidence 9999999999997532 112 235789999999998875
No 171
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.81 E-value=1.3e-18 Score=121.55 Aligned_cols=115 Identities=28% Similarity=0.356 Sum_probs=96.1
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcch-hHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAA-GRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++|+++|||++++||++++++|+++|++|+++.|+... .+.....+... +.++.++.+|+++.+++.++++++.+
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999888876553 44444444433 46788999999999999999999999
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++||++|... +..+.+.+.+.+.+.+|+.+++
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 119 (248)
T PRK05557 80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVF 119 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 8999999999999764 3346788999999999998764
No 172
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1e-18 Score=123.58 Aligned_cols=114 Identities=29% Similarity=0.355 Sum_probs=97.0
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.++++|+++||||+++||..++++|+++|++|++++|+.+..++...... ..++..+.+|+++++++..+++++.+
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVE 82 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHH
Confidence 34788999999999999999999999999999999998776655444332 23578899999999999999999999
Q ss_pred cCCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|+|||++|... +....+.++|.+++++|+.+++
T Consensus 83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 123 (264)
T PRK12829 83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQF 123 (264)
T ss_pred HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHH
Confidence 8999999999999762 2346788999999999998865
No 173
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.1e-18 Score=123.09 Aligned_cols=110 Identities=26% Similarity=0.274 Sum_probs=95.8
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+|+++|||++++||.++++.|+++|++|++++|+.+..+.....+. +.++.++.+|+++.+++..+++++.+++++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999999999999877766655552 456888999999999999999999999999
Q ss_pred ccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|++|+|+|... +..+.+.++|.+.+.+|+.+++
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 113 (257)
T PRK07074 78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAY 113 (257)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 999999999864 3346788999999999998765
No 174
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.80 E-value=7.2e-19 Score=125.00 Aligned_cols=112 Identities=19% Similarity=0.228 Sum_probs=86.5
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecC-cchhHHHHHHHHhcCCCCeeEEEEecCCCHHHH----HHHHHHHHh
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRN-MAAGRDVKVAIVMQNPAAKVDVMELDLSSLASV----RKFASDFTA 99 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~----~~~~~~~~~ 99 (138)
++++||||++|||+++++.|+++|++|++++|. ++.+++..+++.... +.++..+.+|++|.+++ +++++++.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence 579999999999999999999999999988654 556666666664332 34577789999999865 566666677
Q ss_pred cCCCccEEEECcccCC--CCCccCH-----------HHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSK-----------DNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~-----------~~~~~~~~~n~~g~~ 137 (138)
.++++|+||||||... +..+.+. ++|.+++++|+.++|
T Consensus 81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~ 131 (267)
T TIGR02685 81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPY 131 (267)
T ss_pred ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHH
Confidence 8899999999999753 2222222 358999999998876
No 175
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.80 E-value=1e-18 Score=122.04 Aligned_cols=109 Identities=24% Similarity=0.296 Sum_probs=92.7
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecC-cchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRN-MAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
++|||++++||+++|+.|+++|++|++++|. .+..+....++... +.++.++.+|+++.++++++++++.+.++++|
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999888865 34455555666544 45788999999999999999999999999999
Q ss_pred EEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 106 ILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 106 ~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|+|+|... +..+.+.++|+.++++|+.+++
T Consensus 79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 112 (239)
T TIGR01831 79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFY 112 (239)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHH
Confidence 9999999864 3346788999999999998875
No 176
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.80 E-value=2.2e-18 Score=120.38 Aligned_cols=111 Identities=25% Similarity=0.254 Sum_probs=93.0
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEec-CcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADR-NMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
|+++|||++++||.+++++|+++|++|+++.| +.+..++...++... +.++.++.+|++++++++++++++.+.+++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999888 554455444444332 457889999999999999999999999999
Q ss_pred ccEEEECcccCCC--CCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICGT--PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|++|||+|...+ ..+.+.++|++.+.+|+.+++
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 114 (242)
T TIGR01829 79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVF 114 (242)
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 9999999997642 346788999999999988764
No 177
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.80 E-value=1.8e-18 Score=121.00 Aligned_cols=112 Identities=26% Similarity=0.290 Sum_probs=92.9
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcch-hHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAA-GRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.|+++|||++++||+++|+.|+++|++|++++|+.+. .++....+.. .+.++.++.+|+++.+++.++++++.++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999998542 2222222221 145688999999999999999999999999
Q ss_pred CccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 116 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVF 116 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHH
Confidence 9999999999863 3457789999999999998865
No 178
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.79 E-value=1.3e-19 Score=119.36 Aligned_cols=110 Identities=28% Similarity=0.346 Sum_probs=94.8
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.++.|+.+++||+.-|||+++++.|++.|+.|+.+.|+++.+..+.++ . ...+..++.|+++++.+.+.+..
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e----~-p~~I~Pi~~Dls~wea~~~~l~~--- 74 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE----T-PSLIIPIVGDLSAWEALFKLLVP--- 74 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh----C-CcceeeeEecccHHHHHHHhhcc---
Confidence 357899999999999999999999999999999999999887776654 2 34488999999998777666554
Q ss_pred cCCCccEEEECcccC--CCCCccCHHHHHHHhhhccccccC
Q 042455 100 RALPLNILINKAGIC--GTPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 100 ~~~~id~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
.+++|.+|||||+. +|+.+.+.+.|++.|++|+.++++
T Consensus 75 -v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~ 114 (245)
T KOG1207|consen 75 -VFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVIL 114 (245)
T ss_pred -cCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeee
Confidence 47999999999986 688899999999999999998764
No 179
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.79 E-value=2.8e-18 Score=120.63 Aligned_cols=112 Identities=27% Similarity=0.295 Sum_probs=96.4
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+|++||||++++||.+++++|+++|++|++++|+.+..+.+...+... +.++.++.+|+++.++++++++++.+.+++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999987777666665443 457889999999999999999999988899
Q ss_pred ccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|++|+++|... +..+.+.+++++++++|+.|++
T Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~ 114 (255)
T TIGR01963 79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAF 114 (255)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH
Confidence 999999999764 2345678889999999988754
No 180
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.79 E-value=6.7e-19 Score=125.04 Aligned_cols=113 Identities=26% Similarity=0.326 Sum_probs=93.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.|++++||||++|||++.|++|+++|.+|++++|++++++...+++.+.++ .++..+.+|+++.+.+-.-+.+.... .
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~~-~ 125 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLAG-L 125 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhcC-C
Confidence 469999999999999999999999999999999999999999999998885 89999999999877733333332222 4
Q ss_pred CccEEEECcccCC--C--CCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICG--T--PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~--~--~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.|-+||||+|... | +.+.+...+...+.+|+++++
T Consensus 126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~ 164 (312)
T KOG1014|consen 126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVT 164 (312)
T ss_pred ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHH
Confidence 7899999999875 3 225566688999999998864
No 181
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.78 E-value=3.6e-18 Score=119.70 Aligned_cols=109 Identities=23% Similarity=0.276 Sum_probs=93.2
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
|+++||||+++||+++++.|+++|++|++++|+++..+....++.... +.++.++++|++++++++++++++.+ ++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPA---LP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence 689999999999999999999999999999999887777666665442 46789999999999999999998765 46
Q ss_pred cEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 105 NILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 105 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|++|+|+|... +..+.+.+++.+.+++|+.+++
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 112 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPI 112 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHH
Confidence 99999999764 3346788999999999998865
No 182
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.78 E-value=2e-18 Score=119.61 Aligned_cols=116 Identities=28% Similarity=0.384 Sum_probs=102.0
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-----EEEEEecCcchhHHHHHHHHhcCC--CCeeEEEEecCCCHHHHHHHHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-----HVIMADRNMAAGRDVKVAIVMQNP--AAKVDVMELDLSSLASVRKFAS 95 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-----~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~ 95 (138)
..|+++|||+++|||+++|++|++... .+++++|+-+++++....+++-+| ..++.++++|+++..++.++..
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 468999999999999999999998632 578889999999999999999988 5678889999999999999999
Q ss_pred HHHhcCCCccEEEECcccCC-----------------------CC------CccCHHHHHHHhhhccccccC
Q 042455 96 DFTARALPLNILINKAGICG-----------------------TP------FMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 96 ~~~~~~~~id~lv~~ag~~~-----------------------~~------~~~~~~~~~~~~~~n~~g~~~ 138 (138)
++.++|.++|.++.|||.+. |. ...+.|++..+|++|++|+|+
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfy 153 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFY 153 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhh
Confidence 99999999999999999851 11 125778899999999999984
No 183
>PRK08324 short chain dehydrogenase; Validated
Probab=99.78 E-value=3.6e-18 Score=135.31 Aligned_cols=114 Identities=26% Similarity=0.311 Sum_probs=100.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+.+|+++||||+++||+++++.|+++|++|++++|+.+..+.....+... ..+.++.+|+++.++++++++++.+.
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~ 495 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA 495 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999988777666655332 36889999999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|++|++|||||... +..+.+.++|++.+++|+.|++
T Consensus 496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~ 534 (681)
T PRK08324 496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHF 534 (681)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 999999999999763 4457899999999999998865
No 184
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.78 E-value=7.3e-18 Score=117.80 Aligned_cols=115 Identities=24% Similarity=0.330 Sum_probs=93.8
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcch-hHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAA-GRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.+.+|+++||||+++||.+++++|+++|++|+++.|+... .+.....+... +.++.++.+|+++.+++.++++++.+
T Consensus 3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (249)
T PRK12825 3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVE 80 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHH
Confidence 3556899999999999999999999999998786666544 33344444433 45688999999999999999999988
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++||++|... +..+.+.++|.+.+++|+.+++
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 120 (249)
T PRK12825 81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVF 120 (249)
T ss_pred HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 8899999999999763 2346788999999999988764
No 185
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.8e-18 Score=121.90 Aligned_cols=104 Identities=20% Similarity=0.239 Sum_probs=81.3
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
...+++|+++||||++|||+++++.|+++|++|++++|+.....+ . . .. .. ...+.+|+++.+++++
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~-~-~~--~~-~~~~~~D~~~~~~~~~------ 75 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--S-N-DE--SP-NEWIKWECGKEESLDK------ 75 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--h-h-cc--CC-CeEEEeeCCCHHHHHH------
Confidence 345789999999999999999999999999999999998632111 1 1 11 11 2567899999987753
Q ss_pred hcCCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.++++|++|||||... ..+.+.++|++.+++|+.|++
T Consensus 76 -~~~~iDilVnnAG~~~-~~~~~~~~~~~~~~vN~~g~~ 112 (245)
T PRK12367 76 -QLASLDVLILNHGINP-GGRQDPENINKALEINALSSW 112 (245)
T ss_pred -hcCCCCEEEECCccCC-cCCCCHHHHHHHHHHHhHHHH
Confidence 3468999999999743 345688999999999999876
No 186
>PRK12742 oxidoreductase; Provisional
Probab=99.78 E-value=4.2e-18 Score=118.74 Aligned_cols=106 Identities=24% Similarity=0.329 Sum_probs=84.7
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecC-cchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRN-MAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.+++|+++||||+++||+++++.|+++|++|+++++. .+..+++..++ + +.++.+|++|.+++.+++++
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~--~~~~~~D~~~~~~~~~~~~~--- 72 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----G--ATAVQTDSADRDAVIDVVRK--- 72 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----C--CeEEecCCCCHHHHHHHHHH---
Confidence 4678999999999999999999999999999888764 34444333222 2 45678999999988877753
Q ss_pred cCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 73 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 111 (237)
T PRK12742 73 -SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPY 111 (237)
T ss_pred -hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHH
Confidence 578999999999763 4456789999999999998875
No 187
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.78 E-value=6.7e-18 Score=117.80 Aligned_cols=114 Identities=16% Similarity=0.142 Sum_probs=94.7
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++.+|+++|||++++||.++++.|+++|++|++++|+++..+.+...+... ..+.++.+|++++++++++++++...
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999987776655554332 35788999999999999999998888
Q ss_pred CCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|.+|+++|..........+++++++++|+.+++
T Consensus 79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~ 115 (238)
T PRK05786 79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPL 115 (238)
T ss_pred hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHH
Confidence 8999999999997532222344889999999988764
No 188
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.78 E-value=2.7e-18 Score=116.02 Aligned_cols=110 Identities=23% Similarity=0.330 Sum_probs=84.8
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc---chhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 26 TAIVTGASSGIGAETTRVLALRGV-HVIMADRNM---AAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
++||||+.++||..++++|+++|. +|++++|+. ....+...+++.. +.++.++++|++|++++.++++++.+++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF 79 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence 799999999999999999999986 899999983 2345567777776 7899999999999999999999999999
Q ss_pred CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|+++||+||... +..+.++++++.++...+.|.+
T Consensus 80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~ 117 (181)
T PF08659_consen 80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLW 117 (181)
T ss_dssp S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHH
T ss_pred CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHH
Confidence 99999999999874 4557899999999998887654
No 189
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.77 E-value=4.8e-18 Score=119.29 Aligned_cols=111 Identities=27% Similarity=0.280 Sum_probs=88.4
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc-hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA-AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++|+++|||++++||+++++.|+++|++|++++|+.+ ..+....++... +.++.++.+|+++++++.++++++.+
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTARE 80 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999754 344455555443 45678899999999999999999988
Q ss_pred cCCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++++|++|||+|.... .. ..+...+++|+.+++
T Consensus 81 ~~~~~d~vi~~ag~~~~-~~---~~~~~~~~vn~~~~~ 114 (248)
T PRK07806 81 EFGGLDALVLNASGGME-SG---MDEDYAMRLNRDAQR 114 (248)
T ss_pred hCCCCcEEEECCCCCCC-CC---CCcceeeEeeeHHHH
Confidence 88999999999986421 11 124567778877664
No 190
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.77 E-value=6.4e-18 Score=120.23 Aligned_cols=113 Identities=21% Similarity=0.292 Sum_probs=97.5
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
...+|.++|||+.+|+|..+|++|.++|+.|++.+-.++.++.+..+.. ..+...+++|++++++++++.+.+.+.
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~ 101 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKH 101 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999988777777665543 456788899999999999999988875
Q ss_pred C--CCccEEEECcccC---CCCCccCHHHHHHHhhhcccccc
Q 042455 101 A--LPLNILINKAGIC---GTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~--~~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
. ..+..||||||+. ++..-.+.++|.+++++|++|++
T Consensus 102 l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~i 143 (322)
T KOG1610|consen 102 LGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTI 143 (322)
T ss_pred cccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHH
Confidence 4 3599999999976 35556899999999999999975
No 191
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.77 E-value=5.6e-18 Score=118.73 Aligned_cols=104 Identities=23% Similarity=0.312 Sum_probs=86.5
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
++++||||++|||.+++++|+++|++|++++|+++.++++... ..++.++++|+++.++++++++++.. .+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~---~~ 72 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDHPGTKAALSQLPF---IP 72 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence 6899999999999999999999999999999987765554332 24578899999999999999988642 47
Q ss_pred cEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 105 NILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 105 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|++|+|+|... +..+.+.++|++++++|+.|++
T Consensus 73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 107 (240)
T PRK06101 73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVA 107 (240)
T ss_pred CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999653 2335788999999999998875
No 192
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.77 E-value=7.3e-18 Score=117.99 Aligned_cols=109 Identities=32% Similarity=0.413 Sum_probs=89.8
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
.++++++|+++|||++++||..+++.|+++|++|++++|+.+..++..... ...++.+|+++.+++.++++.
T Consensus 3 ~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~- 74 (245)
T PRK07060 3 MAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA- 74 (245)
T ss_pred cccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH-
Confidence 445688999999999999999999999999999999999877665544322 245788999999998888775
Q ss_pred HhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+++|++|||+|... +..+.+.++|++.+.+|+.+++
T Consensus 75 ---~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 113 (245)
T PRK07060 75 ---AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAA 113 (245)
T ss_pred ---hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 468999999999863 3346788999999999998875
No 193
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.76 E-value=1.3e-17 Score=126.62 Aligned_cols=112 Identities=29% Similarity=0.402 Sum_probs=91.3
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+.+|+++|||++++||++++++|+++|++|+++++.... +...++.... + ...+.+|+++.++++++++.+.++
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~~-~--~~~~~~Dv~~~~~~~~~~~~~~~~ 281 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRV-G--GTALALDITAPDAPARIAEHLAER 281 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHc-C--CeEEEEeCCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999885322 1122222221 2 346789999999999999999999
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|+.. ...+.+.++|+.++++|+.|++
T Consensus 282 ~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~ 320 (450)
T PRK08261 282 HGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPL 320 (450)
T ss_pred CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 999999999999874 3446789999999999999875
No 194
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.7e-17 Score=116.73 Aligned_cols=108 Identities=21% Similarity=0.279 Sum_probs=87.6
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc-hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA-AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
|+++|||++++||++++++|+++|++|++++|++. ..++ +.... +.++.++.+|+++.++++++++++.+.++.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTK----LAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQE 76 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHH----HHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence 68999999999999999999999999999999863 2222 22211 456888999999999999999998776543
Q ss_pred --c--cEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 104 --L--NILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 --i--d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+ .++|+|+|... +..+.+.++|.+.+++|+.+++
T Consensus 77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (251)
T PRK06924 77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPM 117 (251)
T ss_pred ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHH
Confidence 2 28999999753 3457899999999999999865
No 195
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.75 E-value=2.4e-17 Score=116.21 Aligned_cols=106 Identities=25% Similarity=0.347 Sum_probs=87.9
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+|+++|||++++||.+++++|+++|++|++++|+.+..++........ +..+.++.+|++|.+++.+++. ++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~ 73 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WD 73 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CC
Confidence 578999999999999999999999999999999877666655544433 3468889999999999877654 37
Q ss_pred ccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|+||||||... +..+.+.+.|+..+++|+.+++
T Consensus 74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 109 (257)
T PRK09291 74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPL 109 (257)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHH
Confidence 999999999763 4457889999999999998764
No 196
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.75 E-value=3.4e-17 Score=111.75 Aligned_cols=114 Identities=25% Similarity=0.365 Sum_probs=91.4
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHC-CCEE-EEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALR-GVHV-IMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~-g~~v-~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
|..|.++||||.+|||+.++++|++. |-.+ +.+.|+++++.+..+..... ..+++.+++|+++.+++..+++++.+
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~--d~rvHii~Ldvt~deS~~~~~~~V~~ 78 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKS--DSRVHIIQLDVTCDESIDNFVQEVEK 78 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhcc--CCceEEEEEecccHHHHHHHHHHHHh
Confidence 34577999999999999999999975 5554 55677788764333333222 57899999999999999999999988
Q ss_pred c--CCCccEEEECcccCCC---CCccCHHHHHHHhhhcccccc
Q 042455 100 R--ALPLNILINKAGICGT---PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~--~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~g~~ 137 (138)
- ...+|+||||||+..+ ..+.+.+.|.+.+++|..|++
T Consensus 79 iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~i 121 (249)
T KOG1611|consen 79 IVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPI 121 (249)
T ss_pred hcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHH
Confidence 5 5679999999998743 345778889999999999875
No 197
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.74 E-value=8.4e-18 Score=117.90 Aligned_cols=104 Identities=34% Similarity=0.455 Sum_probs=90.9
Q ss_pred CCC--CchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC-CCccEE
Q 042455 31 GAS--SGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA-LPLNIL 107 (138)
Q Consensus 31 G~~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~l 107 (138)
|++ +|||+++|+.|+++|++|++++|+.++.++..+++....+ .+ .+++|++++++++++++++.+.+ |+||+|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l 77 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL 77 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence 556 9999999999999999999999999987777777776653 43 59999999999999999999999 999999
Q ss_pred EECcccCCC------CCccCHHHHHHHhhhcccccc
Q 042455 108 INKAGICGT------PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 108 v~~ag~~~~------~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|||+|...+ ..+.+.++|++.+++|+++++
T Consensus 78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (241)
T PF13561_consen 78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPF 113 (241)
T ss_dssp EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHH
T ss_pred EecccccccccCCCChHhCCHHHHHHHHHHHHHHHH
Confidence 999997642 346788999999999998875
No 198
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.74 E-value=1.3e-17 Score=116.29 Aligned_cols=100 Identities=27% Similarity=0.365 Sum_probs=82.2
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++++|+++|||++++||.++++.|+++|++|++++|+.... . ..++..+.+|++++ ++++.+.
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~------~~~~~~~ 64 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD------LEPLFDW 64 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH------HHHHHHh
Confidence 47789999999999999999999999999999999975431 0 24578889999877 4445556
Q ss_pred CCCccEEEECcccC---CCCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGIC---GTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++|||+|.. .+..+.+.++|++++++|+.+++
T Consensus 65 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 104 (235)
T PRK06550 65 VPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTF 104 (235)
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 68999999999975 23456789999999999999875
No 199
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.74 E-value=2.1e-17 Score=114.88 Aligned_cols=103 Identities=26% Similarity=0.323 Sum_probs=87.4
Q ss_pred EEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 042455 28 IVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNIL 107 (138)
Q Consensus 28 litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 107 (138)
+|||++++||++++++|+++|++|++++|+.+..+.....+.. +.++.++.+|+++++++++++++ .+++|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~l 73 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAE----AGPFDHV 73 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHh----cCCCCEE
Confidence 5899999999999999999999999999998776665555531 45688899999999999998876 3789999
Q ss_pred EECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 108 INKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 108 v~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|||+|... +..+.+.++|++++++|+.+++
T Consensus 74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 105 (230)
T PRK07041 74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAY 105 (230)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHH
Confidence 99999864 3446788999999999998875
No 200
>PRK08264 short chain dehydrogenase; Validated
Probab=99.74 E-value=3.2e-17 Score=114.47 Aligned_cols=105 Identities=32% Similarity=0.431 Sum_probs=88.5
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
+++.+|+++||||+++||+++|+.|+++|+ +|++++|+.++.++ . +..+.++.+|+++.+++.++++.
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~--~~~~~~~~~D~~~~~~~~~~~~~-- 70 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------L--GPRVVPLQLDVTDPASVAAAAEA-- 70 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------c--CCceEEEEecCCCHHHHHHHHHh--
Confidence 457789999999999999999999999999 99999998765443 1 45688999999999999887765
Q ss_pred hcCCCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++||++|... +..+.+.++|.+.+++|+.+++
T Consensus 71 --~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 110 (238)
T PRK08264 71 --ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPL 110 (238)
T ss_pred --cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHH
Confidence 468999999999832 3456789999999999998764
No 201
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.74 E-value=4.1e-17 Score=113.62 Aligned_cols=109 Identities=28% Similarity=0.394 Sum_probs=91.3
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecCc-chhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRNM-AAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
++|||++++||..++++|+++|++|++++|+. +..+.....+... +.++.++.+|++|+++++++++++.+.++++|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999999999998875 3444444555443 45688999999999999999999998899999
Q ss_pred EEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 106 ILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 106 ~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++||++|... +..+.+.+++++.+++|+.+++
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 112 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVF 112 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence 9999999764 2346778899999999998764
No 202
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.74 E-value=2.5e-17 Score=114.52 Aligned_cols=103 Identities=16% Similarity=0.168 Sum_probs=83.1
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
+++||||++|||+++++.|+++|++|++++|+.+++++...++ .+.++++|+++.++++++++++.+ ++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id 71 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD 71 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence 4899999999999999999999999999999887766544433 245788999999999999887653 699
Q ss_pred EEEECcccCC----C---CCccCHHHHHHHhhhccccccC
Q 042455 106 ILINKAGICG----T---PFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 106 ~lv~~ag~~~----~---~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
++|||+|... + ....+.++|++++++|+.++++
T Consensus 72 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~ 111 (223)
T PRK05884 72 TIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVL 111 (223)
T ss_pred EEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHH
Confidence 9999998531 1 1111578999999999998763
No 203
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.74 E-value=3.2e-17 Score=122.63 Aligned_cols=105 Identities=21% Similarity=0.228 Sum_probs=84.1
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+.+++|+++||||++|||+++++.|+++|++|++++|++++.++... .. ...+..+.+|++|.+++.+.+
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~---~~--~~~v~~v~~Dvsd~~~v~~~l----- 243 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN---GE--DLPVKTLHWQVGQEAALAELL----- 243 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---hc--CCCeEEEEeeCCCHHHHHHHh-----
Confidence 35679999999999999999999999999999999998765443221 11 234677899999998876543
Q ss_pred cCCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|||||... ..+.+.+++++++++|+.|++
T Consensus 244 --~~IDiLInnAGi~~-~~~~s~e~~~~~~~vNv~g~i 278 (406)
T PRK07424 244 --EKVDILIINHGINV-HGERTPEAINKSYEVNTFSAW 278 (406)
T ss_pred --CCCCEEEECCCcCC-CCCCCHHHHHHHHHHHHHHHH
Confidence 57999999999753 236788999999999999875
No 204
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.74 E-value=4.3e-17 Score=113.20 Aligned_cols=104 Identities=26% Similarity=0.376 Sum_probs=87.2
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
|+++|||++++||.+++++|+++|++|++++|+++..++.. .+ ..+.+..+|++|+++++++++.+.. +++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~------~~~~~~~~D~~d~~~~~~~~~~~~~--~~i 72 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL------PGVHIEKLDMNDPASLDQLLQRLQG--QRF 72 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc------cccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence 68999999999999999999999999999999987654421 11 2466788999999999999998754 479
Q ss_pred cEEEECcccCC----CCCccCHHHHHHHhhhcccccc
Q 042455 105 NILINKAGICG----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 105 d~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|++|+|+|... +..+.+.+++.+.+.+|+.+++
T Consensus 73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 109 (225)
T PRK08177 73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPI 109 (225)
T ss_pred CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHH
Confidence 99999999863 2446788999999999998865
No 205
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.74 E-value=4.5e-17 Score=108.03 Aligned_cols=111 Identities=26% Similarity=0.339 Sum_probs=91.3
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHH---HHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDV---KVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
|+++|||++++||.+++++|+++|+ .|++++|+.+..+.. ...+... +.++.++.+|++++++++++++++...
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999997 688888876554332 2333332 567888999999999999999999888
Q ss_pred CCCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++++|++||++|... +..+.+.++|++.+++|+.+++
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 117 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAW 117 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHH
Confidence 999999999999763 3456788999999999988764
No 206
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.73 E-value=2.8e-17 Score=116.88 Aligned_cols=114 Identities=22% Similarity=0.244 Sum_probs=102.3
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
+.++|||+++|||+++|.....+|++|-++.|+..++.++.+.+.....-..+.+..+|+.|.++++.++++++...+.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 78999999999999999999999999999999999999998888655423337789999999999999999999989999
Q ss_pred cEEEECcccCC--CCCccCHHHHHHHhhhccccccC
Q 042455 105 NILINKAGICG--TPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 105 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
|.+|+|||..- -+.+.+.+.++..+++|+.|+++
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~ 149 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVN 149 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHH
Confidence 99999999763 45689999999999999999864
No 207
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.73 E-value=5.4e-17 Score=113.76 Aligned_cols=105 Identities=27% Similarity=0.325 Sum_probs=85.8
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH-HHhcC---
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASD-FTARA--- 101 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~--- 101 (138)
+++|||++++||.+++++|+++|++|++++|+.+.. . ... .+.++.++++|+++.+++++++++ +.+.+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 75 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG 75 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence 699999999999999999999999999999986541 1 111 145788999999999999998877 55433
Q ss_pred CCccEEEECcccCC---CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG---TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+++|++|||+|... +..+.+.++|++.+++|+.|++
T Consensus 76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 114 (243)
T PRK07023 76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPL 114 (243)
T ss_pred CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHH
Confidence 47999999999763 3446788999999999999864
No 208
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.73 E-value=5.9e-17 Score=112.78 Aligned_cols=102 Identities=22% Similarity=0.259 Sum_probs=86.2
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
|.+|+++|||++++||++++++|+++|++|++++|+.+.. . . ..++.+|+++.++++++++++.+.+
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~-~--~~~~~~D~~~~~~~~~~~~~~~~~~ 67 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------F-P--GELFACDLADIEQTAATLAQINEIH 67 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------c-C--ceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 3578999999999999999999999999999999986530 1 1 1467899999999999999988776
Q ss_pred CCccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++|||+|... +..+.+.++|.+.+++|+.+++
T Consensus 68 -~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 104 (234)
T PRK07577 68 -PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAV 104 (234)
T ss_pred -CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHH
Confidence 6899999999864 3345688999999999998865
No 209
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.73 E-value=4.8e-17 Score=141.04 Aligned_cols=112 Identities=20% Similarity=0.215 Sum_probs=92.1
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEecCcc------------------------------------------
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALR-GVHVIMADRNMA------------------------------------------ 59 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~-g~~v~~~~r~~~------------------------------------------ 59 (138)
+++++|||||++|||.++|++|+++ |++|++++|+..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5899999999999999999999998 699999999820
Q ss_pred -----hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEEEECcccCC--CCCccCHHHHHHHhhhc
Q 042455 60 -----AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNILINKAGICG--TPFMLSKDNIELHFATN 132 (138)
Q Consensus 60 -----~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n 132 (138)
........+... +.++.++.||++|.++++++++++.++ ++||+||||||+.. ...+.+.++|+++|++|
T Consensus 2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence 001112222222 567899999999999999999999876 68999999999874 45578999999999999
Q ss_pred ccccc
Q 042455 133 HLGAF 137 (138)
Q Consensus 133 ~~g~~ 137 (138)
+.|++
T Consensus 2153 v~G~~ 2157 (2582)
T TIGR02813 2153 VDGLL 2157 (2582)
T ss_pred HHHHH
Confidence 99875
No 210
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.72 E-value=1.9e-16 Score=108.31 Aligned_cols=113 Identities=11% Similarity=0.089 Sum_probs=97.3
Q ss_pred CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGAS--SGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 20 ~~~~~k~~litG~~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
..|+||++||+|-. ++|++.||+.+.++|+++++++.++ +++....++.+.. .....++||+++.++++++++++
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~--~s~~v~~cDV~~d~~i~~~f~~i 78 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL--GSDLVLPCDVTNDESIDALFATI 78 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc--cCCeEEecCCCCHHHHHHHHHHH
Confidence 46899999999986 6999999999999999999999887 6666666666553 23578899999999999999999
Q ss_pred HhcCCCccEEEECcccCC------CCCccCHHHHHHHhhhcccc
Q 042455 98 TARALPLNILINKAGICG------TPFMLSKDNIELHFATNHLG 135 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~g 135 (138)
.+++|++|+|||+.|... ...+++.|.|...+++..++
T Consensus 79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS 122 (259)
T COG0623 79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYS 122 (259)
T ss_pred HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhh
Confidence 999999999999999862 45578999999999887765
No 211
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1.5e-16 Score=110.20 Aligned_cols=103 Identities=28% Similarity=0.392 Sum_probs=84.8
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
|+++|||++++||.+++++|+++|++|++++|+.+..++.. .. .+.++.+|+++.++++++++++.. +++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~----~~~~~~~D~~~~~~v~~~~~~~~~--~~~ 71 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL----GAEALALDVADPASVAGLAWKLDG--EAL 71 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc----cceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence 68999999999999999999999999999999876654432 11 245789999999999998877642 479
Q ss_pred cEEEECcccCC----CCCccCHHHHHHHhhhcccccc
Q 042455 105 NILINKAGICG----TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 105 d~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|++|||+|... +..+.+.++|++.+++|+.+++
T Consensus 72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 108 (222)
T PRK06953 72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPM 108 (222)
T ss_pred CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHH
Confidence 99999999863 2335689999999999999875
No 212
>PRK08017 oxidoreductase; Provisional
Probab=99.70 E-value=2.3e-16 Score=111.15 Aligned_cols=106 Identities=30% Similarity=0.350 Sum_probs=88.0
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC-C
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA-L 102 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 102 (138)
.|+++|||++++||+++++.|+++|++|++++|+.++.+... . ..+..+.+|+++.+++..+++.+.... +
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 73 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----S----LGFTGILLDLDDPESVERAADEVIALTDN 73 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----h----CCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 378999999999999999999999999999999876654432 1 125678999999999999999887643 6
Q ss_pred CccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++|+|+|... +..+.+.+++++.+++|+.|++
T Consensus 74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~ 110 (256)
T PRK08017 74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTH 110 (256)
T ss_pred CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHH
Confidence 8999999999753 3446788999999999998764
No 213
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.67 E-value=3.4e-16 Score=106.79 Aligned_cols=88 Identities=22% Similarity=0.346 Sum_probs=76.3
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
+++|||+++|||+++++.|+++ ++|++++|+.. .+++|+++.+++++++++ ++++|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~id 57 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKVD 57 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCCC
Confidence 6899999999999999999999 99999998742 358999999999998875 47899
Q ss_pred EEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 106 ILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 106 ~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|||+|... +..+.+.++|.+.+++|+.+++
T Consensus 58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 91 (199)
T PRK07578 58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQV 91 (199)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHH
Confidence 9999999753 3446789999999999998875
No 214
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.66 E-value=9.8e-16 Score=106.82 Aligned_cols=99 Identities=23% Similarity=0.285 Sum_probs=78.2
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCC--CEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRG--VHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
++++|||+++|||+++|++|+++| +.|++..|+.... ....++.++++|+++.++++++. ++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~~~~~~~~----~~~~ 66 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDEAEIKQLS----EQFT 66 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCHHHHHHHH----HhcC
Confidence 469999999999999999999985 5676667754321 11356788999999999988854 4457
Q ss_pred CccEEEECcccCCC--------CCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICGT--------PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~~--------~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++|||+|.... ..+.+.+.|.+.+++|+.+++
T Consensus 67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~ 109 (235)
T PRK09009 67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSL 109 (235)
T ss_pred CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHH
Confidence 89999999998631 235688899999999998875
No 215
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.3e-15 Score=105.42 Aligned_cols=103 Identities=21% Similarity=0.311 Sum_probs=83.9
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+|+++||||+++||+++++.|+++ ++|++++|+.+..++..... ..+.++.+|++|.+++.++++++ ++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~----~~ 71 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVEQL----GR 71 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHHhc----CC
Confidence 578999999999999999999999 99999999876654443222 23678899999999998887754 57
Q ss_pred ccEEEECcccCC--CCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICG--TPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|++||++|... +..+.+.++|.+.+++|+.+++
T Consensus 72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 107 (227)
T PRK08219 72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPA 107 (227)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHH
Confidence 999999999864 3346788999999999988753
No 216
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.62 E-value=7.2e-15 Score=108.42 Aligned_cols=90 Identities=12% Similarity=0.025 Sum_probs=72.8
Q ss_pred CCCCEEEEeCCCCchHHH--HHHHHHHCCCEEEEEecCcchhH------------HHHHHHHhcCCCCeeEEEEecCCCH
Q 042455 22 AAGVTAIVTGASSGIGAE--TTRVLALRGVHVIMADRNMAAGR------------DVKVAIVMQNPAAKVDVMELDLSSL 87 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~--~a~~l~~~g~~v~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~D~~~~ 87 (138)
.-+|++||||+++|||.+ +|+.| .+|++++++++..+..+ .....+... +..+..+.||+++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVss~ 115 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAFSD 115 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCCCH
Confidence 457999999999999999 89999 99999888875432211 122222222 45678899999999
Q ss_pred HHHHHHHHHHHhcCCCccEEEECcccC
Q 042455 88 ASVRKFASDFTARALPLNILINKAGIC 114 (138)
Q Consensus 88 ~~~~~~~~~~~~~~~~id~lv~~ag~~ 114 (138)
++++++++++.+++|+||+||||+|..
T Consensus 116 E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 116 EIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 999999999999999999999999976
No 217
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.61 E-value=7.6e-15 Score=111.63 Aligned_cols=110 Identities=20% Similarity=0.198 Sum_probs=95.7
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.+.||+++||||+|+||.++|+++++.+. ++++.++++.+...+..++...++..++.++-+|+.|.+.++.++++.
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-- 324 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-- 324 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence 36899999999999999999999999987 799999999999999999998887788999999999999999998874
Q ss_pred cCCCccEEEECcccCC-CCCccCHHHHHHHhhhccccccC
Q 042455 100 RALPLNILINKAGICG-TPFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
++|+++|.|+.-+ |.-+.. ..+.+.+|+.|+.|
T Consensus 325 ---kvd~VfHAAA~KHVPl~E~n---P~Eai~tNV~GT~n 358 (588)
T COG1086 325 ---KVDIVFHAAALKHVPLVEYN---PEEAIKTNVLGTEN 358 (588)
T ss_pred ---CCceEEEhhhhccCcchhcC---HHHHHHHhhHhHHH
Confidence 6999999999865 333444 45689999998753
No 218
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.60 E-value=7.4e-15 Score=107.06 Aligned_cols=106 Identities=16% Similarity=0.185 Sum_probs=80.0
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
++|++|||||+|+||.++++.|+++|++|+++.|+.+..+.....+.......++.++.+|+++.++++++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------- 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence 3789999999999999999999999999999988876544432222111112468889999999999888775
Q ss_pred CccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++||+||.... ..+.+.+.+.+++|+.|++
T Consensus 77 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~ 109 (325)
T PLN02989 77 GCETVFHTASPVAI--TVKTDPQVELINPAVNGTI 109 (325)
T ss_pred CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHHHH
Confidence 47999999996432 2334557788888888764
No 219
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.58 E-value=1.8e-14 Score=106.15 Aligned_cols=106 Identities=21% Similarity=0.141 Sum_probs=82.1
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
++||++|||||+|+||.++++.|+++|++|++++|+..........+.. ..++.++.+|+++.+++.+++++.
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~---- 74 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF---- 74 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc----
Confidence 4578999999999999999999999999999999987654433322221 235677899999999999988864
Q ss_pred CCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++||+||... ...+.+++...+++|+.+++
T Consensus 75 -~~d~vih~A~~~~--~~~~~~~~~~~~~~N~~g~~ 107 (349)
T TIGR02622 75 -KPEIVFHLAAQPL--VRKSYADPLETFETNVMGTV 107 (349)
T ss_pred -CCCEEEECCcccc--cccchhCHHHHHHHhHHHHH
Confidence 5899999999532 23445566778889987764
No 220
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.56 E-value=4.9e-14 Score=108.65 Aligned_cols=105 Identities=18% Similarity=0.222 Sum_probs=78.4
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhc-----C--CCCeeEEEEecCCCHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQ-----N--PAAKVDVMELDLSSLASVRKF 93 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-----~--~~~~~~~~~~D~~~~~~~~~~ 93 (138)
.+.+|+++||||+|+||++++++|+++|++|++++|+.++++.+...+... . ...++.++.+|+++.+++.+.
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 467899999999999999999999999999999999988877665544321 0 113588899999999887653
Q ss_pred HHHHHhcCCCccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 94 ASDFTARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 94 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
++++|+||||+|.... ...+|...+.+|+.|+
T Consensus 157 -------LggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt 188 (576)
T PLN03209 157 -------LGNASVVICCIGASEK----EVFDVTGPYRIDYLAT 188 (576)
T ss_pred -------hcCCCEEEEccccccc----cccchhhHHHHHHHHH
Confidence 3578999999996431 1123455566665544
No 221
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.55 E-value=4.9e-14 Score=103.04 Aligned_cols=102 Identities=14% Similarity=0.125 Sum_probs=76.8
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRG--VHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+++|+++||||+|+||.++++.|+++| ++|++++|+......+...+ ...++.++.+|++|.+.+.++++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~---- 73 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR---- 73 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh----
Confidence 468999999999999999999999986 68999998765543332222 13468889999999999887765
Q ss_pred cCCCccEEEECcccCCC-CCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICGT-PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++||+||.... ..+.+ ..+.+++|+.|++
T Consensus 74 ---~iD~Vih~Ag~~~~~~~~~~---~~~~~~~Nv~g~~ 106 (324)
T TIGR03589 74 ---GVDYVVHAAALKQVPAAEYN---PFECIRTNINGAQ 106 (324)
T ss_pred ---cCCEEEECcccCCCchhhcC---HHHHHHHHHHHHH
Confidence 48999999997532 11223 2467889988765
No 222
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.53 E-value=5.9e-14 Score=102.98 Aligned_cols=110 Identities=21% Similarity=0.176 Sum_probs=79.1
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhH-HHHHHHHh-c-CCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGR-DVKVAIVM-Q-NPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~-~-~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+.++|++|||||+|+||.+++++|+++|++|++++|..+... .....+.. . ..+..+.++.+|++|.+++.++++..
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 567899999999999999999999999999999988654211 11122211 0 01245889999999999999998874
Q ss_pred HhcCCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 98 TARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|+|||+|+..... ...+.....+++|+.|+.
T Consensus 83 -----~~d~Vih~A~~~~~~--~~~~~~~~~~~~N~~gt~ 115 (340)
T PLN02653 83 -----KPDEVYNLAAQSHVA--VSFEMPDYTADVVATGAL 115 (340)
T ss_pred -----CCCEEEECCcccchh--hhhhChhHHHHHHHHHHH
Confidence 589999999975321 222334566677776653
No 223
>PLN02240 UDP-glucose 4-epimerase
Probab=99.52 E-value=1.4e-13 Score=101.24 Aligned_cols=110 Identities=21% Similarity=0.241 Sum_probs=79.3
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcC--CCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQN--PAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
+|++|+++||||+|+||.+++++|+++|++|++++|...........+.... .+..+.++.+|+++++++.++++..
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~- 80 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST- 80 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence 5678999999999999999999999999999999875433222112222111 1245788999999999999888752
Q ss_pred hcCCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 99 ARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++||+|+.... ..+.+++.+.+++|+.+++
T Consensus 81 ----~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~ 113 (352)
T PLN02240 81 ----RFDAVIHFAGLKAV--GESVAKPLLYYDNNLVGTI 113 (352)
T ss_pred ----CCCEEEEccccCCc--cccccCHHHHHHHHHHHHH
Confidence 68999999996432 1233455667788876653
No 224
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.52 E-value=1.5e-13 Score=104.38 Aligned_cols=111 Identities=13% Similarity=0.129 Sum_probs=80.4
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc---h----h---------HHHHHHHHhcCCCCeeEEEEecC
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA---A----G---------RDVKVAIVMQNPAAKVDVMELDL 84 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~---~----~---------~~~~~~l~~~~~~~~~~~~~~D~ 84 (138)
..+++++|||||+|+||..+++.|+++|++|+++++... . . .+....+... .+.++.++.+|+
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~Dl 122 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYVGDI 122 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEECCC
Confidence 467889999999999999999999999999999864211 1 0 0111111111 124588999999
Q ss_pred CCHHHHHHHHHHHHhcCCCccEEEECcccCCC-CCccCHHHHHHHhhhcccccc
Q 042455 85 SSLASVRKFASDFTARALPLNILINKAGICGT-PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|.+.+.++++.. ++|+|||+|+.... ....+++++...+++|+.|++
T Consensus 123 ~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~ 171 (442)
T PLN02572 123 CDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTL 171 (442)
T ss_pred CCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHH
Confidence 9999999988863 68999999976432 224455667778889988865
No 225
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.49 E-value=2.9e-13 Score=98.62 Aligned_cols=105 Identities=18% Similarity=0.203 Sum_probs=75.5
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
-++|+++||||+|.||..++++|+++|++|+++.|+.+..+.............++.++.+|+++.+.+.++++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------ 76 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence 45889999999999999999999999999999999876544332222111112467889999999998887776
Q ss_pred CCccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 102 LPLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 102 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
.+|++||+|+...... . +...+.+++|+.|+
T Consensus 77 -~~d~vih~A~~~~~~~-~--~~~~~~~~~nv~gt 107 (322)
T PLN02986 77 -GCDAVFHTASPVFFTV-K--DPQTELIDPALKGT 107 (322)
T ss_pred -CCCEEEEeCCCcCCCC-C--CchhhhhHHHHHHH
Confidence 3799999999642211 1 12245667777665
No 226
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.49 E-value=1.4e-14 Score=103.48 Aligned_cols=103 Identities=23% Similarity=0.257 Sum_probs=73.2
Q ss_pred EEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCee----EEEEecCCCHHHHHHHHHHHHhcC
Q 042455 27 AIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKV----DVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~----~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
+|||||+|+||.++|++|++.+. +++++++++..+.++..+++...++.++ ..+.+|+.|.+.+.+++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~---- 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY---- 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence 68999999999999999999986 7999999999999988888765544333 34588999999999998864
Q ss_pred CCccEEEECcccCCC-CCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICGT-PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|+++|.|+.-+. ..+. ...+.+.+|+.|+.
T Consensus 77 -~pdiVfHaAA~KhVpl~E~---~p~eav~tNv~GT~ 109 (293)
T PF02719_consen 77 -KPDIVFHAAALKHVPLMED---NPFEAVKTNVLGTQ 109 (293)
T ss_dssp -T-SEEEE------HHHHCC---CHHHHHHHHCHHHH
T ss_pred -CCCEEEEChhcCCCChHHh---CHHHHHHHHHHHHH
Confidence 79999999997552 2233 34668999998864
No 227
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.46 E-value=4.2e-13 Score=98.64 Aligned_cols=105 Identities=17% Similarity=0.131 Sum_probs=73.2
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchh-HHHHHHHHhc---CCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAG-RDVKVAIVMQ---NPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
|++|||||+|.||..++++|+++|++|++++|+.+.. .+....+... ..+..+.++.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 6899999999999999999999999999999876421 1111111111 01235788999999999999988874
Q ss_pred CCCccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 101 ALPLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
++|++||+|+..+... +.+.-...+++|+.|+
T Consensus 78 --~~d~ViH~Aa~~~~~~--~~~~~~~~~~~n~~gt 109 (343)
T TIGR01472 78 --KPTEIYNLAAQSHVKV--SFEIPEYTADVDGIGT 109 (343)
T ss_pred --CCCEEEECCcccccch--hhhChHHHHHHHHHHH
Confidence 5899999999754211 1122234555665554
No 228
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.45 E-value=1.3e-12 Score=96.47 Aligned_cols=85 Identities=21% Similarity=0.166 Sum_probs=68.3
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
+..++++|||||+|.||..+++.|+++|++|++++|+.+..+.....+.. +.++.++.+|+++.+.+.++++
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~----- 78 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK----- 78 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc-----
Confidence 35577899999999999999999999999999999987655544333321 3468889999999998877764
Q ss_pred CCCccEEEECcccCC
Q 042455 101 ALPLNILINKAGICG 115 (138)
Q Consensus 101 ~~~id~lv~~ag~~~ 115 (138)
.+|+|||+|+...
T Consensus 79 --~~d~Vih~A~~~~ 91 (353)
T PLN02896 79 --GCDGVFHVAASME 91 (353)
T ss_pred --CCCEEEECCcccc
Confidence 4799999999764
No 229
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.42 E-value=1.7e-12 Score=94.31 Aligned_cols=103 Identities=16% Similarity=0.123 Sum_probs=72.8
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhc-CCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQ-NPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
.+|++|||||+|.||..++++|+++|++|.++.|+....... ..+... ....++.++.+|+++.+.+..+++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD------ 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence 368999999999999999999999999999999876543322 122211 112367889999999988877765
Q ss_pred CCccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 102 LPLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 102 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
.+|++||+|+...... ..+ ....+++|+.|+
T Consensus 76 -~~d~Vih~A~~~~~~~-~~~--~~~~~~~nv~gt 106 (322)
T PLN02662 76 -GCEGVFHTASPFYHDV-TDP--QAELIDPAVKGT 106 (322)
T ss_pred -CCCEEEEeCCcccCCC-CCh--HHHHHHHHHHHH
Confidence 4799999999643211 111 135666776654
No 230
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.41 E-value=1.2e-12 Score=96.44 Aligned_cols=104 Identities=15% Similarity=0.242 Sum_probs=73.9
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEE-EEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHV-IMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v-~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
|++|||||+|.||.++++.|+++|+.+ +++++..... .. ..+....+..++.++.+|++|.++++++++. .+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAG-NL-MSLAPVAQSERFAFEKVDICDRAELARVFTE-----HQ 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcccc-ch-hhhhhcccCCceEEEECCCcChHHHHHHHhh-----cC
Confidence 579999999999999999999999864 4555543211 11 1111111134577889999999999888876 26
Q ss_pred ccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|+|||+||.... ..+.+++...+++|+.|++
T Consensus 75 ~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~ 106 (355)
T PRK10217 75 PDCVMHLAAESHV--DRSIDGPAAFIETNIVGTY 106 (355)
T ss_pred CCEEEECCcccCc--chhhhChHHHHHHhhHHHH
Confidence 9999999996432 2344567788888887764
No 231
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.40 E-value=3.4e-12 Score=93.62 Aligned_cols=105 Identities=14% Similarity=0.128 Sum_probs=73.2
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
+.+++++||||+|.||..+++.|+++|++|+++.|+.+...... .+.......++.++.+|++|.+.+.++++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 79 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRALQELGDLKIFGADLTDEESFEAPIA------ 79 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence 45789999999999999999999999999998888765433221 11111001257888999999988877664
Q ss_pred CCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|++||+|+.... . ..+.+...+++|+.|++
T Consensus 80 -~~d~vih~A~~~~~-~--~~~~~~~~~~~nv~g~~ 111 (338)
T PLN00198 80 -GCDLVFHVATPVNF-A--SEDPENDMIKPAIQGVH 111 (338)
T ss_pred -cCCEEEEeCCCCcc-C--CCChHHHHHHHHHHHHH
Confidence 47999999985321 1 11223455677776653
No 232
>PLN02650 dihydroflavonol-4-reductase
Probab=99.40 E-value=2.8e-12 Score=94.58 Aligned_cols=105 Identities=21% Similarity=0.101 Sum_probs=75.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.+|++|||||+|.||..++++|+++|++|++++|+.+........+.......++.++.+|+++.+.+..+++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence 4678999999999999999999999999999999876554433222111101357889999999998887765
Q ss_pred CccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+|++||+|+.... ... +.+...+++|+.|++
T Consensus 77 ~~d~ViH~A~~~~~-~~~--~~~~~~~~~Nv~gt~ 108 (351)
T PLN02650 77 GCTGVFHVATPMDF-ESK--DPENEVIKPTVNGML 108 (351)
T ss_pred CCCEEEEeCCCCCC-CCC--CchhhhhhHHHHHHH
Confidence 37999999986431 111 223456777877654
No 233
>PLN02214 cinnamoyl-CoA reductase
Probab=99.40 E-value=2.9e-12 Score=94.40 Aligned_cols=100 Identities=21% Similarity=0.168 Sum_probs=74.6
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHH-HHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDV-KVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
+++|+++||||+|.||..+++.|+++|++|.+++|+.+..... ...+.. ...++.++.+|++|.+++..+++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----- 80 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID----- 80 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-----
Confidence 4578999999999999999999999999999999986543221 122221 12357888999999998887775
Q ss_pred CCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|+|||+|+... +++.+.+++|+.|+.
T Consensus 81 --~~d~Vih~A~~~~-------~~~~~~~~~nv~gt~ 108 (342)
T PLN02214 81 --GCDGVFHTASPVT-------DDPEQMVEPAVNGAK 108 (342)
T ss_pred --cCCEEEEecCCCC-------CCHHHHHHHHHHHHH
Confidence 4799999998531 234566777776653
No 234
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.37 E-value=1.3e-11 Score=83.18 Aligned_cols=85 Identities=16% Similarity=0.212 Sum_probs=71.7
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
+++||||+ |+|.++++.|+++|++|.+++|+++..+.+...+.. ..++.++.+|++|.+++.++++.+.++++++|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 58999998 788889999999999999999987776665544422 34688899999999999999999999899999
Q ss_pred EEEECcccC
Q 042455 106 ILINKAGIC 114 (138)
Q Consensus 106 ~lv~~ag~~ 114 (138)
++|+.+=..
T Consensus 78 ~lv~~vh~~ 86 (177)
T PRK08309 78 LAVAWIHSS 86 (177)
T ss_pred EEEEecccc
Confidence 999887654
No 235
>PLN02583 cinnamoyl-CoA reductase
Probab=99.36 E-value=9.8e-12 Score=89.88 Aligned_cols=103 Identities=15% Similarity=0.017 Sum_probs=73.4
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcch--hHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAA--GRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
-++|+++||||+|+||.+++++|+++|++|+++.|+... ..+....+... +.++.++.+|++|.+++.+++.
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~---- 77 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALK---- 77 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHc----
Confidence 357899999999999999999999999999999986432 22222222111 2457888999999988866554
Q ss_pred cCCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 100 RALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
..|.+++.++... +.. +++++++++|+.|++
T Consensus 78 ---~~d~v~~~~~~~~---~~~-~~~~~~~~~nv~gt~ 108 (297)
T PLN02583 78 ---GCSGLFCCFDPPS---DYP-SYDEKMVDVEVRAAH 108 (297)
T ss_pred ---CCCEEEEeCccCC---ccc-ccHHHHHHHHHHHHH
Confidence 4688887665322 111 245788999988865
No 236
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=99.34 E-value=4.3e-12 Score=88.62 Aligned_cols=93 Identities=13% Similarity=0.207 Sum_probs=72.9
Q ss_pred EEEeCC-CCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 27 AIVTGA-SSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 27 ~litG~-~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
=.||.. +||||+++|+.|+++|++|+++++... +... . ...+|+++.++++++++.+.+.++++|
T Consensus 17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~--~----~~~~Dv~d~~s~~~l~~~v~~~~g~iD 82 (227)
T TIGR02114 17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE--P----HPNLSIREIETTKDLLITLKELVQEHD 82 (227)
T ss_pred eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc--c----CCcceeecHHHHHHHHHHHHHHcCCCC
Confidence 355655 679999999999999999999876311 1100 1 235899999999999999999999999
Q ss_pred EEEECcccCC--CCCccCHHHHHHHhhhcc
Q 042455 106 ILINKAGICG--TPFMLSKDNIELHFATNH 133 (138)
Q Consensus 106 ~lv~~ag~~~--~~~~~~~~~~~~~~~~n~ 133 (138)
++|||||+.. +..+.+.++|++++..|.
T Consensus 83 iLVnnAgv~d~~~~~~~s~e~~~~~~~~~~ 112 (227)
T TIGR02114 83 ILIHSMAVSDYTPVYMTDLEQVQASDNLNE 112 (227)
T ss_pred EEEECCEeccccchhhCCHHHHhhhcchhh
Confidence 9999999763 455788999999876653
No 237
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.33 E-value=7.2e-13 Score=90.80 Aligned_cols=112 Identities=13% Similarity=0.115 Sum_probs=83.7
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.+|.+|+||+++|||..+++.+..++-.....+++...++ ...+.-.. +........|+++..-+.++++..+.+.+
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~-gd~~v~~~g~~~e~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAY-GDDFVHVVGDITEEQLLGALREAPRKKGG 81 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEe-cCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence 4788999999999999999999988765544444433332 22222222 23334456788888888999999999999
Q ss_pred CccEEEECcccCCCCC-----ccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICGTPF-----MLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~~~~-----~~~~~~~~~~~~~n~~g~~ 137 (138)
+.|++|||||..++.. ..+.++|.+.|+.|+++.+
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~V 121 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMV 121 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHH
Confidence 9999999999986532 4678999999999998864
No 238
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.31 E-value=2e-11 Score=88.44 Aligned_cols=103 Identities=18% Similarity=0.140 Sum_probs=77.4
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH--HHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD--VKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.++.++||||+|-||..+++.|+++||.|..+.|+++..+. ...++... ..+...+..|++|++++..+++.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf~~ai~g---- 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSFDKAIDG---- 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC--cccceEEeccccccchHHHHHhC----
Confidence 67899999999999999999999999999999999887443 23333322 45689999999999999988885
Q ss_pred CCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.|+|+|.|....... .+++ .+.++..+.|+.
T Consensus 79 ---cdgVfH~Asp~~~~~-~~~e--~~li~pav~Gt~ 109 (327)
T KOG1502|consen 79 ---CDGVFHTASPVDFDL-EDPE--KELIDPAVKGTK 109 (327)
T ss_pred ---CCEEEEeCccCCCCC-CCcH--HhhhhHHHHHHH
Confidence 699999998643211 1111 246666665543
No 239
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.31 E-value=2.8e-11 Score=88.59 Aligned_cols=103 Identities=23% Similarity=0.223 Sum_probs=71.4
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
+++||||+|.||..+++.|+++|++|++++|...........+... ++.++.++.+|++|.+.+.++++. .++|
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d 75 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALLTEILHD-----HAID 75 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence 5899999999999999999999999998876543322222222221 134567789999999998888764 3699
Q ss_pred EEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 106 ILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 106 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
++||+||...... ..+.....+++|+.++
T Consensus 76 ~vvh~a~~~~~~~--~~~~~~~~~~~n~~~~ 104 (338)
T PRK10675 76 TVIHFAGLKAVGE--SVQKPLEYYDNNVNGT 104 (338)
T ss_pred EEEECCccccccc--hhhCHHHHHHHHHHHH
Confidence 9999998753211 1122344566666544
No 240
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.30 E-value=4e-11 Score=89.86 Aligned_cols=89 Identities=24% Similarity=0.259 Sum_probs=68.6
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH--HHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD--VKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
.+.++++++||||+|.||..+++.|+++|++|+++.|+...... ...++... ...+.++.+|++|.+++.++++..
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~ 133 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSE 133 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHh
Confidence 34567899999999999999999999999999999998754321 11111111 235788999999999999988754
Q ss_pred HhcCCCccEEEECccc
Q 042455 98 TARALPLNILINKAGI 113 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~ 113 (138)
. +++|+||||+|.
T Consensus 134 ~---~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 G---DPVDVVVSCLAS 146 (390)
T ss_pred C---CCCcEEEECCcc
Confidence 1 269999999985
No 241
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.29 E-value=2.4e-11 Score=89.63 Aligned_cols=109 Identities=15% Similarity=0.103 Sum_probs=75.1
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcC---CCCeeEEEEecCCCHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQN---PAAKVDVMELDLSSLASVRKFASD 96 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~~~ 96 (138)
..+.+|+++||||+|-||..++++|+++|++|++++|...........+.... ...++.++.+|+.|.+.+..+++
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~- 89 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK- 89 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence 34667899999999999999999999999999999886543222222221111 11357889999999888777765
Q ss_pred HHhcCCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 97 FTARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 97 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+|+|||.|+...... +.++....+++|+.|+.
T Consensus 90 ------~~d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~ 122 (348)
T PRK15181 90 ------NVDYVLHQAALGSVPR--SLKDPIATNSANIDGFL 122 (348)
T ss_pred ------CCCEEEECccccCchh--hhhCHHHHHHHHHHHHH
Confidence 3799999999653221 11223345777776653
No 242
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.28 E-value=2.2e-11 Score=87.99 Aligned_cols=101 Identities=18% Similarity=0.186 Sum_probs=70.7
Q ss_pred EEEEeCCCCchHHHHHHHHHHCC--CEEEEEecCcchh-HHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 26 TAIVTGASSGIGAETTRVLALRG--VHVIMADRNMAAG-RDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
+++||||+|+||.+++++|++.| ++|++++|..... .+....+.. ...+.++.+|++|++++.++++..
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----- 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED---NPRYRFVKGDIGDRELVSRLFTEH----- 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc---CCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence 48999999999999999999987 6888887643211 111122211 235778899999999998888753
Q ss_pred CccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 103 PLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 103 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
++|++||+|+.... ..+.+.+...+++|+.++
T Consensus 73 ~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~ 104 (317)
T TIGR01181 73 QPDAVVHFAAESHV--DRSISGPAAFIETNVVGT 104 (317)
T ss_pred CCCEEEEcccccCc--hhhhhCHHHHHHHHHHHH
Confidence 58999999996431 223344556677776654
No 243
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.27 E-value=3.1e-11 Score=87.51 Aligned_cols=101 Identities=20% Similarity=0.218 Sum_probs=69.8
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
+++||||+|.||..+++.|+++|++|+++++...........+.. ...+..+.+|+++.+++.++++. +++|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d 72 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDRELLDRLFEE-----HKID 72 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence 478999999999999999999999998887644332222222211 12577889999999999888874 4799
Q ss_pred EEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 106 ILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 106 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
++||+||...... +.++..+.+..|+.++
T Consensus 73 ~vv~~ag~~~~~~--~~~~~~~~~~~n~~~~ 101 (328)
T TIGR01179 73 AVIHFAGLIAVGE--SVQDPLKYYRNNVVNT 101 (328)
T ss_pred EEEECccccCcch--hhcCchhhhhhhHHHH
Confidence 9999999753211 1222334555565543
No 244
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.26 E-value=4.1e-11 Score=88.30 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=70.7
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCE-EEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVH-VIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
+++||||+|.||..+++.|+++|.+ |+.+++...... ...+....++.++.++.+|++|.+++++++++ .++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 74 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN--LESLADVSDSERYVFEHADICDRAELDRIFAQ-----HQP 74 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch--HHHHHhcccCCceEEEEecCCCHHHHHHHHHh-----cCC
Confidence 5899999999999999999999975 555554321111 11111111234577889999999999998876 269
Q ss_pred cEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 105 NILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 105 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
|++||+||.... ....+..++.+++|+.|++
T Consensus 75 d~vih~A~~~~~--~~~~~~~~~~~~~N~~gt~ 105 (352)
T PRK10084 75 DAVMHLAAESHV--DRSITGPAAFIETNIVGTY 105 (352)
T ss_pred CEEEECCcccCC--cchhcCchhhhhhhhHHHH
Confidence 999999996432 1122234567888887764
No 245
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.20 E-value=6.1e-11 Score=86.16 Aligned_cols=92 Identities=27% Similarity=0.305 Sum_probs=69.2
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
+++|||++|.||..+++.|+++|++|++++|+.+.... +. ...+.++.+|+++.+++.++++ .+|
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~----~~~~~~~~~D~~~~~~l~~~~~-------~~d 66 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE----GLDVEIVEGDLRDPASLRKAVA-------GCR 66 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc----cCCceEEEeeCCCHHHHHHHHh-------CCC
Confidence 68999999999999999999999999999998665322 11 2347789999999998877765 479
Q ss_pred EEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 106 ILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 106 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
++||+++.... ..+.+...+++|+.++
T Consensus 67 ~vi~~a~~~~~----~~~~~~~~~~~n~~~~ 93 (328)
T TIGR03466 67 ALFHVAADYRL----WAPDPEEMYAANVEGT 93 (328)
T ss_pred EEEEeceeccc----CCCCHHHHHHHHHHHH
Confidence 99999985321 1122445666676654
No 246
>PLN02686 cinnamoyl-CoA reductase
Probab=99.16 E-value=5.8e-10 Score=82.99 Aligned_cols=88 Identities=17% Similarity=0.142 Sum_probs=66.5
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcC----CCCeeEEEEecCCCHHHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQN----PAAKVDVMELDLSSLASVRKFA 94 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~ 94 (138)
...+++|++|||||+|+||.++++.|+++|++|+++.|+.+..+.+ ..+.... ....+.++.+|++|.+++.+++
T Consensus 48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i 126 (367)
T PLN02686 48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAF 126 (367)
T ss_pred ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence 3457789999999999999999999999999999888876554433 2221110 0124778899999999998887
Q ss_pred HHHHhcCCCccEEEECcccC
Q 042455 95 SDFTARALPLNILINKAGIC 114 (138)
Q Consensus 95 ~~~~~~~~~id~lv~~ag~~ 114 (138)
+. +|.++|.++..
T Consensus 127 ~~-------~d~V~hlA~~~ 139 (367)
T PLN02686 127 DG-------CAGVFHTSAFV 139 (367)
T ss_pred Hh-------ccEEEecCeee
Confidence 64 57888887754
No 247
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.14 E-value=3e-10 Score=81.73 Aligned_cols=107 Identities=21% Similarity=0.233 Sum_probs=79.3
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcC-CCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQN-PAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
++++|||||+|-||...+-+|++.|+.|++++.-...........+... .+..+.++..|+.|.+.++++|++.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 5789999999999999999999999999999874443333333333322 2478999999999999999999986
Q ss_pred CccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 103 PLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|.|+|-|+..+..+ +.+...+.++.|+.|++
T Consensus 77 ~fd~V~Hfa~~~~vge--S~~~p~~Y~~nNi~gtl 109 (343)
T KOG1371|consen 77 KFDAVMHFAALAAVGE--SMENPLSYYHNNIAGTL 109 (343)
T ss_pred CCceEEeehhhhccch--hhhCchhheehhhhhHH
Confidence 5999999999764222 22333555666666543
No 248
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.13 E-value=5.2e-10 Score=77.66 Aligned_cols=95 Identities=22% Similarity=0.249 Sum_probs=71.7
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNI 106 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 106 (138)
+|||||+|-||.+++++|+++|+.|+.+.|........... ..+.++.+|+.|.+.++.+++.. .+|.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~-----~~d~ 68 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA-----NIDV 68 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc-----CceE
Confidence 68999999999999999999999988888876654332221 15889999999999999999986 7999
Q ss_pred EEECcccCCCCCccCHHHHHHHhhhcccc
Q 042455 107 LINKAGICGTPFMLSKDNIELHFATNHLG 135 (138)
Q Consensus 107 lv~~ag~~~~~~~~~~~~~~~~~~~n~~g 135 (138)
+|++|+... ...+.+.....++.|+.+
T Consensus 69 vi~~a~~~~--~~~~~~~~~~~~~~n~~~ 95 (236)
T PF01370_consen 69 VIHLAAFSS--NPESFEDPEEIIEANVQG 95 (236)
T ss_dssp EEEEBSSSS--HHHHHHSHHHHHHHHHHH
T ss_pred EEEeecccc--cccccccccccccccccc
Confidence 999999743 111223344555555543
No 249
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.13 E-value=5.4e-10 Score=79.83 Aligned_cols=98 Identities=20% Similarity=0.224 Sum_probs=76.7
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
++|||||+|-||...+++|++.|++|++++.-...-.+..... ...+++.|+.|.+.+.+++++- +||
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~id 69 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KID 69 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CCC
Confidence 6899999999999999999999999999988655444433322 1578999999999999999884 799
Q ss_pred EEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 106 ILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 106 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+||.||...-. .|.++-.+.++.|+.|++
T Consensus 70 aViHFAa~~~Vg--ESv~~Pl~Yy~NNv~gTl 99 (329)
T COG1087 70 AVVHFAASISVG--ESVQNPLKYYDNNVVGTL 99 (329)
T ss_pred EEEECccccccc--hhhhCHHHHHhhchHhHH
Confidence 999999975321 244555667777877653
No 250
>PLN02427 UDP-apiose/xylose synthase
Probab=99.13 E-value=2.9e-10 Score=84.96 Aligned_cols=86 Identities=15% Similarity=0.173 Sum_probs=63.6
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALR-GVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
.+.++++||||+|.||..+++.|+++ |++|++++|+.+............. ..++.++.+|++|.+.+.++++.
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~---- 86 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPW-SGRIQFHRINIKHDSRLEGLIKM---- 86 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccC-CCCeEEEEcCCCChHHHHHHhhc----
Confidence 34568999999999999999999998 5899999987654332211100001 13588999999999888777652
Q ss_pred CCCccEEEECcccCC
Q 042455 101 ALPLNILINKAGICG 115 (138)
Q Consensus 101 ~~~id~lv~~ag~~~ 115 (138)
+|+|||+|+...
T Consensus 87 ---~d~ViHlAa~~~ 98 (386)
T PLN02427 87 ---ADLTINLAAICT 98 (386)
T ss_pred ---CCEEEEcccccC
Confidence 699999999754
No 251
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.13 E-value=1.6e-10 Score=83.14 Aligned_cols=95 Identities=19% Similarity=0.160 Sum_probs=69.7
Q ss_pred EEeCCCCchHHHHHHHHHHCC--CEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 28 IVTGASSGIGAETTRVLALRG--VHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 28 litG~~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
|||||+|.||..++++|+++| ++|.++++....... ..+.. .....++.+|++|++++.++++. .|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~~~l~~a~~g-------~d 68 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDPESLEEALEG-------VD 68 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccHHHHHHHhcC-------Cc
Confidence 699999999999999999999 688888887654221 11111 12233899999999999888874 69
Q ss_pred EEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 106 ILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 106 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++||.|+...... ....++.+++|+.|+-
T Consensus 69 ~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~ 97 (280)
T PF01073_consen 69 VVFHTAAPVPPWG---DYPPEEYYKVNVDGTR 97 (280)
T ss_pred eEEEeCccccccC---cccHHHHHHHHHHHHH
Confidence 9999999754322 2234668888988763
No 252
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=99.10 E-value=7.4e-10 Score=83.07 Aligned_cols=79 Identities=25% Similarity=0.326 Sum_probs=62.2
Q ss_pred CCCCCCEEEEeCC----------------CCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEec
Q 042455 20 IDAAGVTAIVTGA----------------SSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELD 83 (138)
Q Consensus 20 ~~~~~k~~litG~----------------~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D 83 (138)
.++.||+++|||| +|.+|.++|+.|+.+|++|++++++.+. + .+. ....+|
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~---------~~~---~~~~~d 250 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P---------TPA---GVKRID 250 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c---------CCC---CcEEEc
Confidence 3578999999999 4559999999999999999999987521 1 111 134679
Q ss_pred CCCHHHHHHHHHHHHhcCCCccEEEECcccC
Q 042455 84 LSSLASVRKFASDFTARALPLNILINKAGIC 114 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 114 (138)
+++.+++.+.+. +.++++|++|+|||+.
T Consensus 251 v~~~~~~~~~v~---~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 251 VESAQEMLDAVL---AALPQADIFIMAAAVA 278 (399)
T ss_pred cCCHHHHHHHHH---HhcCCCCEEEEccccc
Confidence 999888877766 4568899999999985
No 253
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.08 E-value=1.3e-09 Score=76.99 Aligned_cols=82 Identities=17% Similarity=0.229 Sum_probs=60.1
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
..+++++||||+|+||.++++.|+++|++|+++.|+.++..... .. +..+.++.+|+++.. ..+.+.+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~--~~~~~~~~~Dl~d~~--~~l~~~~~--- 83 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL----PQ--DPSLQIVRADVTEGS--DKLVEAIG--- 83 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc----cc--CCceEEEEeeCCCCH--HHHHHHhh---
Confidence 34678999999999999999999999999999999876543321 11 235788999999731 12222221
Q ss_pred CCccEEEECcccC
Q 042455 102 LPLNILINKAGIC 114 (138)
Q Consensus 102 ~~id~lv~~ag~~ 114 (138)
.++|++|+++|..
T Consensus 84 ~~~d~vi~~~g~~ 96 (251)
T PLN00141 84 DDSDAVICATGFR 96 (251)
T ss_pred cCCCEEEECCCCC
Confidence 2689999999864
No 254
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=99.08 E-value=1.2e-09 Score=78.93 Aligned_cols=84 Identities=19% Similarity=0.211 Sum_probs=65.1
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEecCc---chhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVH-VIMADRNM---AAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASD 96 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~-v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 96 (138)
.+++|+++|+|+ ||+|++++..|+..|++ |.+++|+. ++++++.+++.... ..+....+|+++.++++..++
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~- 198 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA- 198 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc-
Confidence 467899999999 69999999999999985 99999987 66777666665442 334556788887777655444
Q ss_pred HHhcCCCccEEEECcccC
Q 042455 97 FTARALPLNILINKAGIC 114 (138)
Q Consensus 97 ~~~~~~~id~lv~~ag~~ 114 (138)
..|+||||..+.
T Consensus 199 ------~~DilINaTp~G 210 (289)
T PRK12548 199 ------SSDILVNATLVG 210 (289)
T ss_pred ------cCCEEEEeCCCC
Confidence 359999999765
No 255
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.07 E-value=1.9e-09 Score=72.37 Aligned_cols=71 Identities=25% Similarity=0.294 Sum_probs=62.4
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNI 106 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 106 (138)
++|+||+|.+|+.++++|+++|++|.++.|++++.++ ...+..+.+|+.|++++.+++. +.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~ 63 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA 63 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence 6899999999999999999999999999999887665 2568899999999988877766 4799
Q ss_pred EEECcccC
Q 042455 107 LINKAGIC 114 (138)
Q Consensus 107 lv~~ag~~ 114 (138)
+|+++|..
T Consensus 64 vi~~~~~~ 71 (183)
T PF13460_consen 64 VIHAAGPP 71 (183)
T ss_dssp EEECCHST
T ss_pred hhhhhhhh
Confidence 99999853
No 256
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.06 E-value=5.7e-10 Score=79.56 Aligned_cols=102 Identities=17% Similarity=0.238 Sum_probs=75.6
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCC--EEEEEecCcc--hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGV--HVIMADRNMA--AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~--~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
+++|||||+|.||..+++.++++.. +|+.++.-.- ..+.+ ..+ ....+..++++|++|.+.+.+++++-
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~---~~~~~~~fv~~DI~D~~~v~~~~~~~--- 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADV---EDSPRYRFVQGDICDRELVDRLFKEY--- 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhh---hcCCCceEEeccccCHHHHHHHHHhc---
Confidence 4689999999999999999998864 4666665321 12222 222 12457999999999999999999874
Q ss_pred CCCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
++|+++|-|+-.+ .+-+.++-...+++|+.|++
T Consensus 74 --~~D~VvhfAAESH--VDRSI~~P~~Fi~TNv~GT~ 106 (340)
T COG1088 74 --QPDAVVHFAAESH--VDRSIDGPAPFIQTNVVGTY 106 (340)
T ss_pred --CCCeEEEechhcc--ccccccChhhhhhcchHHHH
Confidence 6899999999644 34455555678889999876
No 257
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.05 E-value=1.7e-09 Score=86.07 Aligned_cols=106 Identities=13% Similarity=0.084 Sum_probs=70.5
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHC--CCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALR--GVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.+.|++|||||+|.||..+++.|+++ +++|+++++.... .. ...+........+.++.+|++|.+.+..++..
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~-~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--- 78 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SN-LKNLNPSKSSPNFKFVKGDIASADLVNYLLIT--- 78 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-ch-hhhhhhcccCCCeEEEECCCCChHHHHHHHhh---
Confidence 45689999999999999999999997 5789888875311 11 11111111134588899999999887776543
Q ss_pred cCCCccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 100 RALPLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
.++|+|||+|+...... +.++....+++|+.|+
T Consensus 79 --~~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt 111 (668)
T PLN02260 79 --EGIDTIMHFAAQTHVDN--SFGNSFEFTKNNIYGT 111 (668)
T ss_pred --cCCCEEEECCCccCchh--hhhCHHHHHHHHHHHH
Confidence 36999999999753211 1122234556666554
No 258
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.00 E-value=1.6e-09 Score=79.77 Aligned_cols=77 Identities=12% Similarity=0.152 Sum_probs=57.8
Q ss_pred CEEEEeCCCCchHHHHHHHHHHC-CCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCC-CHHHHHHHHHHHHhcCC
Q 042455 25 VTAIVTGASSGIGAETTRVLALR-GVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLS-SLASVRKFASDFTARAL 102 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~ 102 (138)
++++||||+|.||..+++.|++. |++|++++|+..... .+. +...+.++.+|++ +.+.+..+++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~---~~~~~~~~~~Dl~~~~~~~~~~~~------- 67 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLV---NHPRMHFFEGDITINKEWIEYHVK------- 67 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hhc---cCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence 46999999999999999999986 689999988654322 121 1235888899997 6666555433
Q ss_pred CccEEEECcccCC
Q 042455 103 PLNILINKAGICG 115 (138)
Q Consensus 103 ~id~lv~~ag~~~ 115 (138)
++|+|||+|+...
T Consensus 68 ~~d~ViH~aa~~~ 80 (347)
T PRK11908 68 KCDVILPLVAIAT 80 (347)
T ss_pred CCCEEEECcccCC
Confidence 4899999999753
No 259
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.99 E-value=1.3e-09 Score=78.01 Aligned_cols=80 Identities=23% Similarity=0.350 Sum_probs=61.3
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNI 106 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 106 (138)
++||||+|.||..++++|+++|++|+++.|. .+|+.+.+.+.++++.. ++|+
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d~ 53 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPDA 53 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCCE
Confidence 7999999999999999999999999998874 46999999998888763 5899
Q ss_pred EEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 107 LINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 107 lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
+||++|...... ........+++|+.++
T Consensus 54 vi~~a~~~~~~~--~~~~~~~~~~~n~~~~ 81 (287)
T TIGR01214 54 VVNTAAYTDVDG--AESDPEKAFAVNALAP 81 (287)
T ss_pred EEECCccccccc--cccCHHHHHHHHHHHH
Confidence 999999643211 1122344566666543
No 260
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.99 E-value=5.9e-10 Score=78.25 Aligned_cols=76 Identities=29% Similarity=0.364 Sum_probs=61.5
Q ss_pred HHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEEEECcccCCCCCc
Q 042455 40 TTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNILINKAGICGTPFM 119 (138)
Q Consensus 40 ~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~ 119 (138)
+|+.|+++|++|++++|+.+..+ + ..++++|++|.++++++++++. +++|+||||||...
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~---- 60 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG---- 60 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence 47899999999999999876532 1 1356899999999999998874 68999999999742
Q ss_pred cCHHHHHHHhhhcccccc
Q 042455 120 LSKDNIELHFATNHLGAF 137 (138)
Q Consensus 120 ~~~~~~~~~~~~n~~g~~ 137 (138)
.+.|++++++|+.+++
T Consensus 61 --~~~~~~~~~vN~~~~~ 76 (241)
T PRK12428 61 --TAPVELVARVNFLGLR 76 (241)
T ss_pred --CCCHHHhhhhchHHHH
Confidence 2357899999998876
No 261
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.97 E-value=4.8e-09 Score=76.51 Aligned_cols=74 Identities=18% Similarity=0.159 Sum_probs=59.7
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
+++||||+|.||..+++.|+++|++|.+++|+.++... +. ...+.++.+|++|++++.++++ .+|
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~----~~~v~~v~~Dl~d~~~l~~al~-------g~d 66 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LK----EWGAELVYGDLSLPETLPPSFK-------GVT 66 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hh----hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence 69999999999999999999999999999998654322 11 1247788999999998876665 479
Q ss_pred EEEECcccC
Q 042455 106 ILINKAGIC 114 (138)
Q Consensus 106 ~lv~~ag~~ 114 (138)
++||+++..
T Consensus 67 ~Vi~~~~~~ 75 (317)
T CHL00194 67 AIIDASTSR 75 (317)
T ss_pred EEEECCCCC
Confidence 999988743
No 262
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.97 E-value=2.6e-09 Score=84.97 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=67.4
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHH-HHHHHHHHHhc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALR-GVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLAS-VRKFASDFTAR 100 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 100 (138)
.+++++||||+|.||..+++.|+++ |++|++++|+...... +. +...+.++.+|++|... ++++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~---~~~~~~~~~gDl~d~~~~l~~~l~----- 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FL---GHPRFHFVEGDISIHSEWIEYHIK----- 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hc---CCCceEEEeccccCcHHHHHHHhc-----
Confidence 5678999999999999999999986 7999999987643221 11 12357888999998654 343332
Q ss_pred CCCccEEEECcccCCCCC-ccCHHHHHHHhhhccccc
Q 042455 101 ALPLNILINKAGICGTPF-MLSKDNIELHFATNHLGA 136 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~g~ 136 (138)
.+|++||+|+...+.. ..++ ...+++|+.++
T Consensus 382 --~~D~ViHlAa~~~~~~~~~~~---~~~~~~Nv~~t 413 (660)
T PRK08125 382 --KCDVVLPLVAIATPIEYTRNP---LRVFELDFEEN 413 (660)
T ss_pred --CCCEEEECccccCchhhccCH---HHHHHhhHHHH
Confidence 5899999999765321 1222 34556666554
No 263
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.94 E-value=2.3e-09 Score=77.65 Aligned_cols=84 Identities=19% Similarity=0.203 Sum_probs=61.3
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
++|||||+|-||..+++.|+++| +|++++|... .+..|++|.+.+.++++.. ++|
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~D 56 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RPD 56 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence 59999999999999999999999 7888777421 2357999999998888753 589
Q ss_pred EEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 106 ILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 106 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
++||+|+...... ..++-...+.+|+.++
T Consensus 57 ~Vih~Aa~~~~~~--~~~~~~~~~~~N~~~~ 85 (299)
T PRK09987 57 VIVNAAAHTAVDK--AESEPEFAQLLNATSV 85 (299)
T ss_pred EEEECCccCCcch--hhcCHHHHHHHHHHHH
Confidence 9999999754321 1112233455566554
No 264
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.94 E-value=3.4e-09 Score=76.75 Aligned_cols=94 Identities=19% Similarity=0.302 Sum_probs=60.4
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh--cCCCc
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA--RALPL 104 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~~i 104 (138)
++||||+|.||..++++|+++|++++++.|+....... .. ...+|+.|..+.+.+++.+.. .++++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~-----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN-----------LVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh-----------hhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 79999999999999999999999766665554332111 01 124566666666666665542 34679
Q ss_pred cEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 105 NILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 105 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
|+|||+||..... .... ...++.|+.++
T Consensus 70 d~Vih~A~~~~~~-~~~~---~~~~~~n~~~t 97 (308)
T PRK11150 70 EAIFHEGACSSTT-EWDG---KYMMDNNYQYS 97 (308)
T ss_pred cEEEECceecCCc-CCCh---HHHHHHHHHHH
Confidence 9999999864322 1122 23566666554
No 265
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.93 E-value=4.6e-09 Score=78.29 Aligned_cols=78 Identities=18% Similarity=0.160 Sum_probs=59.6
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
-.+++++|||++|.||.++++.|.++|++|.+++|...... ... ...+.++.+|+++.+.+..++.
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~--~~~~~~~~~Dl~d~~~~~~~~~------ 84 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SED--MFCHEFHLVDLRVMENCLKVTK------ 84 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccc--cccceEEECCCCCHHHHHHHHh------
Confidence 36789999999999999999999999999999998643210 000 1124567899999887766653
Q ss_pred CCccEEEECcccC
Q 042455 102 LPLNILINKAGIC 114 (138)
Q Consensus 102 ~~id~lv~~ag~~ 114 (138)
++|+|||+|+..
T Consensus 85 -~~D~Vih~Aa~~ 96 (370)
T PLN02695 85 -GVDHVFNLAADM 96 (370)
T ss_pred -CCCEEEEccccc
Confidence 479999999864
No 266
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.92 E-value=2.1e-08 Score=68.40 Aligned_cols=85 Identities=18% Similarity=0.255 Sum_probs=66.9
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.++++++++|+|++|++|+.+++.|++.|++|.+++|+.+++++....+.... + .....+|..+.+++.+.+.
T Consensus 24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~--~~~~~~~~~~~~~~~~~~~---- 96 (194)
T cd01078 24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-G--EGVGAVETSDDAARAAAIK---- 96 (194)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-C--CcEEEeeCCCHHHHHHHHh----
Confidence 36789999999999999999999999999999999999888877776664332 2 2345678888888776664
Q ss_pred cCCCccEEEECcccC
Q 042455 100 RALPLNILINKAGIC 114 (138)
Q Consensus 100 ~~~~id~lv~~ag~~ 114 (138)
..|++|++....
T Consensus 97 ---~~diVi~at~~g 108 (194)
T cd01078 97 ---GADVVFAAGAAG 108 (194)
T ss_pred ---cCCEEEECCCCC
Confidence 358888877643
No 267
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.92 E-value=1.2e-08 Score=75.04 Aligned_cols=87 Identities=20% Similarity=0.220 Sum_probs=57.6
Q ss_pred EEEEeCCCCchHHHHHHHHHHCC--CEEEEEecCcchhH---HHHHHHHhcCC-----C-CeeEEEEecCCCHHH--HHH
Q 042455 26 TAIVTGASSGIGAETTRVLALRG--VHVIMADRNMAAGR---DVKVAIVMQNP-----A-AKVDVMELDLSSLAS--VRK 92 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~---~~~~~l~~~~~-----~-~~~~~~~~D~~~~~~--~~~ 92 (138)
+++||||+|+||..+++.|+++| ++|+++.|+.+... .+.+.+..... . .++.++.+|++++.. -..
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 47999999999999999999998 68999999865321 22222221100 1 468899999986521 011
Q ss_pred HHHHHHhcCCCccEEEECcccCC
Q 042455 93 FASDFTARALPLNILINKAGICG 115 (138)
Q Consensus 93 ~~~~~~~~~~~id~lv~~ag~~~ 115 (138)
....+. ..+|++||||+...
T Consensus 81 ~~~~~~---~~~d~vih~a~~~~ 100 (367)
T TIGR01746 81 EWERLA---ENVDTIVHNGALVN 100 (367)
T ss_pred HHHHHH---hhCCEEEeCCcEec
Confidence 112222 36899999999653
No 268
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.91 E-value=2.8e-09 Score=76.97 Aligned_cols=94 Identities=23% Similarity=0.235 Sum_probs=67.5
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNI 106 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 106 (138)
+||||++|.||..++++|+++|++|..++|......... ..+.++.+|+++.+.+..+++.. + |.
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-d~ 67 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-DA 67 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-CE
Confidence 999999999999999999999999999999776543322 24678899999885555444432 1 99
Q ss_pred EEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 107 LINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 107 lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
+||+|+.......... .....+.+|+.++
T Consensus 68 vih~aa~~~~~~~~~~-~~~~~~~~nv~gt 96 (314)
T COG0451 68 VIHLAAQSSVPDSNAS-DPAEFLDVNVDGT 96 (314)
T ss_pred EEEccccCchhhhhhh-CHHHHHHHHHHHH
Confidence 9999997643222211 3345666676654
No 269
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.88 E-value=6e-09 Score=75.39 Aligned_cols=94 Identities=16% Similarity=0.206 Sum_probs=64.2
Q ss_pred EEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 27 AIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
+|||||+|.||..+++.|.++|+ .|++++|..... . ...+ .. ..+..|+++.+.++.+.+. .+.++|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~-----~~--~~~~~d~~~~~~~~~~~~~---~~~~~D 68 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNL-----AD--LVIADYIDKEDFLDRLEKG---AFGKIE 68 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhh-----hh--eeeeccCcchhHHHHHHhh---ccCCCC
Confidence 58999999999999999999998 788887654321 1 1111 11 2456788887776665553 346799
Q ss_pred EEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 106 ILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 106 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
++||+|+.... +.++....+++|+.++
T Consensus 69 ~vvh~A~~~~~----~~~~~~~~~~~n~~~~ 95 (314)
T TIGR02197 69 AIFHQGACSDT----TETDGEYMMENNYQYS 95 (314)
T ss_pred EEEECccccCc----cccchHHHHHHHHHHH
Confidence 99999996431 2234456677777654
No 270
>PRK05865 hypothetical protein; Provisional
Probab=98.87 E-value=1.1e-08 Score=82.92 Aligned_cols=72 Identities=22% Similarity=0.266 Sum_probs=59.3
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
+++||||+|.||.++++.|+++|++|++++|+.... + ...+.++.+|++|.+++.++++ .+|
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~vD 63 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GAD 63 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CCC
Confidence 589999999999999999999999999999874321 1 1246788999999999887775 379
Q ss_pred EEEECcccCC
Q 042455 106 ILINKAGICG 115 (138)
Q Consensus 106 ~lv~~ag~~~ 115 (138)
++||+|+...
T Consensus 64 ~VVHlAa~~~ 73 (854)
T PRK05865 64 VVAHCAWVRG 73 (854)
T ss_pred EEEECCCccc
Confidence 9999998643
No 271
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.86 E-value=2e-08 Score=75.25 Aligned_cols=78 Identities=21% Similarity=0.331 Sum_probs=61.0
Q ss_pred CCCCCEEEEeCC---------------CCc-hHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecC
Q 042455 21 DAAGVTAIVTGA---------------SSG-IGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDL 84 (138)
Q Consensus 21 ~~~~k~~litG~---------------~~~-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~ 84 (138)
+++||+++|||| ++| +|.++|+.+..+|++|++++++.... . ... ...+|+
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~--~~~~~v 248 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPG--VKSIKV 248 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCC--cEEEEe
Confidence 488999999999 556 99999999999999999988765321 1 111 246899
Q ss_pred CCHHHH-HHHHHHHHhcCCCccEEEECcccC
Q 042455 85 SSLASV-RKFASDFTARALPLNILINKAGIC 114 (138)
Q Consensus 85 ~~~~~~-~~~~~~~~~~~~~id~lv~~ag~~ 114 (138)
++.+++ ++++++. ++++|++|+|||+.
T Consensus 249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavs 276 (390)
T TIGR00521 249 STAEEMLEAALNEL---AKDFDIFISAAAVA 276 (390)
T ss_pred ccHHHHHHHHHHhh---cccCCEEEEccccc
Confidence 999988 6666453 46799999999986
No 272
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.85 E-value=7.8e-09 Score=73.87 Aligned_cols=80 Identities=30% Similarity=0.409 Sum_probs=64.9
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNI 106 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 106 (138)
+||||++|-+|.++++.|. .+++|+.++|.. +|++|.+.+.+++.+. ++|+
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv 53 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV 53 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence 8999999999999999999 667899888743 8999999999999986 7999
Q ss_pred EEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 107 LINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 107 lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+||+|++.. .+.-+.+-+..+.+|..|+.
T Consensus 54 VIn~AAyt~--vD~aE~~~e~A~~vNa~~~~ 82 (281)
T COG1091 54 VINAAAYTA--VDKAESEPELAFAVNATGAE 82 (281)
T ss_pred EEECccccc--cccccCCHHHHHHhHHHHHH
Confidence 999999753 22223334668888887753
No 273
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.84 E-value=5.7e-09 Score=75.26 Aligned_cols=81 Identities=31% Similarity=0.409 Sum_probs=57.1
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
++||||++|-||.++.+.|.+.|++++.++|. .+|++|.+.+.+++++. ++|
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~pd 53 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KPD 53 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------S
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CCC
Confidence 58999999999999999999999999888775 67999999999999886 589
Q ss_pred EEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 106 ILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 106 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
++||+||...+ +.-+++-+..+.+|+.++
T Consensus 54 ~Vin~aa~~~~--~~ce~~p~~a~~iN~~~~ 82 (286)
T PF04321_consen 54 VVINCAAYTNV--DACEKNPEEAYAINVDAT 82 (286)
T ss_dssp EEEE------H--HHHHHSHHHHHHHHTHHH
T ss_pred eEeccceeecH--HhhhhChhhhHHHhhHHH
Confidence 99999997421 111223345666676554
No 274
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.83 E-value=1.6e-08 Score=77.08 Aligned_cols=99 Identities=19% Similarity=0.239 Sum_probs=65.5
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
-.++++|||||+|.||..+++.|+++|++|+++++......+..... ....++.++..|+.+.. +
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~---~~~~~~~~i~~D~~~~~-----l------- 181 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH---FSNPNFELIRHDVVEPI-----L------- 181 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh---ccCCceEEEECCccChh-----h-------
Confidence 35689999999999999999999999999999887533222211111 11235677788886542 1
Q ss_pred CCccEEEECcccCCCCCccCHHHHHHHhhhcccccc
Q 042455 102 LPLNILINKAGICGTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 102 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
..+|+|||+|+...+... .++..+.+++|+.|+.
T Consensus 182 ~~~D~ViHlAa~~~~~~~--~~~p~~~~~~Nv~gt~ 215 (442)
T PLN02206 182 LEVDQIYHLACPASPVHY--KFNPVKTIKTNVVGTL 215 (442)
T ss_pred cCCCEEEEeeeecchhhh--hcCHHHHHHHHHHHHH
Confidence 248999999986543111 1123456777776653
No 275
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.80 E-value=6.9e-09 Score=73.72 Aligned_cols=106 Identities=15% Similarity=0.181 Sum_probs=76.0
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhc--CCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQ--NPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
+|++||||-+|-=|..+|+.|+++|+.|+.+.|.........-.|... ..+.+++++.+|++|...+.++++++
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---- 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---- 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence 689999999999999999999999999999988643322111022111 11455889999999999999999987
Q ss_pred CCccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 102 LPLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 102 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
.+|-+.|-++-. +...|.++-..+.+++..|+
T Consensus 78 -~PdEIYNLaAQS--~V~vSFe~P~~T~~~~~iGt 109 (345)
T COG1089 78 -QPDEIYNLAAQS--HVGVSFEQPEYTADVDAIGT 109 (345)
T ss_pred -Cchhheeccccc--cccccccCcceeeeechhHH
Confidence 689999998854 23334444444555555444
No 276
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.80 E-value=5.7e-08 Score=68.03 Aligned_cols=95 Identities=13% Similarity=0.254 Sum_probs=62.0
Q ss_pred EEEEeCCCC-chHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 26 TAIVTGASS-GIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 26 ~~litG~~~-~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
+-.||+.++ .+|.++|+.|+++|++|++++|+.... .. +...+.++.++ +.+++ .+.+.+.++.+
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~-~~~~v~~i~v~--s~~~m---~~~l~~~~~~~ 82 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PE-PHPNLSIIEIE--NVDDL---LETLEPLVKDH 82 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CC-CCCCeEEEEEe--cHHHH---HHHHHHHhcCC
Confidence 456776665 599999999999999999998764210 00 01234444432 22332 23333334578
Q ss_pred cEEEECcccCC--CCCccCHHHHHHHhhhccc
Q 042455 105 NILINKAGICG--TPFMLSKDNIELHFATNHL 134 (138)
Q Consensus 105 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~ 134 (138)
|++|||||+.. +....+.++|.+++++|.+
T Consensus 83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~ 114 (229)
T PRK06732 83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNEF 114 (229)
T ss_pred CEEEeCCccCCceehhhhhhhhhhhhhhhhhh
Confidence 99999999863 3345678888998888754
No 277
>PLN02778 3,5-epimerase/4-reductase
Probab=98.79 E-value=3.7e-08 Score=71.45 Aligned_cols=82 Identities=17% Similarity=0.220 Sum_probs=56.8
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
+++|||||+|.||..+++.|+++|++|.+.. .|+.+.+.+...++.. ++
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~~-----~~ 58 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDAV-----KP 58 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHhc-----CC
Confidence 5799999999999999999999999886422 2334555555555432 68
Q ss_pred cEEEECcccCCCCC-ccCHHHHHHHhhhcccccc
Q 042455 105 NILINKAGICGTPF-MLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 105 d~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~g~~ 137 (138)
|++||+||..+... +...+.-.+.+++|+.|+.
T Consensus 59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~ 92 (298)
T PLN02778 59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTL 92 (298)
T ss_pred CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHH
Confidence 99999999764321 1122334567778877653
No 278
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.77 E-value=3.7e-08 Score=74.95 Aligned_cols=96 Identities=18% Similarity=0.227 Sum_probs=64.1
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
..++++||||+|.||..+++.|+++|++|++++|...........+. ...++.++..|+.+.. + .
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---~~~~~~~~~~Di~~~~-----~-------~ 183 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---GNPRFELIRHDVVEPI-----L-------L 183 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---cCCceEEEECcccccc-----c-------c
Confidence 34689999999999999999999999999999886432222111111 1234677788886532 1 2
Q ss_pred CccEEEECcccCCCCC-ccCHHHHHHHhhhccccc
Q 042455 103 PLNILINKAGICGTPF-MLSKDNIELHFATNHLGA 136 (138)
Q Consensus 103 ~id~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~g~ 136 (138)
++|+|||+|+...+.. ..+ -...+++|+.|+
T Consensus 184 ~~D~ViHlAa~~~~~~~~~~---p~~~~~~Nv~gT 215 (436)
T PLN02166 184 EVDQIYHLACPASPVHYKYN---PVKTIKTNVMGT 215 (436)
T ss_pred CCCEEEECceeccchhhccC---HHHHHHHHHHHH
Confidence 5899999998654321 122 245667777665
No 279
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.76 E-value=4.1e-08 Score=70.24 Aligned_cols=90 Identities=18% Similarity=0.094 Sum_probs=57.4
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNI 106 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 106 (138)
+|||||+|.||..+++.|+++|++|++++|+.+...... .. . ..|+.. . .....+..+|+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~--~--~~~~~~-~-------~~~~~~~~~D~ 60 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------WE--G--YKPWAP-L-------AESEALEGADA 60 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------ce--e--eecccc-c-------chhhhcCCCCE
Confidence 589999999999999999999999999999876533211 00 0 112221 1 11223457999
Q ss_pred EEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 107 LINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 107 lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
+||+||........+.+.....+++|+.++
T Consensus 61 Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~ 90 (292)
T TIGR01777 61 VINLAGEPIADKRWTEERKQEIRDSRIDTT 90 (292)
T ss_pred EEECCCCCcccccCCHHHHHHHHhcccHHH
Confidence 999999643222233344455666666543
No 280
>PLN02996 fatty acyl-CoA reductase
Probab=98.75 E-value=7.2e-08 Score=74.41 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=67.8
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC---EEEEEecCcch---hHHHHHH---------HHhcCC-------CCeeEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV---HVIMADRNMAA---GRDVKVA---------IVMQNP-------AAKVDV 79 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~---~v~~~~r~~~~---~~~~~~~---------l~~~~~-------~~~~~~ 79 (138)
+.+|+++||||+|.||..++++|+..+. +|+++.|.... .+.+..+ ++...+ ..++.+
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 6799999999999999999999997542 68888886531 1111111 111111 146899
Q ss_pred EEecCCC-------HHHHHHHHHHHHhcCCCccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 80 MELDLSS-------LASVRKFASDFTARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 80 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
+..|+++ .+.++.+++ .+|++||+|+..... +.....+.+|+.|+
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~-----~~~~~~~~~Nv~gt 140 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD-----ERYDVALGINTLGA 140 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc-----CCHHHHHHHHHHHH
Confidence 9999984 333444433 489999999975421 23455677777665
No 281
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.73 E-value=1.5e-07 Score=74.08 Aligned_cols=103 Identities=12% Similarity=0.129 Sum_probs=68.8
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC---EEEEEecCcch--h-HHHHHH---------HHhcCC-------CCeeEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV---HVIMADRNMAA--G-RDVKVA---------IVMQNP-------AAKVDV 79 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~---~v~~~~r~~~~--~-~~~~~~---------l~~~~~-------~~~~~~ 79 (138)
+.+|+++||||+|.||..++++|+..+. +|+++.|.... . +.+..+ +++..+ ..++.+
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 4799999999999999999999998643 68888885432 2 122112 222222 246899
Q ss_pred EEecCCCHH------HHHHHHHHHHhcCCCccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 80 MELDLSSLA------SVRKFASDFTARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 80 ~~~D~~~~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
+..|++++. ..+.+.+ .+|++||+|+.... + +.++..+++|+.|+
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f--~---~~~~~a~~vNV~GT 247 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF--D---ERYDVAIDINTRGP 247 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc--c---cCHHHHHHHHHHHH
Confidence 999999873 3333222 48999999996531 1 23455677777664
No 282
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.72 E-value=4.1e-08 Score=70.43 Aligned_cols=76 Identities=16% Similarity=0.163 Sum_probs=58.8
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC-c
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP-L 104 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-i 104 (138)
+++||||+|.+|..++++|++.|++|.++.|++++... ..+....+|+.|.+++..+++.. ..+.. +
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~-----------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~ 68 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG-----------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI 68 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC-----------CCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence 37999999999999999999999999999998765321 12445678999999988887643 22334 8
Q ss_pred cEEEECccc
Q 042455 105 NILINKAGI 113 (138)
Q Consensus 105 d~lv~~ag~ 113 (138)
|.++++++.
T Consensus 69 d~v~~~~~~ 77 (285)
T TIGR03649 69 SAVYLVAPP 77 (285)
T ss_pred eEEEEeCCC
Confidence 888887764
No 283
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.68 E-value=3.1e-08 Score=71.46 Aligned_cols=60 Identities=25% Similarity=0.290 Sum_probs=49.7
Q ss_pred EEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 042455 28 IVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNIL 107 (138)
Q Consensus 28 litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 107 (138)
|||||+|.||..+++.|++.|+.|+++.+. ..+|+++.++++++++.. ++|+|
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V 53 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV 53 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence 689999999999999999999887665421 147999999988887762 58999
Q ss_pred EECcccC
Q 042455 108 INKAGIC 114 (138)
Q Consensus 108 v~~ag~~ 114 (138)
||+|+..
T Consensus 54 ih~A~~~ 60 (306)
T PLN02725 54 ILAAAKV 60 (306)
T ss_pred EEeeeee
Confidence 9999974
No 284
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.67 E-value=1.8e-07 Score=74.31 Aligned_cols=83 Identities=19% Similarity=0.111 Sum_probs=57.3
Q ss_pred EEEEeCCCCchHHHHHHHHH--HCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHH--HHHHHHHHhcC
Q 042455 26 TAIVTGASSGIGAETTRVLA--LRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASV--RKFASDFTARA 101 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~--~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~--~~~~~~~~~~~ 101 (138)
++|||||+|.||..+++.|+ ..|++|++++|+... .. ...+.......++.++.+|+++++.. ...++.+
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---- 75 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SR-LEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---- 75 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HH-HHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence 69999999999999999999 478999999996533 11 12222221124688899999985310 1122222
Q ss_pred CCccEEEECcccC
Q 042455 102 LPLNILINKAGIC 114 (138)
Q Consensus 102 ~~id~lv~~ag~~ 114 (138)
.++|++||+||..
T Consensus 76 ~~~D~Vih~Aa~~ 88 (657)
T PRK07201 76 GDIDHVVHLAAIY 88 (657)
T ss_pred cCCCEEEECceee
Confidence 3689999999964
No 285
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=98.64 E-value=1.9e-07 Score=77.05 Aligned_cols=116 Identities=15% Similarity=0.151 Sum_probs=96.2
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchh---HHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAG---RDVKVAIVMQNPAAKVDVMELDLSSLASVRKFAS 95 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 95 (138)
++...|.++|+||-||.|++++.+|.++|+ .+++++|+.-+. ...+..++.+ +.++..-..|++..+....+++
T Consensus 1764 ~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~ 1841 (2376)
T KOG1202|consen 1764 YCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIE 1841 (2376)
T ss_pred hcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHH
Confidence 345689999999999999999999999999 589999986553 2345556555 7888888899999999999998
Q ss_pred HHHhcCCCccEEEECcccCCC--CCccCHHHHHHHhhhccccccC
Q 042455 96 DFTARALPLNILINKAGICGT--PFMLSKDNIELHFATNHLGAFY 138 (138)
Q Consensus 96 ~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~g~~~ 138 (138)
+. ++++.+-+++|-|.+.++ ..+.++++|.++-+..+.|+.+
T Consensus 1842 ~s-~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~ 1885 (2376)
T KOG1202|consen 1842 ES-NKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTIN 1885 (2376)
T ss_pred Hh-hhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeee
Confidence 84 578999999999999864 5578999999998888887753
No 286
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.63 E-value=2.4e-07 Score=69.11 Aligned_cols=77 Identities=26% Similarity=0.434 Sum_probs=64.8
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCC-CEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRG-VHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
+++||.|+ |++|+.+|+.|++.| .+|.+++|+.++..++.... ..++.+.++|+.|.+.+.+++++
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~------- 68 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD------- 68 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------
Confidence 56899999 999999999999999 79999999988877655432 34789999999999998888775
Q ss_pred ccEEEECcccC
Q 042455 104 LNILINKAGIC 114 (138)
Q Consensus 104 id~lv~~ag~~ 114 (138)
.|++||++...
T Consensus 69 ~d~VIn~~p~~ 79 (389)
T COG1748 69 FDLVINAAPPF 79 (389)
T ss_pred CCEEEEeCCch
Confidence 29999998753
No 287
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.63 E-value=1.6e-07 Score=69.47 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=70.5
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRG--VHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.++.+++||||+|-+|+.++++|++.+ ..+.+++..+.......... .. ...++..+++|+.|..++.+.++
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~-~~-~~~~v~~~~~D~~~~~~i~~a~~---- 75 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT-GF-RSGRVTVILGDLLDANSISNAFQ---- 75 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh-cc-cCCceeEEecchhhhhhhhhhcc----
Confidence 457899999999999999999999988 58888888664211111111 10 15678999999999888877766
Q ss_pred cCCCccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 100 RALPLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
.. .+||+|....+.... .+-+..+++|+.|+
T Consensus 76 ---~~-~Vvh~aa~~~~~~~~--~~~~~~~~vNV~gT 106 (361)
T KOG1430|consen 76 ---GA-VVVHCAASPVPDFVE--NDRDLAMRVNVNGT 106 (361)
T ss_pred ---Cc-eEEEeccccCccccc--cchhhheeecchhH
Confidence 34 667777654322211 13456777888774
No 288
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.60 E-value=1.3e-07 Score=66.81 Aligned_cols=96 Identities=20% Similarity=0.178 Sum_probs=53.5
Q ss_pred EeCCCCchHHHHHHHHHHCCC--EEEEEecCcch---hHHHHHHHHhcC--------CCCeeEEEEecCCCHH------H
Q 042455 29 VTGASSGIGAETTRVLALRGV--HVIMADRNMAA---GRDVKVAIVMQN--------PAAKVDVMELDLSSLA------S 89 (138)
Q Consensus 29 itG~~~~iG~~~a~~l~~~g~--~v~~~~r~~~~---~~~~~~~l~~~~--------~~~~~~~~~~D~~~~~------~ 89 (138)
||||+|.||..+.++|++++. +|+++.|.... .+.+.+.+.... ...++.++.+|++++. .
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999875 89999997643 222211111110 0468999999999753 3
Q ss_pred HHHHHHHHHhcCCCccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 90 VRKFASDFTARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 90 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
.+.+.+ .+|++||||+...-.. .+.+..++|+.|+
T Consensus 81 ~~~L~~-------~v~~IiH~Aa~v~~~~-----~~~~~~~~NV~gt 115 (249)
T PF07993_consen 81 YQELAE-------EVDVIIHCAASVNFNA-----PYSELRAVNVDGT 115 (249)
T ss_dssp HHHHHH-------H--EEEE--SS-SBS------S--EEHHHHHHHH
T ss_pred hhcccc-------ccceeeecchhhhhcc-----cchhhhhhHHHHH
Confidence 344433 3799999999653111 2233555666554
No 289
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.59 E-value=6e-07 Score=57.89 Aligned_cols=78 Identities=18% Similarity=0.285 Sum_probs=58.8
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++++++|.|+ ||.|+++++.|.+.|+ +|.++.|+.++++++...+. +..+.....+ + +...+
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~----~~~~~~~~~~--~---~~~~~----- 73 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG----GVNIEAIPLE--D---LEEAL----- 73 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT----GCSEEEEEGG--G---HCHHH-----
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC----ccccceeeHH--H---HHHHH-----
Confidence 688999999998 8999999999999998 59999999999888887761 3334444432 2 22222
Q ss_pred cCCCccEEEECcccCC
Q 042455 100 RALPLNILINKAGICG 115 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~ 115 (138)
...|++|++.+...
T Consensus 74 --~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 74 --QEADIVINATPSGM 87 (135)
T ss_dssp --HTESEEEE-SSTTS
T ss_pred --hhCCeEEEecCCCC
Confidence 25799999998754
No 290
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.56 E-value=4.6e-07 Score=69.09 Aligned_cols=77 Identities=14% Similarity=0.228 Sum_probs=58.2
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCc-chhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNM-AAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++|+++|+|+++ +|.++|+.|++.|++|.+++++. +..++...++... .+.++..|..+ +
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~------------~ 64 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPE------------E 64 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcch------------h
Confidence 57899999999877 99999999999999999999975 3444444445332 24567777765 1
Q ss_pred cCCCccEEEECcccC
Q 042455 100 RALPLNILINKAGIC 114 (138)
Q Consensus 100 ~~~~id~lv~~ag~~ 114 (138)
..+.+|++|+++|+.
T Consensus 65 ~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 65 FLEGVDLVVVSPGVP 79 (450)
T ss_pred HhhcCCEEEECCCCC
Confidence 124689999999974
No 291
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.54 E-value=3.3e-07 Score=68.64 Aligned_cols=76 Identities=28% Similarity=0.459 Sum_probs=59.2
Q ss_pred EEEeCCCCchHHHHHHHHHHCC-C-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 27 AIVTGASSGIGAETTRVLALRG-V-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g-~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
|+|.|+ |.+|..+++.|++.+ . +|++.+|+.+++++...++ ...++...++|+.|.+++.+++++ -
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~~-------~ 68 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLRG-------C 68 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHTT-------S
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHhc-------C
Confidence 689999 999999999999986 4 8999999999988877654 257899999999999998888764 4
Q ss_pred cEEEECcccC
Q 042455 105 NILINKAGIC 114 (138)
Q Consensus 105 d~lv~~ag~~ 114 (138)
|++||++|..
T Consensus 69 dvVin~~gp~ 78 (386)
T PF03435_consen 69 DVVINCAGPF 78 (386)
T ss_dssp SEEEE-SSGG
T ss_pred CEEEECCccc
Confidence 9999999853
No 292
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.53 E-value=1.2e-06 Score=61.20 Aligned_cols=75 Identities=20% Similarity=0.223 Sum_probs=57.8
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNI 106 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 106 (138)
++|+||+|.+|+.+++.|++.+++|.++.|+... ...+.++.. + +..+.+|+.|.+++.++++ .+|.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~--g--~~vv~~d~~~~~~l~~al~-------g~d~ 67 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL--G--AEVVEADYDDPESLVAALK-------GVDA 67 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT--T--TEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc--c--ceEeecccCCHHHHHHHHc-------CCce
Confidence 6899999999999999999999999999998733 233444433 3 3566999999998877776 5799
Q ss_pred EEECcccC
Q 042455 107 LINKAGIC 114 (138)
Q Consensus 107 lv~~ag~~ 114 (138)
++.+.+..
T Consensus 68 v~~~~~~~ 75 (233)
T PF05368_consen 68 VFSVTPPS 75 (233)
T ss_dssp EEEESSCS
T ss_pred EEeecCcc
Confidence 99888854
No 293
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.52 E-value=4.7e-07 Score=72.28 Aligned_cols=83 Identities=16% Similarity=0.199 Sum_probs=60.7
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
.+++||||++|-||.++++.|.++|++|.. ...|++|.+.+.+++... +
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------------~~~~l~d~~~v~~~i~~~-----~ 428 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------------GKGRLEDRSSLLADIRNV-----K 428 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------------eccccccHHHHHHHHHhh-----C
Confidence 347999999999999999999999987621 113577888887777653 6
Q ss_pred ccEEEECcccCCCC-CccCHHHHHHHhhhcccccc
Q 042455 104 LNILINKAGICGTP-FMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 104 id~lv~~ag~~~~~-~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|+|||+|+..+.. .+...++-...+++|+.|+.
T Consensus 429 pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~ 463 (668)
T PLN02260 429 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTL 463 (668)
T ss_pred CCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHH
Confidence 89999999976432 22333445677888887753
No 294
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.49 E-value=1.2e-06 Score=62.70 Aligned_cols=84 Identities=26% Similarity=0.283 Sum_probs=68.2
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
.+|-++-+.||+|.+|+.++.+|++.|..|++=+|..+.- ..+++....-+++.++..|+.|+++++++++..
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~---~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~s---- 131 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD---PRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHS---- 131 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc---hhheeecccccceeeeccCCCCHHHHHHHHHhC----
Confidence 5667888999999999999999999999999998865431 223333333478999999999999999998864
Q ss_pred CCccEEEECcccCC
Q 042455 102 LPLNILINKAGICG 115 (138)
Q Consensus 102 ~~id~lv~~ag~~~ 115 (138)
+++||..|.-.
T Consensus 132 ---NVVINLIGrd~ 142 (391)
T KOG2865|consen 132 ---NVVINLIGRDY 142 (391)
T ss_pred ---cEEEEeecccc
Confidence 89999999753
No 295
>PLN00016 RNA-binding protein; Provisional
Probab=98.45 E-value=9.6e-07 Score=65.98 Aligned_cols=79 Identities=16% Similarity=0.239 Sum_probs=53.5
Q ss_pred CCCCEEEEe----CCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHH-------HHHHhcCCCCeeEEEEecCCCHHHH
Q 042455 22 AAGVTAIVT----GASSGIGAETTRVLALRGVHVIMADRNMAAGRDVK-------VAIVMQNPAAKVDVMELDLSSLASV 90 (138)
Q Consensus 22 ~~~k~~lit----G~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~D~~~~~~~ 90 (138)
...++++|| ||+|.||..+++.|+++|++|.+++|+........ .++. ...+.++.+|+.| +
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d---~ 122 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD---V 122 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH---H
Confidence 345789999 99999999999999999999999999865432110 1111 1226677777755 3
Q ss_pred HHHHHHHHhcCCCccEEEECcc
Q 042455 91 RKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 91 ~~~~~~~~~~~~~id~lv~~ag 112 (138)
..++. ...+|++|++++
T Consensus 123 ~~~~~-----~~~~d~Vi~~~~ 139 (378)
T PLN00016 123 KSKVA-----GAGFDVVYDNNG 139 (378)
T ss_pred Hhhhc-----cCCccEEEeCCC
Confidence 22221 135777777765
No 296
>PRK12320 hypothetical protein; Provisional
Probab=98.41 E-value=1.6e-06 Score=69.20 Aligned_cols=70 Identities=21% Similarity=0.227 Sum_probs=54.5
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
++|||||+|.||..+++.|+++|++|++++|.... . . ...+.++.+|+++.. +.+++ .++|
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-------~--~--~~~ve~v~~Dl~d~~-l~~al-------~~~D 62 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-------A--L--DPRVDYVCASLRNPV-LQELA-------GEAD 62 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-------c--c--cCCceEEEccCCCHH-HHHHh-------cCCC
Confidence 59999999999999999999999999999986432 0 0 234678899999873 33332 2589
Q ss_pred EEEECcccC
Q 042455 106 ILINKAGIC 114 (138)
Q Consensus 106 ~lv~~ag~~ 114 (138)
++||+|+..
T Consensus 63 ~VIHLAa~~ 71 (699)
T PRK12320 63 AVIHLAPVD 71 (699)
T ss_pred EEEEcCccC
Confidence 999999864
No 297
>PRK09620 hypothetical protein; Provisional
Probab=98.38 E-value=1e-06 Score=61.70 Aligned_cols=82 Identities=18% Similarity=0.222 Sum_probs=51.2
Q ss_pred CCCCEEEEeCCC----------------CchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCC
Q 042455 22 AAGVTAIVTGAS----------------SGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLS 85 (138)
Q Consensus 22 ~~~k~~litG~~----------------~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 85 (138)
|.||++|||+|. |-+|.++|+.|+.+|++|+++++....... .+ .+...+..+..+.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~---~~~~~~~~V~s~~- 73 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI---NNQLELHPFEGII- 73 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc---CCceeEEEEecHH-
Confidence 468999999886 889999999999999999988764221110 00 0012233333322
Q ss_pred CHHHHHHHHHHHHhcCCCccEEEECcccC
Q 042455 86 SLASVRKFASDFTARALPLNILINKAGIC 114 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 114 (138)
++...+.++... .++|++||+|++.
T Consensus 74 ---d~~~~l~~~~~~-~~~D~VIH~AAvs 98 (229)
T PRK09620 74 ---DLQDKMKSIITH-EKVDAVIMAAAGS 98 (229)
T ss_pred ---HHHHHHHHHhcc-cCCCEEEECcccc
Confidence 222233333321 2589999999985
No 298
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=98.32 E-value=4.2e-06 Score=61.44 Aligned_cols=82 Identities=18% Similarity=0.207 Sum_probs=69.0
Q ss_pred EEEEeCCCCchHHHHHHHHHH----CCCEEEEEecCcchhHHHHHHHHhcCCC--CeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 26 TAIVTGASSGIGAETTRVLAL----RGVHVIMADRNMAAGRDVKVAIVMQNPA--AKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
-++|-||+|--|..++.++.+ .|..+.+.+||++++++......+..+. .....+-||.+|++++..+..+.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~-- 84 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA-- 84 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence 478999999999999999998 6889999999999999988877655421 22337889999999999998875
Q ss_pred cCCCccEEEECcccC
Q 042455 100 RALPLNILINKAGIC 114 (138)
Q Consensus 100 ~~~~id~lv~~ag~~ 114 (138)
.++|||+|..
T Consensus 85 -----~vivN~vGPy 94 (423)
T KOG2733|consen 85 -----RVIVNCVGPY 94 (423)
T ss_pred -----EEEEeccccc
Confidence 7999999975
No 299
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.29 E-value=5.6e-06 Score=58.66 Aligned_cols=73 Identities=29% Similarity=0.286 Sum_probs=59.3
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
.++||||+|.+|..++++|++.|++|.+..|+.+++.... ..+.+...|+.++..+...++ .++
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~~ 65 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GVD 65 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence 5899999999999999999999999999999988766533 346788889998888777665 357
Q ss_pred EEEECcccC
Q 042455 106 ILINKAGIC 114 (138)
Q Consensus 106 ~lv~~ag~~ 114 (138)
.+++..+..
T Consensus 66 ~~~~i~~~~ 74 (275)
T COG0702 66 GVLLISGLL 74 (275)
T ss_pred EEEEEeccc
Confidence 776666643
No 300
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.28 E-value=4.4e-06 Score=61.61 Aligned_cols=74 Identities=20% Similarity=0.295 Sum_probs=53.9
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHC-CC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALR-GV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~-g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
++++|+++||||+|.||..+|++|+.+ |. +++++.|+.+++.++..++. ..++. ++.+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-----------~~~i~---~l~~------ 211 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-----------GGKIL---SLEE------ 211 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-----------cccHH---hHHH------
Confidence 688999999999999999999999864 64 89999998877766554431 11222 2222
Q ss_pred hcCCCccEEEECcccCC
Q 042455 99 ARALPLNILINKAGICG 115 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~ 115 (138)
.+...|++|+.++...
T Consensus 212 -~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 212 -ALPEADIVVWVASMPK 227 (340)
T ss_pred -HHccCCEEEECCcCCc
Confidence 2235799999998743
No 301
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.23 E-value=1.6e-05 Score=58.94 Aligned_cols=83 Identities=23% Similarity=0.256 Sum_probs=57.2
Q ss_pred CEEEEeCCCCchHHHHHHHHHHC-CCEEEEEecCcc--h-hHHHHHHHH-----hcCCCCeeEEEEecCCCH------HH
Q 042455 25 VTAIVTGASSGIGAETTRVLALR-GVHVIMADRNMA--A-GRDVKVAIV-----MQNPAAKVDVMELDLSSL------AS 89 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~-g~~v~~~~r~~~--~-~~~~~~~l~-----~~~~~~~~~~~~~D~~~~------~~ 89 (138)
+++++|||+|-||..+...|+.+ ..+|++.-|-++ . ...+.+.+. ......++..+..|++.+ ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 47899999999999999999976 459999888544 2 222222222 111157899999999843 33
Q ss_pred HHHHHHHHHhcCCCccEEEECcccC
Q 042455 90 VRKFASDFTARALPLNILINKAGIC 114 (138)
Q Consensus 90 ~~~~~~~~~~~~~~id~lv~~ag~~ 114 (138)
...+.+ .+|.+|||++..
T Consensus 81 ~~~La~-------~vD~I~H~gA~V 98 (382)
T COG3320 81 WQELAE-------NVDLIIHNAALV 98 (382)
T ss_pred HHHHhh-------hcceEEecchhh
Confidence 444443 479999999975
No 302
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.20 E-value=4e-06 Score=59.96 Aligned_cols=99 Identities=14% Similarity=0.222 Sum_probs=65.8
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
...+++++||||+|.||..+|.+|..+|..|++++.-........... .....+..+.-|+..+ ++.+
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~---~~~~~fel~~hdv~~p-----l~~e---- 91 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW---IGHPNFELIRHDVVEP-----LLKE---- 91 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh---ccCcceeEEEeechhH-----HHHH----
Confidence 456799999999999999999999999999999876443322222211 2234566666676544 4443
Q ss_pred CCCccEEEECcccCCC-CCccCHHHHHHHhhhcccccc
Q 042455 101 ALPLNILINKAGICGT-PFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~g~~ 137 (138)
+|.++|.|...+| .+..++ .+++.+|+.++.
T Consensus 92 ---vD~IyhLAapasp~~y~~np---vktIktN~igtl 123 (350)
T KOG1429|consen 92 ---VDQIYHLAAPASPPHYKYNP---VKTIKTNVIGTL 123 (350)
T ss_pred ---hhhhhhhccCCCCcccccCc---cceeeecchhhH
Confidence 5888998887654 344443 235666666553
No 303
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.17 E-value=3.4e-06 Score=59.98 Aligned_cols=37 Identities=24% Similarity=0.314 Sum_probs=33.7
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
++||||+|-||.+++..|.+.|..|.++.|++.+...
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~ 37 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ 37 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh
Confidence 5899999999999999999999999999999877543
No 304
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.16 E-value=8.1e-06 Score=62.27 Aligned_cols=78 Identities=14% Similarity=0.209 Sum_probs=52.9
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++.+|+++|||+++ +|.++|+.|++.|++|++.+++..........+... +.+ +.... +...+ +.
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g~~--~~~~~--~~~~~---~~----- 66 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--GIK--VICGS--HPLEL---LD----- 66 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--CCE--EEeCC--CCHHH---hc-----
Confidence 46789999999976 999999999999999999988765444444445433 322 22211 11111 11
Q ss_pred CCCccEEEECcccC
Q 042455 101 ALPLNILINKAGIC 114 (138)
Q Consensus 101 ~~~id~lv~~ag~~ 114 (138)
..+|++|+++|+.
T Consensus 67 -~~~d~vV~s~gi~ 79 (447)
T PRK02472 67 -EDFDLMVKNPGIP 79 (447)
T ss_pred -CcCCEEEECCCCC
Confidence 1489999999985
No 305
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=98.14 E-value=5.2e-06 Score=63.24 Aligned_cols=107 Identities=20% Similarity=0.178 Sum_probs=68.2
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCC--C-EEEEEecCcc--hh---------HHHHHHHHhcCCC--CeeEEEEecCC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRG--V-HVIMADRNMA--AG---------RDVKVAIVMQNPA--AKVDVMELDLS 85 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g--~-~v~~~~r~~~--~~---------~~~~~~l~~~~~~--~~~~~~~~D~~ 85 (138)
+.+|+++||||+|.+|+-++.+|+..- . ++++.-|... .. +.+.+.+++..|. .++..+.+|++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 679999999999999999999999752 2 7888776431 11 1223333444332 67888899998
Q ss_pred CHHHH-H-HHHHHHHhcCCCccEEEECcccCCCCCccCHHHHHHHhhhccccc
Q 042455 86 SLASV-R-KFASDFTARALPLNILINKAGICGTPFMLSKDNIELHFATNHLGA 136 (138)
Q Consensus 86 ~~~~~-~-~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~g~ 136 (138)
+++-- + .-.+.+. ..+|++||+|+-.+ -.|-++..+.+|..|+
T Consensus 90 ~~~LGis~~D~~~l~---~eV~ivih~AAtvr-----Fde~l~~al~iNt~Gt 134 (467)
T KOG1221|consen 90 EPDLGISESDLRTLA---DEVNIVIHSAATVR-----FDEPLDVALGINTRGT 134 (467)
T ss_pred CcccCCChHHHHHHH---hcCCEEEEeeeeec-----cchhhhhhhhhhhHhH
Confidence 65421 1 1111111 36899999999543 1233455666777664
No 306
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.13 E-value=2.8e-05 Score=50.87 Aligned_cols=76 Identities=14% Similarity=0.306 Sum_probs=55.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRG-VHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++++++|+|+ +++|.++++.|.+.| .+|.+++|+.++.++..+++.... +..+.++.++.
T Consensus 16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~--------- 78 (155)
T cd01065 16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-------IAIAYLDLEEL--------- 78 (155)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-------cceeecchhhc---------
Confidence 467889999998 799999999999986 689999999888777666553210 12233333322
Q ss_pred cCCCccEEEECcccC
Q 042455 100 RALPLNILINKAGIC 114 (138)
Q Consensus 100 ~~~~id~lv~~ag~~ 114 (138)
....|++|+++...
T Consensus 79 -~~~~Dvvi~~~~~~ 92 (155)
T cd01065 79 -LAEADLIINTTPVG 92 (155)
T ss_pred -cccCCEEEeCcCCC
Confidence 24689999999864
No 307
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=98.04 E-value=5.3e-05 Score=54.30 Aligned_cols=75 Identities=15% Similarity=0.290 Sum_probs=54.7
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
..+|+++|+|+ ||+|+++++.|++.|++|.+++|+.++.+++.+.+... + .+.....+ .. ..
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~--~-~~~~~~~~-----~~---------~~ 176 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY--G-EIQAFSMD-----EL---------PL 176 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc--C-ceEEechh-----hh---------cc
Confidence 45789999999 69999999999999999999999988887777665432 1 12222111 10 12
Q ss_pred CCccEEEECcccC
Q 042455 102 LPLNILINKAGIC 114 (138)
Q Consensus 102 ~~id~lv~~ag~~ 114 (138)
...|++||+.+..
T Consensus 177 ~~~DivInatp~g 189 (270)
T TIGR00507 177 HRVDLIINATSAG 189 (270)
T ss_pred cCccEEEECCCCC
Confidence 3589999999875
No 308
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=98.03 E-value=6.9e-05 Score=55.45 Aligned_cols=83 Identities=16% Similarity=0.330 Sum_probs=62.5
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc---------------------chhHHHHHHHHhcCCCCeeE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM---------------------AAGRDVKVAIVMQNPAAKVD 78 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~ 78 (138)
.+.+++++|+|+ ||+|..+++.|+..|. ++.+++++. .+++.+.+.+++..|..++.
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 367889999998 6899999999999998 899998863 35566667787777888888
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 79 VMELDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 79 ~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
.+..|++ .+.++.++ ...|++|.+..
T Consensus 100 ~~~~~~~-~~~~~~~~-------~~~DlVid~~D 125 (338)
T PRK12475 100 PVVTDVT-VEELEELV-------KEVDLIIDATD 125 (338)
T ss_pred EEeccCC-HHHHHHHh-------cCCCEEEEcCC
Confidence 8888885 33444432 24577777664
No 309
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=98.00 E-value=8.3e-05 Score=58.39 Aligned_cols=95 Identities=19% Similarity=0.164 Sum_probs=71.6
Q ss_pred CCCCCCEEEEeCCC-CchHHHHHHHHHHCCCEEEEEecCcch-hHHHHHHHHhcC--CCCeeEEEEecCCCHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGAS-SGIGAETTRVLALRGVHVIMADRNMAA-GRDVKVAIVMQN--PAAKVDVMELDLSSLASVRKFAS 95 (138)
Q Consensus 20 ~~~~~k~~litG~~-~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~ 95 (138)
.....|.+||||++ ++||.+++..|++.|++|+++..+-.+ ..+..+.|-..+ ++..+..+.+++.+..+++++++
T Consensus 392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe 471 (866)
T COG4982 392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE 471 (866)
T ss_pred CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence 45678999999997 789999999999999999998776433 333444443332 35678888999999999999999
Q ss_pred HHHhcCC--------------CccEEEECcccC
Q 042455 96 DFTARAL--------------PLNILINKAGIC 114 (138)
Q Consensus 96 ~~~~~~~--------------~id~lv~~ag~~ 114 (138)
.+..+.. .++.++-.|...
T Consensus 472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~ 504 (866)
T COG4982 472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPR 504 (866)
T ss_pred HhccccccccCCcceecccccCcceeeecccCC
Confidence 8765321 267777777653
No 310
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.99 E-value=5.4e-05 Score=64.92 Aligned_cols=90 Identities=21% Similarity=0.204 Sum_probs=58.8
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCC----CEEEEEecCcchhHH---HHHHHHhcC-----CCCeeEEEEecCCCHHHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRG----VHVIMADRNMAAGRD---VKVAIVMQN-----PAAKVDVMELDLSSLASV 90 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g----~~v~~~~r~~~~~~~---~~~~l~~~~-----~~~~~~~~~~D~~~~~~~ 90 (138)
..++++|||++|.||..+++.|++++ ++|+++.|+...... +...+.... ...++.++.+|++++.--
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 35789999999999999999999887 689998887544322 111111110 013688899999754210
Q ss_pred --HHHHHHHHhcCCCccEEEECcccCC
Q 042455 91 --RKFASDFTARALPLNILINKAGICG 115 (138)
Q Consensus 91 --~~~~~~~~~~~~~id~lv~~ag~~~ 115 (138)
...++++. ..+|++||+|+...
T Consensus 1050 l~~~~~~~l~---~~~d~iiH~Aa~~~ 1073 (1389)
T TIGR03443 1050 LSDEKWSDLT---NEVDVIIHNGALVH 1073 (1389)
T ss_pred cCHHHHHHHH---hcCCEEEECCcEec
Confidence 11222222 35899999999653
No 311
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.99 E-value=8.8e-05 Score=51.01 Aligned_cols=83 Identities=13% Similarity=0.253 Sum_probs=61.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVM 80 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 80 (138)
.+.+++++|.|+ ||+|..+++.|+..|. ++.+++.+ ..+++.+.+.+....|..++..+
T Consensus 18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~ 96 (202)
T TIGR02356 18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL 96 (202)
T ss_pred HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 467889999986 6999999999999998 89999876 34566667777777777777777
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 81 ELDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 81 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
...+.+ +.+..++ ...|++|.+..
T Consensus 97 ~~~i~~-~~~~~~~-------~~~D~Vi~~~d 120 (202)
T TIGR02356 97 KERVTA-ENLELLI-------NNVDLVLDCTD 120 (202)
T ss_pred hhcCCH-HHHHHHH-------hCCCEEEECCC
Confidence 666643 3333332 24688887764
No 312
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.97 E-value=9.1e-05 Score=53.57 Aligned_cols=51 Identities=24% Similarity=0.261 Sum_probs=44.2
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcC
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQN 72 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~ 72 (138)
...+|+++|.|+ ||.|++++..|+..|+ +|.+++|+.++++.+.+.+....
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~ 175 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF 175 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence 467889999998 6899999999999998 79999999999988887775543
No 313
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.96 E-value=6.4e-05 Score=50.68 Aligned_cols=72 Identities=21% Similarity=0.208 Sum_probs=59.0
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
++.|+||+|-.|..+.++..++|..|.++.||+.+.... ..+...+.|+.|++++.+.+. ..|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~D 64 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GHD 64 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CCc
Confidence 477899999999999999999999999999998775431 235678899999988755544 579
Q ss_pred EEEECcccC
Q 042455 106 ILINKAGIC 114 (138)
Q Consensus 106 ~lv~~ag~~ 114 (138)
++|..-|..
T Consensus 65 aVIsA~~~~ 73 (211)
T COG2910 65 AVISAFGAG 73 (211)
T ss_pred eEEEeccCC
Confidence 999988865
No 314
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.95 E-value=0.00034 Score=44.90 Aligned_cols=80 Identities=20% Similarity=0.397 Sum_probs=62.8
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEEEec
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVMELD 83 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D 83 (138)
.++++|.|+ |++|..+++.|+..|. ++.+++.+ ..+.+.+...+.+..|..++..+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 467888888 6999999999999998 79998763 24567778888888889999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 84 LSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
+ +.+....+++ ..|++|.+..
T Consensus 81 ~-~~~~~~~~~~-------~~d~vi~~~d 101 (135)
T PF00899_consen 81 I-DEENIEELLK-------DYDIVIDCVD 101 (135)
T ss_dssp C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred c-cccccccccc-------CCCEEEEecC
Confidence 8 4555555553 4699988765
No 315
>PRK06849 hypothetical protein; Provisional
Probab=97.92 E-value=0.00026 Score=53.27 Aligned_cols=83 Identities=18% Similarity=0.152 Sum_probs=54.1
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
+.+++||||++..+|+.+++.|.+.|++|++++.++.......... .....+...-.+.+...+.+.++.++.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~- 75 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE- 75 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence 4689999999999999999999999999999998865433211111 112222222234444444444444443
Q ss_pred CccEEEECcc
Q 042455 103 PLNILINKAG 112 (138)
Q Consensus 103 ~id~lv~~ag 112 (138)
++|++|....
T Consensus 76 ~id~vIP~~e 85 (389)
T PRK06849 76 NIDLLIPTCE 85 (389)
T ss_pred CCCEEEECCh
Confidence 5899998776
No 316
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.85 E-value=0.00012 Score=52.78 Aligned_cols=79 Identities=20% Similarity=0.335 Sum_probs=57.7
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
.+.+++.++|.|+ ||-+++++..|++.|+ ++.++.|+.++++++.+.+.... ..+. ..+..+.+..+
T Consensus 122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~--~~~~--~~~~~~~~~~~------- 189 (283)
T COG0169 122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG--AAVE--AAALADLEGLE------- 189 (283)
T ss_pred cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--cccc--ccccccccccc-------
Confidence 4557899999998 6999999999999996 89999999999999888776542 1111 12222222111
Q ss_pred hcCCCccEEEECcccC
Q 042455 99 ARALPLNILINKAGIC 114 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~ 114 (138)
..|++||+..+.
T Consensus 190 ----~~dliINaTp~G 201 (283)
T COG0169 190 ----EADLLINATPVG 201 (283)
T ss_pred ----ccCEEEECCCCC
Confidence 469999999876
No 317
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.84 E-value=0.00025 Score=51.24 Aligned_cols=81 Identities=17% Similarity=0.221 Sum_probs=56.5
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
+.++|+++|.|+ ||-+++++..|++.|+ ++.++.|+.++++++.+.+....+...+. ..+ ........
T Consensus 124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~---~~~~~~~~----- 192 (283)
T PRK14027 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVD---ARGIEDVI----- 192 (283)
T ss_pred CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecC---HhHHHHHH-----
Confidence 356899999998 7999999999999997 79999999999888877765433221121 122 22222111
Q ss_pred cCCCccEEEECcccC
Q 042455 100 RALPLNILINKAGIC 114 (138)
Q Consensus 100 ~~~~id~lv~~ag~~ 114 (138)
...|++||+..+.
T Consensus 193 --~~~divINaTp~G 205 (283)
T PRK14027 193 --AAADGVVNATPMG 205 (283)
T ss_pred --hhcCEEEEcCCCC
Confidence 2479999998764
No 318
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.84 E-value=0.00021 Score=53.63 Aligned_cols=82 Identities=18% Similarity=0.347 Sum_probs=60.5
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVME 81 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 81 (138)
+.+++++|.|+ ||+|..+++.|+..|. ++.+++++ ..+++.+.+.+.+..|..++..+.
T Consensus 133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 57788998976 7999999999999998 79999886 456777777887777777776666
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 82 LDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 82 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
..+++ +.+..+++ ..|++|++..
T Consensus 212 ~~~~~-~~~~~~~~-------~~D~Vv~~~d 234 (376)
T PRK08762 212 ERVTS-DNVEALLQ-------DVDVVVDGAD 234 (376)
T ss_pred ccCCh-HHHHHHHh-------CCCEEEECCC
Confidence 55542 33333332 3688887765
No 319
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.84 E-value=0.00035 Score=48.91 Aligned_cols=83 Identities=16% Similarity=0.327 Sum_probs=61.1
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVM 80 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 80 (138)
.+.+++++|.|+ ||+|.++++.|+..|. ++.+++.+ ..+.+.+.+.+++..|..++..+
T Consensus 18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 467889999986 6999999999999998 78888542 23566677778888877788888
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 81 ELDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 81 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
..+++ .+.+..++. ..|++|.+..
T Consensus 97 ~~~i~-~~~~~~~~~-------~~DvVi~~~d 120 (228)
T cd00757 97 NERLD-AENAEELIA-------GYDLVLDCTD 120 (228)
T ss_pred cceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence 77774 344433332 4688887765
No 320
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.83 E-value=0.00011 Score=55.87 Aligned_cols=77 Identities=14% Similarity=0.248 Sum_probs=55.7
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
.++++|+++|.|+ |++|..+++.|...|+ ++.++.|+.++++.+..++. ... +...++....
T Consensus 177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~~-------~~~~~~l~~~----- 239 (414)
T PRK13940 177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NAS-------AHYLSELPQL----- 239 (414)
T ss_pred cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CCe-------EecHHHHHHH-----
Confidence 3578999999999 8999999999999996 79999999888776665441 111 1122233222
Q ss_pred hcCCCccEEEECcccCC
Q 042455 99 ARALPLNILINKAGICG 115 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~ 115 (138)
....|++|++.+...
T Consensus 240 --l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 240 --IKKADIIIAAVNVLE 254 (414)
T ss_pred --hccCCEEEECcCCCC
Confidence 235799999999754
No 321
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.80 E-value=0.0002 Score=51.72 Aligned_cols=80 Identities=20% Similarity=0.157 Sum_probs=55.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++++|+++|.|+ ||.+++++..|++.|+ +|.++.|+.++++++...+... ..+. . +...+++. .
T Consensus 122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~---~~~~--~--~~~~~~~~-------~ 186 (282)
T TIGR01809 122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV---GVIT--R--LEGDSGGL-------A 186 (282)
T ss_pred ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc---Ccce--e--ccchhhhh-------h
Confidence 357899999987 7999999999999997 7999999998888877665321 1111 1 11112221 1
Q ss_pred cCCCccEEEECcccCC
Q 042455 100 RALPLNILINKAGICG 115 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~ 115 (138)
.....|++||+..+..
T Consensus 187 ~~~~~DiVInaTp~g~ 202 (282)
T TIGR01809 187 IEKAAEVLVSTVPADV 202 (282)
T ss_pred cccCCCEEEECCCCCC
Confidence 1245799999988754
No 322
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.80 E-value=0.00056 Score=48.48 Aligned_cols=83 Identities=16% Similarity=0.317 Sum_probs=59.5
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------chhHHHHHHHHhcCCCCeeEEE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM-------------------AAGRDVKVAIVMQNPAAKVDVM 80 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 80 (138)
.+.+++++|.|+ ||+|..+++.|+..|. ++.+++.+. .+.+.+.+.+.+..|..++..+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~ 107 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI 107 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 367889999998 8999999999999997 788886632 3455566777777777778777
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 81 ELDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 81 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
...++ .+.+..++ ...|++|.+..
T Consensus 108 ~~~i~-~~~~~~~~-------~~~DiVi~~~D 131 (245)
T PRK05690 108 NARLD-DDELAALI-------AGHDLVLDCTD 131 (245)
T ss_pred eccCC-HHHHHHHH-------hcCCEEEecCC
Confidence 76665 23333332 24577777664
No 323
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.79 E-value=0.00021 Score=48.53 Aligned_cols=77 Identities=19% Similarity=0.258 Sum_probs=46.5
Q ss_pred CCCCEEEEeCC----------------CCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCC
Q 042455 22 AAGVTAIVTGA----------------SSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLS 85 (138)
Q Consensus 22 ~~~k~~litG~----------------~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 85 (138)
+.||++|||+| +|-.|.++|+.+...|++|.++..... ... ...+.. .++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~----------p~~~~~--i~v~ 67 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP----------PPGVKV--IRVE 67 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEE--EE-S
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc----------cccceE--EEec
Confidence 35777887754 356999999999999999999887632 110 122333 4455
Q ss_pred CHHHHHHHHHHHHhcCCCccEEEECcccC
Q 042455 86 SLASVRKFASDFTARALPLNILINKAGIC 114 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 114 (138)
+.+++...+.+.. ..-|++|.+|++.
T Consensus 68 sa~em~~~~~~~~---~~~Di~I~aAAVs 93 (185)
T PF04127_consen 68 SAEEMLEAVKELL---PSADIIIMAAAVS 93 (185)
T ss_dssp SHHHHHHHHHHHG---GGGSEEEE-SB--
T ss_pred chhhhhhhhcccc---CcceeEEEecchh
Confidence 6677666665544 3459999999985
No 324
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.76 E-value=0.00042 Score=50.26 Aligned_cols=80 Identities=21% Similarity=0.290 Sum_probs=56.9
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.+++++|+|+++++|+++++.+...|++++++++++++.+.+ .. . +.. ...|..+.+....+.+.... .
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~--~~~---~~~~~~~~~~~~~~~~~~~~--~ 234 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KE---L--GAD---YVIDYRKEDFVREVRELTGK--R 234 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---c--CCC---eEEecCChHHHHHHHHHhCC--C
Confidence 578999999999999999999999999999998887664433 11 1 221 12455565665555544322 3
Q ss_pred CccEEEECccc
Q 042455 103 PLNILINKAGI 113 (138)
Q Consensus 103 ~id~lv~~ag~ 113 (138)
++|++++++|.
T Consensus 235 ~~d~~i~~~g~ 245 (342)
T cd08266 235 GVDVVVEHVGA 245 (342)
T ss_pred CCcEEEECCcH
Confidence 69999999874
No 325
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.76 E-value=0.0004 Score=51.47 Aligned_cols=83 Identities=17% Similarity=0.370 Sum_probs=59.8
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc---------------------chhHHHHHHHHhcCCCCeeE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM---------------------AAGRDVKVAIVMQNPAAKVD 78 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~ 78 (138)
.+.+++++|.|+ ||+|..+++.|+..|. ++.+++.+. .+.+.+.+.+++..|..++.
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~ 99 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE 99 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence 467889999998 7999999999999998 899998863 34455556676666777788
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 79 VMELDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 79 ~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
.+..+++. +.+..+++ ..|++|.+..
T Consensus 100 ~~~~~~~~-~~~~~~~~-------~~DlVid~~D 125 (339)
T PRK07688 100 AIVQDVTA-EELEELVT-------GVDLIIDATD 125 (339)
T ss_pred EEeccCCH-HHHHHHHc-------CCCEEEEcCC
Confidence 88777753 33333322 3577776654
No 326
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.76 E-value=7.6e-05 Score=58.37 Aligned_cols=47 Identities=26% Similarity=0.404 Sum_probs=41.1
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAI 68 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l 68 (138)
++.+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++...+
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 577899999999 59999999999999999999999988777765544
No 327
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.75 E-value=0.00011 Score=53.02 Aligned_cols=76 Identities=18% Similarity=0.311 Sum_probs=55.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRG-VHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++.+|+++|+|+ ||+|+++++.|...| .+|.+++|+.++++++.+.+.... .+. .+. +. .+
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~---~~~---~~~----~~-------~~ 181 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG---KAE---LDL----EL-------QE 181 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc---cee---ecc----cc-------hh
Confidence 577899999997 899999999999999 589999999888877766653221 011 111 00 11
Q ss_pred cCCCccEEEECcccC
Q 042455 100 RALPLNILINKAGIC 114 (138)
Q Consensus 100 ~~~~id~lv~~ag~~ 114 (138)
.....|++||+....
T Consensus 182 ~~~~~DivInaTp~g 196 (278)
T PRK00258 182 ELADFDLIINATSAG 196 (278)
T ss_pred ccccCCEEEECCcCC
Confidence 224579999999865
No 328
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.75 E-value=4.1e-05 Score=52.59 Aligned_cols=48 Identities=25% Similarity=0.224 Sum_probs=40.9
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVA 67 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~ 67 (138)
..+++||+++|+|.+ .+|..+++.|.+.|++|++++++.++.++....
T Consensus 23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 457899999999995 899999999999999999999987766665443
No 329
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.75 E-value=0.00029 Score=51.71 Aligned_cols=80 Identities=15% Similarity=0.201 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.|.+++|+|+++++|..+++.....|++|+.+++++++.+.+.+.+ +... ..|..+.++....+.+.. . +
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~~---vi~~~~~~~~~~~i~~~~-~-~ 220 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFDD---AFNYKEEPDLDAALKRYF-P-N 220 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCce---eEEcCCcccHHHHHHHhC-C-C
Confidence 5789999999999999999877788999998888876655443323 2211 122222222333333322 1 3
Q ss_pred CccEEEECcc
Q 042455 103 PLNILINKAG 112 (138)
Q Consensus 103 ~id~lv~~ag 112 (138)
.+|+++.+.|
T Consensus 221 gvd~v~d~~g 230 (338)
T cd08295 221 GIDIYFDNVG 230 (338)
T ss_pred CcEEEEECCC
Confidence 6888888766
No 330
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=97.74 E-value=7.6e-05 Score=52.70 Aligned_cols=87 Identities=16% Similarity=0.111 Sum_probs=65.7
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHH-HHHHH---hcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDV-KVAIV---MQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~-~~~l~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
..|++||||-+|-=|..++..|+.+|+.|..+-|..+..... +..|- ..+.+.....+-.|++|...+.+++..+
T Consensus 27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i- 105 (376)
T KOG1372|consen 27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI- 105 (376)
T ss_pred cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-
Confidence 357999999999999999999999999998877755443322 22221 1122567888899999999999999887
Q ss_pred hcCCCccEEEECcccC
Q 042455 99 ARALPLNILINKAGIC 114 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~ 114 (138)
+++-+.|.|+-.
T Consensus 106 ----kPtEiYnLaAQS 117 (376)
T KOG1372|consen 106 ----KPTEVYNLAAQS 117 (376)
T ss_pred ----Cchhhhhhhhhc
Confidence 467777777654
No 331
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.72 E-value=0.00012 Score=53.48 Aligned_cols=76 Identities=22% Similarity=0.321 Sum_probs=60.7
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPL 104 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 104 (138)
..++|-||+|-.|.-+|++|+.+|.+.++.+||..+++.+...| +.+.-.+.+.+ +..++...+ +.
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~--p~~~~~~~~-------~~ 72 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLGV--PAALEAMAS-------RT 72 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCCC--HHHHHHHHh-------cc
Confidence 46789999999999999999999999999999999999888877 44444555554 444444444 46
Q ss_pred cEEEECcccC
Q 042455 105 NILINKAGIC 114 (138)
Q Consensus 105 d~lv~~ag~~ 114 (138)
++|+||+|..
T Consensus 73 ~VVlncvGPy 82 (382)
T COG3268 73 QVVLNCVGPY 82 (382)
T ss_pred eEEEeccccc
Confidence 9999999975
No 332
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.71 E-value=0.00068 Score=47.02 Aligned_cols=81 Identities=16% Similarity=0.301 Sum_probs=57.3
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc------------------chhHHHHHHHHhcCCCCeeEEEEe
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM------------------AAGRDVKVAIVMQNPAAKVDVMEL 82 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~ 82 (138)
+.+++++|.|+ ||+|..+++.|+..|. ++.+++.+. .+.+.+.+.+.+..|..++..+..
T Consensus 26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~ 104 (212)
T PRK08644 26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE 104 (212)
T ss_pred HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence 57788999997 7999999999999998 699988762 345556667777777777777666
Q ss_pred cCCCHHHHHHHHHHHHhcCCCccEEEECc
Q 042455 83 DLSSLASVRKFASDFTARALPLNILINKA 111 (138)
Q Consensus 83 D~~~~~~~~~~~~~~~~~~~~id~lv~~a 111 (138)
.+++ +.+.+++ ...|++|.+.
T Consensus 105 ~i~~-~~~~~~~-------~~~DvVI~a~ 125 (212)
T PRK08644 105 KIDE-DNIEELF-------KDCDIVVEAF 125 (212)
T ss_pred ecCH-HHHHHHH-------cCCCEEEECC
Confidence 6643 2332222 2467777664
No 333
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.71 E-value=0.00079 Score=50.51 Aligned_cols=77 Identities=14% Similarity=0.206 Sum_probs=54.2
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
+.++.++|+|+ |.+|+..++.+...|++|.+++++.++.+.+...+ +.. +..+..+.+.+.+.+.
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~~---v~~~~~~~~~l~~~l~------ 229 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GGR---IHTRYSNAYEIEDAVK------ 229 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Cce---eEeccCCHHHHHHHHc------
Confidence 46678999988 79999999999999999999999877655543322 221 2234455555544432
Q ss_pred CCccEEEECcccC
Q 042455 102 LPLNILINKAGIC 114 (138)
Q Consensus 102 ~~id~lv~~ag~~ 114 (138)
..|++|+++++.
T Consensus 230 -~aDvVI~a~~~~ 241 (370)
T TIGR00518 230 -RADLLIGAVLIP 241 (370)
T ss_pred -cCCEEEEccccC
Confidence 469999998663
No 334
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=97.70 E-value=0.00055 Score=49.07 Aligned_cols=80 Identities=16% Similarity=0.289 Sum_probs=53.4
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.+++++|+|+++++|+++++.+...|+++++++++.+..+.+ ..+ +.. ...+..+.+....+.+.. . ..
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~-~-~~ 207 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEEVKEAT-G-GR 207 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHHHHHHh-C-CC
Confidence 578999999999999999999999999999998876654443 222 221 123444333333333322 1 24
Q ss_pred CccEEEECccc
Q 042455 103 PLNILINKAGI 113 (138)
Q Consensus 103 ~id~lv~~ag~ 113 (138)
++|++++++|.
T Consensus 208 ~~d~vi~~~g~ 218 (323)
T cd05276 208 GVDVILDMVGG 218 (323)
T ss_pred CeEEEEECCch
Confidence 68999998773
No 335
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.70 E-value=7.4e-05 Score=55.02 Aligned_cols=79 Identities=14% Similarity=0.046 Sum_probs=47.9
Q ss_pred EEEEeCCCCchHHHHHHHHHHCC-------CEEEEEecCcch--hHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH
Q 042455 26 TAIVTGASSGIGAETTRVLALRG-------VHVIMADRNMAA--GRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASD 96 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g-------~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 96 (138)
+++|||++|.+|..++..|+..+ .+|+++++++.. ++....++... ......|+....+..
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-----~~~~~~~~~~~~~~~----- 73 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-----AFPLLKSVVATTDPE----- 73 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-----cccccCCceecCCHH-----
Confidence 58999999999999999999854 489999996532 22222222111 001112332222221
Q ss_pred HHhcCCCccEEEECcccCCC
Q 042455 97 FTARALPLNILINKAGICGT 116 (138)
Q Consensus 97 ~~~~~~~id~lv~~ag~~~~ 116 (138)
+.+...|++|+.||....
T Consensus 74 --~~l~~aDiVI~tAG~~~~ 91 (325)
T cd01336 74 --EAFKDVDVAILVGAMPRK 91 (325)
T ss_pred --HHhCCCCEEEEeCCcCCC
Confidence 222468999999998643
No 336
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.69 E-value=0.00057 Score=51.71 Aligned_cols=88 Identities=15% Similarity=0.290 Sum_probs=62.6
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
.++++|+++|+|+ |-+|.-+|++|..+|. +|+++.|..++++++..++ + .++...+++...+.
T Consensus 174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~-----~-------~~~~~l~el~~~l~--- 237 (414)
T COG0373 174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL-----G-------AEAVALEELLEALA--- 237 (414)
T ss_pred cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh-----C-------CeeecHHHHHHhhh---
Confidence 3488999999999 5799999999999996 8999999999999888776 2 22223344444433
Q ss_pred hcCCCccEEEECcccCCCCCccCHHHHHHHh
Q 042455 99 ARALPLNILINKAGICGTPFMLSKDNIELHF 129 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 129 (138)
..|++|.+.|.. ..-++.+.++..+
T Consensus 238 ----~~DvVissTsa~--~~ii~~~~ve~a~ 262 (414)
T COG0373 238 ----EADVVISSTSAP--HPIITREMVERAL 262 (414)
T ss_pred ----hCCEEEEecCCC--ccccCHHHHHHHH
Confidence 468888888753 3334445555443
No 337
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.68 E-value=0.00087 Score=50.01 Aligned_cols=83 Identities=22% Similarity=0.321 Sum_probs=63.1
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------chhHHHHHHHHhcCCCCeeEEE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM-------------------AAGRDVKVAIVMQNPAAKVDVM 80 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 80 (138)
.+.+++++|.|+ ||+|..+++.|+..|. ++.+++.+. .+.+.+.+.+++..|..++..+
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~ 103 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS 103 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence 367889999988 7999999999999998 799987753 4566777888888888888888
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 81 ELDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 81 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
...++. +....++. ..|++|.+..
T Consensus 104 ~~~i~~-~~~~~~~~-------~~DvVvd~~d 127 (355)
T PRK05597 104 VRRLTW-SNALDELR-------DADVILDGSD 127 (355)
T ss_pred EeecCH-HHHHHHHh-------CCCEEEECCC
Confidence 777753 33333332 4688888765
No 338
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.67 E-value=0.00038 Score=50.03 Aligned_cols=80 Identities=16% Similarity=0.253 Sum_probs=54.4
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.+++++|+|+++++|+++++.+...|++|+++++++++.+.+. .+ +.. ..+|..+.+..+.+.+.. ...
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~~~~~~~~~~~--~~~ 212 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA-----GAD---AVFNYRAEDLADRILAAT--AGQ 212 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCcCHHHHHHHHc--CCC
Confidence 5789999999999999999999999999999998876544432 22 221 123444444444443322 123
Q ss_pred CccEEEECccc
Q 042455 103 PLNILINKAGI 113 (138)
Q Consensus 103 ~id~lv~~ag~ 113 (138)
.+|.+++++|.
T Consensus 213 ~~d~vi~~~~~ 223 (325)
T cd08253 213 GVDVIIEVLAN 223 (325)
T ss_pred ceEEEEECCch
Confidence 69999998764
No 339
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.67 E-value=0.001 Score=43.10 Aligned_cols=78 Identities=18% Similarity=0.234 Sum_probs=57.3
Q ss_pred EEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEEEecCCC
Q 042455 27 AIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVMELDLSS 86 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 86 (138)
++|.|+ ||+|.++++.|+..|. ++.+++.+ ..+.+.+.+.+++..|..++..+..++.+
T Consensus 2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~ 80 (143)
T cd01483 2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE 80 (143)
T ss_pred EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence 678887 8999999999999998 78888654 23456667777777777888888777754
Q ss_pred HHHHHHHHHHHHhcCCCccEEEECccc
Q 042455 87 LASVRKFASDFTARALPLNILINKAGI 113 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~~~id~lv~~ag~ 113 (138)
... ...+.+.|++|.+..-
T Consensus 81 ~~~--------~~~~~~~diVi~~~d~ 99 (143)
T cd01483 81 DNL--------DDFLDGVDLVIDAIDN 99 (143)
T ss_pred hhH--------HHHhcCCCEEEECCCC
Confidence 322 1122468999988763
No 340
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.67 E-value=0.00049 Score=49.95 Aligned_cols=41 Identities=29% Similarity=0.408 Sum_probs=35.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|+|+++++|+++++.+...|++++++.+++++.+.
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~ 202 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI 202 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 47799999999999999999999999999998887655443
No 341
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.67 E-value=0.00039 Score=51.03 Aligned_cols=78 Identities=14% Similarity=0.200 Sum_probs=50.3
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALP 103 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 103 (138)
.+++|+|+++++|.+.++.....|+ +|+.+++++++.+.+..++ +.... .|..+ +++.+.+.+.. . ..
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~v---i~~~~-~~~~~~i~~~~-~-~g 224 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDAA---INYKT-DNVAERLRELC-P-EG 224 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcEE---EECCC-CCHHHHHHHHC-C-CC
Confidence 7999999999999999887777898 7999988876655444333 32211 22222 22223333322 2 36
Q ss_pred ccEEEECccc
Q 042455 104 LNILINKAGI 113 (138)
Q Consensus 104 id~lv~~ag~ 113 (138)
+|+++.++|.
T Consensus 225 vd~vid~~g~ 234 (345)
T cd08293 225 VDVYFDNVGG 234 (345)
T ss_pred ceEEEECCCc
Confidence 8999988763
No 342
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.66 E-value=0.00024 Score=49.63 Aligned_cols=80 Identities=21% Similarity=0.301 Sum_probs=58.5
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCC---EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGV---HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
+++++||++|=+|.+|.+.+..+|. ++++.+.. .+|+++..+.++++++.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-----------------------d~DLt~~a~t~~lF~~e---- 54 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-----------------------DADLTNLADTRALFESE---- 54 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-----------------------cccccchHHHHHHHhcc----
Confidence 6899999999999999999999875 45554431 57999999999999885
Q ss_pred CCccEEEECcccCCCC---CccCHHHHHHHhhhc
Q 042455 102 LPLNILINKAGICGTP---FMLSKDNIELHFATN 132 (138)
Q Consensus 102 ~~id~lv~~ag~~~~~---~~~~~~~~~~~~~~n 132 (138)
++..+|+.|+..+.. .....+-|..-+++|
T Consensus 55 -kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in 87 (315)
T KOG1431|consen 55 -KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN 87 (315)
T ss_pred -CCceeeehHhhhcchhhcCCCchHHHhhcceec
Confidence 578888888765422 134455555544443
No 343
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.65 E-value=0.0011 Score=44.56 Aligned_cols=77 Identities=18% Similarity=0.342 Sum_probs=54.6
Q ss_pred EEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc------------------chhHHHHHHHHhcCCCCeeEEEEecCCCH
Q 042455 27 AIVTGASSGIGAETTRVLALRGV-HVIMADRNM------------------AAGRDVKVAIVMQNPAAKVDVMELDLSSL 87 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 87 (138)
++|.|+ ||+|..+++.|+..|. ++.+++.+. .+.+.....+++..|..++..+...++.
T Consensus 2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~- 79 (174)
T cd01487 2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE- 79 (174)
T ss_pred EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh-
Confidence 678886 7999999999999998 699998864 3455566677777777777777666643
Q ss_pred HHHHHHHHHHHhcCCCccEEEECcc
Q 042455 88 ASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 88 ~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
+.+.+++ ...|++|.+..
T Consensus 80 ~~~~~~l-------~~~DlVi~~~d 97 (174)
T cd01487 80 NNLEGLF-------GDCDIVVEAFD 97 (174)
T ss_pred hhHHHHh-------cCCCEEEECCC
Confidence 3333332 24688877743
No 344
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.64 E-value=0.00034 Score=45.43 Aligned_cols=76 Identities=17% Similarity=0.301 Sum_probs=54.4
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCC--EEEEEecCcchhHHHHHHHHhcCC--CCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 26 TAIVTGASSGIGAETTRVLALRGV--HVIMADRNMAAGRDVKVAIVMQNP--AAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
++.|+|++|.+|..++..|...+. ++++++++++.++....++..... .........| ++ .+
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~---~~-----------~~ 67 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD---YE-----------AL 67 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS---GG-----------GG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc---cc-----------cc
Confidence 578999999999999999999874 799999998887777666654321 1223332322 22 23
Q ss_pred CCccEEEECcccCC
Q 042455 102 LPLNILINKAGICG 115 (138)
Q Consensus 102 ~~id~lv~~ag~~~ 115 (138)
..-|++|..+|...
T Consensus 68 ~~aDivvitag~~~ 81 (141)
T PF00056_consen 68 KDADIVVITAGVPR 81 (141)
T ss_dssp TTESEEEETTSTSS
T ss_pred ccccEEEEeccccc
Confidence 45799999999864
No 345
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.64 E-value=0.00045 Score=50.39 Aligned_cols=79 Identities=15% Similarity=0.249 Sum_probs=51.0
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.+.+++|+|+++++|...++.....|++|+.+++++++.+.+ .++ +.... .|..+.+...+.+..... +
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l-----Ga~~v---i~~~~~~~~~~~~~~~~~--~ 206 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL-----GFDVA---FNYKTVKSLEETLKKASP--D 206 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCCEE---EeccccccHHHHHHHhCC--C
Confidence 578999999999999999887777899999888877664443 222 33211 222222233333333321 3
Q ss_pred CccEEEECcc
Q 042455 103 PLNILINKAG 112 (138)
Q Consensus 103 ~id~lv~~ag 112 (138)
.+|+++.+.|
T Consensus 207 gvdvv~d~~G 216 (325)
T TIGR02825 207 GYDCYFDNVG 216 (325)
T ss_pred CeEEEEECCC
Confidence 5888888876
No 346
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=97.64 E-value=0.00034 Score=50.80 Aligned_cols=109 Identities=17% Similarity=0.154 Sum_probs=78.7
Q ss_pred CCEEEEeCC-CCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 24 GVTAIVTGA-SSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 24 ~k~~litG~-~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
..+++|.|. ..-|++.+|.-|-++|+-|+++..+.+..+....+ . ...+.....|..++.++...+.+....+.
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e----~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~ 77 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESE----D-RPDIRPLWLDDSDPSSIHASLSRFASLLS 77 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhc----c-CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence 457889996 68999999999999999999999887664443222 1 24477888888777777777776665433
Q ss_pred --------------CccEEEECcccC---CCCCccCHHHHHHHhhhcccccc
Q 042455 103 --------------PLNILINKAGIC---GTPFMLSKDNIELHFATNHLGAF 137 (138)
Q Consensus 103 --------------~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~g~~ 137 (138)
.+..+|..-... +|...++.+.|.+.++.|+..++
T Consensus 78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~ 129 (299)
T PF08643_consen 78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPI 129 (299)
T ss_pred CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHH
Confidence 345555554443 35568899999999999876543
No 347
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.63 E-value=0.00043 Score=53.54 Aligned_cols=47 Identities=19% Similarity=0.295 Sum_probs=39.6
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVA 67 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~ 67 (138)
.++++|+++|+|+ ||+|+++++.|.+.|++|.+++|+.++.++....
T Consensus 328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~ 374 (477)
T PRK09310 328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR 374 (477)
T ss_pred CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 3567899999996 7999999999999999999999988776665443
No 348
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.63 E-value=0.0005 Score=50.92 Aligned_cols=80 Identities=14% Similarity=0.200 Sum_probs=50.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.+.+++|.|+++++|...++.....|++|+.+++++++.+.+..++ +... ..|..+.+.+...+.+... +
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~~---vi~~~~~~~~~~~i~~~~~--~ 227 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFDE---AFNYKEEPDLDAALKRYFP--E 227 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCCE---EEECCCcccHHHHHHHHCC--C
Confidence 5789999999999999999877788999988888776654433222 3221 1122222223333333221 3
Q ss_pred CccEEEECcc
Q 042455 103 PLNILINKAG 112 (138)
Q Consensus 103 ~id~lv~~ag 112 (138)
.+|+++.++|
T Consensus 228 gvD~v~d~vG 237 (348)
T PLN03154 228 GIDIYFDNVG 237 (348)
T ss_pred CcEEEEECCC
Confidence 5888888776
No 349
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.62 E-value=0.00074 Score=47.24 Aligned_cols=75 Identities=17% Similarity=0.237 Sum_probs=57.4
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
.++|.|+ |-+|..+|+.|.++|.+|++++++++...+.... ......+.+|-++++.++++ .....|
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~a------gi~~aD 68 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEA------GIDDAD 68 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhc------CCCcCC
Confidence 4667776 6999999999999999999999998887663331 13467888999998887665 123568
Q ss_pred EEEECccc
Q 042455 106 ILINKAGI 113 (138)
Q Consensus 106 ~lv~~ag~ 113 (138)
++|...|-
T Consensus 69 ~vva~t~~ 76 (225)
T COG0569 69 AVVAATGN 76 (225)
T ss_pred EEEEeeCC
Confidence 88877774
No 350
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.60 E-value=0.00063 Score=50.15 Aligned_cols=77 Identities=16% Similarity=0.273 Sum_probs=48.7
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC-C
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA-L 102 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 102 (138)
+.++||+||+||+|...++.....|+.++++..+.++.+ ...++ +... ..|..+.+ +.+++++.. +
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd~---vi~y~~~~----~~~~v~~~t~g 209 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GADH---VINYREED----FVEQVRELTGG 209 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCCE---EEcCCccc----HHHHHHHHcCC
Confidence 899999999999999999988888976666655554444 33332 3221 11233333 333333322 2
Q ss_pred -CccEEEECccc
Q 042455 103 -PLNILINKAGI 113 (138)
Q Consensus 103 -~id~lv~~ag~ 113 (138)
.+|+++...|.
T Consensus 210 ~gvDvv~D~vG~ 221 (326)
T COG0604 210 KGVDVVLDTVGG 221 (326)
T ss_pred CCceEEEECCCH
Confidence 58999998884
No 351
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.60 E-value=0.0011 Score=46.82 Aligned_cols=83 Identities=18% Similarity=0.326 Sum_probs=58.4
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------chhHHHHHHHHhcCCCCeeEEE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM-------------------AAGRDVKVAIVMQNPAAKVDVM 80 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 80 (138)
.+.+++++|.|+ ||+|..+++.|+..|. ++.+++.+. .+++.+.+.+++..|..++..+
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~ 99 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI 99 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 367788999988 6999999999999997 788887642 3455566777777777777777
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 81 ELDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 81 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
...++ .+.+.++++ ..|++|.+..
T Consensus 100 ~~~i~-~~~~~~~~~-------~~DlVvd~~D 123 (240)
T TIGR02355 100 NAKLD-DAELAALIA-------EHDIVVDCTD 123 (240)
T ss_pred eccCC-HHHHHHHhh-------cCCEEEEcCC
Confidence 65554 233333332 3577776664
No 352
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=97.57 E-value=0.0014 Score=49.26 Aligned_cols=82 Identities=16% Similarity=0.307 Sum_probs=59.6
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVME 81 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 81 (138)
+.+.+++|.|+ ||+|..+++.|+..|. ++.+++.+ ..+++.+...+.+..|..++..+.
T Consensus 39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 117 (370)
T PRK05600 39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence 56788999988 6999999999999997 89998875 235566677777777777788877
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 82 LDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 82 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
..++ .+.+..++. ..|++|.+.-
T Consensus 118 ~~i~-~~~~~~~~~-------~~DlVid~~D 140 (370)
T PRK05600 118 ERLT-AENAVELLN-------GVDLVLDGSD 140 (370)
T ss_pred eecC-HHHHHHHHh-------CCCEEEECCC
Confidence 7775 333333332 3577776654
No 353
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.53 E-value=0.0023 Score=47.00 Aligned_cols=80 Identities=11% Similarity=0.233 Sum_probs=57.2
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEecCcchhHHHHHHHHhcCCC-CeeEEEEecCCCHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV--HVIMADRNMAAGRDVKVAIVMQNPA-AKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
.-.++++.|+|+ |.+|..++..|+..|. .+++++++++.++....++....+- .++... . .+.+.
T Consensus 3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~-------- 70 (315)
T PRK00066 3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD-------- 70 (315)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH--------
Confidence 345678999998 9999999999999886 7999999999888888777654321 122222 1 22221
Q ss_pred HhcCCCccEEEECcccCC
Q 042455 98 TARALPLNILINKAGICG 115 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~~ 115 (138)
+..-|++|..+|...
T Consensus 71 ---~~~adivIitag~~~ 85 (315)
T PRK00066 71 ---CKDADLVVITAGAPQ 85 (315)
T ss_pred ---hCCCCEEEEecCCCC
Confidence 235799999999854
No 354
>PRK08223 hypothetical protein; Validated
Probab=97.51 E-value=0.00096 Score=48.25 Aligned_cols=82 Identities=13% Similarity=0.241 Sum_probs=59.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVM 80 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 80 (138)
.+.+.+++|.|+ ||+|..+++.|+..|. ++.+++.+ ..+.+.+.+.+++..|..++..+
T Consensus 24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~ 102 (287)
T PRK08223 24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF 102 (287)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 367889999988 6999999999999998 78888764 23556667777777888888888
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCccEEEECc
Q 042455 81 ELDLSSLASVRKFASDFTARALPLNILINKA 111 (138)
Q Consensus 81 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 111 (138)
...++. +.+..+++ ..|++|.+.
T Consensus 103 ~~~l~~-~n~~~ll~-------~~DlVvD~~ 125 (287)
T PRK08223 103 PEGIGK-ENADAFLD-------GVDVYVDGL 125 (287)
T ss_pred ecccCc-cCHHHHHh-------CCCEEEECC
Confidence 777753 23333332 357776443
No 355
>PTZ00325 malate dehydrogenase; Provisional
Probab=97.50 E-value=0.00024 Score=52.27 Aligned_cols=81 Identities=15% Similarity=0.095 Sum_probs=51.1
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRG--VHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++.+++.|+|++|.+|..++..|+..+ ..+++++++ .++....++....+ . ....+.+|+.+....+
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~--~--~~v~~~td~~~~~~~l----- 74 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDT--P--AKVTGYADGELWEKAL----- 74 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCc--C--ceEEEecCCCchHHHh-----
Confidence 345689999999999999999999665 479999993 22222334433221 1 2233444433322222
Q ss_pred cCCCccEEEECcccCC
Q 042455 100 RALPLNILINKAGICG 115 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~ 115 (138)
...|++|+++|...
T Consensus 75 --~gaDvVVitaG~~~ 88 (321)
T PTZ00325 75 --RGADLVLICAGVPR 88 (321)
T ss_pred --CCCCEEEECCCCCC
Confidence 35799999999753
No 356
>PLN00106 malate dehydrogenase
Probab=97.50 E-value=0.00022 Score=52.46 Aligned_cols=81 Identities=16% Similarity=0.184 Sum_probs=51.7
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV--HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
..+++.|+|++|.+|..++..|+..+. .+++++.++ ++....+|....+ .. ...++++.++....
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~--~~--~i~~~~~~~d~~~~------- 83 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINT--PA--QVRGFLGDDQLGDA------- 83 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCc--Cc--eEEEEeCCCCHHHH-------
Confidence 456899999999999999999997764 799999987 2222234432221 11 12233222222222
Q ss_pred CCCccEEEECcccCCC
Q 042455 101 ALPLNILINKAGICGT 116 (138)
Q Consensus 101 ~~~id~lv~~ag~~~~ 116 (138)
+...|++|+.||....
T Consensus 84 l~~aDiVVitAG~~~~ 99 (323)
T PLN00106 84 LKGADLVIIPAGVPRK 99 (323)
T ss_pred cCCCCEEEEeCCCCCC
Confidence 2358999999998543
No 357
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.50 E-value=0.0018 Score=45.57 Aligned_cols=83 Identities=19% Similarity=0.245 Sum_probs=60.6
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------chhHHHHHHHHhcCCCCeeEEEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM-------------------AAGRDVKVAIVMQNPAAKVDVME 81 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 81 (138)
+.+.+++|.|. ||+|..+++.|+..|. ++.+++.+. .+.+.+.+.+....|..++..+.
T Consensus 9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~ 87 (231)
T cd00755 9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE 87 (231)
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence 56778999988 6999999999999997 899987642 34566677777778878888777
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 82 LDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 82 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
..++ ++....++. ..+|++|.+..
T Consensus 88 ~~i~-~~~~~~l~~------~~~D~VvdaiD 111 (231)
T cd00755 88 EFLT-PDNSEDLLG------GDPDFVVDAID 111 (231)
T ss_pred eecC-HhHHHHHhc------CCCCEEEEcCC
Confidence 6665 334433332 24788888765
No 358
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=97.50 E-value=0.0019 Score=45.47 Aligned_cols=79 Identities=23% Similarity=0.314 Sum_probs=55.4
Q ss_pred EEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------chhHHHHHHHHhcCCCCeeEEEEecCCC
Q 042455 27 AIVTGASSGIGAETTRVLALRGV-HVIMADRNM-------------------AAGRDVKVAIVMQNPAAKVDVMELDLSS 86 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 86 (138)
++|.|+ ||+|.++++.|+..|. ++.+++.+. .+++.+.+.+++..|..++..+..++.+
T Consensus 2 VlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~ 80 (234)
T cd01484 2 VLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP 80 (234)
T ss_pred EEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence 677775 7999999999999998 788887741 3455556667777778888888888865
Q ss_pred HHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 87 LASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
...... . .+..+|++|.+..
T Consensus 81 ~~~~~~---~---f~~~~DvVi~a~D 100 (234)
T cd01484 81 EQDFND---T---FFEQFHIIVNALD 100 (234)
T ss_pred hhhchH---H---HHhCCCEEEECCC
Confidence 332211 1 1235788887754
No 359
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.48 E-value=0.001 Score=48.28 Aligned_cols=84 Identities=20% Similarity=0.248 Sum_probs=53.5
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcc---hhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMA---AGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFAS 95 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 95 (138)
.++++|+++|.|+ ||-+++++..|+..|+ +|.++.|+.+ +++++.+.+.... ...+... +. ++... +.
T Consensus 120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~-~~~~~~~--~~---~~~~~-l~ 191 (288)
T PRK12749 120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVT--DL---ADQQA-FA 191 (288)
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhcc-CceEEEe--ch---hhhhh-hh
Confidence 3568899999998 5669999999999997 8999999854 6666665553322 1112221 11 11111 11
Q ss_pred HHHhcCCCccEEEECcccC
Q 042455 96 DFTARALPLNILINKAGIC 114 (138)
Q Consensus 96 ~~~~~~~~id~lv~~ag~~ 114 (138)
+...+.|++||+..+.
T Consensus 192 ---~~~~~aDivINaTp~G 207 (288)
T PRK12749 192 ---EALASADILTNGTKVG 207 (288)
T ss_pred ---hhcccCCEEEECCCCC
Confidence 1224679999988664
No 360
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=97.48 E-value=0.0013 Score=48.23 Aligned_cols=78 Identities=23% Similarity=0.368 Sum_probs=55.2
Q ss_pred EEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEEEecCCC
Q 042455 27 AIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVMELDLSS 86 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 86 (138)
++|+|+ ||+|.++++.|+..|. ++.+++.+ ..+++.+.+.+++..|..++..+..++++
T Consensus 2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~ 80 (312)
T cd01489 2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD 80 (312)
T ss_pred EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence 688887 7999999999999998 78888763 13455566777777777888888888876
Q ss_pred HHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 87 LASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
......++ ...|++|++.-
T Consensus 81 ~~~~~~f~-------~~~DvVv~a~D 99 (312)
T cd01489 81 PDFNVEFF-------KQFDLVFNALD 99 (312)
T ss_pred ccchHHHH-------hcCCEEEECCC
Confidence 32222222 24677777654
No 361
>PRK08328 hypothetical protein; Provisional
Probab=97.48 E-value=0.0021 Score=45.12 Aligned_cols=82 Identities=17% Similarity=0.276 Sum_probs=54.9
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcc--------------------hhHHHHHHHHhcCCCCeeEEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMA--------------------AGRDVKVAIVMQNPAAKVDVM 80 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~--------------------~~~~~~~~l~~~~~~~~~~~~ 80 (138)
+.+++++|.|+ ||+|.++++.|+..|. ++.+++.+.- +.+.....++...|...+..+
T Consensus 25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~ 103 (231)
T PRK08328 25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF 103 (231)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 56788999988 6999999999999997 7888876421 122223445555666777776
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 81 ELDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 81 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
...++ .+.+..+++ ..|++|.+..
T Consensus 104 ~~~~~-~~~~~~~l~-------~~D~Vid~~d 127 (231)
T PRK08328 104 VGRLS-EENIDEVLK-------GVDVIVDCLD 127 (231)
T ss_pred eccCC-HHHHHHHHh-------cCCEEEECCC
Confidence 66653 334443332 4588877765
No 362
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.47 E-value=0.0021 Score=44.22 Aligned_cols=63 Identities=21% Similarity=0.357 Sum_probs=45.2
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC---c---------------chhHHHHHHHHhcCCCCeeEEEE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN---M---------------AAGRDVKVAIVMQNPAAKVDVME 81 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~---~---------------~~~~~~~~~l~~~~~~~~~~~~~ 81 (138)
.+..++++|.|+ ||+|..+++.|+..|. ++.+++.+ . .+.+...+.+....|..++..+.
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~ 96 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD 96 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence 367788999998 6999999999999998 79999876 1 12333445555556656666554
Q ss_pred ecC
Q 042455 82 LDL 84 (138)
Q Consensus 82 ~D~ 84 (138)
.++
T Consensus 97 ~~i 99 (200)
T TIGR02354 97 EKI 99 (200)
T ss_pred eeC
Confidence 444
No 363
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=97.45 E-value=0.0018 Score=44.35 Aligned_cols=81 Identities=21% Similarity=0.331 Sum_probs=58.5
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVME 81 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 81 (138)
+.+++++|.|+ +|+|.++++.|+..|. ++.+++.+ ..+.+.+.+.+++..|..++..+.
T Consensus 19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~ 97 (197)
T cd01492 19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT 97 (197)
T ss_pred HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence 56788999986 5799999999999998 68888753 134556677788888888888777
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 82 LDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 82 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
..+++ ....++ ..+|++|.+..
T Consensus 98 ~~~~~--~~~~~~-------~~~dvVi~~~~ 119 (197)
T cd01492 98 DDISE--KPEEFF-------SQFDVVVATEL 119 (197)
T ss_pred cCccc--cHHHHH-------hCCCEEEECCC
Confidence 66652 122222 35799887754
No 364
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=97.44 E-value=0.0024 Score=45.82 Aligned_cols=85 Identities=21% Similarity=0.279 Sum_probs=58.9
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------chhHHHHHHHHhcCCCCeeEEE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM-------------------AAGRDVKVAIVMQNPAAKVDVM 80 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 80 (138)
.+.+.+++|.|+ ||+|..+++.|+..|. ++.+++.+. .+.+.+.+.+...+|..++..+
T Consensus 27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i 105 (268)
T PRK15116 27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV 105 (268)
T ss_pred HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence 367888999987 6999999999999995 898887641 2334556666677777777776
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCccEEEECccc
Q 042455 81 ELDLSSLASVRKFASDFTARALPLNILINKAGI 113 (138)
Q Consensus 81 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 113 (138)
..-+ +++....++. ...|++|.+...
T Consensus 106 ~~~i-~~e~~~~ll~------~~~D~VIdaiD~ 131 (268)
T PRK15116 106 DDFI-TPDNVAEYMS------AGFSYVIDAIDS 131 (268)
T ss_pred eccc-ChhhHHHHhc------CCCCEEEEcCCC
Confidence 4323 3455444432 257888888764
No 365
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.42 E-value=0.0013 Score=48.85 Aligned_cols=80 Identities=14% Similarity=0.208 Sum_probs=51.2
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
-+|+.+||.||++|+|.+.++-....|+..+++.++.+..+ +.+.+ +.. ...|..+++-++.+.+.. .
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l-----GAd---~vvdy~~~~~~e~~kk~~---~ 223 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL-----GAD---EVVDYKDENVVELIKKYT---G 223 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc-----CCc---EeecCCCHHHHHHHHhhc---C
Confidence 35789999999999999999988888854444444444432 23333 221 244665633333332221 5
Q ss_pred CCccEEEECccc
Q 042455 102 LPLNILINKAGI 113 (138)
Q Consensus 102 ~~id~lv~~ag~ 113 (138)
+++|+++-|+|-
T Consensus 224 ~~~DvVlD~vg~ 235 (347)
T KOG1198|consen 224 KGVDVVLDCVGG 235 (347)
T ss_pred CCccEEEECCCC
Confidence 689999999996
No 366
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.42 E-value=0.0031 Score=46.05 Aligned_cols=75 Identities=15% Similarity=0.222 Sum_probs=53.0
Q ss_pred EEEEeCCCCchHHHHHHHHHHCC--CEEEEEecCcchhHHHHHHHHhcCC--CCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 26 TAIVTGASSGIGAETTRVLALRG--VHVIMADRNMAAGRDVKVAIVMQNP--AAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
++.|.|+ |++|..++..|+..| .+|+++++++++++....++..... ....... . .+.+. .
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------l 66 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------C 66 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------h
Confidence 5788896 899999999999998 4899999999988887777754321 1112221 1 22221 1
Q ss_pred CCccEEEECcccCC
Q 042455 102 LPLNILINKAGICG 115 (138)
Q Consensus 102 ~~id~lv~~ag~~~ 115 (138)
..-|++|+++|...
T Consensus 67 ~~aDIVIitag~~~ 80 (306)
T cd05291 67 KDADIVVITAGAPQ 80 (306)
T ss_pred CCCCEEEEccCCCC
Confidence 35799999999864
No 367
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.40 E-value=0.00084 Score=48.67 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=37.0
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGR 62 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~ 62 (138)
.++.+++++|+|. |++|+++++.|...|++|.++.|+.++..
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~ 188 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA 188 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4678999999999 67999999999999999999999876543
No 368
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.39 E-value=0.0024 Score=48.34 Aligned_cols=46 Identities=24% Similarity=0.333 Sum_probs=41.0
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKV 66 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~ 66 (138)
+++..+++|+||+|.+|+-+++.|.+.|+.|.++-|+.++.+.+..
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 4567899999999999999999999999999999999888777654
No 369
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.38 E-value=0.0012 Score=50.30 Aligned_cols=47 Identities=26% Similarity=0.487 Sum_probs=39.7
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAI 68 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l 68 (138)
++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.+++..+...+
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~ 226 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF 226 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 478899999987 8999999999999997 8999999987776655443
No 370
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.38 E-value=0.0038 Score=42.83 Aligned_cols=83 Identities=19% Similarity=0.359 Sum_probs=58.4
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc---------------------chhHHHHHHHHhcCCCCeeEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM---------------------AAGRDVKVAIVMQNPAAKVDV 79 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~ 79 (138)
+++.+++|.|++ |+|.++++.|+..|. ++.+++.+. .+.+...+.+++..|..++..
T Consensus 17 L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~ 95 (198)
T cd01485 17 LRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI 95 (198)
T ss_pred HhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence 567889999885 699999999999998 688887541 134445666777788888888
Q ss_pred EEecCCC-HHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 80 MELDLSS-LASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 80 ~~~D~~~-~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
+..++.+ .+....++ ...|++|.+..
T Consensus 96 ~~~~~~~~~~~~~~~~-------~~~dvVi~~~d 122 (198)
T cd01485 96 VEEDSLSNDSNIEEYL-------QKFTLVIATEE 122 (198)
T ss_pred EecccccchhhHHHHH-------hCCCEEEECCC
Confidence 7776653 23333332 25688887754
No 371
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.38 E-value=0.0021 Score=48.96 Aligned_cols=46 Identities=22% Similarity=0.410 Sum_probs=39.2
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEecCcchhHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRG-VHVIMADRNMAAGRDVKVA 67 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~ 67 (138)
.+.+++++|.|+ |.+|..+++.|...| .+|++++|+.+++.+....
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~ 223 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE 223 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 578899999997 899999999999999 5899999998776655543
No 372
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.36 E-value=0.0014 Score=46.83 Aligned_cols=74 Identities=11% Similarity=0.215 Sum_probs=54.0
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLN 105 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 105 (138)
.++|+|||+- |..+++.|.+.|++|+++.+.+...+.... .....+..+..+.+++..++.+ .++|
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~~~l~~~l~~-----~~i~ 67 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDPQELREFLKR-----HSID 67 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCHHHHHHHHHh-----cCCC
Confidence 5899999987 999999999999999998887765332211 1122344566677777777765 3799
Q ss_pred EEEECccc
Q 042455 106 ILINKAGI 113 (138)
Q Consensus 106 ~lv~~ag~ 113 (138)
++|..+..
T Consensus 68 ~VIDAtHP 75 (256)
T TIGR00715 68 ILVDATHP 75 (256)
T ss_pred EEEEcCCH
Confidence 99998864
No 373
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=97.35 E-value=0.0028 Score=46.10 Aligned_cols=41 Identities=22% Similarity=0.297 Sum_probs=35.2
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|.|+++++|.++++.+.+.|++|+.+.++.++.+.
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~ 185 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRW 185 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 57899999999999999999888899999998887765443
No 374
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=97.35 E-value=0.0024 Score=44.81 Aligned_cols=79 Identities=19% Similarity=0.232 Sum_probs=51.9
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
..+.+++|+|+++ +|+++++.+...|.+|+++++++++.+.+ ..+ +... ..|..+.+....+. ....
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~~~---~~~~ 199 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL-----GADH---VIDYKEEDLEEELR---LTGG 199 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh-----CCce---eccCCcCCHHHHHH---HhcC
Confidence 3578999999988 99999998888899999998886554432 222 2111 12333333333333 2233
Q ss_pred CCccEEEECccc
Q 042455 102 LPLNILINKAGI 113 (138)
Q Consensus 102 ~~id~lv~~ag~ 113 (138)
+.+|++++++|.
T Consensus 200 ~~~d~vi~~~~~ 211 (271)
T cd05188 200 GGADVVIDAVGG 211 (271)
T ss_pred CCCCEEEECCCC
Confidence 579999999875
No 375
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.32 E-value=0.0015 Score=47.25 Aligned_cols=39 Identities=26% Similarity=0.349 Sum_probs=34.9
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecC
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRN 57 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~ 57 (138)
..+++||.++|.|+++-.|+.++..|++.|+.|.++.|.
T Consensus 154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~ 192 (283)
T PRK14192 154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR 192 (283)
T ss_pred CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 346899999999998779999999999999999988874
No 376
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.32 E-value=0.0016 Score=47.70 Aligned_cols=46 Identities=24% Similarity=0.467 Sum_probs=38.5
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHH
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAI 68 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l 68 (138)
+.+++++|.|+ |.+|..+++.|...|. +|.+++|+.++..++..++
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~ 222 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL 222 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence 67899999988 8999999999998775 7999999988776655543
No 377
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.31 E-value=0.0028 Score=42.64 Aligned_cols=66 Identities=24% Similarity=0.283 Sum_probs=45.4
Q ss_pred ccCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHH---------HHHHHhcCCCCeeEEEEecCCC
Q 042455 17 TQGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDV---------KVAIVMQNPAAKVDVMELDLSS 86 (138)
Q Consensus 17 ~~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~---------~~~l~~~~~~~~~~~~~~D~~~ 86 (138)
....++.|+++.|.|. |.||+++|+.+..-|++|+..+|........ ..++.. ...+..+.+..++
T Consensus 29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~---~aDiv~~~~plt~ 103 (178)
T PF02826_consen 29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLA---QADIVSLHLPLTP 103 (178)
T ss_dssp TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHH---H-SEEEE-SSSST
T ss_pred CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcc---hhhhhhhhhcccc
Confidence 3455789999999988 7999999999999999999999987654311 122222 3556677777654
No 378
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=97.31 E-value=0.0022 Score=51.04 Aligned_cols=62 Identities=19% Similarity=0.311 Sum_probs=48.8
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC----------------------cchhHHHHHHHHhcCCCCeeE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN----------------------MAAGRDVKVAIVMQNPAAKVD 78 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~~ 78 (138)
+.+.+++|.|+ ||||..+++.|+..|. ++.+++.+ ..+++.+.+.+++.+|..++.
T Consensus 336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~ 414 (664)
T TIGR01381 336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT 414 (664)
T ss_pred HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence 46788999988 6999999999999998 79888752 224555677788888888888
Q ss_pred EEEecC
Q 042455 79 VMELDL 84 (138)
Q Consensus 79 ~~~~D~ 84 (138)
.+...+
T Consensus 415 ~~~~~I 420 (664)
T TIGR01381 415 GHRLTV 420 (664)
T ss_pred Eeeeee
Confidence 877664
No 379
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=97.31 E-value=0.0017 Score=47.25 Aligned_cols=41 Identities=24% Similarity=0.339 Sum_probs=35.1
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|.|+++++|.+.++.....|++|+.+++++++.+.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~ 183 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAW 183 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 57899999999999999988888889999988887766444
No 380
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.28 E-value=0.0012 Score=44.15 Aligned_cols=43 Identities=26% Similarity=0.335 Sum_probs=37.0
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGR 62 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~ 62 (138)
.++.+|+++|+|++.-+|..+++.|.++|++|.++.|+.+.+.
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~ 82 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK 82 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence 4689999999999766899999999999999999999864433
No 381
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=97.28 E-value=0.0035 Score=45.04 Aligned_cols=79 Identities=19% Similarity=0.337 Sum_probs=50.9
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.+++++|+|+++++|.++++.+...|++|+++.++++..+.+ ..+ +... ..+....+....+... .. ..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~~~~~-~~-~~ 207 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-----GADI---AINYREEDFVEVVKAE-TG-GK 207 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCcE---EEecCchhHHHHHHHH-cC-CC
Confidence 578999999999999999998889999999998876654432 221 2211 1233333333333222 11 13
Q ss_pred CccEEEECcc
Q 042455 103 PLNILINKAG 112 (138)
Q Consensus 103 ~id~lv~~ag 112 (138)
.+|++++++|
T Consensus 208 ~~d~~i~~~~ 217 (325)
T TIGR02824 208 GVDVILDIVG 217 (325)
T ss_pred CeEEEEECCc
Confidence 5899999876
No 382
>PRK07411 hypothetical protein; Validated
Probab=97.27 E-value=0.0033 Score=47.55 Aligned_cols=82 Identities=22% Similarity=0.364 Sum_probs=61.7
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVME 81 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 81 (138)
+...+++|.|+ ||+|..+++.|+..|. ++.+++.+ ..+.+...+.+++..|..++..+.
T Consensus 36 L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 36 LKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 56788999988 6999999999999998 79888763 235566677888888888888888
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 82 LDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 82 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
..++. +....++. ..|++|.+..
T Consensus 115 ~~~~~-~~~~~~~~-------~~D~Vvd~~d 137 (390)
T PRK07411 115 TRLSS-ENALDILA-------PYDVVVDGTD 137 (390)
T ss_pred cccCH-HhHHHHHh-------CCCEEEECCC
Confidence 77764 33333332 4688888765
No 383
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.26 E-value=0.0065 Score=47.44 Aligned_cols=85 Identities=22% Similarity=0.235 Sum_probs=55.6
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCH-------------H
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSL-------------A 88 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-------------~ 88 (138)
..+.+++|+|+ |.+|+..++.+...|++|+++++++++.+.... + +.+.. ..|..+. +
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~~v--~i~~~e~~~~~~gya~~~s~~ 233 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAEFL--ELDFEEEGGSGDGYAKVMSEE 233 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCeEE--Eeccccccccccchhhhcchh
Confidence 46889999998 699999999999999999999998877654332 2 44422 2232221 1
Q ss_pred HHHHHHHHHHhcCCCccEEEECcccCC
Q 042455 89 SVRKFASDFTARALPLNILINKAGICG 115 (138)
Q Consensus 89 ~~~~~~~~~~~~~~~id~lv~~ag~~~ 115 (138)
..++..+.+.+.....|++|.++|..+
T Consensus 234 ~~~~~~~~~~~~~~gaDVVIetag~pg 260 (509)
T PRK09424 234 FIKAEMALFAEQAKEVDIIITTALIPG 260 (509)
T ss_pred HHHHHHHHHHhccCCCCEEEECCCCCc
Confidence 122222222233356999999999743
No 384
>PLN00203 glutamyl-tRNA reductase
Probab=97.26 E-value=0.0029 Score=49.52 Aligned_cols=89 Identities=15% Similarity=0.267 Sum_probs=59.6
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
++.+++++|.|+ |.+|..+++.|...|+ +|+++.|+.++++.+...+ ++..+.+ ...++....+
T Consensus 263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~----~g~~i~~-----~~~~dl~~al----- 327 (519)
T PLN00203 263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF----PDVEIIY-----KPLDEMLACA----- 327 (519)
T ss_pred CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh----CCCceEe-----ecHhhHHHHH-----
Confidence 377999999999 8999999999999997 7999999988877765543 1222211 1222332222
Q ss_pred cCCCccEEEECcccCCCCCccCHHHHHHH
Q 042455 100 RALPLNILINKAGICGTPFMLSKDNIELH 128 (138)
Q Consensus 100 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~ 128 (138)
...|++|.+.+...| ..+.+.+...
T Consensus 328 --~~aDVVIsAT~s~~p--vI~~e~l~~~ 352 (519)
T PLN00203 328 --AEADVVFTSTSSETP--LFLKEHVEAL 352 (519)
T ss_pred --hcCCEEEEccCCCCC--eeCHHHHHHh
Confidence 246999998876444 2344444443
No 385
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.25 E-value=0.0057 Score=44.91 Aligned_cols=105 Identities=10% Similarity=0.076 Sum_probs=64.8
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhH---HH--HHHHHhcCCCCeeEEEEecCCCHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGR---DV--KVAIVMQNPAAKVDVMELDLSSLASVRKFA 94 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~---~~--~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~ 94 (138)
..+.+|++.|.|. |.||+++|+.|...|++|+..++..+... .. ...+.+.....++..+.+..+. +.+.++
T Consensus 132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~--~T~~li 208 (312)
T PRK15469 132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTP--ETVGII 208 (312)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCH--HHHHHh
Confidence 4578999999987 69999999999999999999887654311 00 1122222235667777777653 344454
Q ss_pred H-HHHhcCCCccEEEECcccCCCCCccCHHHHHHHhhh
Q 042455 95 S-DFTARALPLNILINKAGICGTPFMLSKDNIELHFAT 131 (138)
Q Consensus 95 ~-~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~ 131 (138)
. +..+.+ +.+.++.|.|... -++.+.+.+.++.
T Consensus 209 ~~~~l~~m-k~ga~lIN~aRG~---vVde~aL~~aL~~ 242 (312)
T PRK15469 209 NQQLLEQL-PDGAYLLNLARGV---HVVEDDLLAALDS 242 (312)
T ss_pred HHHHHhcC-CCCcEEEECCCcc---ccCHHHHHHHHhc
Confidence 3 234444 4466777777532 2344444444443
No 386
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=97.23 E-value=0.0041 Score=45.19 Aligned_cols=76 Identities=22% Similarity=0.290 Sum_probs=55.4
Q ss_pred EEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEEEecCCC
Q 042455 27 AIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVMELDLSS 86 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 86 (138)
++|.|+ ||+|.++++.|+..|. ++.+++.+ ..+++.+.+.+.+..|..++..+..++.+
T Consensus 2 VlVVGa-GGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~ 80 (291)
T cd01488 2 ILVIGA-GGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD 80 (291)
T ss_pred EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence 678876 7999999999999997 78888653 23456666777777888888888888875
Q ss_pred HHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 87 LASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
.+ ..+ +..+|++|.+..
T Consensus 81 ~~--~~f-------~~~fdvVi~alD 97 (291)
T cd01488 81 KD--EEF-------YRQFNIIICGLD 97 (291)
T ss_pred hh--HHH-------hcCCCEEEECCC
Confidence 32 122 235788887643
No 387
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=97.23 E-value=0.00017 Score=50.68 Aligned_cols=80 Identities=15% Similarity=0.248 Sum_probs=56.1
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHC-CC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALR-GV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFT 98 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~-g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 98 (138)
+.....+||||+-|-+|..+|+.|-.+ |. +|++.+.-..... .... + -++-.|+.|..+++.++-.
T Consensus 41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~~~--G---PyIy~DILD~K~L~eIVVn-- 108 (366)
T KOG2774|consen 41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VTDV--G---PYIYLDILDQKSLEEIVVN-- 108 (366)
T ss_pred cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hccc--C---CchhhhhhccccHHHhhcc--
Confidence 445568999999999999999988765 65 5777665443311 1111 2 2456788888888777654
Q ss_pred hcCCCccEEEECcccCC
Q 042455 99 ARALPLNILINKAGICG 115 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~~ 115 (138)
.+||.+|+-.+...
T Consensus 109 ---~RIdWL~HfSALLS 122 (366)
T KOG2774|consen 109 ---KRIDWLVHFSALLS 122 (366)
T ss_pred ---cccceeeeHHHHHH
Confidence 48999999888653
No 388
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.22 E-value=0.011 Score=43.86 Aligned_cols=91 Identities=13% Similarity=0.096 Sum_probs=59.4
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHH---HHHHhcCCCCeeEEEEecCCCHHHHHHHH-H
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVK---VAIVMQNPAAKVDVMELDLSSLASVRKFA-S 95 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~D~~~~~~~~~~~-~ 95 (138)
..+.|+++.|.|. |.||.++|+.|...|++|++.++++....... ..+.+......+..+.+..+.. ...++ +
T Consensus 142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~--t~~li~~ 218 (330)
T PRK12480 142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE--SYHLFDK 218 (330)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH--HHHHHhH
Confidence 3588999999987 68999999999999999999998765422211 1222222356677777776542 22233 3
Q ss_pred HHHhcCCCccEEEECcccC
Q 042455 96 DFTARALPLNILINKAGIC 114 (138)
Q Consensus 96 ~~~~~~~~id~lv~~ag~~ 114 (138)
+..... +-+.++.|+|..
T Consensus 219 ~~l~~m-k~gavlIN~aRG 236 (330)
T PRK12480 219 AMFDHV-KKGAILVNAARG 236 (330)
T ss_pred HHHhcC-CCCcEEEEcCCc
Confidence 344333 456677777753
No 389
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=97.20 E-value=0.006 Score=46.16 Aligned_cols=82 Identities=22% Similarity=0.383 Sum_probs=59.2
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------chhHHHHHHHHhcCCCCeeEEEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM-------------------AAGRDVKVAIVMQNPAAKVDVME 81 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 81 (138)
+.+.+++|.|+ ||+|..+++.|+..|. ++.+++.+. .+.+.+.+.+.+..|..++..+.
T Consensus 40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 118 (392)
T PRK07878 40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE 118 (392)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence 46788999988 6999999999999998 788887631 34555667777777778888777
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 82 LDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 82 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
..++. +....++. ..|++|.+..
T Consensus 119 ~~i~~-~~~~~~~~-------~~D~Vvd~~d 141 (392)
T PRK07878 119 FRLDP-SNAVELFS-------QYDLILDGTD 141 (392)
T ss_pred ccCCh-hHHHHHHh-------cCCEEEECCC
Confidence 77753 23333332 4688887654
No 390
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.20 E-value=0.0043 Score=44.68 Aligned_cols=41 Identities=24% Similarity=0.383 Sum_probs=35.6
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+++++|+|+++++|.++++.+...|+++++++++.++.+.
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~ 184 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA 184 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 57899999999999999999999999999999887665444
No 391
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=97.18 E-value=0.0042 Score=45.80 Aligned_cols=76 Identities=14% Similarity=0.176 Sum_probs=49.3
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
.+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+ .++ +.... .|..+. ++.+ +....
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l-----Ga~~v---i~~~~~-~~~~----~~~~~ 233 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM-----GADKL---VNPQND-DLDH----YKAEK 233 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc-----CCcEE---ecCCcc-cHHH----HhccC
Confidence 5889999986 8999999987778898 688888887765433 223 33211 233222 2222 22223
Q ss_pred CCccEEEECccc
Q 042455 102 LPLNILINKAGI 113 (138)
Q Consensus 102 ~~id~lv~~ag~ 113 (138)
+.+|+++.++|.
T Consensus 234 g~~D~vid~~G~ 245 (343)
T PRK09880 234 GYFDVSFEVSGH 245 (343)
T ss_pred CCCCEEEECCCC
Confidence 568999999884
No 392
>PRK14851 hypothetical protein; Provisional
Probab=97.17 E-value=0.0059 Score=49.29 Aligned_cols=83 Identities=13% Similarity=0.238 Sum_probs=61.7
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVM 80 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 80 (138)
.+.+.+++|.|+ ||+|..+++.|+..|. ++.+++.+ ..+.+-+.+.+....|..++..+
T Consensus 40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~ 118 (679)
T PRK14851 40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF 118 (679)
T ss_pred HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence 367889999986 7999999999999998 78888753 13455566677777888888888
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 81 ELDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 81 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
...++ .+.+..+++ ..|++|.+.-
T Consensus 119 ~~~i~-~~n~~~~l~-------~~DvVid~~D 142 (679)
T PRK14851 119 PAGIN-ADNMDAFLD-------GVDVVLDGLD 142 (679)
T ss_pred ecCCC-hHHHHHHHh-------CCCEEEECCC
Confidence 88885 445555543 4688776553
No 393
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.16 E-value=0.0024 Score=39.60 Aligned_cols=71 Identities=17% Similarity=0.280 Sum_probs=50.5
Q ss_pred EEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 042455 27 AIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNI 106 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 106 (138)
++|.|. +.+|+.+++.|.+.+.+|++++++++..+++.. . + +.++.+|.++++.++++- ..+.+.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~----~--~--~~~i~gd~~~~~~l~~a~------i~~a~~ 65 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE----E--G--VEVIYGDATDPEVLERAG------IEKADA 65 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH----T--T--SEEEES-TTSHHHHHHTT------GGCESE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh----c--c--cccccccchhhhHHhhcC------ccccCE
Confidence 466777 589999999999977799999999877555432 2 2 668889999888876552 125677
Q ss_pred EEECcc
Q 042455 107 LINKAG 112 (138)
Q Consensus 107 lv~~ag 112 (138)
+|....
T Consensus 66 vv~~~~ 71 (116)
T PF02254_consen 66 VVILTD 71 (116)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 766654
No 394
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.16 E-value=0.0023 Score=48.89 Aligned_cols=57 Identities=19% Similarity=0.148 Sum_probs=41.6
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHH
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASV 90 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~ 90 (138)
.++|.|+ |.+|..+++.|.++|..|++++++++..+..... ..+.++.+|.++...+
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-------~~~~~~~gd~~~~~~l 58 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-------LDVRTVVGNGSSPDVL 58 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cCEEEEEeCCCCHHHH
Confidence 5788887 8999999999999999999999988776554321 1244555666654443
No 395
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=97.15 E-value=0.0038 Score=45.50 Aligned_cols=58 Identities=19% Similarity=0.298 Sum_probs=42.5
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc---------------------chhHHHHHHHHhcCCCCeeEEEEec
Q 042455 26 TAIVTGASSGIGAETTRVLALRGV-HVIMADRNM---------------------AAGRDVKVAIVMQNPAAKVDVMELD 83 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~~~~D 83 (138)
+++|.|+ ||+|..+++.|+..|. ++.+++.+. .+++.+.+.+++..|..++..+...
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~ 79 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLS 79 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeee
Confidence 3677877 6999999999999998 788886521 2345566677777777777776654
Q ss_pred C
Q 042455 84 L 84 (138)
Q Consensus 84 ~ 84 (138)
+
T Consensus 80 I 80 (307)
T cd01486 80 I 80 (307)
T ss_pred c
Confidence 4
No 396
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.14 E-value=0.0057 Score=40.61 Aligned_cols=44 Identities=20% Similarity=0.275 Sum_probs=32.7
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
...+.||+++|.|- |-+|+.+|+.|...|++|.++..++.++-+
T Consensus 18 ~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alq 61 (162)
T PF00670_consen 18 NLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQ 61 (162)
T ss_dssp -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH
T ss_pred ceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHH
Confidence 45688999999987 699999999999999999999998765443
No 397
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.12 E-value=0.0065 Score=44.97 Aligned_cols=42 Identities=26% Similarity=0.280 Sum_probs=36.2
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVK 65 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~ 65 (138)
.|++++|+|.+ |+|...++.....|++|++++|++++.+...
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~ 207 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK 207 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH
Confidence 58999999998 9999888877778999999999998866543
No 398
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.09 E-value=0.0096 Score=44.10 Aligned_cols=90 Identities=11% Similarity=0.097 Sum_probs=57.2
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHH-----HHHHhcCCCCeeEEEEecCCCHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVK-----VAIVMQNPAAKVDVMELDLSSLASVRKFA 94 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~ 94 (138)
.++.||++.|.|. |.||+++|+.|...|++|+..+|......... ..+.+......+..+.+.++. +...++
T Consensus 146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~--~T~~~i 222 (333)
T PRK13243 146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTK--ETYHMI 222 (333)
T ss_pred cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCCh--HHhhcc
Confidence 4689999999999 79999999999999999999988654321100 012222224567777777653 233333
Q ss_pred -HHHHhcCCCccEEEECccc
Q 042455 95 -SDFTARALPLNILINKAGI 113 (138)
Q Consensus 95 -~~~~~~~~~id~lv~~ag~ 113 (138)
++..+.+ +.+.++.|.+.
T Consensus 223 ~~~~~~~m-k~ga~lIN~aR 241 (333)
T PRK13243 223 NEERLKLM-KPTAILVNTAR 241 (333)
T ss_pred CHHHHhcC-CCCeEEEECcC
Confidence 2333333 45566666665
No 399
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.08 E-value=0.0038 Score=52.46 Aligned_cols=77 Identities=19% Similarity=0.312 Sum_probs=58.8
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCC-CE-------------EEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRG-VH-------------VIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLA 88 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~ 88 (138)
..|.++|.|+ |.+|...++.|++.. +. |.+++++.+.++++.+.+ + .+..+++|++|.+
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~--~~~~v~lDv~D~e 640 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----E--NAEAVQLDVSDSE 640 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----C--CCceEEeecCCHH
Confidence 4678999997 899999999998753 33 777888877766555432 1 3567899999998
Q ss_pred HHHHHHHHHHhcCCCccEEEECccc
Q 042455 89 SVRKFASDFTARALPLNILINKAGI 113 (138)
Q Consensus 89 ~~~~~~~~~~~~~~~id~lv~~ag~ 113 (138)
++.++++ .+|+||++...
T Consensus 641 ~L~~~v~-------~~DaVIsalP~ 658 (1042)
T PLN02819 641 SLLKYVS-------QVDVVISLLPA 658 (1042)
T ss_pred HHHHhhc-------CCCEEEECCCc
Confidence 8776655 37999999875
No 400
>PRK06487 glycerate dehydrogenase; Provisional
Probab=97.08 E-value=0.0039 Score=45.84 Aligned_cols=91 Identities=14% Similarity=0.163 Sum_probs=58.0
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH-HH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASD-FT 98 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~ 98 (138)
.++.||++.|.|. |.||+++|+.+..-|++|+..++...........+.+......+..+.+.++... ..++.+ ..
T Consensus 144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T--~~li~~~~~ 220 (317)
T PRK06487 144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHT--RHLIGAREL 220 (317)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHH--hcCcCHHHH
Confidence 3689999999998 7999999999999999999888753211000111222222467888888877443 333322 22
Q ss_pred hcCCCccEEEECcccC
Q 042455 99 ARALPLNILINKAGIC 114 (138)
Q Consensus 99 ~~~~~id~lv~~ag~~ 114 (138)
+.+ +.+.++.|+|..
T Consensus 221 ~~m-k~ga~lIN~aRG 235 (317)
T PRK06487 221 ALM-KPGALLINTARG 235 (317)
T ss_pred hcC-CCCeEEEECCCc
Confidence 222 456777777753
No 401
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.07 E-value=0.0025 Score=47.02 Aligned_cols=78 Identities=17% Similarity=0.138 Sum_probs=47.3
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCC-------EEEEEecCc--chhHHHHHHHHhcC-CCCeeEEEEecCCCHHHHHHHHH
Q 042455 26 TAIVTGASSGIGAETTRVLALRGV-------HVIMADRNM--AAGRDVKVAIVMQN-PAAKVDVMELDLSSLASVRKFAS 95 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~ 95 (138)
++.|+|++|.+|..++..|+..|. .++++++++ +.++....++.... +... ...++ .
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~----~~~i~---------~ 68 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLK----GVVIT---------T 68 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccC----CcEEe---------c
Confidence 578999999999999999998663 499999987 44333222222110 0000 00111 1
Q ss_pred HHHhcCCCccEEEECcccCCC
Q 042455 96 DFTARALPLNILINKAGICGT 116 (138)
Q Consensus 96 ~~~~~~~~id~lv~~ag~~~~ 116 (138)
...+.+...|++|+.||....
T Consensus 69 ~~~~~~~~aDiVVitAG~~~~ 89 (323)
T cd00704 69 DPEEAFKDVDVAILVGAFPRK 89 (323)
T ss_pred ChHHHhCCCCEEEEeCCCCCC
Confidence 112233468999999998643
No 402
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.06 E-value=0.0069 Score=44.15 Aligned_cols=40 Identities=28% Similarity=0.375 Sum_probs=35.5
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcch
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAA 60 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~ 60 (138)
.++.+++++|.|. |++|+.+++.|...|++|.+++|+.++
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~ 187 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH 187 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 4567999999998 679999999999999999999998655
No 403
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.02 E-value=0.01 Score=40.92 Aligned_cols=40 Identities=15% Similarity=0.302 Sum_probs=34.5
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA 59 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~ 59 (138)
+.+++||.++|.|| |.+|..-++.|++.|++|.+++.+..
T Consensus 4 ~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~ 43 (205)
T TIGR01470 4 FANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE 43 (205)
T ss_pred EEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 34689999999998 58999999999999999999887543
No 404
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=97.01 E-value=0.013 Score=42.56 Aligned_cols=90 Identities=14% Similarity=0.131 Sum_probs=58.0
Q ss_pred CCCEEEEeCCCCchHHHH--HHHHHHCCCE-EEEE-ec-----Ccch----hHHHHHHHHhcCCCCeeEEEEecCCCHHH
Q 042455 23 AGVTAIVTGASSGIGAET--TRVLALRGVH-VIMA-DR-----NMAA----GRDVKVAIVMQNPAAKVDVMELDLSSLAS 89 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~--a~~l~~~g~~-v~~~-~r-----~~~~----~~~~~~~l~~~~~~~~~~~~~~D~~~~~~ 89 (138)
-.|.+||+|+++|.|++. +..+- .|+. +-+. -| ++.. ......+..... +-...-+..|.-+-+-
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~k-GlyAksingDaFS~e~ 117 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQK-GLYAKSINGDAFSDEM 117 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhc-CceeeecccchhhHHH
Confidence 468999999999998874 33333 4554 3222 22 1111 111222222221 4556667889888888
Q ss_pred HHHHHHHHHhcCCCccEEEECcccC
Q 042455 90 VRKFASDFTARALPLNILINKAGIC 114 (138)
Q Consensus 90 ~~~~~~~~~~~~~~id~lv~~ag~~ 114 (138)
-+.+++.++..+|++|.+|++-+..
T Consensus 118 k~kvIe~Ik~~~g~vDlvvYSlAsp 142 (398)
T COG3007 118 KQKVIEAIKQDFGKVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhhccccEEEEeccCc
Confidence 8888999999999999999987754
No 405
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=97.01 E-value=0.0077 Score=43.81 Aligned_cols=41 Identities=29% Similarity=0.353 Sum_probs=34.9
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+..++|.|+++++|.++++.....|++|+++.+++++.+.
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~ 179 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEF 179 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHH
Confidence 57899999999999999988888889999998887665443
No 406
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=97.00 E-value=0.0079 Score=43.51 Aligned_cols=80 Identities=20% Similarity=0.229 Sum_probs=51.4
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
.+.+++|+|+++++|.++++.+...|++|+.++++.++.+.+ .++ +... ..|..+.+..+.+... . ...
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~~~~~-~-~~~ 210 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GADV---AVDYTRPDWPDQVREA-L-GGG 210 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCCE---EEecCCccHHHHHHHH-c-CCC
Confidence 477899999999999999998888999999998877665443 222 2211 1233333333332221 1 112
Q ss_pred CccEEEECccc
Q 042455 103 PLNILINKAGI 113 (138)
Q Consensus 103 ~id~lv~~ag~ 113 (138)
.+|+++++.|.
T Consensus 211 ~~d~vl~~~g~ 221 (324)
T cd08244 211 GVTVVLDGVGG 221 (324)
T ss_pred CceEEEECCCh
Confidence 58999998763
No 407
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.99 E-value=0.0041 Score=40.36 Aligned_cols=44 Identities=23% Similarity=0.274 Sum_probs=38.3
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+++||.++|.|.+..+|+.++..|.++|+.|.++.++...+++
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 47899999999999999999999999999999999876544443
No 408
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.99 E-value=0.0022 Score=45.76 Aligned_cols=78 Identities=14% Similarity=0.168 Sum_probs=51.5
Q ss_pred EEEeCCCCchHHHHHHHHHHCC----CEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 27 AIVTGASSGIGAETTRVLALRG----VHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
+.|+|++|.+|..++..|+..| .+|++++.++++++....+++...... .....-.++ +.... +.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~--d~~~~-------~~ 69 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITD--DPYEA-------FK 69 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECC--chHHH-------hC
Confidence 3689998899999999999988 589999999988877777765442111 001111111 11111 23
Q ss_pred CccEEEECcccCC
Q 042455 103 PLNILINKAGICG 115 (138)
Q Consensus 103 ~id~lv~~ag~~~ 115 (138)
.-|++|..+|..+
T Consensus 70 ~aDiVv~t~~~~~ 82 (263)
T cd00650 70 DADVVIITAGVGR 82 (263)
T ss_pred CCCEEEECCCCCC
Confidence 4799999998754
No 409
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=96.97 E-value=0.012 Score=44.00 Aligned_cols=78 Identities=18% Similarity=0.155 Sum_probs=49.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCC-HHHHHHHHHHHHhc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSS-LASVRKFASDFTAR 100 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 100 (138)
.+.+++|+|+ +++|...++.....|+ +|+++++++++.+.+ .++ +... ..|..+ .+.+...+.++..
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~~---~i~~~~~~~~~~~~v~~~~~- 253 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GATD---CVNPNDYDKPIQEVIVEITD- 253 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCe---EEcccccchhHHHHHHHHhC-
Confidence 5789999985 8999999887777898 799998887765543 222 3221 223322 1223333333322
Q ss_pred CCCccEEEECcc
Q 042455 101 ALPLNILINKAG 112 (138)
Q Consensus 101 ~~~id~lv~~ag 112 (138)
+.+|++|.++|
T Consensus 254 -~g~d~vid~~G 264 (368)
T TIGR02818 254 -GGVDYSFECIG 264 (368)
T ss_pred -CCCCEEEECCC
Confidence 36899998877
No 410
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.97 E-value=0.017 Score=38.30 Aligned_cols=88 Identities=23% Similarity=0.214 Sum_probs=56.5
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCC-----CCeeEEEEecCCCHHHHHHHHHH--H
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNP-----AAKVDVMELDLSSLASVRKFASD--F 97 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~--~ 97 (138)
+++-++|. |.+|..+++.|++.|++|.+.+|++++.+++...-..... -.....+-.=+.+.+.+++++.. +
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 46777887 7999999999999999999999998877665432100000 01123344445677888888887 7
Q ss_pred HhcCCCccEEEECccc
Q 042455 98 TARALPLNILINKAGI 113 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~ 113 (138)
.....+=.++|.+...
T Consensus 81 ~~~l~~g~iiid~sT~ 96 (163)
T PF03446_consen 81 LAGLRPGKIIIDMSTI 96 (163)
T ss_dssp GGGS-TTEEEEE-SS-
T ss_pred hhccccceEEEecCCc
Confidence 7766666777766654
No 411
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.96 E-value=0.013 Score=43.39 Aligned_cols=40 Identities=25% Similarity=0.288 Sum_probs=34.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|.|+ +++|...++.+...|++|+++++++++.+.
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~ 205 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEM 205 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4789999999 999999988888889999999888776554
No 412
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=96.96 E-value=0.007 Score=46.82 Aligned_cols=77 Identities=17% Similarity=0.190 Sum_probs=52.6
Q ss_pred CCCCCEEEEeCCC----------------CchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecC
Q 042455 21 DAAGVTAIVTGAS----------------SGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDL 84 (138)
Q Consensus 21 ~~~~k~~litG~~----------------~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~ 84 (138)
++.||++|||+|. |-.|+++|+.+...|++|.+++-.... . . ...+..+. +
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~--------~--~-p~~v~~i~--V 319 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL--------A--D-PQGVKVIH--V 319 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC--------C--C-CCCceEEE--e
Confidence 5899999999763 458999999999999999998754211 0 1 22244443 3
Q ss_pred CCHHHHHHHHHHHHhcCCCccEEEECcccC
Q 042455 85 SSLASVRKFASDFTARALPLNILINKAGIC 114 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 114 (138)
.+..++.+.+.+ .+. .|++|.+|++.
T Consensus 320 ~ta~eM~~av~~---~~~-~Di~I~aAAVa 345 (475)
T PRK13982 320 ESARQMLAAVEA---ALP-ADIAIFAAAVA 345 (475)
T ss_pred cCHHHHHHHHHh---hCC-CCEEEEecccc
Confidence 345555444443 333 69999999986
No 413
>PLN02928 oxidoreductase family protein
Probab=96.95 E-value=0.0088 Score=44.56 Aligned_cols=38 Identities=26% Similarity=0.344 Sum_probs=34.2
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCc
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNM 58 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~ 58 (138)
.++.||++.|.|. |.||+++|+.+...|++|+.++|+.
T Consensus 155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence 3688999999998 7999999999999999999998863
No 414
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.95 E-value=0.011 Score=42.44 Aligned_cols=41 Identities=20% Similarity=0.303 Sum_probs=35.1
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|.|+++++|.++++.....|++|+.+.+++++.+.
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 182 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAAL 182 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 57899999999999999999888899999988887765443
No 415
>PLN02740 Alcohol dehydrogenase-like
Probab=96.93 E-value=0.011 Score=44.37 Aligned_cols=79 Identities=18% Similarity=0.168 Sum_probs=49.7
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCH-HHHHHHHHHHHhc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSL-ASVRKFASDFTAR 100 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~ 100 (138)
.+++++|.|+ +++|...++.+...|+ +|+++++++++.+.+. ++ +... ..|..+. +.+...+.+...
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~-----Ga~~---~i~~~~~~~~~~~~v~~~~~- 266 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM-----GITD---FINPKDSDKPVHERIREMTG- 266 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc-----CCcE---EEecccccchHHHHHHHHhC-
Confidence 5789999985 8999999988888898 6999988877655432 22 3221 1233221 123333333322
Q ss_pred CCCccEEEECccc
Q 042455 101 ALPLNILINKAGI 113 (138)
Q Consensus 101 ~~~id~lv~~ag~ 113 (138)
+.+|+++.++|.
T Consensus 267 -~g~dvvid~~G~ 278 (381)
T PLN02740 267 -GGVDYSFECAGN 278 (381)
T ss_pred -CCCCEEEECCCC
Confidence 258888888884
No 416
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=96.93 E-value=0.0076 Score=43.72 Aligned_cols=42 Identities=26% Similarity=0.389 Sum_probs=35.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDV 64 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~ 64 (138)
.+++++|.|+++++|.++++.....|++|+++++++++.+.+
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 187 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL 187 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence 367999999999999999998888999999998887665443
No 417
>PRK04148 hypothetical protein; Provisional
Probab=96.91 E-value=0.0029 Score=40.67 Aligned_cols=54 Identities=20% Similarity=0.167 Sum_probs=41.7
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSS 86 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 86 (138)
+++.++++|.+ .|.++|..|.+.|++|++++.++...+..... .+.++..|+.+
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~ 69 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFN 69 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCC
Confidence 45789999987 77788999999999999999998865554322 24667777765
No 418
>PRK14852 hypothetical protein; Provisional
Probab=96.91 E-value=0.012 Score=49.11 Aligned_cols=82 Identities=15% Similarity=0.237 Sum_probs=60.9
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecC-------------------cchhHHHHHHHHhcCCCCeeEEEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRN-------------------MAAGRDVKVAIVMQNPAAKVDVME 81 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 81 (138)
+.+.+|+|.|+ ||+|..+++.|+..|. ++.+++-+ ..+++.+.+.+++..|..++..+.
T Consensus 330 L~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~ 408 (989)
T PRK14852 330 LLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP 408 (989)
T ss_pred HhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence 56788999986 6999999999999997 78888653 235566677777778888888887
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 82 LDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 82 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
..++ .+.+..+++ ..|++|.+.-
T Consensus 409 ~~I~-~en~~~fl~-------~~DiVVDa~D 431 (989)
T PRK14852 409 EGVA-AETIDAFLK-------DVDLLVDGID 431 (989)
T ss_pred cCCC-HHHHHHHhh-------CCCEEEECCC
Confidence 7774 455555443 4688876553
No 419
>PLN03139 formate dehydrogenase; Provisional
Probab=96.91 E-value=0.023 Score=42.97 Aligned_cols=91 Identities=20% Similarity=0.165 Sum_probs=57.4
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHH-------HHHHHhcCCCCeeEEEEecCCCHHHHH
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDV-------KVAIVMQNPAAKVDVMELDLSSLASVR 91 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~~~D~~~~~~~~ 91 (138)
..++.||++.|.|. |.||+++++.|...|++|+..++.....+.. ...+.+..+...+..+.+..+ ++.+
T Consensus 194 ~~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt--~~T~ 270 (386)
T PLN03139 194 AYDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLT--EKTR 270 (386)
T ss_pred CcCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCC--HHHH
Confidence 35689999999996 7899999999999999998888764221110 012222223456777666654 3455
Q ss_pred HHHH-HHHhcCCCccEEEECccc
Q 042455 92 KFAS-DFTARALPLNILINKAGI 113 (138)
Q Consensus 92 ~~~~-~~~~~~~~id~lv~~ag~ 113 (138)
.++. +..+.+ +.+.++.|.|.
T Consensus 271 ~li~~~~l~~m-k~ga~lIN~aR 292 (386)
T PLN03139 271 GMFNKERIAKM-KKGVLIVNNAR 292 (386)
T ss_pred HHhCHHHHhhC-CCCeEEEECCC
Confidence 5553 333444 34556666664
No 420
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=96.90 E-value=0.0077 Score=44.16 Aligned_cols=78 Identities=19% Similarity=0.196 Sum_probs=49.4
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVH-VIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
.+.+++|+|+ +++|...++.+...|++ |+++++++++.+.+ .++ +... ..|..+.+ .+++. +.. ..
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~~---~i~~~~~~-~~~~~-~~~-~~ 229 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GADF---VINSGQDD-VQEIR-ELT-SG 229 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE---EEcCCcch-HHHHH-HHh-CC
Confidence 4889999986 89999999988888997 99888877665433 233 3211 22333333 33322 221 11
Q ss_pred CCccEEEECccc
Q 042455 102 LPLNILINKAGI 113 (138)
Q Consensus 102 ~~id~lv~~ag~ 113 (138)
..+|++|.+.|.
T Consensus 230 ~~~d~vid~~g~ 241 (339)
T cd08239 230 AGADVAIECSGN 241 (339)
T ss_pred CCCCEEEECCCC
Confidence 258999988773
No 421
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.89 E-value=0.019 Score=44.14 Aligned_cols=38 Identities=26% Similarity=0.523 Sum_probs=33.4
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
++.|+||.|.+|.++++.|.+.|.+|.+++|+++...+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~ 39 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE 39 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence 58899999999999999999999999999998766433
No 422
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=96.89 E-value=0.014 Score=43.54 Aligned_cols=78 Identities=15% Similarity=0.131 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCH-HHHHHHHHHHHhc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSL-ASVRKFASDFTAR 100 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~ 100 (138)
.+.+++|.|+ +++|...++.+...|+ +|+++++++++.+.+ .++ +... ..|..+. +++...+.+...
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~~---~i~~~~~~~~~~~~v~~~~~- 254 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GATD---CVNPKDHDKPIQQVLVEMTD- 254 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCE---EEcccccchHHHHHHHHHhC-
Confidence 4789999975 8999999988888899 699999888775543 222 3221 1233332 234444444332
Q ss_pred CCCccEEEECcc
Q 042455 101 ALPLNILINKAG 112 (138)
Q Consensus 101 ~~~id~lv~~ag 112 (138)
+.+|+++.++|
T Consensus 255 -~g~d~vid~~g 265 (368)
T cd08300 255 -GGVDYTFECIG 265 (368)
T ss_pred -CCCcEEEECCC
Confidence 36899999877
No 423
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.89 E-value=0.0078 Score=43.59 Aligned_cols=41 Identities=27% Similarity=0.290 Sum_probs=34.9
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|.|+++++|.++++.....|++++++.++.++.+.
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~ 179 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAE 179 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence 57899999999999999999888899999888877665444
No 424
>PLN02602 lactate dehydrogenase
Probab=96.88 E-value=0.02 Score=42.76 Aligned_cols=77 Identities=13% Similarity=0.154 Sum_probs=53.3
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCC--EEEEEecCcchhHHHHHHHHhcCCC-CeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGV--HVIMADRNMAAGRDVKVAIVMQNPA-AKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
+++.|+|+ |.+|..++..++..+. .+++++.+++.++....+|....+- ... -+... .+.+ . +
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy~-------~----~ 103 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDYA-------V----T 103 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCHH-------H----h
Confidence 58999996 8999999999998875 7999999998887777777644210 111 11111 1222 1 1
Q ss_pred CCccEEEECcccCC
Q 042455 102 LPLNILINKAGICG 115 (138)
Q Consensus 102 ~~id~lv~~ag~~~ 115 (138)
..-|++|..||...
T Consensus 104 ~daDiVVitAG~~~ 117 (350)
T PLN02602 104 AGSDLCIVTAGARQ 117 (350)
T ss_pred CCCCEEEECCCCCC
Confidence 35699999999864
No 425
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=96.88 E-value=0.0014 Score=47.19 Aligned_cols=84 Identities=13% Similarity=0.106 Sum_probs=59.8
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHC--CCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 24 GVTAIVTGASSGIGAETTRVLALR--GVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
.|.++|||+++-||.-.+..+... .++.+.++.-.--.. ...+++.....+..+++.|+.+...+..++.+
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~----- 78 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRNSPNYKFVEGDIADADLVLYLFET----- 78 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhccCCCceEeeccccchHHHHhhhcc-----
Confidence 388999999999999999999986 345555433111000 12222222256789999999999998887765
Q ss_pred CCccEEEECcccC
Q 042455 102 LPLNILINKAGIC 114 (138)
Q Consensus 102 ~~id~lv~~ag~~ 114 (138)
.+||.++|.|+..
T Consensus 79 ~~id~vihfaa~t 91 (331)
T KOG0747|consen 79 EEIDTVIHFAAQT 91 (331)
T ss_pred CchhhhhhhHhhh
Confidence 4899999999865
No 426
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.87 E-value=0.0084 Score=45.86 Aligned_cols=62 Identities=15% Similarity=0.222 Sum_probs=45.4
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHH
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASV 90 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~ 90 (138)
...+.++|.|+ |.+|..+++.|.+.|.+|++++++++..+...... ..+..+..|.++.+.+
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~------~~~~~i~gd~~~~~~L 290 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL------PNTLVLHGDGTDQELL 290 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC------CCCeEEECCCCCHHHH
Confidence 34678999998 89999999999999999999999887655543321 1234556666655544
No 427
>PRK05086 malate dehydrogenase; Provisional
Probab=96.87 E-value=0.017 Score=42.47 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=28.1
Q ss_pred CEEEEeCCCCchHHHHHHHHHH-C--CCEEEEEecCcc
Q 042455 25 VTAIVTGASSGIGAETTRVLAL-R--GVHVIMADRNMA 59 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~-~--g~~v~~~~r~~~ 59 (138)
++++|+||+|++|.+++..+.. . +..++++++++.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~ 38 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV 38 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence 3689999999999999998865 3 347888888743
No 428
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=96.87 E-value=0.0074 Score=43.15 Aligned_cols=42 Identities=24% Similarity=0.221 Sum_probs=35.6
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDV 64 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~ 64 (138)
.+.+++|.|+++++|.++++.....|++|+++.+++++.+.+
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 177 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA 177 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 578999999999999999998888899998888877665443
No 429
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=96.86 E-value=0.0087 Score=42.90 Aligned_cols=41 Identities=27% Similarity=0.346 Sum_probs=35.1
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|+|+++++|.+++..+...|+.|+.++++.++.+.
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 179 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL 179 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence 57899999999999999999888899999998887655443
No 430
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.86 E-value=0.0043 Score=43.09 Aligned_cols=42 Identities=19% Similarity=0.318 Sum_probs=36.2
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHH
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVA 67 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~ 67 (138)
++.|+|++|.+|.++++.|++.|++|.+.+|++++.+.+...
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 478999999999999999999999999999998877665443
No 431
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=96.85 E-value=0.021 Score=41.42 Aligned_cols=42 Identities=14% Similarity=0.285 Sum_probs=34.9
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDV 64 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~ 64 (138)
.+.+++|.|+++++|+++++.+...|++++++.+++++.+.+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 181 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC 181 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 478999999999999999999889999888888776554443
No 432
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=96.84 E-value=0.0088 Score=43.39 Aligned_cols=62 Identities=23% Similarity=0.340 Sum_probs=47.2
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------chhHHHHHHHHhcCCCCeeEEE
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM-------------------AAGRDVKVAIVMQNPAAKVDVM 80 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 80 (138)
.+.+.+++|.|+ +|+|.++++.|+..|. ++.+++.+. .+++.....|++..|..++..+
T Consensus 16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~ 94 (286)
T cd01491 16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS 94 (286)
T ss_pred HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 356788999988 6999999999999998 688887532 3455566777777777777666
Q ss_pred Eec
Q 042455 81 ELD 83 (138)
Q Consensus 81 ~~D 83 (138)
..+
T Consensus 95 ~~~ 97 (286)
T cd01491 95 TGP 97 (286)
T ss_pred ecc
Confidence 654
No 433
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.84 E-value=0.016 Score=43.14 Aligned_cols=41 Identities=17% Similarity=0.269 Sum_probs=32.3
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDV 64 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~ 64 (138)
.+++++|.|+ +++|...++.....|++|++++.+.++..+.
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~ 223 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEA 223 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhH
Confidence 5789999775 8999999888888899988887776554433
No 434
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=96.83 E-value=0.018 Score=42.91 Aligned_cols=78 Identities=15% Similarity=0.204 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCH-HHHHHHHHHHHhc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSL-ASVRKFASDFTAR 100 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~ 100 (138)
.+.+++|.|+ +++|...++.+...|+ +|+++++++++.+.+ .++ +... ..|..+. +.+.+.+.+...
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~~---~i~~~~~~~~~~~~v~~~~~- 255 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVTE---FVNPKDHDKPVQEVIAEMTG- 255 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCce---EEcccccchhHHHHHHHHhC-
Confidence 5789999985 8999998888778898 799998887665543 222 3221 1122221 234444444332
Q ss_pred CCCccEEEECcc
Q 042455 101 ALPLNILINKAG 112 (138)
Q Consensus 101 ~~~id~lv~~ag 112 (138)
+.+|+++.+.|
T Consensus 256 -~~~d~vid~~G 266 (369)
T cd08301 256 -GGVDYSFECTG 266 (369)
T ss_pred -CCCCEEEECCC
Confidence 26898888876
No 435
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=96.82 E-value=0.0097 Score=43.02 Aligned_cols=41 Identities=22% Similarity=0.219 Sum_probs=35.1
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|.|+++++|.++++.+...|++++++.+++++.+.
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 178 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE 178 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHH
Confidence 57799999999999999999888999999888887765443
No 436
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=96.82 E-value=0.0039 Score=45.35 Aligned_cols=81 Identities=14% Similarity=0.226 Sum_probs=52.3
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
-+|.+++|++|++..|.-+.+--.-+|++|+.+.-.+++-.-+.+++ +... ..|--.. ++.+.+.+..-
T Consensus 149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l-----GfD~---~idyk~~-d~~~~L~~a~P-- 217 (340)
T COG2130 149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL-----GFDA---GIDYKAE-DFAQALKEACP-- 217 (340)
T ss_pred CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc-----CCce---eeecCcc-cHHHHHHHHCC--
Confidence 36899999999999997655533346999999988888766555544 3221 2233222 33333333221
Q ss_pred CCccEEEECccc
Q 042455 102 LPLNILINKAGI 113 (138)
Q Consensus 102 ~~id~lv~~ag~ 113 (138)
..||+.+-|.|-
T Consensus 218 ~GIDvyfeNVGg 229 (340)
T COG2130 218 KGIDVYFENVGG 229 (340)
T ss_pred CCeEEEEEcCCc
Confidence 369999999994
No 437
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=96.82 E-value=0.041 Score=43.06 Aligned_cols=85 Identities=24% Similarity=0.238 Sum_probs=56.7
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCC-------------CH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLS-------------SL 87 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-------------~~ 87 (138)
...+.+++|.|+ |.+|...++.+...|++|++++++.++.+... .+ +.. ++..|.. +.
T Consensus 161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~l-----Ga~--~v~v~~~e~g~~~~gYa~~~s~ 231 (511)
T TIGR00561 161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SM-----GAE--FLELDFKEEGGSGDGYAKVMSE 231 (511)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCe--EEeccccccccccccceeecCH
Confidence 345679999997 79999999999999999999999877644322 22 332 2233321 13
Q ss_pred HHHHHHHHHHHhcCCCccEEEECcccC
Q 042455 88 ASVRKFASDFTARALPLNILINKAGIC 114 (138)
Q Consensus 88 ~~~~~~~~~~~~~~~~id~lv~~ag~~ 114 (138)
+..+...+...++....|++|+++-+.
T Consensus 232 ~~~~~~~~~~~e~~~~~DIVI~Talip 258 (511)
T TIGR00561 232 EFIAAEMELFAAQAKEVDIIITTALIP 258 (511)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECcccC
Confidence 344444444455556799999999443
No 438
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=96.80 E-value=0.0027 Score=36.55 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=21.8
Q ss_pred CC-CEEEEeCCCCchHHH--HHHHHHHCCCEEEEEecC
Q 042455 23 AG-VTAIVTGASSGIGAE--TTRVLALRGVHVIMADRN 57 (138)
Q Consensus 23 ~~-k~~litG~~~~iG~~--~a~~l~~~g~~v~~~~r~ 57 (138)
++ |++||+|+++|.|++ ++..+ ..|++.+-++..
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE 73 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE 73 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence 44 899999999999999 44444 557776666543
No 439
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.80 E-value=0.0054 Score=41.44 Aligned_cols=41 Identities=24% Similarity=0.301 Sum_probs=32.5
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHH
Q 042455 26 TAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVA 67 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~ 67 (138)
++.|.|+ |.+|..+|..++..|++|.+++++++.++.....
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~ 41 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKR 41 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence 4678888 8999999999999999999999998776554433
No 440
>PRK07574 formate dehydrogenase; Provisional
Probab=96.80 E-value=0.022 Score=43.06 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=63.0
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHH-------HHHHHhcCCCCeeEEEEecCCCHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDV-------KVAIVMQNPAAKVDVMELDLSSLASVRK 92 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~~~D~~~~~~~~~ 92 (138)
.++.||++.|.|. |.||+++|+.|...|++|+..+|.....+.. ...+.+......+..+.+.++. +.+.
T Consensus 188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~--~T~~ 264 (385)
T PRK07574 188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHP--ETEH 264 (385)
T ss_pred eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCH--HHHH
Confidence 4688999999998 6899999999999999999999875211100 1122222335667777777653 4445
Q ss_pred HHH-HHHhcCCCccEEEECcccCCCCCccCHHHHHHHhhh
Q 042455 93 FAS-DFTARALPLNILINKAGICGTPFMLSKDNIELHFAT 131 (138)
Q Consensus 93 ~~~-~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~ 131 (138)
++. +..+.+ +-..++.|.+... -++.+.+.+.++.
T Consensus 265 li~~~~l~~m-k~ga~lIN~aRG~---iVDe~AL~~AL~s 300 (385)
T PRK07574 265 LFDADVLSRM-KRGSYLVNTARGK---IVDRDAVVRALES 300 (385)
T ss_pred HhCHHHHhcC-CCCcEEEECCCCc---hhhHHHHHHHHHh
Confidence 553 233444 3345555555432 2344444444443
No 441
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.80 E-value=0.0026 Score=43.78 Aligned_cols=39 Identities=15% Similarity=0.349 Sum_probs=34.6
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCc
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNM 58 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~ 58 (138)
++++++|.++|+|| |.+|...++.|++.|++|.++++..
T Consensus 5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45789999999999 7999999999999999999987653
No 442
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.76 E-value=0.03 Score=35.45 Aligned_cols=80 Identities=16% Similarity=0.186 Sum_probs=53.6
Q ss_pred EEEEeCCCCchHHHHHHHHHH-CCCEE-EEEecCcch-h----H-------------HHHHHHHhcCCCCeeEEEEecCC
Q 042455 26 TAIVTGASSGIGAETTRVLAL-RGVHV-IMADRNMAA-G----R-------------DVKVAIVMQNPAAKVDVMELDLS 85 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~-~g~~v-~~~~r~~~~-~----~-------------~~~~~l~~~~~~~~~~~~~~D~~ 85 (138)
++.|+|++|-+|+.+++.+.+ .+.++ ..++|+++. . . ...+.+... .-+..|+|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~------~DVvIDfT 75 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE------ADVVIDFT 75 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-------SEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc------CCEEEEcC
Confidence 478999999999999999999 57775 445666510 0 0 011112111 11567999
Q ss_pred CHHHHHHHHHHHHhcCCCccEEEECccc
Q 042455 86 SLASVRKFASDFTARALPLNILINKAGI 113 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~id~lv~~ag~ 113 (138)
.++.+...++...+. ++.+++-..|.
T Consensus 76 ~p~~~~~~~~~~~~~--g~~~ViGTTG~ 101 (124)
T PF01113_consen 76 NPDAVYDNLEYALKH--GVPLVIGTTGF 101 (124)
T ss_dssp -HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred ChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence 999999999988776 78999888885
No 443
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=96.76 E-value=0.0061 Score=45.00 Aligned_cols=74 Identities=18% Similarity=0.137 Sum_probs=46.3
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCC-------EEEEEecCcch--hHHHHHHHHhcCCCCeeEEEEecCCCHHH-H-HHHH
Q 042455 26 TAIVTGASSGIGAETTRVLALRGV-------HVIMADRNMAA--GRDVKVAIVMQNPAAKVDVMELDLSSLAS-V-RKFA 94 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~-------~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~~~~~~-~-~~~~ 94 (138)
++.|+|++|.+|..++..|+..+. .++++++++.. ++. ...|+.+... . ..+.
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g----------------~~~Dl~d~~~~~~~~~~ 64 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEG----------------VVMELMDCAFPLLDGVV 64 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccce----------------eEeehhcccchhcCcee
Confidence 378999999999999999998653 49999986543 222 2333333220 0 0000
Q ss_pred --HHHHhcCCCccEEEECcccCC
Q 042455 95 --SDFTARALPLNILINKAGICG 115 (138)
Q Consensus 95 --~~~~~~~~~id~lv~~ag~~~ 115 (138)
....+.+...|++|+.||...
T Consensus 65 ~~~~~~~~~~~aDiVVitAG~~~ 87 (324)
T TIGR01758 65 PTHDPAVAFTDVDVAILVGAFPR 87 (324)
T ss_pred ccCChHHHhCCCCEEEEcCCCCC
Confidence 011233456899999999754
No 444
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.75 E-value=0.0041 Score=41.13 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=32.7
Q ss_pred CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEec
Q 042455 19 GIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADR 56 (138)
Q Consensus 19 ~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r 56 (138)
.++++||.++|.|| |.+|...++.|++.|++|.+++.
T Consensus 8 ~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 8 MFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence 45789999999998 68999999999999999988853
No 445
>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]
Probab=96.75 E-value=0.01 Score=45.72 Aligned_cols=66 Identities=24% Similarity=0.306 Sum_probs=44.2
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------chhHHHHHHHHhcCCCCeeEEEEe
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNM-------------------AAGRDVKVAIVMQNPAAKVDVMEL 82 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~ 82 (138)
.+.++|++|| ||||.++-+.|+-.|. .|.+++.+. +++.-+....+.-.|..++..++.
T Consensus 11 ~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsKA~vA~~~v~~Fnpn~~l~~yha 89 (603)
T KOG2013|consen 11 KSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSKATVAAKAVKQFNPNIKLVPYHA 89 (603)
T ss_pred ccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhhhheeehhhcCchHHHHHHHHHHHhCCCCceEeccc
Confidence 5678999998 6999999999999998 688887643 222222233333344556666666
Q ss_pred cCCCHHH
Q 042455 83 DLSSLAS 89 (138)
Q Consensus 83 D~~~~~~ 89 (138)
|+.+++.
T Consensus 90 nI~e~~f 96 (603)
T KOG2013|consen 90 NIKEPKF 96 (603)
T ss_pred cccCcch
Confidence 6665533
No 446
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=96.74 E-value=0.015 Score=42.58 Aligned_cols=41 Identities=22% Similarity=0.261 Sum_probs=35.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|.|+++++|.++++.+...|++|+++.+++++.+.
T Consensus 165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 205 (341)
T cd08297 165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLEL 205 (341)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 47899999999999999999888999999999988766543
No 447
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.74 E-value=0.021 Score=43.81 Aligned_cols=77 Identities=19% Similarity=0.156 Sum_probs=50.3
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTAR 100 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 100 (138)
++.+|+++|+|.+ +.|.++|+.|+++|+.|.+.+...... ...++.... ..+.++..... .. .+
T Consensus 2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~--~gi~~~~g~~~-~~----~~------ 65 (445)
T PRK04308 2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMF--DGLVFYTGRLK-DA----LD------ 65 (445)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhcc--CCcEEEeCCCC-HH----HH------
Confidence 3568999999986 999999999999999999998765431 122343221 12333332211 11 11
Q ss_pred CCCccEEEECcccC
Q 042455 101 ALPLNILINKAGIC 114 (138)
Q Consensus 101 ~~~id~lv~~ag~~ 114 (138)
...|.||.+.|+.
T Consensus 66 -~~~d~vv~spgi~ 78 (445)
T PRK04308 66 -NGFDILALSPGIS 78 (445)
T ss_pred -hCCCEEEECCCCC
Confidence 2479999999985
No 448
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.73 E-value=0.032 Score=41.18 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=33.6
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhH
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGR 62 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~ 62 (138)
+..+++.|+|+ |.+|..++..++..|. .|++++.+++.+.
T Consensus 4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~ 44 (321)
T PTZ00082 4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQ 44 (321)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhh
Confidence 44578999995 7899999999999995 8999999988654
No 449
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.72 E-value=0.033 Score=40.97 Aligned_cols=77 Identities=12% Similarity=0.144 Sum_probs=52.9
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCC--EEEEEecCcchhHHHHHHHHhcCCCCe-eEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGV--HVIMADRNMAAGRDVKVAIVMQNPAAK-VDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
.++.|+|+ |.+|..++..|+..|. .+++++.+++.++....++....+-.. ...... .|++. +
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------~ 69 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------T 69 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------h
Confidence 47889996 9999999999998874 799999999888777777765431111 111111 12221 2
Q ss_pred CCccEEEECcccCC
Q 042455 102 LPLNILINKAGICG 115 (138)
Q Consensus 102 ~~id~lv~~ag~~~ 115 (138)
..-|++|.++|...
T Consensus 70 ~~adivvitaG~~~ 83 (312)
T cd05293 70 ANSKVVIVTAGARQ 83 (312)
T ss_pred CCCCEEEECCCCCC
Confidence 35699999999764
No 450
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.71 E-value=0.012 Score=43.18 Aligned_cols=104 Identities=10% Similarity=0.127 Sum_probs=63.7
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH--HHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH-
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD--VKVAIVMQNPAAKVDVMELDLSSLASVRKFASD- 96 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~- 96 (138)
.++.||++.|.|- |.||+++|+.+..-|++|+..++.....+. ....+.+......+..+.+.+++.. ..++.+
T Consensus 141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T--~~li~~~ 217 (311)
T PRK08410 141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKT--KNLIAYK 217 (311)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchh--hcccCHH
Confidence 4689999999998 799999999999899999998875321110 0011222222467888888887543 233322
Q ss_pred HHhcCCCccEEEECcccCCCCCccCHHHHHHHhh
Q 042455 97 FTARALPLNILINKAGICGTPFMLSKDNIELHFA 130 (138)
Q Consensus 97 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~ 130 (138)
..+.+ +.+.++.|.|... -++++.+.+.++
T Consensus 218 ~~~~M-k~~a~lIN~aRG~---vVDe~AL~~AL~ 247 (311)
T PRK08410 218 ELKLL-KDGAILINVGRGG---IVNEKDLAKALD 247 (311)
T ss_pred HHHhC-CCCeEEEECCCcc---ccCHHHHHHHHH
Confidence 22222 4677777777532 234444444444
No 451
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.71 E-value=0.015 Score=34.25 Aligned_cols=36 Identities=33% Similarity=0.543 Sum_probs=31.1
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEec
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALR-GVHVIMADR 56 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~-g~~v~~~~r 56 (138)
.++++|+++|.|+ ++.|..+++.|.+. +.++.+++|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4578899999999 89999999999998 457888776
No 452
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.70 E-value=0.0059 Score=43.96 Aligned_cols=43 Identities=16% Similarity=0.300 Sum_probs=37.0
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHH
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVA 67 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~ 67 (138)
+|+++|.|+ ||-+++++..|.+.|+ +|.++.|+.++++++.+.
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~ 165 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL 165 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 568999997 7999999999999998 699999998887776554
No 453
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.68 E-value=0.0018 Score=39.67 Aligned_cols=38 Identities=24% Similarity=0.437 Sum_probs=32.3
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCc
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNM 58 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~ 58 (138)
+++++|.++|+|+ |.+|..-++.|++.|++|.+++...
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 5689999999999 7999999999999999999998875
No 454
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.68 E-value=0.032 Score=43.17 Aligned_cols=76 Identities=16% Similarity=0.153 Sum_probs=50.9
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcch-hHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAA-GRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTA 99 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 99 (138)
.++++.++|.|+ |++|.++|+.|.+.|++|.++++++.. .......++.. + +.++..+-..
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~--g--v~~~~~~~~~------------- 74 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL--G--ATVRLGPGPT------------- 74 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc--C--CEEEECCCcc-------------
Confidence 467889999997 679999999999999999999866543 33333445433 3 3333222111
Q ss_pred cCCCccEEEECcccC
Q 042455 100 RALPLNILINKAGIC 114 (138)
Q Consensus 100 ~~~~id~lv~~ag~~ 114 (138)
.....|.+|.+.|+.
T Consensus 75 ~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 75 LPEDTDLVVTSPGWR 89 (480)
T ss_pred ccCCCCEEEECCCcC
Confidence 013579999999985
No 455
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=96.67 E-value=0.028 Score=42.24 Aligned_cols=41 Identities=17% Similarity=0.290 Sum_probs=34.4
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|+|+++++|.+++......|++++++.+++++.+.
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~ 233 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEY 233 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 47899999999999999998888889998888877666544
No 456
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.67 E-value=0.009 Score=43.29 Aligned_cols=40 Identities=25% Similarity=0.390 Sum_probs=36.0
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA 59 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~ 59 (138)
.+++||.++|+|.+.-+|+.++..|..+|++|.++.+...
T Consensus 154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~ 193 (286)
T PRK14175 154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK 193 (286)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch
Confidence 4689999999999999999999999999999999887543
No 457
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=96.66 E-value=0.023 Score=43.11 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=33.7
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC---EEEEEecCcchhHHHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV---HVIMADRNMAAGRDVK 65 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~ 65 (138)
.+.+++|.|+++++|...++.+...|. +|+++++++++.+...
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~ 220 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ 220 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH
Confidence 467999999999999998886666543 7999998887765543
No 458
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=96.66 E-value=0.026 Score=41.29 Aligned_cols=37 Identities=27% Similarity=0.392 Sum_probs=32.4
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMA 59 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~ 59 (138)
.+++++|.|+++++|.++++.....|++++++.++.+
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP 182 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence 5789999999999999999988889999888877653
No 459
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.66 E-value=0.04 Score=40.56 Aligned_cols=83 Identities=20% Similarity=0.185 Sum_probs=58.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
.|-++||.|| +-||+..-...-.-|+ +|++++-.+++++-..+ + +.++......-++.+.+.+.++......
T Consensus 169 ~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~-----Ga~~~~~~~~~~~~~~~~~~v~~~~g~~ 241 (354)
T KOG0024|consen 169 KGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-F-----GATVTDPSSHKSSPQELAELVEKALGKK 241 (354)
T ss_pred cCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-h-----CCeEEeeccccccHHHHHHHHHhhcccc
Confidence 4678999998 5899888777777787 79999998888776554 4 5554444333334566656655554322
Q ss_pred CCccEEEECccc
Q 042455 102 LPLNILINKAGI 113 (138)
Q Consensus 102 ~~id~lv~~ag~ 113 (138)
.+|+.|.|.|.
T Consensus 242 -~~d~~~dCsG~ 252 (354)
T KOG0024|consen 242 -QPDVTFDCSGA 252 (354)
T ss_pred -CCCeEEEccCc
Confidence 39999999996
No 460
>PRK07877 hypothetical protein; Provisional
Probab=96.64 E-value=0.017 Score=47.03 Aligned_cols=81 Identities=21% Similarity=0.299 Sum_probs=62.9
Q ss_pred CCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEecC------------------cchhHHHHHHHHhcCCCCeeEEEE
Q 042455 22 AAGVTAIVTGASSGIGAETTRVLALRGV--HVIMADRN------------------MAAGRDVKVAIVMQNPAAKVDVME 81 (138)
Q Consensus 22 ~~~k~~litG~~~~iG~~~a~~l~~~g~--~v~~~~r~------------------~~~~~~~~~~l~~~~~~~~~~~~~ 81 (138)
+.+++++|.|+ | +|..++..|+..|. ++.+++.+ ..|.+.+...+....|..++..+.
T Consensus 105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~ 182 (722)
T PRK07877 105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT 182 (722)
T ss_pred HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence 57889999999 4 99999999999993 89998763 235566677777888888899998
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCccEEEECcc
Q 042455 82 LDLSSLASVRKFASDFTARALPLNILINKAG 112 (138)
Q Consensus 82 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 112 (138)
..++ .+.+..+++ ..|++|.+.-
T Consensus 183 ~~i~-~~n~~~~l~-------~~DlVvD~~D 205 (722)
T PRK07877 183 DGLT-EDNVDAFLD-------GLDVVVEECD 205 (722)
T ss_pred ccCC-HHHHHHHhc-------CCCEEEECCC
Confidence 8886 566666554 3688887765
No 461
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=96.64 E-value=0.005 Score=44.15 Aligned_cols=48 Identities=25% Similarity=0.255 Sum_probs=40.7
Q ss_pred cCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHH
Q 042455 18 QGIDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVK 65 (138)
Q Consensus 18 ~~~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~ 65 (138)
.-.+++.-++.|.|++|.||.++|++|+.++....++.|+.+......
T Consensus 161 lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~ 208 (351)
T COG5322 161 LGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQR 208 (351)
T ss_pred hCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhh
Confidence 345778889999999999999999999999999999998776654443
No 462
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=96.61 E-value=0.018 Score=42.60 Aligned_cols=34 Identities=35% Similarity=0.471 Sum_probs=29.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRN 57 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~ 57 (138)
.+++++|+|+ |++|...++.+...|++|++++|+
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence 5789999986 899999998777789999999884
No 463
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.60 E-value=0.0086 Score=43.67 Aligned_cols=44 Identities=20% Similarity=0.251 Sum_probs=38.2
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.++.||.+.|.|.++-+|+.++..|+++|+.|.++.+......+
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e 198 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA 198 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence 46899999999999999999999999999999999776554333
No 464
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.59 E-value=0.042 Score=40.30 Aligned_cols=35 Identities=29% Similarity=0.489 Sum_probs=30.8
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRN 57 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~ 57 (138)
.+.+++|+|+++++|.++++.....|++|+++.++
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~ 196 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST 196 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence 38899999999999999999888889998887764
No 465
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.56 E-value=0.0081 Score=39.88 Aligned_cols=44 Identities=23% Similarity=0.351 Sum_probs=34.2
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+++||+++|.|.+.-+|+.++..|.++|+.|.++......+++
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~ 75 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE 75 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence 46899999999999999999999999999999998776544444
No 466
>PRK06932 glycerate dehydrogenase; Provisional
Probab=96.54 E-value=0.015 Score=42.82 Aligned_cols=91 Identities=19% Similarity=0.182 Sum_probs=57.0
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchh-HHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHH-H
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAG-RDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASD-F 97 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~ 97 (138)
.++.||++.|.|- |.||+++|+.+..-|++|+..++..... ......+.+..+...+..+.+.++.. -..++.. .
T Consensus 143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~--T~~li~~~~ 219 (314)
T PRK06932 143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTET--TQNLINAET 219 (314)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChH--HhcccCHHH
Confidence 4689999999998 7999999999988999998887653211 00001122222246788888887743 2333322 2
Q ss_pred HhcCCCccEEEECcccC
Q 042455 98 TARALPLNILINKAGIC 114 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~ 114 (138)
.+.+ +.+.++.|.|..
T Consensus 220 l~~m-k~ga~lIN~aRG 235 (314)
T PRK06932 220 LALM-KPTAFLINTGRG 235 (314)
T ss_pred HHhC-CCCeEEEECCCc
Confidence 2222 456777777753
No 467
>PLN02827 Alcohol dehydrogenase-like
Probab=96.53 E-value=0.036 Score=41.57 Aligned_cols=79 Identities=15% Similarity=0.219 Sum_probs=48.3
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCH-HHHHHHHHHHHhc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVH-VIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSL-ASVRKFASDFTAR 100 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~ 100 (138)
.+.+++|.|+ +++|...++.....|+. |+++++++++.+.+ .++ +... ..|..+. +.....+.++..
T Consensus 193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l-----Ga~~---~i~~~~~~~~~~~~v~~~~~- 261 (378)
T PLN02827 193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF-----GVTD---FINPNDLSEPIQQVIKRMTG- 261 (378)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCcE---EEcccccchHHHHHHHHHhC-
Confidence 5889999985 89999998887788984 77777776654432 222 3221 1233221 233333333322
Q ss_pred CCCccEEEECccc
Q 042455 101 ALPLNILINKAGI 113 (138)
Q Consensus 101 ~~~id~lv~~ag~ 113 (138)
+.+|++|.++|.
T Consensus 262 -~g~d~vid~~G~ 273 (378)
T PLN02827 262 -GGADYSFECVGD 273 (378)
T ss_pred -CCCCEEEECCCC
Confidence 268888888884
No 468
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.52 E-value=0.038 Score=40.73 Aligned_cols=43 Identities=14% Similarity=0.170 Sum_probs=35.0
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEecCcchhHHHHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRG-VHVIMADRNMAAGRDVKV 66 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~ 66 (138)
..+++.|+|+ |.+|..++..++..| +.+++++.+++.++....
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~l 47 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKAL 47 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHH
Confidence 4568899997 899999999999888 689999999876554333
No 469
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.51 E-value=0.064 Score=39.51 Aligned_cols=76 Identities=12% Similarity=0.132 Sum_probs=53.9
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCC-CHHHHHHHHHHHHhcC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLS-SLASVRKFASDFTARA 101 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~ 101 (138)
.|+++.|+|++| ||.--++.--+-|++|.++++...+-++..+.| +...+ .|.+ |++.++++.+.. .
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L-----GAd~f---v~~~~d~d~~~~~~~~~---d 248 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL-----GADVF---VDSTEDPDIMKAIMKTT---D 248 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc-----Cccee---EEecCCHHHHHHHHHhh---c
Confidence 799999999987 887666655556999999999987777777766 44433 3555 777777776653 1
Q ss_pred CCccEEEEC
Q 042455 102 LPLNILINK 110 (138)
Q Consensus 102 ~~id~lv~~ 110 (138)
+.+|.++|-
T Consensus 249 g~~~~v~~~ 257 (360)
T KOG0023|consen 249 GGIDTVSNL 257 (360)
T ss_pred Ccceeeeec
Confidence 345655544
No 470
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=96.50 E-value=0.025 Score=42.50 Aligned_cols=37 Identities=22% Similarity=0.329 Sum_probs=30.9
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcch
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAA 60 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~ 60 (138)
.+.+++|.|+ +++|...++.....|++|++++++.++
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~ 214 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK 214 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence 5789999886 899999998888889999888876554
No 471
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=96.50 E-value=0.024 Score=41.31 Aligned_cols=42 Identities=29% Similarity=0.342 Sum_probs=31.7
Q ss_pred CCCEEEE-eCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHH
Q 042455 23 AGVTAIV-TGASSGIGAETTRVLALRGVHVIMADRNMAAGRDV 64 (138)
Q Consensus 23 ~~k~~li-tG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~ 64 (138)
.+..++| +|+++++|...++.....|++|+++++++++.+.+
T Consensus 142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~ 184 (324)
T cd08291 142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL 184 (324)
T ss_pred CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 3444555 58999999999887777899999988887665443
No 472
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=96.48 E-value=0.058 Score=36.14 Aligned_cols=74 Identities=9% Similarity=0.086 Sum_probs=52.9
Q ss_pred HHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEEEECccc
Q 042455 38 AETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARALPLNILINKAGI 113 (138)
Q Consensus 38 ~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 113 (138)
..+.+...+.+.++++++-+++.++++...++..+|+.++.....-.-+.++.+++++.+.+. +.|+|+.+-|.
T Consensus 38 ~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~--~pdiv~vglG~ 111 (172)
T PF03808_consen 38 PDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINAS--GPDIVFVGLGA 111 (172)
T ss_pred HHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHc--CCCEEEEECCC
Confidence 345555555678888888888888888888888888776665443322677777777777653 67888887775
No 473
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=96.46 E-value=0.036 Score=41.37 Aligned_cols=78 Identities=18% Similarity=0.227 Sum_probs=48.1
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
.+++++|.|+ +++|...++.+...|+ +|+++++++++.+.+ .++ +... ..|..+.+..+. +.+...
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~~---~i~~~~~~~~~~-i~~~~~-- 257 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GATA---TVNAGDPNAVEQ-VRELTG-- 257 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCce---EeCCCchhHHHH-HHHHhC--
Confidence 4789999985 8999998887777898 688888877665433 222 3221 123333222222 222211
Q ss_pred CCccEEEECccc
Q 042455 102 LPLNILINKAGI 113 (138)
Q Consensus 102 ~~id~lv~~ag~ 113 (138)
+.+|++|.++|.
T Consensus 258 ~g~d~vid~~G~ 269 (371)
T cd08281 258 GGVDYAFEMAGS 269 (371)
T ss_pred CCCCEEEECCCC
Confidence 268999988863
No 474
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.46 E-value=0.064 Score=39.75 Aligned_cols=90 Identities=16% Similarity=0.064 Sum_probs=55.3
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHH-------HHhcCCCCeeEEEEecCCCHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVA-------IVMQNPAAKVDVMELDLSSLASVRKF 93 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~D~~~~~~~~~~ 93 (138)
.+.+|++.|+|. |.+|.++|+.|...|.+|++..+..++..+.... ..+.....++.++.+. ......+
T Consensus 14 ~L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVP---d~~~~~V 89 (330)
T PRK05479 14 LIKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLP---DEVQAEV 89 (330)
T ss_pred hhCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCC---HHHHHHH
Confidence 467899999987 5899999999999999998877764432222111 1111113344444443 2233566
Q ss_pred H-HHHHhcCCCccEEEECcccC
Q 042455 94 A-SDFTARALPLNILINKAGIC 114 (138)
Q Consensus 94 ~-~~~~~~~~~id~lv~~ag~~ 114 (138)
+ +++.....+=.+|++++|+.
T Consensus 90 ~~~~I~~~Lk~g~iL~~a~G~~ 111 (330)
T PRK05479 90 YEEEIEPNLKEGAALAFAHGFN 111 (330)
T ss_pred HHHHHHhcCCCCCEEEECCCCC
Confidence 5 55554443335778888875
No 475
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=96.45 E-value=0.046 Score=40.45 Aligned_cols=39 Identities=28% Similarity=0.362 Sum_probs=32.5
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGR 62 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~ 62 (138)
.+.+++|+| ++++|+++++.+...|+ +|+++++++++.+
T Consensus 177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~ 216 (361)
T cd08231 177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE 216 (361)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 678999997 58999999988888899 8998888766544
No 476
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.43 E-value=0.023 Score=42.12 Aligned_cols=40 Identities=25% Similarity=0.295 Sum_probs=32.3
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVH-VIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~ 63 (138)
.+++++|.|+ +++|.+.++.....|++ |+++++++++.+.
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~ 216 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEW 216 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 4789999985 89999998877788984 8888887766444
No 477
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=96.43 E-value=0.042 Score=40.05 Aligned_cols=41 Identities=17% Similarity=0.264 Sum_probs=33.6
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEecCcchhHHH
Q 042455 24 GVTAIVTGASSGIGAETTRVLALR-GVHVIMADRNMAAGRDV 64 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~ 64 (138)
+.+++|.|+++++|.++++..... |++|+.+.+++++.+.+
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l 190 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV 190 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence 789999999999999988766666 99999998877654443
No 478
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=96.42 E-value=0.026 Score=41.59 Aligned_cols=78 Identities=26% Similarity=0.324 Sum_probs=48.7
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
.+++++|.|+ +++|...++.+...|+ +|+++++++++.+.+ .++ +... ..|..+.+..+.+ .+.. ..
T Consensus 172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~-----ga~~---~i~~~~~~~~~~l-~~~~-~~ 239 (351)
T cd08233 172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL-----GATI---VLDPTEVDVVAEV-RKLT-GG 239 (351)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE---EECCCccCHHHHH-HHHh-CC
Confidence 5789999985 7999999998888999 788888877665433 222 2221 1233332222222 2211 11
Q ss_pred CCccEEEECcc
Q 042455 102 LPLNILINKAG 112 (138)
Q Consensus 102 ~~id~lv~~ag 112 (138)
..+|+++.++|
T Consensus 240 ~~~d~vid~~g 250 (351)
T cd08233 240 GGVDVSFDCAG 250 (351)
T ss_pred CCCCEEEECCC
Confidence 24899999887
No 479
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=96.41 E-value=0.022 Score=41.81 Aligned_cols=80 Identities=19% Similarity=0.261 Sum_probs=52.4
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCC--EEEEEecCcchhHHHHHHHHhcCCCC-eeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 26 TAIVTGASSGIGAETTRVLALRGV--HVIMADRNMAAGRDVKVAIVMQNPAA-KVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 26 ~~litG~~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
++.|+|+ |++|.+++..|+.++. .+++++.+++.++-...+|....+.. .-..+..| .+.+ .+.
T Consensus 2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~-----------~~~ 68 (313)
T COG0039 2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYE-----------DLK 68 (313)
T ss_pred eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChh-----------hhc
Confidence 5788999 9999999999988764 79999999777666666664332110 00111222 1111 223
Q ss_pred CccEEEECcccCCCCC
Q 042455 103 PLNILINKAGICGTPF 118 (138)
Q Consensus 103 ~id~lv~~ag~~~~~~ 118 (138)
.-|++|..||+.+.+.
T Consensus 69 ~aDiVvitAG~prKpG 84 (313)
T COG0039 69 GADIVVITAGVPRKPG 84 (313)
T ss_pred CCCEEEEeCCCCCCCC
Confidence 5799999999875433
No 480
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.40 E-value=0.049 Score=39.74 Aligned_cols=43 Identities=23% Similarity=0.353 Sum_probs=34.8
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHH
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAI 68 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l 68 (138)
+++.|+|+ |.+|..++..++..|. +|++++++++.++....++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl 46 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDI 46 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHH
Confidence 46888998 8999999999998875 9999999888765544443
No 481
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.39 E-value=0.014 Score=46.19 Aligned_cols=58 Identities=9% Similarity=0.165 Sum_probs=41.8
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHH
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVR 91 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~ 91 (138)
..++|.|. |.+|+.+++.|.++|.++++++.|+++.++..+ .....+.+|.+|++.++
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~--------~g~~~i~GD~~~~~~L~ 475 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE--------RGIRAVLGNAANEEIMQ 475 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------CCCeEEEcCCCCHHHHH
Confidence 34566665 799999999999999999999999877665432 12445666666655543
No 482
>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.
Probab=96.39 E-value=0.042 Score=42.19 Aligned_cols=80 Identities=21% Similarity=0.288 Sum_probs=54.1
Q ss_pred EEEeCCCCchHHHHHHHHHHCCC------EEEEEecCc-------------------chhHHHHHHHHhcCCCCeeEEEE
Q 042455 27 AIVTGASSGIGAETTRVLALRGV------HVIMADRNM-------------------AAGRDVKVAIVMQNPAAKVDVME 81 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~------~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 81 (138)
++|+|+ ||||.++++.|+..|. ++.+++.+. .+.+.+.+.+++..|..++..+.
T Consensus 2 VlvVGa-GGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~~ 80 (435)
T cd01490 2 VFLVGA-GAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITALQ 80 (435)
T ss_pred EEEECC-CHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence 678885 7999999999999987 788887631 24455566677777788888888
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCccEEEECc
Q 042455 82 LDLSSLASVRKFASDFTARALPLNILINKA 111 (138)
Q Consensus 82 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 111 (138)
..+... . +.++.. +.+..+|++|++.
T Consensus 81 ~~v~~~-~-~~~~~~--~f~~~~DvVi~al 106 (435)
T cd01490 81 NRVGPE-T-EHIFND--EFWEKLDGVANAL 106 (435)
T ss_pred cccChh-h-hhhhhH--HHhcCCCEEEECC
Confidence 777532 1 122221 1234678888774
No 483
>PLN02306 hydroxypyruvate reductase
Probab=96.38 E-value=0.041 Score=41.63 Aligned_cols=105 Identities=15% Similarity=0.071 Sum_probs=61.8
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHH-HCCCEEEEEecCcchh-HH--------------------HHHHHHhcCCCCee
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLA-LRGVHVIMADRNMAAG-RD--------------------VKVAIVMQNPAAKV 77 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~-~~g~~v~~~~r~~~~~-~~--------------------~~~~l~~~~~~~~~ 77 (138)
.++.||++.|.|. |.||+++|+.+. .-|++|+..++..... .. ....+.+......+
T Consensus 161 ~~L~gktvGIiG~-G~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDi 239 (386)
T PLN02306 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADV 239 (386)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCE
Confidence 4689999999988 699999999986 6799999988764321 10 00122222224567
Q ss_pred EEEEecCCCHHHHHHHHHH-HHhcCCCccEEEECcccCCCCCccCHHHHHHHhhh
Q 042455 78 DVMELDLSSLASVRKFASD-FTARALPLNILINKAGICGTPFMLSKDNIELHFAT 131 (138)
Q Consensus 78 ~~~~~D~~~~~~~~~~~~~-~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~ 131 (138)
..+.+.+++. -..++.. ..+.+ +.+.++.|.|... -.+.+.+.+.++.
T Consensus 240 V~lh~Plt~~--T~~lin~~~l~~M-K~ga~lIN~aRG~---lVDe~AL~~AL~s 288 (386)
T PLN02306 240 ISLHPVLDKT--TYHLINKERLALM-KKEAVLVNASRGP---VIDEVALVEHLKA 288 (386)
T ss_pred EEEeCCCChh--hhhhcCHHHHHhC-CCCeEEEECCCcc---ccCHHHHHHHHHh
Confidence 7777777642 3334432 22233 4566666666532 2344444444443
No 484
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=96.38 E-value=0.041 Score=41.46 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=33.3
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGR 62 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~ 62 (138)
.+.+++|.|+++++|.++++.+...|++++++.++.++.+
T Consensus 189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~ 228 (398)
T TIGR01751 189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE 228 (398)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence 4689999999999999999888888999888877665433
No 485
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.37 E-value=0.045 Score=40.16 Aligned_cols=36 Identities=39% Similarity=0.550 Sum_probs=31.4
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNM 58 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~ 58 (138)
.+.+++|.|+++++|.++++.....|+++++++++.
T Consensus 177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~ 212 (350)
T cd08274 177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA 212 (350)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence 578999999999999999988888899988887653
No 486
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=96.36 E-value=0.065 Score=39.34 Aligned_cols=41 Identities=22% Similarity=0.260 Sum_probs=34.2
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDV 64 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~ 64 (138)
.+++++|.| ++++|+++++.+...|.+|+++.++.++.+.+
T Consensus 165 ~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~ 205 (345)
T cd08260 165 PGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELA 205 (345)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 478999999 68999999998888899999998887665443
No 487
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.36 E-value=0.014 Score=34.84 Aligned_cols=41 Identities=17% Similarity=0.260 Sum_probs=32.5
Q ss_pred EEEeCCCCchHHHHHHHHHHCC---CEEEEE-ecCcchhHHHHHHH
Q 042455 27 AIVTGASSGIGAETTRVLALRG---VHVIMA-DRNMAAGRDVKVAI 68 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g---~~v~~~-~r~~~~~~~~~~~l 68 (138)
+.|. |+|.+|.++++.|++.| .+|.++ .|++++.++...+.
T Consensus 2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 3445 56899999999999999 789865 99988877766543
No 488
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=96.35 E-value=0.044 Score=40.80 Aligned_cols=78 Identities=17% Similarity=0.184 Sum_probs=48.1
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCH-HHHHHHHHHHHhc
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGV-HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSL-ASVRKFASDFTAR 100 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~ 100 (138)
.+.+++|.|+ +++|...++.....|+ +|+++++++++.+.+ .++ +... + .|..+. ..+...+.+...
T Consensus 184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~-----ga~~-~--i~~~~~~~~~~~~~~~~~~- 252 (365)
T cd08277 184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEF-----GATD-F--INPKDSDKPVSEVIREMTG- 252 (365)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCc-E--eccccccchHHHHHHHHhC-
Confidence 5789999975 8999999887778898 688888877665443 222 2211 1 122211 122233333322
Q ss_pred CCCccEEEECcc
Q 042455 101 ALPLNILINKAG 112 (138)
Q Consensus 101 ~~~id~lv~~ag 112 (138)
+.+|++|.++|
T Consensus 253 -~g~d~vid~~g 263 (365)
T cd08277 253 -GGVDYSFECTG 263 (365)
T ss_pred -CCCCEEEECCC
Confidence 46899998877
No 489
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=96.35 E-value=0.039 Score=39.89 Aligned_cols=40 Identities=25% Similarity=0.346 Sum_probs=33.7
Q ss_pred CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 24 GVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 24 ~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
+.+++|.|+++++|.++++.....|++|+++++++++.+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 186 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADY 186 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 4589999999999999998777889999999888766443
No 490
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=96.35 E-value=0.049 Score=39.90 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=33.7
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+++++|.| ++++|.++++.+...|++|+++++++++.+.
T Consensus 163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~ 202 (333)
T cd08296 163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADL 202 (333)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 578999999 7999999998888889999999888666443
No 491
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=96.35 E-value=0.057 Score=39.90 Aligned_cols=106 Identities=10% Similarity=0.062 Sum_probs=63.5
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHH-HCCCEEEEEecCcchhH--HH---HHHHHhcCCCCeeEEEEecCCCHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLA-LRGVHVIMADRNMAAGR--DV---KVAIVMQNPAAKVDVMELDLSSLASVRKF 93 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~-~~g~~v~~~~r~~~~~~--~~---~~~l~~~~~~~~~~~~~~D~~~~~~~~~~ 93 (138)
.++.||++.|.|- |.||+++++.+. .-|++|+..++...... .. ...+.+......+..+.+.++.. -+.+
T Consensus 141 ~~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~--T~~l 217 (323)
T PRK15409 141 TDVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDE--THHL 217 (323)
T ss_pred CCCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChH--Hhhc
Confidence 4689999999998 799999999987 77999988877532211 10 01122222246788888887643 3334
Q ss_pred HHH-HHhcCCCccEEEECcccCCCCCccCHHHHHHHhhhc
Q 042455 94 ASD-FTARALPLNILINKAGICGTPFMLSKDNIELHFATN 132 (138)
Q Consensus 94 ~~~-~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n 132 (138)
+.. ..+.+ +.+.++.|.|... -.+++.+.+.++.+
T Consensus 218 i~~~~l~~m-k~ga~lIN~aRG~---vVde~AL~~AL~~g 253 (323)
T PRK15409 218 FGAEQFAKM-KSSAIFINAGRGP---VVDENALIAALQKG 253 (323)
T ss_pred cCHHHHhcC-CCCeEEEECCCcc---ccCHHHHHHHHHcC
Confidence 422 23333 4577777777532 23445554444433
No 492
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.35 E-value=0.11 Score=38.14 Aligned_cols=74 Identities=14% Similarity=0.187 Sum_probs=52.3
Q ss_pred EEEeCCCCchHHHHHHHHHHCCC--EEEEEecCcchhHHHHHHHHhcCC--C-CeeEEEEecCCCHHHHHHHHHHHHhcC
Q 042455 27 AIVTGASSGIGAETTRVLALRGV--HVIMADRNMAAGRDVKVAIVMQNP--A-AKVDVMELDLSSLASVRKFASDFTARA 101 (138)
Q Consensus 27 ~litG~~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 101 (138)
+.|.|+ |.+|..+|..|+..+. ++++++.+++.++....+|....+ . ..+..... +.+. +
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y~~-------~---- 66 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DYDD-------C---- 66 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CHHH-------h----
Confidence 578898 8999999999998875 799999998888777777764321 1 12333322 3222 2
Q ss_pred CCccEEEECcccCC
Q 042455 102 LPLNILINKAGICG 115 (138)
Q Consensus 102 ~~id~lv~~ag~~~ 115 (138)
..-|++|..||...
T Consensus 67 ~~aDivvitaG~~~ 80 (307)
T cd05290 67 ADADIIVITAGPSI 80 (307)
T ss_pred CCCCEEEECCCCCC
Confidence 35799999999864
No 493
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=96.35 E-value=0.047 Score=39.82 Aligned_cols=41 Identities=29% Similarity=0.441 Sum_probs=35.3
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|.|+++.+|+++++.+...|++++.++++.++.+.
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~ 202 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKI 202 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 47799999999999999999888899999888887766544
No 494
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.34 E-value=0.091 Score=38.87 Aligned_cols=90 Identities=19% Similarity=0.131 Sum_probs=57.8
Q ss_pred CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHH------HHHhcCCCCeeEEEEecCCCHHHHHHHH
Q 042455 21 DAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKV------AIVMQNPAAKVDVMELDLSSLASVRKFA 94 (138)
Q Consensus 21 ~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~------~l~~~~~~~~~~~~~~D~~~~~~~~~~~ 94 (138)
.+.+|++.|+|- |.+|.++|+.|...|++|++..|.....+.... .+.+.....++..+.+. +.+. ..++
T Consensus 13 ~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLP--d~~t-~~V~ 88 (335)
T PRK13403 13 LLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLP--DEQQ-AHVY 88 (335)
T ss_pred hhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCC--ChHH-HHHH
Confidence 478999999988 799999999999999999887665322211110 12222223455555554 2333 4555
Q ss_pred -HHHHhcCCCccEEEECcccC
Q 042455 95 -SDFTARALPLNILINKAGIC 114 (138)
Q Consensus 95 -~~~~~~~~~id~lv~~ag~~ 114 (138)
+++...+.+=.+|+..-|..
T Consensus 89 ~~eil~~MK~GaiL~f~hgfn 109 (335)
T PRK13403 89 KAEVEENLREGQMLLFSHGFN 109 (335)
T ss_pred HHHHHhcCCCCCEEEECCCcc
Confidence 34666665667888888865
No 495
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=96.32 E-value=0.029 Score=40.82 Aligned_cols=41 Identities=12% Similarity=0.142 Sum_probs=34.4
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHH
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRD 63 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~ 63 (138)
.+.+++|.|+++.+|.++++.....|++++.+.+++++.+.
T Consensus 140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~ 180 (327)
T PRK10754 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQR 180 (327)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 57899999999999999988887889999888877665443
No 496
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.32 E-value=0.18 Score=36.52 Aligned_cols=40 Identities=25% Similarity=0.270 Sum_probs=33.5
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHH
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVK 65 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~ 65 (138)
+++.|.|+ |.+|.++|..|+..|.+|.+++++++..+...
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~ 43 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAK 43 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 46778876 79999999999999999999999987655543
No 497
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.32 E-value=0.021 Score=41.42 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=34.8
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCc
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNM 58 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~ 58 (138)
.+++||.++|.|.+.-+|+.++..|.++|+.|.++....
T Consensus 153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t 191 (285)
T PRK14191 153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT 191 (285)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999999999999999998876543
No 498
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=96.30 E-value=0.013 Score=39.59 Aligned_cols=79 Identities=18% Similarity=0.175 Sum_probs=56.3
Q ss_pred CCCCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHH
Q 042455 20 IDAAGVTAIVTGASSGIGAETTRVLALRGV--HVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDF 97 (138)
Q Consensus 20 ~~~~~k~~litG~~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 97 (138)
+.|.++.++|.||+|-.|..+.+++++.+- +|+++.|.+....+ . ...+.....|++..++. ..
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a-t--------~k~v~q~~vDf~Kl~~~---a~-- 79 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA-T--------DKVVAQVEVDFSKLSQL---AT-- 79 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc-c--------cceeeeEEechHHHHHH---Hh--
Confidence 557788999999999999999999999873 79999887532111 1 34455566676544443 22
Q ss_pred HhcCCCccEEEECcccC
Q 042455 98 TARALPLNILINKAGIC 114 (138)
Q Consensus 98 ~~~~~~id~lv~~ag~~ 114 (138)
....+|+++.+-|-.
T Consensus 80 --~~qg~dV~FcaLgTT 94 (238)
T KOG4039|consen 80 --NEQGPDVLFCALGTT 94 (238)
T ss_pred --hhcCCceEEEeeccc
Confidence 334789999998865
No 499
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=96.28 E-value=0.071 Score=40.11 Aligned_cols=74 Identities=18% Similarity=0.208 Sum_probs=51.0
Q ss_pred CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEecCcchhHHHHHHHHhcCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 042455 23 AGVTAIVTGASSGIGAETTRVLALRGVHVIMADRNMAAGRDVKVAIVMQNPAAKVDVMELDLSSLASVRKFASDFTARAL 102 (138)
Q Consensus 23 ~~k~~litG~~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 102 (138)
..|+++|+|++ .+|..+++.+.+.|+++++++.++...... + .. ..+..|..|.+.+.+++++ .
T Consensus 11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~-----ad--~~~~~~~~d~~~l~~~~~~-----~ 74 (395)
T PRK09288 11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---V-----AH--RSHVIDMLDGDALRAVIER-----E 74 (395)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---h-----hh--heEECCCCCHHHHHHHHHH-----h
Confidence 56689999875 688999999889999999998876432211 1 01 1356677788777766654 2
Q ss_pred CccEEEECcc
Q 042455 103 PLNILINKAG 112 (138)
Q Consensus 103 ~id~lv~~ag 112 (138)
++|.++....
T Consensus 75 ~id~vi~~~e 84 (395)
T PRK09288 75 KPDYIVPEIE 84 (395)
T ss_pred CCCEEEEeeC
Confidence 5788876543
No 500
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.27 E-value=0.0086 Score=44.18 Aligned_cols=77 Identities=16% Similarity=0.041 Sum_probs=49.7
Q ss_pred CEEEEeCCCCchHHHHHHHHHHCCC-------EEEEEecCcch--hHHHHHHHHhcC-CC-CeeEEEEecCCCHHHHHHH
Q 042455 25 VTAIVTGASSGIGAETTRVLALRGV-------HVIMADRNMAA--GRDVKVAIVMQN-PA-AKVDVMELDLSSLASVRKF 93 (138)
Q Consensus 25 k~~litG~~~~iG~~~a~~l~~~g~-------~v~~~~r~~~~--~~~~~~~l~~~~-~~-~~~~~~~~D~~~~~~~~~~ 93 (138)
+++.|+|++|.+|..++..|+..|. .+++++.++.. ++....++.... +- ..+.. . -.+.
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~--~~~~------ 73 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T--DDPN------ 73 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e--cCcH------
Confidence 4789999999999999999998774 69999995443 555555554321 10 11111 1 1111
Q ss_pred HHHHHhcCCCccEEEECcccCC
Q 042455 94 ASDFTARALPLNILINKAGICG 115 (138)
Q Consensus 94 ~~~~~~~~~~id~lv~~ag~~~ 115 (138)
+.+..-|++|..||...
T Consensus 74 -----~~~~daDivvitaG~~~ 90 (322)
T cd01338 74 -----VAFKDADWALLVGAKPR 90 (322)
T ss_pred -----HHhCCCCEEEEeCCCCC
Confidence 12245799999999864
Done!