Query 042457
Match_columns 361
No_of_seqs 361 out of 2939
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 06:22:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042457.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042457hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 7.3E-56 1.6E-60 401.9 24.2 272 75-352 61-347 (361)
2 KOG0581 Mitogen-activated prot 100.0 1.2E-55 2.5E-60 380.3 18.4 257 90-359 80-341 (364)
3 KOG0575 Polo-like serine/threo 100.0 1.8E-54 3.9E-59 393.5 20.3 256 89-359 18-275 (592)
4 KOG0615 Serine/threonine prote 100.0 1.1E-54 2.4E-59 377.3 14.0 262 87-359 170-443 (475)
5 KOG0192 Tyrosine kinase specif 100.0 1.2E-53 2.6E-58 384.7 20.7 252 88-352 40-298 (362)
6 KOG0197 Tyrosine kinases [Sign 100.0 8.8E-53 1.9E-57 378.4 15.0 254 82-351 199-455 (468)
7 KOG0595 Serine/threonine-prote 100.0 1.1E-51 2.5E-56 358.7 18.4 259 88-359 9-274 (429)
8 KOG0598 Ribosomal protein S6 k 100.0 4.3E-51 9.2E-56 351.9 18.0 257 87-358 23-286 (357)
9 KOG0593 Predicted protein kina 100.0 9.7E-52 2.1E-56 345.8 13.3 263 89-357 2-288 (396)
10 KOG1026 Nerve growth factor re 100.0 1.3E-50 2.8E-55 381.6 17.7 257 82-351 479-756 (774)
11 KOG0578 p21-activated serine/t 100.0 1E-50 2.2E-55 366.2 15.8 256 88-358 272-528 (550)
12 KOG0591 NIMA (never in mitosis 100.0 1.7E-51 3.6E-56 341.1 7.8 251 90-347 20-275 (375)
13 KOG0198 MEKK and related serin 100.0 4.3E-50 9.3E-55 351.2 16.2 259 88-359 16-282 (313)
14 KOG0583 Serine/threonine prote 100.0 3.1E-49 6.7E-54 359.3 21.4 259 86-358 14-280 (370)
15 KOG0661 MAPK related serine/th 100.0 1.9E-50 4.1E-55 356.6 11.6 265 86-358 7-296 (538)
16 KOG0582 Ste20-like serine/thre 100.0 5E-49 1.1E-53 345.2 19.8 265 86-358 23-298 (516)
17 KOG0592 3-phosphoinositide-dep 100.0 2.7E-49 5.9E-54 354.5 17.3 258 86-358 70-343 (604)
18 KOG0600 Cdc2-related protein k 100.0 5E-49 1.1E-53 350.0 16.4 267 88-360 116-407 (560)
19 KOG0659 Cdk activating kinase 100.0 8E-49 1.7E-53 322.7 16.3 264 89-358 2-286 (318)
20 KOG0193 Serine/threonine prote 100.0 4.6E-49 9.9E-54 357.1 14.3 263 78-352 381-648 (678)
21 KOG0616 cAMP-dependent protein 100.0 6.2E-48 1.4E-52 322.0 19.0 252 89-358 44-302 (355)
22 cd05571 STKc_PKB Catalytic dom 100.0 1.2E-47 2.6E-52 348.3 20.5 249 95-358 1-256 (323)
23 KOG0605 NDR and related serine 100.0 8.4E-48 1.8E-52 344.9 18.8 259 86-358 138-450 (550)
24 KOG0597 Serine-threonine prote 100.0 1.1E-48 2.3E-53 351.6 12.7 255 89-359 2-257 (808)
25 KOG0196 Tyrosine kinase, EPH ( 100.0 1.9E-49 4.1E-54 368.0 8.1 251 89-353 629-887 (996)
26 cd05631 STKc_GRK4 Catalytic do 100.0 2.8E-47 6.1E-52 340.0 21.6 258 90-358 1-266 (285)
27 KOG0663 Protein kinase PITSLRE 100.0 8E-48 1.7E-52 326.2 15.6 266 89-360 76-368 (419)
28 cd05612 STKc_PRKX_like Catalyt 100.0 2E-47 4.4E-52 341.9 19.2 252 89-358 1-259 (291)
29 PTZ00263 protein kinase A cata 100.0 2.7E-47 5.9E-52 346.8 19.7 252 89-358 18-276 (329)
30 cd05585 STKc_YPK1_like Catalyt 100.0 3.7E-47 8E-52 343.5 20.4 247 97-358 1-252 (312)
31 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.3E-47 7.1E-52 340.1 19.0 261 89-356 5-288 (288)
32 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.7E-47 1.4E-51 340.6 21.0 265 88-359 4-294 (303)
33 PLN00034 mitogen-activated pro 100.0 9.1E-47 2E-51 346.7 22.1 254 90-359 75-334 (353)
34 cd07848 STKc_CDKL5 Catalytic d 100.0 3.1E-47 6.7E-52 340.1 18.4 262 89-356 1-287 (287)
35 PTZ00426 cAMP-dependent protei 100.0 5.9E-47 1.3E-51 345.5 19.6 253 88-358 29-289 (340)
36 cd06649 PKc_MEK2 Catalytic dom 100.0 1.3E-46 2.8E-51 342.7 21.5 260 88-359 4-307 (331)
37 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.6E-47 7.9E-52 346.7 17.8 259 89-359 1-263 (333)
38 KOG0588 Serine/threonine prote 100.0 2.7E-47 5.8E-52 348.6 16.5 253 90-358 13-268 (786)
39 cd05593 STKc_PKB_gamma Catalyt 100.0 1.7E-46 3.6E-51 341.3 21.5 249 95-358 1-256 (328)
40 cd05595 STKc_PKB_beta Catalyti 100.0 1.5E-46 3.3E-51 340.9 21.2 249 95-358 1-256 (323)
41 KOG1095 Protein tyrosine kinas 100.0 3.6E-47 7.8E-52 370.5 18.0 254 87-352 690-956 (1025)
42 KOG4721 Serine/threonine prote 100.0 2E-48 4.2E-53 350.0 8.4 240 91-356 126-367 (904)
43 KOG0201 Serine/threonine prote 100.0 2.1E-48 4.5E-53 340.9 7.7 256 88-358 12-268 (467)
44 KOG0580 Serine/threonine prote 100.0 1.2E-47 2.6E-52 311.4 10.9 257 88-359 21-279 (281)
45 cd07862 STKc_CDK6 Catalytic do 100.0 1.4E-46 2.9E-51 336.4 18.9 262 89-356 1-290 (290)
46 cd05584 STKc_p70S6K Catalytic 100.0 3.4E-46 7.4E-51 338.8 21.3 249 95-358 2-261 (323)
47 cd05573 STKc_ROCK_NDR_like Cat 100.0 6E-47 1.3E-51 347.8 16.5 256 89-358 1-290 (350)
48 cd05618 STKc_aPKC_iota Catalyt 100.0 4.3E-46 9.3E-51 338.8 21.7 252 95-358 1-267 (329)
49 cd05588 STKc_aPKC Catalytic do 100.0 4.8E-46 1E-50 338.6 21.9 252 95-358 1-267 (329)
50 cd05614 STKc_MSK2_N N-terminal 100.0 3.8E-46 8.3E-51 339.9 21.1 257 90-358 1-272 (332)
51 cd05590 STKc_nPKC_eta Catalyti 100.0 3.5E-46 7.5E-51 338.2 20.7 249 95-358 1-258 (320)
52 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1E-46 2.2E-51 344.6 17.0 261 90-358 1-295 (338)
53 cd05589 STKc_PKN Catalytic dom 100.0 4.6E-46 9.9E-51 338.2 21.2 252 91-358 1-262 (324)
54 cd05587 STKc_cPKC Catalytic do 100.0 6.2E-46 1.3E-50 337.3 21.9 254 90-358 1-262 (324)
55 cd06650 PKc_MEK1 Catalytic dom 100.0 3E-46 6.5E-51 340.4 19.6 262 87-359 3-305 (333)
56 cd05582 STKc_RSK_N N-terminal 100.0 1.4E-46 3.1E-51 340.7 17.2 249 95-358 2-259 (318)
57 cd05594 STKc_PKB_alpha Catalyt 100.0 2.6E-46 5.6E-51 339.9 18.7 249 95-358 1-257 (325)
58 cd05608 STKc_GRK1 Catalytic do 100.0 6.5E-46 1.4E-50 330.3 20.9 253 97-358 1-262 (280)
59 cd05591 STKc_nPKC_epsilon Cata 100.0 5.2E-46 1.1E-50 337.4 20.1 249 95-358 1-259 (321)
60 cd05628 STKc_NDR1 Catalytic do 100.0 6.2E-46 1.3E-50 342.4 20.7 257 89-358 1-298 (363)
61 KOG1094 Discoidin domain recep 100.0 2.3E-46 5E-51 337.6 16.9 261 86-352 535-799 (807)
62 KOG0194 Protein tyrosine kinas 100.0 4.3E-47 9.4E-52 346.8 12.4 260 81-352 149-415 (474)
63 cd05599 STKc_NDR_like Catalyti 100.0 4E-46 8.8E-51 344.0 18.5 256 89-358 1-301 (364)
64 cd05626 STKc_LATS2 Catalytic d 100.0 8.4E-46 1.8E-50 343.6 20.7 256 90-358 2-310 (381)
65 KOG0694 Serine/threonine prote 100.0 9.2E-46 2E-50 340.6 20.3 257 86-358 365-629 (694)
66 cd05570 STKc_PKC Catalytic dom 100.0 1.3E-45 2.8E-50 334.2 21.0 249 95-358 1-257 (318)
67 cd05592 STKc_nPKC_theta_delta 100.0 1.7E-45 3.8E-50 333.0 21.6 249 95-358 1-253 (316)
68 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.1E-45 2.3E-50 337.9 20.0 257 85-352 3-329 (338)
69 cd05616 STKc_cPKC_beta Catalyt 100.0 1.9E-45 4.1E-50 334.0 21.4 254 90-358 1-262 (323)
70 KOG3653 Transforming growth fa 100.0 5.4E-46 1.2E-50 328.2 17.0 252 88-349 209-495 (534)
71 cd05596 STKc_ROCK Catalytic do 100.0 6E-46 1.3E-50 342.8 18.2 261 86-358 40-309 (370)
72 cd05620 STKc_nPKC_delta Cataly 100.0 2E-45 4.3E-50 332.7 21.1 249 95-358 1-253 (316)
73 cd05605 STKc_GRK4_like Catalyt 100.0 2.1E-45 4.6E-50 327.9 20.9 258 90-358 1-266 (285)
74 PHA03212 serine/threonine kina 100.0 2.2E-45 4.7E-50 340.7 21.8 256 88-358 91-381 (391)
75 cd05619 STKc_nPKC_theta Cataly 100.0 2.8E-45 6E-50 331.6 21.7 249 95-358 1-253 (316)
76 PF00069 Pkinase: Protein kina 100.0 2.9E-46 6.2E-51 328.7 14.8 258 91-356 1-260 (260)
77 cd05625 STKc_LATS1 Catalytic d 100.0 1.3E-45 2.9E-50 342.6 19.3 255 90-358 2-310 (382)
78 cd05575 STKc_SGK Catalytic dom 100.0 2.7E-45 5.8E-50 333.0 20.8 249 95-358 1-256 (323)
79 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.2E-45 4.8E-50 333.9 20.1 252 95-358 1-265 (327)
80 cd07861 STKc_CDK1_euk Catalyti 100.0 2.6E-45 5.7E-50 327.2 20.2 263 90-356 1-285 (285)
81 cd08529 STKc_FA2-like Catalyti 100.0 6.4E-45 1.4E-49 319.5 22.4 255 90-356 1-256 (256)
82 cd05601 STKc_CRIK Catalytic do 100.0 6.5E-46 1.4E-50 338.1 16.1 257 89-358 1-268 (330)
83 cd05621 STKc_ROCK2 Catalytic d 100.0 1.7E-45 3.7E-50 339.5 19.0 263 84-358 38-309 (370)
84 cd05629 STKc_NDR_like_fungal C 100.0 1.6E-45 3.4E-50 341.5 18.7 256 89-358 1-310 (377)
85 cd05598 STKc_LATS Catalytic do 100.0 9.6E-46 2.1E-50 342.9 17.3 256 89-358 1-306 (376)
86 cd06624 STKc_ASK Catalytic dom 100.0 6.7E-45 1.5E-49 321.8 21.9 262 84-356 3-268 (268)
87 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.2E-45 4.7E-50 331.7 18.7 263 89-358 6-291 (309)
88 KOG0594 Protein kinase PCTAIRE 100.0 1.3E-45 2.8E-50 317.7 16.1 267 89-359 11-308 (323)
89 KOG0033 Ca2+/calmodulin-depend 100.0 1.8E-47 3.9E-52 311.3 4.1 260 87-358 9-272 (355)
90 cd06612 STKc_MST1_2 Catalytic 100.0 5.3E-45 1.1E-49 320.0 19.7 254 88-356 2-256 (256)
91 KOG0599 Phosphorylase kinase g 100.0 2E-46 4.2E-51 309.8 9.7 259 88-358 16-288 (411)
92 cd05615 STKc_cPKC_alpha Cataly 100.0 6.9E-45 1.5E-49 330.1 20.8 254 90-358 1-262 (323)
93 cd06637 STKc_TNIK Catalytic do 100.0 4.8E-45 1E-49 323.3 19.2 257 86-356 3-272 (272)
94 KOG0660 Mitogen-activated prot 100.0 6.6E-46 1.4E-50 318.7 13.1 265 87-358 20-315 (359)
95 cd06619 PKc_MKK5 Catalytic dom 100.0 1.2E-44 2.7E-49 322.0 21.7 253 89-358 1-258 (279)
96 KOG0611 Predicted serine/threo 100.0 8.3E-46 1.8E-50 321.3 13.6 253 88-357 52-307 (668)
97 cd07853 STKc_NLK Catalytic dom 100.0 3E-45 6.4E-50 339.0 18.1 262 90-358 1-293 (372)
98 cd06654 STKc_PAK1 Catalytic do 100.0 1.1E-44 2.4E-49 325.0 20.8 256 88-358 19-275 (296)
99 cd06656 STKc_PAK3 Catalytic do 100.0 1.2E-44 2.6E-49 325.0 20.9 256 88-358 18-274 (297)
100 cd05604 STKc_SGK3 Catalytic do 100.0 8.3E-45 1.8E-49 330.0 19.9 249 95-358 1-256 (325)
101 cd05630 STKc_GRK6 Catalytic do 100.0 1.4E-44 3E-49 322.6 20.9 259 90-358 1-266 (285)
102 cd06643 STKc_SLK Catalytic dom 100.0 1.6E-44 3.5E-49 321.7 21.1 255 91-358 7-267 (282)
103 KOG0032 Ca2+/calmodulin-depend 100.0 1.6E-44 3.5E-49 328.2 21.4 260 87-359 33-299 (382)
104 KOG0589 Serine/threonine prote 100.0 5.7E-46 1.2E-50 333.3 11.7 257 89-358 4-263 (426)
105 KOG2052 Activin A type IB rece 100.0 1.2E-44 2.5E-49 317.6 19.5 257 83-349 205-495 (513)
106 cd06631 STKc_YSK4 Catalytic do 100.0 3.3E-44 7.2E-49 316.8 22.5 255 90-356 1-265 (265)
107 cd07876 STKc_JNK2 Catalytic do 100.0 8.4E-45 1.8E-49 334.5 19.4 262 87-358 19-320 (359)
108 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.1E-44 2.4E-49 323.3 19.6 262 89-356 1-286 (286)
109 cd06625 STKc_MEKK3_like Cataly 100.0 3.3E-44 7.2E-49 316.3 22.2 255 89-356 2-263 (263)
110 cd05603 STKc_SGK2 Catalytic do 100.0 1.8E-44 3.9E-49 327.3 21.1 249 95-358 1-256 (321)
111 PTZ00283 serine/threonine prot 100.0 7.6E-45 1.7E-49 346.2 19.5 262 85-358 28-302 (496)
112 cd08223 STKc_Nek4 Catalytic do 100.0 4.2E-44 9.2E-49 314.6 22.7 255 90-356 1-257 (257)
113 cd05627 STKc_NDR2 Catalytic do 100.0 4.3E-45 9.3E-50 336.5 17.2 256 89-358 1-298 (360)
114 KOG0585 Ca2+/calmodulin-depend 100.0 5.4E-45 1.2E-49 321.9 16.9 260 87-359 95-378 (576)
115 PHA02988 hypothetical protein; 100.0 2.5E-44 5.4E-49 320.4 21.4 242 95-352 26-274 (283)
116 cd06655 STKc_PAK2 Catalytic do 100.0 1.5E-44 3.1E-49 324.2 19.8 255 89-358 19-274 (296)
117 PTZ00036 glycogen synthase kin 100.0 1.2E-44 2.6E-49 340.8 19.8 261 87-358 64-356 (440)
118 cd06644 STKc_STK10_LOK Catalyt 100.0 3.4E-44 7.3E-49 321.3 21.8 259 87-358 10-274 (292)
119 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.9E-44 1.1E-48 315.8 22.2 261 89-356 1-267 (267)
120 cd05602 STKc_SGK1 Catalytic do 100.0 2.5E-44 5.5E-49 326.8 20.8 249 95-358 1-256 (325)
121 cd05622 STKc_ROCK1 Catalytic d 100.0 1.3E-44 2.8E-49 333.9 19.2 267 81-359 35-310 (371)
122 cd08227 PK_STRAD_alpha Pseudok 100.0 2.3E-44 4.9E-49 327.5 20.3 259 93-358 2-312 (327)
123 cd06611 STKc_SLK_like Catalyti 100.0 1.6E-44 3.5E-49 321.4 18.9 259 88-359 4-268 (280)
124 cd07874 STKc_JNK3 Catalytic do 100.0 1.1E-44 2.3E-49 333.4 18.2 263 86-358 14-316 (355)
125 PTZ00267 NIMA-related protein 100.0 2.1E-44 4.6E-49 342.8 20.9 255 90-358 68-328 (478)
126 cd05607 STKc_GRK7 Catalytic do 100.0 5.4E-44 1.2E-48 317.5 22.1 252 97-358 1-259 (277)
127 cd08218 STKc_Nek1 Catalytic do 100.0 4.8E-44 1E-48 314.1 21.3 255 90-356 1-256 (256)
128 cd07875 STKc_JNK1 Catalytic do 100.0 1.7E-44 3.8E-49 333.0 19.2 262 87-358 22-323 (364)
129 cd06609 STKc_MST3_like Catalyt 100.0 3.4E-44 7.4E-49 318.3 20.3 256 89-359 1-257 (274)
130 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.2E-44 4.8E-49 323.8 19.0 263 89-358 6-291 (301)
131 cd07863 STKc_CDK4 Catalytic do 100.0 1.8E-44 3.9E-49 322.4 18.3 261 90-356 1-288 (288)
132 cd06639 STKc_myosinIIIB Cataly 100.0 3.1E-44 6.6E-49 321.4 19.6 267 79-357 12-291 (291)
133 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.6E-44 1E-48 319.4 20.7 260 89-358 1-267 (286)
134 cd06646 STKc_MAP4K5 Catalytic 100.0 6.6E-44 1.4E-48 315.2 21.2 256 88-355 8-267 (267)
135 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.3E-44 5E-49 329.6 18.6 262 86-358 12-303 (343)
136 cd05597 STKc_DMPK_like Catalyt 100.0 4.9E-44 1.1E-48 325.7 20.4 259 89-358 1-271 (331)
137 cd05096 PTKc_DDR1 Catalytic do 100.0 4.2E-44 9.1E-49 322.5 19.5 259 88-352 4-300 (304)
138 KOG0610 Putative serine/threon 100.0 5.6E-44 1.2E-48 310.9 19.3 260 88-358 76-397 (459)
139 PTZ00284 protein kinase; Provi 100.0 1.3E-44 2.9E-49 344.0 16.8 264 82-358 122-443 (467)
140 PLN00113 leucine-rich repeat r 100.0 4.1E-43 8.9E-48 361.7 29.1 246 89-353 690-947 (968)
141 cd06615 PKc_MEK Catalytic doma 100.0 1.2E-43 2.6E-48 320.1 22.0 258 89-358 1-292 (308)
142 KOG0667 Dual-specificity tyros 100.0 5.9E-45 1.3E-49 334.8 13.7 258 90-358 187-507 (586)
143 cd05632 STKc_GRK5 Catalytic do 100.0 1E-43 2.2E-48 317.1 21.1 257 91-358 2-266 (285)
144 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.1E-44 4.5E-49 321.6 16.7 262 89-356 1-286 (286)
145 cd06636 STKc_MAP4K4_6 Catalyti 100.0 8.3E-44 1.8E-48 317.1 20.5 264 79-356 6-282 (282)
146 cd06638 STKc_myosinIIIA Cataly 100.0 4.3E-44 9.2E-49 319.6 18.6 266 79-356 8-286 (286)
147 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.2E-43 2.6E-48 313.5 21.2 253 90-356 1-267 (267)
148 PHA03207 serine/threonine kina 100.0 4.2E-44 9.1E-49 333.2 19.1 259 87-359 90-381 (392)
149 cd06658 STKc_PAK5 Catalytic do 100.0 2.9E-44 6.3E-49 321.6 17.0 253 91-358 24-277 (292)
150 cd05104 PTKc_Kit Catalytic dom 100.0 5.8E-44 1.3E-48 330.2 19.6 260 83-353 29-370 (375)
151 PHA03209 serine/threonine kina 100.0 7.4E-44 1.6E-48 327.6 20.1 258 86-358 63-356 (357)
152 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.3E-44 1.4E-48 315.2 18.9 252 87-352 3-260 (266)
153 cd06651 STKc_MEKK3 Catalytic d 100.0 1.9E-43 4E-48 312.2 21.9 256 89-358 2-266 (266)
154 PF07714 Pkinase_Tyr: Protein 100.0 1.9E-44 4.2E-49 317.2 15.5 246 93-352 3-257 (259)
155 cd06645 STKc_MAP4K3 Catalytic 100.0 6.5E-44 1.4E-48 315.3 18.9 256 88-355 8-267 (267)
156 cd06623 PKc_MAPKK_plant_like C 100.0 2.1E-43 4.5E-48 311.2 22.0 259 89-358 1-261 (264)
157 cd08221 STKc_Nek9 Catalytic do 100.0 4.1E-43 8.9E-48 308.1 23.3 255 90-356 1-256 (256)
158 cd05586 STKc_Sck1_like Catalyt 100.0 2.6E-44 5.6E-49 327.5 16.2 248 97-358 1-258 (330)
159 cd05580 STKc_PKA Catalytic dom 100.0 2E-43 4.4E-48 316.0 21.6 253 89-359 1-260 (290)
160 cd07841 STKc_CDK7 Catalytic do 100.0 1.1E-43 2.4E-48 318.9 20.0 265 90-360 1-289 (298)
161 cd07860 STKc_CDK2_3 Catalytic 100.0 8.1E-44 1.8E-48 317.5 18.8 262 90-356 1-284 (284)
162 cd06613 STKc_MAP4K3_like Catal 100.0 3.5E-43 7.6E-48 309.5 22.6 257 88-355 2-262 (262)
163 cd07868 STKc_CDK8 Catalytic do 100.0 2.2E-43 4.7E-48 319.8 21.7 255 94-356 6-317 (317)
164 cd07839 STKc_CDK5 Catalytic do 100.0 6E-44 1.3E-48 318.3 17.6 259 90-356 1-284 (284)
165 cd08217 STKc_Nek2 Catalytic do 100.0 3.1E-43 6.8E-48 310.1 21.9 256 90-356 1-265 (265)
166 cd06605 PKc_MAPKK Catalytic do 100.0 7.5E-44 1.6E-48 314.4 17.9 259 89-359 1-263 (265)
167 cd05106 PTKc_CSF-1R Catalytic 100.0 1.1E-43 2.3E-48 328.2 19.6 260 82-352 31-367 (374)
168 cd06626 STKc_MEKK4 Catalytic d 100.0 5.3E-43 1.2E-47 308.7 23.1 255 90-356 1-264 (264)
169 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.3E-44 7.2E-49 318.9 15.5 253 90-358 5-258 (277)
170 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.3E-43 2.9E-48 311.4 19.0 247 89-352 4-253 (256)
171 PHA03211 serine/threonine kina 100.0 7E-44 1.5E-48 334.8 18.2 257 89-359 169-461 (461)
172 cd06640 STKc_MST4 Catalytic do 100.0 1.7E-43 3.7E-48 314.3 19.8 255 89-359 4-259 (277)
173 cd05574 STKc_phototropin_like 100.0 3.1E-43 6.7E-48 318.6 21.8 259 89-358 1-294 (316)
174 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.3E-43 2.8E-48 316.3 19.0 260 88-359 4-272 (284)
175 cd05623 STKc_MRCK_alpha Cataly 100.0 1.5E-43 3.1E-48 322.8 19.6 259 89-358 1-271 (332)
176 cd06647 STKc_PAK_I Catalytic d 100.0 1.8E-43 3.9E-48 316.7 19.8 256 88-358 18-274 (293)
177 cd06630 STKc_MEKK1 Catalytic d 100.0 4.9E-43 1.1E-47 309.7 22.2 258 90-357 1-268 (268)
178 KOG0658 Glycogen synthase kina 100.0 5.7E-45 1.2E-49 313.5 9.3 258 90-358 25-311 (364)
179 cd06632 STKc_MEKK1_plant Catal 100.0 5.5E-43 1.2E-47 307.5 21.8 252 90-356 1-258 (258)
180 cd07833 STKc_CDKL Catalytic do 100.0 2.9E-43 6.2E-48 314.5 19.5 261 89-356 1-288 (288)
181 KOG0574 STE20-like serine/thre 100.0 6.6E-46 1.4E-50 310.7 2.2 254 90-358 34-288 (502)
182 cd05578 STKc_Yank1 Catalytic d 100.0 2E-43 4.3E-48 310.6 18.1 254 90-356 1-258 (258)
183 cd05624 STKc_MRCK_beta Catalyt 100.0 2.1E-43 4.5E-48 321.5 18.7 259 89-358 1-271 (331)
184 cd06641 STKc_MST3 Catalytic do 100.0 5.9E-43 1.3E-47 310.9 21.0 253 90-358 5-258 (277)
185 cd08220 STKc_Nek8 Catalytic do 100.0 6.3E-43 1.4E-47 306.9 20.9 254 90-356 1-256 (256)
186 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.3E-43 1.4E-47 309.8 21.1 258 90-356 2-272 (272)
187 cd07845 STKc_CDK10 Catalytic d 100.0 2.3E-43 5.1E-48 318.4 18.7 267 88-360 6-297 (309)
188 cd07832 STKc_CCRK Catalytic do 100.0 8E-43 1.7E-47 311.3 21.6 262 90-357 1-286 (286)
189 cd06659 STKc_PAK6 Catalytic do 100.0 2E-43 4.4E-48 316.9 17.8 251 94-359 26-277 (297)
190 cd06608 STKc_myosinIII_like Ca 100.0 4E-43 8.6E-48 311.2 19.3 258 87-356 4-275 (275)
191 cd06648 STKc_PAK_II Catalytic 100.0 1E-42 2.2E-47 310.6 22.0 253 91-358 21-274 (285)
192 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 9.5E-43 2.1E-47 311.1 21.8 265 89-359 1-272 (287)
193 KOG2345 Serine/threonine prote 100.0 1.4E-44 3E-49 294.9 9.0 261 85-353 17-296 (302)
194 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.2E-43 4.7E-48 310.8 17.3 252 86-352 3-256 (261)
195 cd05048 PTKc_Ror Catalytic Dom 100.0 4.3E-43 9.4E-48 312.6 19.2 253 89-353 5-279 (283)
196 cd07843 STKc_CDC2L1 Catalytic 100.0 2.3E-43 5E-48 316.1 17.5 262 89-356 5-293 (293)
197 cd07867 STKc_CDC2L6 Catalytic 100.0 1.3E-42 2.7E-47 314.7 22.5 254 95-356 7-317 (317)
198 cd07844 STKc_PCTAIRE_like Cata 100.0 4.2E-43 9.1E-48 314.0 19.0 261 89-356 5-291 (291)
199 cd05108 PTKc_EGFR Catalytic do 100.0 4.1E-43 8.8E-48 317.8 19.1 251 88-353 6-264 (316)
200 cd05072 PTKc_Lyn Catalytic dom 100.0 2.8E-43 6E-48 310.2 17.5 251 87-352 4-256 (261)
201 cd05113 PTKc_Btk_Bmx Catalytic 100.0 8.2E-43 1.8E-47 306.4 20.3 249 89-353 4-254 (256)
202 cd08228 STKc_Nek6 Catalytic do 100.0 9E-43 2E-47 307.9 20.6 257 89-353 2-261 (267)
203 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5E-43 1.1E-47 313.5 19.2 261 87-356 3-291 (291)
204 cd06614 STKc_PAK Catalytic dom 100.0 6.5E-43 1.4E-47 312.0 19.7 258 87-358 17-275 (286)
205 cd05062 PTKc_IGF-1R Catalytic 100.0 6.5E-43 1.4E-47 310.6 19.5 256 86-353 3-274 (277)
206 cd06652 STKc_MEKK2 Catalytic d 100.0 1.5E-42 3.2E-47 306.2 21.6 255 89-357 2-265 (265)
207 PTZ00266 NIMA-related protein 100.0 3E-43 6.6E-48 346.5 19.0 265 85-358 9-300 (1021)
208 cd07837 STKc_CdkB_plant Cataly 100.0 5.1E-43 1.1E-47 314.0 18.9 265 89-357 1-295 (295)
209 cd06917 STKc_NAK1_like Catalyt 100.0 1.1E-42 2.3E-47 309.1 20.7 255 90-359 2-261 (277)
210 cd05068 PTKc_Frk_like Catalyti 100.0 6.7E-43 1.4E-47 307.8 19.2 252 86-352 3-256 (261)
211 cd05061 PTKc_InsR Catalytic do 100.0 1E-42 2.2E-47 311.2 20.5 261 85-358 2-285 (288)
212 KOG0579 Ste20-like serine/thre 100.0 1.4E-44 3E-49 328.8 8.4 255 91-358 34-294 (1187)
213 cd08225 STKc_Nek5 Catalytic do 100.0 7.4E-43 1.6E-47 306.6 19.1 255 90-356 1-257 (257)
214 cd07835 STKc_CDK1_like Catalyt 100.0 6.6E-43 1.4E-47 311.5 18.9 261 91-356 1-283 (283)
215 cd05033 PTKc_EphR Catalytic do 100.0 1.2E-42 2.6E-47 307.1 20.2 251 88-353 3-261 (266)
216 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.3E-42 2.8E-47 309.5 20.3 260 89-359 1-267 (283)
217 cd07836 STKc_Pho85 Catalytic d 100.0 9.3E-43 2E-47 310.6 19.3 262 90-356 1-284 (284)
218 cd05572 STKc_cGK_PKG Catalytic 100.0 1.8E-42 3.9E-47 305.2 20.9 248 97-358 1-257 (262)
219 cd06606 STKc_MAPKKK Catalytic 100.0 3E-42 6.4E-47 302.6 21.8 255 90-356 1-260 (260)
220 PLN00009 cyclin-dependent kina 100.0 1.1E-42 2.3E-47 311.9 19.4 265 89-358 2-289 (294)
221 KOG4279 Serine/threonine prote 100.0 7E-44 1.5E-48 327.2 11.8 253 96-359 582-838 (1226)
222 cd05054 PTKc_VEGFR Catalytic d 100.0 8.6E-43 1.9E-47 317.9 18.8 258 85-353 3-329 (337)
223 cd05052 PTKc_Abl Catalytic dom 100.0 9.3E-43 2E-47 307.2 18.2 251 88-353 5-258 (263)
224 cd05059 PTKc_Tec_like Catalyti 100.0 1.1E-42 2.4E-47 305.5 18.6 248 89-353 4-254 (256)
225 KOG4278 Protein tyrosine kinas 100.0 7.3E-44 1.6E-48 323.6 11.3 255 80-351 258-517 (1157)
226 cd05049 PTKc_Trk Catalytic dom 100.0 2.1E-42 4.5E-47 307.7 20.5 253 88-352 4-276 (280)
227 KOG0596 Dual specificity; seri 100.0 2.9E-43 6.2E-48 316.1 14.5 262 85-358 357-632 (677)
228 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.4E-42 3E-47 305.6 18.6 251 86-352 3-255 (260)
229 KOG0607 MAP kinase-interacting 100.0 6.2E-43 1.3E-47 294.9 15.5 264 80-358 74-366 (463)
230 cd05609 STKc_MAST Catalytic do 100.0 4.2E-42 9.1E-47 309.6 22.0 258 89-358 1-278 (305)
231 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.9E-42 8.4E-47 303.7 21.4 256 89-352 2-260 (267)
232 cd05090 PTKc_Ror1 Catalytic do 100.0 2.2E-42 4.7E-47 308.2 19.6 253 89-353 5-279 (283)
233 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.1E-42 4.6E-47 321.0 20.3 258 84-352 32-392 (400)
234 cd08229 STKc_Nek7 Catalytic do 100.0 2.8E-42 6.1E-47 304.8 20.0 256 89-352 2-260 (267)
235 cd05633 STKc_GRK3 Catalytic do 100.0 3E-42 6.5E-47 306.6 20.1 249 96-358 1-260 (279)
236 cd07865 STKc_CDK9 Catalytic do 100.0 1.8E-42 3.9E-47 312.6 19.0 263 88-356 11-310 (310)
237 cd08215 STKc_Nek Catalytic dom 100.0 8.1E-42 1.8E-46 299.7 22.5 256 90-356 1-258 (258)
238 KOG4717 Serine/threonine prote 100.0 7.2E-43 1.6E-47 311.1 15.6 255 89-358 18-275 (864)
239 cd06627 STKc_Cdc7_like Catalyt 100.0 7E-42 1.5E-46 299.7 21.7 253 90-356 1-254 (254)
240 cd05116 PTKc_Syk Catalytic dom 100.0 3.8E-42 8.3E-47 302.3 19.9 241 96-352 2-250 (257)
241 cd05577 STKc_GRK Catalytic dom 100.0 4.2E-42 9E-47 305.4 20.0 251 97-358 1-259 (277)
242 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.6E-42 5.6E-47 303.9 18.4 251 86-352 3-255 (260)
243 cd07850 STKc_JNK Catalytic dom 100.0 4.4E-42 9.5E-47 315.7 20.6 262 87-358 14-316 (353)
244 cd08219 STKc_Nek3 Catalytic do 100.0 7.3E-42 1.6E-46 300.1 21.1 251 90-353 1-252 (255)
245 cd06657 STKc_PAK4 Catalytic do 100.0 3.4E-42 7.4E-47 308.1 19.1 250 95-359 26-276 (292)
246 cd05084 PTKc_Fes Catalytic dom 100.0 4.6E-42 1E-46 300.8 19.5 243 96-352 2-248 (252)
247 KOG1989 ARK protein kinase fam 100.0 7.9E-43 1.7E-47 330.4 15.5 254 85-353 33-307 (738)
248 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.2E-42 6.9E-47 306.2 18.5 254 87-353 4-274 (277)
249 KOG4257 Focal adhesion tyrosin 100.0 8.7E-43 1.9E-47 316.6 14.9 253 84-351 384-643 (974)
250 cd05075 PTKc_Axl Catalytic dom 100.0 6.1E-42 1.3E-46 303.4 20.1 251 91-353 1-267 (272)
251 cd05093 PTKc_TrkB Catalytic do 100.0 7.9E-42 1.7E-46 305.4 20.7 252 88-352 4-274 (288)
252 cd07842 STKc_CDK8_like Catalyt 100.0 1.1E-41 2.3E-46 308.4 21.7 263 90-356 1-316 (316)
253 cd06607 STKc_TAO Catalytic dom 100.0 9.2E-42 2E-46 307.7 21.1 255 88-359 14-273 (307)
254 cd05035 PTKc_Axl_like Catalyti 100.0 7.3E-42 1.6E-46 303.0 20.1 251 91-353 1-268 (273)
255 cd05122 PKc_STE Catalytic doma 100.0 1.7E-41 3.6E-46 296.6 22.0 252 90-355 1-253 (253)
256 cd06616 PKc_MKK4 Catalytic dom 100.0 2.7E-42 5.8E-47 308.4 17.3 261 90-358 5-272 (288)
257 cd05053 PTKc_FGFR Catalytic do 100.0 2.9E-42 6.2E-47 308.9 17.5 257 84-353 7-287 (293)
258 cd08216 PK_STRAD Pseudokinase 100.0 5.8E-42 1.3E-46 310.0 19.4 257 94-358 7-300 (314)
259 KOG1025 Epidermal growth facto 100.0 3.5E-43 7.7E-48 327.7 11.6 246 91-351 698-951 (1177)
260 cd05579 STKc_MAST_like Catalyt 100.0 8E-42 1.7E-46 301.1 19.8 249 97-358 1-262 (265)
261 cd05118 STKc_CMGC Catalytic do 100.0 5E-42 1.1E-46 305.6 18.5 260 91-356 1-283 (283)
262 cd05111 PTK_HER3 Pseudokinase 100.0 1.1E-41 2.5E-46 302.9 20.4 249 89-352 7-263 (279)
263 cd05071 PTKc_Src Catalytic dom 100.0 4.7E-42 1E-46 302.6 17.7 250 87-352 4-255 (262)
264 PHA03390 pk1 serine/threonine- 100.0 3.1E-41 6.8E-46 298.1 23.0 254 82-358 7-267 (267)
265 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.7E-42 3.7E-47 316.4 15.3 264 88-358 4-296 (337)
266 cd07864 STKc_CDK12 Catalytic d 100.0 5.3E-42 1.2E-46 308.5 18.2 265 86-356 4-302 (302)
267 cd05085 PTKc_Fer Catalytic dom 100.0 1.6E-41 3.5E-46 297.0 20.7 243 96-353 2-247 (250)
268 cd05034 PTKc_Src_like Catalyti 100.0 6.8E-42 1.5E-46 301.3 18.4 251 86-352 3-256 (261)
269 cd05043 PTK_Ryk Pseudokinase d 100.0 6.2E-42 1.3E-46 304.7 18.2 255 86-352 3-271 (280)
270 cd05032 PTKc_InsR_like Catalyt 100.0 6.7E-42 1.5E-46 304.0 18.4 255 86-353 3-274 (277)
271 cd05606 STKc_beta_ARK Catalyti 100.0 2.3E-41 5E-46 300.7 21.7 250 96-359 1-261 (278)
272 cd05094 PTKc_TrkC Catalytic do 100.0 1.7E-41 3.7E-46 303.7 21.0 251 89-352 5-277 (291)
273 cd07855 STKc_ERK5 Catalytic do 100.0 2E-42 4.3E-47 315.7 15.2 264 88-358 4-299 (334)
274 cd05045 PTKc_RET Catalytic dom 100.0 1.4E-41 3E-46 304.1 20.3 251 90-352 1-281 (290)
275 cd00192 PTKc Catalytic domain 100.0 1.8E-41 3.9E-46 298.2 20.5 246 95-353 1-260 (262)
276 PHA03210 serine/threonine kina 100.0 5.3E-42 1.2E-46 327.5 18.4 269 87-359 146-460 (501)
277 cd07831 STKc_MOK Catalytic dom 100.0 1E-41 2.3E-46 303.5 19.0 257 91-356 1-282 (282)
278 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-41 2.4E-46 316.0 19.9 258 83-353 31-395 (401)
279 cd05115 PTKc_Zap-70 Catalytic 100.0 1.8E-41 3.8E-46 298.1 20.1 242 96-353 2-251 (257)
280 cd07849 STKc_ERK1_2_like Catal 100.0 4.8E-42 1E-46 313.4 17.1 263 88-359 4-298 (336)
281 cd05092 PTKc_TrkA Catalytic do 100.0 1.2E-41 2.6E-46 302.9 18.9 251 88-352 4-276 (280)
282 cd07838 STKc_CDK4_6_like Catal 100.0 2.9E-41 6.3E-46 301.3 21.4 257 91-356 1-287 (287)
283 cd05091 PTKc_Ror2 Catalytic do 100.0 1.4E-41 3.1E-46 302.9 19.4 252 90-353 6-279 (283)
284 cd05066 PTKc_EphR_A Catalytic 100.0 1.8E-41 3.8E-46 299.8 19.8 250 88-352 3-261 (267)
285 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.3E-41 2.7E-46 311.3 19.2 256 86-353 4-335 (343)
286 cd05581 STKc_PDK1 Catalytic do 100.0 1.3E-41 2.8E-46 302.4 18.6 253 89-356 1-280 (280)
287 cd05069 PTKc_Yes Catalytic dom 100.0 1.4E-41 3.1E-46 299.2 18.7 250 87-352 4-255 (260)
288 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.7E-41 8E-46 300.3 21.5 250 91-352 6-276 (283)
289 PRK13184 pknD serine/threonine 100.0 1.6E-41 3.4E-46 333.1 20.6 254 89-351 2-283 (932)
290 cd05109 PTKc_HER2 Catalytic do 100.0 2.1E-41 4.5E-46 301.2 19.6 250 88-352 6-263 (279)
291 KOG0584 Serine/threonine prote 100.0 8.4E-43 1.8E-47 318.1 10.7 254 92-359 43-302 (632)
292 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.5E-41 3.3E-46 299.3 18.5 237 96-353 2-260 (262)
293 cd05089 PTKc_Tie1 Catalytic do 100.0 1.9E-41 4.2E-46 304.2 19.4 251 89-353 2-271 (297)
294 cd05613 STKc_MSK1_N N-terminal 100.0 3.9E-41 8.5E-46 301.1 21.2 257 90-358 1-273 (290)
295 cd07840 STKc_CDK9_like Catalyt 100.0 2E-41 4.2E-46 302.3 19.2 260 91-356 1-287 (287)
296 cd05088 PTKc_Tie2 Catalytic do 100.0 1.2E-41 2.7E-46 306.3 18.0 252 88-353 6-276 (303)
297 cd05051 PTKc_DDR Catalytic dom 100.0 1.6E-41 3.5E-46 304.4 18.7 256 88-352 4-292 (296)
298 cd08226 PK_STRAD_beta Pseudoki 100.0 1.3E-41 2.9E-46 309.4 18.3 257 95-358 4-313 (328)
299 KOG0577 Serine/threonine prote 100.0 6.1E-43 1.3E-47 315.9 9.2 253 90-359 27-284 (948)
300 cd07834 STKc_MAPK Catalytic do 100.0 4.6E-42 1E-46 312.8 15.2 262 90-358 1-294 (330)
301 cd05039 PTKc_Csk_like Catalyti 100.0 2.3E-41 5E-46 297.1 19.0 247 87-352 4-251 (256)
302 cd05055 PTKc_PDGFR Catalytic d 100.0 2.8E-41 6.1E-46 303.7 19.9 256 85-352 31-296 (302)
303 cd05112 PTKc_Itk Catalytic dom 100.0 2.5E-41 5.3E-46 296.9 18.9 248 89-353 4-254 (256)
304 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.7E-41 1E-45 297.4 20.7 247 96-352 2-265 (269)
305 cd05095 PTKc_DDR2 Catalytic do 100.0 4.2E-41 9.1E-46 301.9 20.6 255 88-352 4-292 (296)
306 cd05611 STKc_Rim15_like Cataly 100.0 3.2E-41 7E-46 296.9 19.4 249 95-358 2-256 (260)
307 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.4E-41 3.1E-46 306.4 17.5 256 86-353 15-295 (307)
308 cd05073 PTKc_Hck Catalytic dom 100.0 2.6E-41 5.5E-46 297.6 18.5 252 85-352 2-255 (260)
309 cd05060 PTKc_Syk_like Catalyti 100.0 5.3E-41 1.1E-45 295.0 20.4 242 95-352 1-250 (257)
310 cd05097 PTKc_DDR_like Catalyti 100.0 1.5E-41 3.3E-46 304.5 17.3 258 88-352 4-291 (295)
311 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.4E-41 1.2E-45 299.3 20.7 255 88-353 3-279 (284)
312 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.1E-41 6.7E-46 305.2 19.2 255 85-352 8-288 (314)
313 cd05050 PTKc_Musk Catalytic do 100.0 4.2E-41 9.1E-46 300.6 19.8 254 87-352 3-284 (288)
314 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.8E-41 6E-46 299.6 18.4 237 96-353 2-272 (274)
315 cd05040 PTKc_Ack_like Catalyti 100.0 5.4E-41 1.2E-45 294.9 20.0 245 95-352 1-253 (257)
316 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.3E-41 1.6E-45 295.9 20.7 251 88-352 4-262 (268)
317 cd07852 STKc_MAPK15 Catalytic 100.0 1.7E-41 3.8E-46 309.9 17.3 263 87-358 5-300 (337)
318 cd05042 PTKc_Aatyk Catalytic d 100.0 4.7E-41 1E-45 297.3 19.4 247 96-353 2-266 (269)
319 cd05123 STKc_AGC Catalytic dom 100.0 7.8E-41 1.7E-45 292.5 20.5 245 97-356 1-250 (250)
320 cd07829 STKc_CDK_like Catalyti 100.0 1.1E-41 2.3E-46 303.3 15.3 260 91-356 1-282 (282)
321 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.2E-41 7E-46 303.7 18.5 257 85-353 11-292 (304)
322 cd06653 STKc_MEKK3_like_1 Cata 100.0 9.4E-41 2E-45 294.6 21.0 254 89-356 2-264 (264)
323 cd06618 PKc_MKK7 Catalytic dom 100.0 8.5E-41 1.8E-45 299.9 21.0 260 87-358 13-278 (296)
324 cd07866 STKc_BUR1 Catalytic do 100.0 1.4E-41 3.1E-46 306.9 15.8 263 88-356 7-311 (311)
325 cd08530 STKc_CNK2-like Catalyt 100.0 7.7E-41 1.7E-45 293.5 19.9 254 90-356 1-256 (256)
326 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.3E-41 9.3E-46 308.0 19.1 267 81-358 9-305 (345)
327 cd05065 PTKc_EphR_B Catalytic 100.0 5.2E-41 1.1E-45 297.0 19.0 250 89-353 4-264 (269)
328 cd05082 PTKc_Csk Catalytic dom 100.0 5.4E-41 1.2E-45 294.8 18.9 245 88-352 5-251 (256)
329 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.1E-40 2.3E-45 297.4 20.8 255 89-353 4-279 (284)
330 PTZ00024 cyclin-dependent prot 100.0 4.1E-41 8.9E-46 307.2 18.3 264 89-359 8-319 (335)
331 cd06635 STKc_TAO1 Catalytic do 100.0 2E-40 4.4E-45 300.3 22.4 253 89-358 25-282 (317)
332 cd05041 PTKc_Fes_like Catalyti 100.0 1.1E-40 2.5E-45 291.8 20.0 244 95-352 1-247 (251)
333 cd07879 STKc_p38delta_MAPK13 C 100.0 3.9E-41 8.4E-46 308.1 17.5 256 88-358 14-302 (342)
334 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.2E-41 1.1E-45 306.3 18.3 258 84-353 7-289 (334)
335 KOG0986 G protein-coupled rece 100.0 1.3E-41 2.9E-46 298.8 13.4 262 86-358 182-451 (591)
336 cd07830 STKc_MAK_like Catalyti 100.0 1.1E-40 2.3E-45 297.2 19.0 259 91-356 1-283 (283)
337 cd05583 STKc_MSK_N N-terminal 100.0 1.6E-40 3.6E-45 296.8 20.2 257 90-358 1-271 (288)
338 cd06633 STKc_TAO3 Catalytic do 100.0 4.7E-40 1E-44 297.3 23.4 252 91-359 23-279 (313)
339 cd05047 PTKc_Tie Catalytic dom 100.0 1.5E-40 3.3E-45 294.3 19.7 243 96-352 2-263 (270)
340 KOG0604 MAP kinase-activated p 100.0 1.3E-41 2.7E-46 284.7 11.7 259 87-359 59-328 (400)
341 cd05058 PTKc_Met_Ron Catalytic 100.0 1.5E-40 3.3E-45 292.8 19.1 245 95-353 1-255 (262)
342 cd06634 STKc_TAO2 Catalytic do 100.0 2E-40 4.3E-45 299.1 20.3 254 89-359 15-273 (308)
343 cd05057 PTKc_EGFR_like Catalyt 100.0 2.4E-40 5.1E-45 294.5 20.2 249 88-352 6-263 (279)
344 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.7E-40 3.7E-45 291.9 19.1 235 95-352 1-256 (259)
345 cd07851 STKc_p38 Catalytic dom 100.0 3.3E-41 7.2E-46 308.6 15.0 258 87-358 13-303 (343)
346 cd08528 STKc_Nek10 Catalytic d 100.0 2.6E-40 5.6E-45 292.6 20.0 253 90-353 1-266 (269)
347 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.1E-40 2.3E-45 303.2 17.9 263 85-358 6-293 (328)
348 KOG0199 ACK and related non-re 100.0 5.8E-42 1.3E-46 314.8 9.6 256 85-354 106-369 (1039)
349 KOG0586 Serine/threonine prote 100.0 6E-41 1.3E-45 305.6 16.1 256 87-358 54-311 (596)
350 cd08222 STKc_Nek11 Catalytic d 100.0 1.3E-40 2.8E-45 293.1 17.8 255 90-356 1-260 (260)
351 KOG0983 Mitogen-activated prot 100.0 2E-41 4.3E-46 280.2 11.5 255 92-358 95-354 (391)
352 cd05056 PTKc_FAK Catalytic dom 100.0 1.9E-40 4.2E-45 293.5 18.6 251 87-353 4-261 (270)
353 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.2E-40 2.5E-45 305.0 17.7 259 86-358 12-303 (343)
354 cd05083 PTKc_Chk Catalytic dom 100.0 1.8E-40 3.9E-45 291.1 17.8 244 89-353 6-250 (254)
355 smart00219 TyrKc Tyrosine kina 100.0 1E-39 2.2E-44 286.7 22.1 249 91-352 1-256 (258)
356 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4E-40 8.8E-45 293.5 19.9 254 89-352 4-278 (284)
357 cd05046 PTK_CCK4 Pseudokinase 100.0 7.2E-40 1.6E-44 290.7 21.2 255 88-353 4-272 (275)
358 cd05086 PTKc_Aatyk2 Catalytic 100.0 7.8E-40 1.7E-44 289.4 20.4 246 96-352 2-264 (268)
359 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.4E-40 3E-45 304.4 15.8 261 88-358 4-305 (342)
360 cd05110 PTKc_HER4 Catalytic do 100.0 3.7E-40 8E-45 296.7 18.2 251 88-353 6-264 (303)
361 cd07857 STKc_MPK1 Catalytic do 100.0 4.7E-40 1E-44 299.7 18.5 261 90-357 1-296 (332)
362 KOG0666 Cyclin C-dependent kin 100.0 2.9E-41 6.3E-46 283.8 9.4 268 88-359 23-343 (438)
363 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.4E-40 7.4E-45 290.1 16.7 237 96-353 2-256 (258)
364 cd05074 PTKc_Tyro3 Catalytic d 100.0 1E-39 2.3E-44 289.3 19.5 251 91-353 1-268 (273)
365 cd05044 PTKc_c-ros Catalytic d 100.0 4.3E-40 9.3E-45 291.1 16.5 245 95-352 1-265 (269)
366 KOG0690 Serine/threonine prote 100.0 1.4E-40 3E-45 281.5 11.2 257 87-358 166-429 (516)
367 KOG1024 Receptor-like protein 100.0 5E-40 1.1E-44 284.2 14.9 260 81-352 276-550 (563)
368 KOG1035 eIF-2alpha kinase GCN2 100.0 1.7E-40 3.6E-45 321.7 13.2 257 89-358 479-876 (1351)
369 KOG0200 Fibroblast/platelet-de 100.0 1.7E-39 3.6E-44 315.1 17.8 258 83-352 290-574 (609)
370 cd05610 STKc_MASTL Catalytic d 100.0 6.3E-39 1.4E-43 315.5 21.4 147 89-241 4-152 (669)
371 KOG0662 Cyclin-dependent kinas 100.0 3.9E-40 8.4E-45 256.9 8.8 263 90-358 3-288 (292)
372 KOG0587 Traf2- and Nck-interac 100.0 4.7E-39 1E-43 302.8 17.8 266 80-358 10-287 (953)
373 cd05576 STKc_RPK118_like Catal 100.0 5.7E-39 1.2E-43 278.7 16.8 228 100-356 4-237 (237)
374 KOG4645 MAPKKK (MAP kinase kin 100.0 3.7E-41 8E-46 327.8 3.0 256 88-357 1234-1498(1509)
375 KOG4236 Serine/threonine prote 100.0 3.3E-40 7.1E-45 294.8 7.7 253 94-360 569-826 (888)
376 KOG0671 LAMMER dual specificit 100.0 3.4E-40 7.4E-45 284.7 7.6 263 85-358 85-411 (415)
377 PHA02882 putative serine/threo 100.0 1.2E-38 2.7E-43 285.4 17.7 253 86-352 9-291 (294)
378 KOG0603 Ribosomal protein S6 k 100.0 7.9E-39 1.7E-43 293.2 14.2 243 88-356 321-566 (612)
379 PLN03224 probable serine/threo 100.0 6.2E-38 1.3E-42 294.4 19.1 267 87-360 143-507 (507)
380 smart00220 S_TKc Serine/Threon 100.0 2.8E-37 6E-42 268.1 18.9 243 101-356 1-244 (244)
381 KOG0612 Rho-associated, coiled 100.0 5.3E-39 1.1E-43 309.2 8.5 264 81-358 67-343 (1317)
382 PLN03225 Serine/threonine-prot 100.0 9.3E-38 2E-42 300.2 16.9 264 87-359 130-456 (566)
383 KOG4250 TANK binding protein k 100.0 4.5E-38 9.8E-43 290.7 13.7 203 91-298 15-229 (732)
384 KOG0669 Cyclin T-dependent kin 100.0 9.2E-40 2E-44 267.5 1.7 265 90-360 18-322 (376)
385 KOG1151 Tousled-like protein k 100.0 1.4E-38 3E-43 279.3 8.6 269 81-360 455-748 (775)
386 KOG1027 Serine/threonine prote 100.0 8.1E-39 1.8E-43 299.8 6.9 249 91-357 511-771 (903)
387 KOG1006 Mitogen-activated prot 100.0 1E-39 2.2E-44 269.0 0.7 260 92-358 67-332 (361)
388 KOG0696 Serine/threonine prote 100.0 4.7E-38 1E-42 273.7 10.9 258 86-358 346-611 (683)
389 KOG0614 cGMP-dependent protein 100.0 9.5E-38 2.1E-42 277.9 4.6 256 89-358 420-682 (732)
390 KOG0695 Serine/threonine prote 100.0 6.3E-36 1.4E-40 254.4 13.5 260 87-358 248-521 (593)
391 KOG0608 Warts/lats-like serine 100.0 2.3E-35 5E-40 268.9 13.5 257 90-358 630-933 (1034)
392 KOG1290 Serine/threonine prote 100.0 1.1E-34 2.4E-39 257.4 16.4 133 88-227 77-222 (590)
393 KOG0670 U4/U6-associated splic 100.0 2.9E-35 6.3E-40 262.8 8.3 270 80-358 423-751 (752)
394 KOG0664 Nemo-like MAPK-related 100.0 4.7E-36 1E-40 248.5 2.8 259 93-358 57-348 (449)
395 KOG0668 Casein kinase II, alph 100.0 2.6E-35 5.5E-40 238.2 6.1 257 87-358 36-327 (338)
396 KOG0665 Jun-N-terminal kinase 100.0 4.5E-35 9.9E-40 247.6 7.3 259 88-357 16-314 (369)
397 KOG0576 Mitogen-activated prot 100.0 4.7E-35 1E-39 268.3 6.2 261 87-360 13-278 (829)
398 cd00180 PKc Catalytic domain o 100.0 2E-32 4.3E-37 232.1 20.0 212 97-354 1-215 (215)
399 KOG0984 Mitogen-activated prot 100.0 1.3E-33 2.7E-38 225.0 9.8 222 84-312 41-269 (282)
400 PLN00181 protein SPA1-RELATED; 100.0 4.2E-32 9.1E-37 273.3 8.7 200 143-358 28-270 (793)
401 smart00221 STYKc Protein kinas 100.0 2.8E-30 6.1E-35 221.7 18.6 199 91-295 1-202 (225)
402 KOG1167 Serine/threonine prote 100.0 9.8E-32 2.1E-36 235.4 8.9 262 84-358 31-386 (418)
403 KOG1152 Signal transduction se 100.0 3.5E-31 7.6E-36 239.4 7.9 198 89-294 561-770 (772)
404 smart00750 KIND kinase non-cat 100.0 3.3E-30 7.2E-35 213.2 10.6 166 172-357 1-169 (176)
405 KOG1345 Serine/threonine kinas 100.0 1.7E-30 3.8E-35 215.2 8.2 244 87-344 22-275 (378)
406 KOG0195 Integrin-linked kinase 100.0 7.2E-29 1.6E-33 205.9 6.9 243 91-351 192-440 (448)
407 KOG0590 Checkpoint kinase and 99.9 4.8E-28 1E-32 232.5 6.1 259 93-358 322-590 (601)
408 PRK09188 serine/threonine prot 99.9 1.2E-25 2.6E-30 203.1 16.1 166 85-266 14-193 (365)
409 COG0515 SPS1 Serine/threonine 99.9 2.9E-24 6.2E-29 194.7 20.6 263 91-358 2-280 (384)
410 KOG1164 Casein kinase (serine/ 99.9 1.1E-24 2.5E-29 197.0 15.7 202 90-298 19-242 (322)
411 KOG1163 Casein kinase (serine/ 99.9 7.1E-25 1.5E-29 179.1 8.7 219 86-314 12-242 (341)
412 KOG1240 Protein kinase contain 99.9 2.2E-25 4.8E-30 215.3 3.8 245 90-353 24-291 (1431)
413 KOG1165 Casein kinase (serine/ 99.9 2.6E-23 5.5E-28 177.4 13.8 216 86-311 25-254 (449)
414 KOG1023 Natriuretic peptide re 99.9 1E-23 2.2E-28 194.0 11.9 206 141-351 1-218 (484)
415 KOG0603 Ribosomal protein S6 k 99.9 3.6E-25 7.7E-30 203.8 2.1 237 97-358 2-248 (612)
416 PRK10359 lipopolysaccharide co 99.9 1.3E-23 2.8E-28 176.9 11.0 189 71-287 11-216 (232)
417 cd05147 RIO1_euk RIO kinase fa 99.9 1.9E-23 4.2E-28 173.8 11.6 141 94-243 2-167 (190)
418 cd05145 RIO1_like RIO kinase f 99.9 3E-22 6.4E-27 167.3 14.1 141 94-244 2-168 (190)
419 PF14531 Kinase-like: Kinase-l 99.9 8.6E-22 1.9E-26 170.8 12.3 234 91-344 14-288 (288)
420 PRK12274 serine/threonine prot 99.9 3.5E-21 7.6E-26 158.8 14.7 185 92-294 5-208 (218)
421 KOG1033 eIF-2alpha kinase PEK/ 99.8 4.5E-22 9.7E-27 180.1 2.7 180 161-357 330-516 (516)
422 PRK10345 hypothetical protein; 99.8 8.7E-20 1.9E-24 153.3 14.0 135 93-240 6-156 (210)
423 KOG1166 Mitotic checkpoint ser 99.8 1.3E-20 2.7E-25 185.3 9.1 199 83-292 692-902 (974)
424 smart00090 RIO RIO-like kinase 99.8 1.6E-19 3.4E-24 155.4 13.7 143 90-243 29-198 (237)
425 KOG4158 BRPK/PTEN-induced prot 99.8 1E-19 2.2E-24 159.1 11.8 189 145-349 274-506 (598)
426 cd05144 RIO2_C RIO kinase fami 99.8 2.2E-19 4.7E-24 151.2 12.6 147 82-244 8-176 (198)
427 PRK14879 serine/threonine prot 99.8 4.6E-19 1E-23 150.9 13.6 136 95-242 2-143 (211)
428 TIGR03724 arch_bud32 Kae1-asso 99.8 9.5E-19 2.1E-23 147.5 12.9 131 97-242 2-138 (199)
429 PRK09605 bifunctional UGMP fam 99.8 1.1E-18 2.5E-23 168.3 13.1 141 87-243 331-477 (535)
430 KOG0606 Microtubule-associated 99.8 3.3E-19 7.2E-24 172.7 7.3 220 88-358 82-320 (1205)
431 KOG0590 Checkpoint kinase and 99.7 3.4E-19 7.4E-24 171.6 2.2 262 88-358 19-291 (601)
432 cd05119 RIO RIO kinase family, 99.7 1.6E-17 3.4E-22 138.6 11.7 138 94-244 2-165 (187)
433 cd05120 APH_ChoK_like Aminogly 99.7 1.2E-16 2.6E-21 128.2 13.2 135 93-242 2-138 (155)
434 PRK01723 3-deoxy-D-manno-octul 99.7 3.9E-16 8.3E-21 134.7 13.4 137 95-243 37-192 (239)
435 KOG1266 Protein kinase [Signal 99.6 3.8E-16 8.3E-21 133.8 6.6 207 138-357 118-335 (458)
436 KOG0601 Cyclin-dependent kinas 99.6 4.2E-16 9.2E-21 144.1 5.7 255 89-360 114-386 (524)
437 TIGR01982 UbiB 2-polyprenylphe 99.6 1.3E-14 2.8E-19 135.8 12.5 143 94-244 122-308 (437)
438 KOG1243 Protein kinase [Genera 99.5 1.9E-13 4E-18 128.0 12.8 169 109-291 33-201 (690)
439 cd05151 ChoK Choline Kinase (C 99.5 3.5E-13 7.6E-18 110.5 9.8 129 95-241 4-135 (170)
440 PRK04750 ubiB putative ubiquin 99.5 1.2E-13 2.7E-18 130.8 7.8 146 89-245 120-316 (537)
441 KOG0601 Cyclin-dependent kinas 99.4 1E-13 2.2E-18 128.5 4.1 250 87-357 263-518 (524)
442 cd05146 RIO3_euk RIO kinase fa 99.4 4.2E-12 9.2E-17 104.9 12.6 138 95-244 3-175 (197)
443 KOG0606 Microtubule-associated 99.3 4.4E-13 9.5E-18 130.9 3.2 262 86-359 801-1098(1205)
444 cd05154 ACAD10_11_like Acyl-Co 99.3 2.1E-11 4.5E-16 104.4 13.0 142 95-241 4-205 (223)
445 COG3642 Mn2+-dependent serine/ 99.3 3.8E-11 8.3E-16 96.0 11.9 132 96-242 3-140 (204)
446 KOG3087 Serine/threonine prote 99.3 1.5E-10 3.3E-15 92.2 13.2 146 93-243 11-166 (229)
447 KOG2137 Protein kinase [Signal 99.2 5.8E-12 1.3E-16 118.6 3.2 158 196-360 105-272 (700)
448 PRK15123 lipopolysaccharide co 99.2 1.5E-09 3.2E-14 94.9 15.2 140 97-242 30-194 (268)
449 PF01163 RIO1: RIO1 family; I 99.1 5.2E-10 1.1E-14 92.2 11.6 128 104-244 1-157 (188)
450 COG4248 Uncharacterized protei 99.0 1.1E-08 2.4E-13 91.6 15.7 195 92-297 14-226 (637)
451 COG0478 RIO-like serine/threon 99.0 4.1E-09 8.9E-14 89.5 11.9 138 91-243 93-252 (304)
452 KOG3741 Poly(A) ribonuclease s 99.0 5.4E-09 1.2E-13 95.8 12.7 170 101-292 288-475 (655)
453 PRK09902 hypothetical protein; 98.9 7.5E-08 1.6E-12 80.0 13.2 140 97-242 26-179 (216)
454 PF06293 Kdo: Lipopolysacchari 98.8 3.3E-08 7.2E-13 83.5 10.5 106 132-243 56-171 (206)
455 COG0661 AarF Predicted unusual 98.8 5.9E-08 1.3E-12 91.9 11.5 143 95-245 131-317 (517)
456 PF06176 WaaY: Lipopolysacchar 98.7 4E-07 8.8E-12 75.9 13.1 141 86-242 28-183 (229)
457 TIGR02172 Fb_sc_TIGR02172 Fibr 98.7 4.4E-07 9.6E-12 77.6 13.6 132 95-241 7-181 (226)
458 COG1718 RIO1 Serine/threonine 98.6 1.4E-06 3E-11 73.6 14.3 155 79-244 35-217 (268)
459 KOG1035 eIF-2alpha kinase GCN2 98.5 3.1E-07 6.7E-12 92.0 9.3 203 131-358 226-439 (1351)
460 PF01636 APH: Phosphotransfera 98.4 4.2E-06 9.2E-11 72.0 13.1 142 95-241 3-196 (239)
461 PF12260 PIP49_C: Protein-kina 98.4 1.9E-06 4.1E-11 71.4 9.7 104 136-243 8-112 (188)
462 KOG0576 Mitogen-activated prot 98.4 2.5E-08 5.5E-13 93.6 -1.8 242 93-358 246-489 (829)
463 cd05150 APH Aminoglycoside 3'- 98.4 4.7E-06 1E-10 72.4 12.4 139 97-241 6-192 (244)
464 KOG1235 Predicted unusual prot 98.4 2.7E-06 5.9E-11 80.5 11.5 141 95-244 167-356 (538)
465 COG2112 Predicted Ser/Thr prot 98.4 3.1E-06 6.7E-11 67.7 9.8 131 91-243 24-156 (201)
466 PLN02876 acyl-CoA dehydrogenas 98.3 1.7E-05 3.7E-10 80.9 14.9 80 94-174 43-131 (822)
467 PRK10593 hypothetical protein; 98.2 4.2E-05 9.1E-10 68.4 14.4 78 92-174 17-100 (297)
468 PF10707 YrbL-PhoP_reg: PhoP r 98.2 4.7E-05 1E-09 63.4 13.7 134 94-240 6-170 (199)
469 cd05155 APH_ChoK_like_1 Unchar 98.2 1.9E-05 4E-10 68.3 11.1 74 95-176 3-83 (235)
470 PF13095 FTA2: Kinetochore Sim 98.1 4.2E-05 9.1E-10 63.2 10.7 127 89-240 37-206 (207)
471 cd05157 ETNK_euk Ethanolamine 98.1 7.2E-05 1.6E-09 64.5 12.2 74 95-175 4-80 (235)
472 TIGR02721 ycfN_thiK thiamine k 98.0 6.9E-05 1.5E-09 65.6 11.0 138 97-242 4-175 (256)
473 PRK09550 mtnK methylthioribose 97.9 0.00022 4.7E-09 65.9 13.5 77 95-173 32-117 (401)
474 PRK05231 homoserine kinase; Pr 97.8 0.00062 1.3E-08 61.7 14.6 156 80-241 8-216 (319)
475 cd05153 HomoserineK_II Homoser 97.8 0.00035 7.6E-09 62.5 12.4 142 94-241 19-204 (296)
476 cd05156 ChoK_euk Choline Kinas 97.8 0.00023 4.9E-09 64.0 11.1 140 95-241 4-212 (302)
477 TIGR00938 thrB_alt homoserine 97.7 0.0012 2.7E-08 59.4 14.2 142 95-241 28-216 (307)
478 COG3173 Predicted aminoglycosi 97.5 0.0026 5.7E-08 56.8 13.0 137 97-243 33-229 (321)
479 KOG2268 Serine/threonine prote 97.4 0.00025 5.4E-09 62.5 5.7 137 91-243 94-252 (465)
480 KOG2270 Serine/threonine prote 97.4 0.003 6.5E-08 56.8 12.4 142 93-243 148-314 (520)
481 PF03881 Fructosamin_kin: Fruc 97.4 0.00078 1.7E-08 59.7 8.9 74 93-172 21-97 (288)
482 KOG1093 Predicted protein kina 97.4 0.00013 2.9E-09 67.8 3.8 191 105-358 5-199 (725)
483 KOG1826 Ras GTPase activating 97.4 1.4E-05 3.1E-10 82.5 -3.2 163 132-294 1274-1441(2724)
484 cd05152 MPH2' Macrolide 2'-Pho 97.3 0.0031 6.7E-08 55.8 11.1 31 212-242 185-216 (276)
485 PLN02236 choline kinase 97.1 0.0065 1.4E-07 55.6 11.5 139 96-241 43-230 (344)
486 PLN02756 S-methyl-5-thioribose 97.1 0.0099 2.1E-07 55.0 12.1 75 94-171 37-119 (418)
487 TIGR02904 spore_ysxE spore coa 96.9 0.013 2.8E-07 52.8 11.7 30 212-241 196-225 (309)
488 TIGR02906 spore_CotS spore coa 96.8 0.019 4E-07 51.8 11.6 29 212-241 187-215 (313)
489 PLN02421 phosphotransferase, a 96.7 0.019 4.1E-07 52.2 10.8 139 97-242 22-213 (330)
490 COG2334 Putative homoserine ki 96.7 0.067 1.5E-06 48.4 14.0 136 101-241 37-227 (331)
491 TIGR01767 MTRK 5-methylthiorib 96.5 0.027 5.9E-07 51.2 10.4 75 96-172 2-85 (370)
492 PRK11768 serine/threonine prot 96.3 0.55 1.2E-05 42.6 17.6 93 79-174 11-114 (325)
493 COG3001 Uncharacterized protei 96.3 0.073 1.6E-06 45.0 10.6 75 95-175 22-99 (286)
494 PRK06148 hypothetical protein; 96.2 0.11 2.4E-06 54.5 14.4 151 86-242 19-236 (1013)
495 PF01633 Choline_kinase: Choli 96.1 0.014 3.1E-07 49.3 5.8 29 213-241 144-173 (211)
496 PTZ00384 choline kinase; Provi 95.9 0.085 1.8E-06 48.9 10.7 73 96-175 57-137 (383)
497 COG5072 ALK1 Serine/threonine 95.9 0.057 1.2E-06 48.8 8.8 72 161-243 300-371 (488)
498 PF07387 Seadorna_VP7: Seadorn 95.6 0.08 1.7E-06 44.6 8.0 118 100-240 73-190 (308)
499 PF08693 SKG6: Transmembrane a 95.4 0.017 3.8E-07 33.8 2.5 14 37-50 24-37 (40)
500 PF01102 Glycophorin_A: Glycop 95.4 0.0074 1.6E-07 45.5 1.3 30 25-54 65-94 (122)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-56 Score=401.87 Aligned_cols=272 Identities=38% Similarity=0.643 Sum_probs=226.7
Q ss_pred CCCCcCHHHHHHHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeE
Q 042457 75 YDGRITFEEIIVATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYG 154 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 154 (361)
....++++++..+|++|+..+.||+|+||.||+|.+++|+.||||++....... ..+|.+|++++.+++|||+|+++|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEE
Confidence 345689999999999999999999999999999999999999999887765542 356999999999999999999999
Q ss_pred EEeeCC-eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeE
Q 042457 155 FCLHKK-CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAF 233 (361)
Q Consensus 155 ~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~k 233 (361)
||.+.+ ..+||||||++|+|.++|+..... .++|.+|++|+.++|+||+|||+.+.+.|+||||||+|||+|+++++|
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 999998 599999999999999999986654 789999999999999999999999988999999999999999999999
Q ss_pred EeeecCccccCCCCCCcccc-cccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcc---h------
Q 042457 234 VADFGVARLLHSDSSNRTVV-AGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPK---I------ 303 (361)
Q Consensus 234 l~Dfg~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~---~------ 303 (361)
|+|||+++............ .||.+|+|||+...+..+.|+||||||++|+||+||+.+.+........ .
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 99999996654311111222 7999999999999999999999999999999999999887753311111 1
Q ss_pred ---hHhhhhcccCCCCCCChhh-HHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 304 ---MLIDLLDQRAPSPIDDQTV-IQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 304 ---~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
...++++..+.. .... ...+..+..++..|++.+|.+||+|.|+++
T Consensus 298 ~~~~~~eiiD~~l~~---~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKE---GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HCcchhheeCCCccC---CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 122233333221 1112 156667999999999999999999999764
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-55 Score=380.26 Aligned_cols=257 Identities=28% Similarity=0.428 Sum_probs=219.9
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC-eEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK-CMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e 167 (361)
+++..+.||+|..|+||++.++ +++.+|+|++... .+.+..+++.+|+++++..+||+||.+||.|..+. ...++||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 3445677999999999999764 6889999999443 34455688999999999999999999999999998 5999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHY-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||++|+|++++...+ .+++...-+++.+|++||.|||+ + +|+||||||+|||++..|++||+|||.+..+...
T Consensus 159 YMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred hcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 999999999998764 58999999999999999999996 6 9999999999999999999999999999887554
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCc--ccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLL--SSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
.....+||..|||||.+.+..|+.++||||||+.++|+.+|+.|+... ...+.-..+..++.+..+......
T Consensus 233 --~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~---- 306 (364)
T KOG0581|consen 233 --IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGE---- 306 (364)
T ss_pred --hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCccc----
Confidence 445567999999999999999999999999999999999999998764 223444556677776655443331
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
...++..++..||++||.+|||++|+++|||+++.
T Consensus 307 fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 307 FSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence 12258899999999999999999999999999863
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-54 Score=393.55 Aligned_cols=256 Identities=24% Similarity=0.430 Sum_probs=223.6
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
.+|...+.||+|||+.+|.++. .+|+.||+|++..... .....+...+|+++.+.++|||||+++++|++.+++|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688899999999999999976 8899999999976432 2223577889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
|+|++++|..+++... ++++.+++.++.||+.||.|||++ +|+|||||..|+++++++++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krrk---~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK---PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999998544 799999999999999999999999 9999999999999999999999999999999888
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
.......+||+.|.|||++....++..+||||+||+||-|+.|++||+... .......+.......|.....
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~---vkety~~Ik~~~Y~~P~~ls~----- 243 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT---VKETYNKIKLNEYSMPSHLSA----- 243 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch---HHHHHHHHHhcCcccccccCH-----
Confidence 788888899999999999999999999999999999999999999998543 223334444444444433222
Q ss_pred HHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
+..+||.++|++||.+|||+++||.|+||+..
T Consensus 244 -~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 244 -EAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred -HHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 37788999999999999999999999999653
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-54 Score=377.25 Aligned_cols=262 Identities=25% Similarity=0.351 Sum_probs=216.2
Q ss_pred HhcCCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchH-----HHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETEL-----AFLESFQTEARLLSQIRHRNIVKLYGFCLHKK 160 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 160 (361)
..+.|.+.+.||+|+||.|-+| ..++|+.||||++....... .......+|+++|++++|||||++++++...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 3455777889999999999999 55689999999997654321 11234579999999999999999999999999
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC---CCeEEeee
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK---LEAFVADF 237 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~---~~~kl~Df 237 (361)
..|+||||++||.|.+.+-.+. .+.+..-..+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 9999999999999999987765 467777789999999999999999 99999999999999766 77999999
Q ss_pred cCccccCCCCCCccccccccccccccccccccc---CccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCC
Q 042457 238 GVARLLHSDSSNRTVVAGTHGYIAPELAYTMVV---TEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAP 314 (361)
Q Consensus 238 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 314 (361)
|+|+... ........+||+.|.|||++.+... ..+.|+||+||+||-+++|.+||.+... .......+..++..
T Consensus 324 GlAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~--~~sl~eQI~~G~y~ 400 (475)
T KOG0615|consen 324 GLAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT--DPSLKEQILKGRYA 400 (475)
T ss_pred chhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC--CccHHHHHhcCccc
Confidence 9999875 4455667889999999999876543 3478999999999999999999985442 33345666666665
Q ss_pred CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 315 SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.....+ .+-.++..+||.+||..||++|||+.|+|+||||+..
T Consensus 401 f~p~~w--~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~ 443 (475)
T KOG0615|consen 401 FGPLQW--DRISEEALDLINWMLVVDPENRPSADEALNHPWFKDA 443 (475)
T ss_pred ccChhh--hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence 433322 2223468899999999999999999999999999853
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-53 Score=384.68 Aligned_cols=252 Identities=31% Similarity=0.532 Sum_probs=207.8
Q ss_pred hcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC-eEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK-CMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~ 166 (361)
..++.+.+.+|+|+||+||+|.+.+...||||++..........+.|.+|+.+|.+++|||||+++|+|.... ..++||
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 3344445569999999999999954444999999877654444689999999999999999999999999987 799999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCC-eEEeCCCCCCeeeCCCC-CeEEeeecCccccC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPS-IVHRDISSNNILLNSKL-EAFVADFGVARLLH 244 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~-i~H~dlk~~Nill~~~~-~~kl~Dfg~~~~~~ 244 (361)
||+++|+|..+++.. ....+++..+++++.|||+||.|||++ + |+||||||+|||++.++ ++||+|||+++...
T Consensus 120 Ey~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKV 195 (362)
T ss_pred EeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeec
Confidence 999999999999874 223799999999999999999999999 7 99999999999999997 99999999998765
Q ss_pred CCCCCccccccccccccccccc--ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhh-cc-cCCCCCCCh
Q 042457 245 SDSSNRTVVAGTHGYIAPELAY--TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLL-DQ-RAPSPIDDQ 320 (361)
Q Consensus 245 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 320 (361)
......+...||..|||||++. ...++.|+||||||++||||+||+.||...... .....+. .. ++..+...
T Consensus 196 ~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~---~~~~~v~~~~~Rp~~p~~~- 271 (362)
T KOG0192|consen 196 ISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV---QVASAVVVGGLRPPIPKEC- 271 (362)
T ss_pred cccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHhcCCCCCCCccC-
Confidence 4433444467999999999999 569999999999999999999999999876651 1222222 22 22222222
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
...+..++.+||+.||+.||++.+++.
T Consensus 272 -----~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 272 -----PPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred -----CHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 224788888999999999999999873
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-53 Score=378.43 Aligned_cols=254 Identities=28% Similarity=0.483 Sum_probs=210.9
Q ss_pred HHHHHHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCe
Q 042457 82 EEIIVATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKC 161 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 161 (361)
+.+++..+.+.+.+.||+|.||+||.|.++....||+|.++...... +.|.+|+++|++++|+|||+++|+|..++.
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~---~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p 275 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSP---EAFLREAQIMKKLRHEKLVKLYGVCTKQEP 275 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccCh---hHHHHHHHHHHhCcccCeEEEEEEEecCCc
Confidence 34445555666778899999999999999877799999998865543 678899999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
++||||||+.|+|.++|+... ...++..+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+++
T Consensus 276 iyIVtE~m~~GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 276 IYIVTEYMPKGSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred eEEEEEecccCcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccccccc
Confidence 999999999999999999833 23689999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCCc-ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhh-cccCCCCCC
Q 042457 242 LLHSDSSNR-TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLL-DQRAPSPID 318 (361)
Q Consensus 242 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~ 318 (361)
....+.... ....-...|.|||.+..+.++.|||||||||+||||+| |+.|+...+..+ .+..+- ..+++.|..
T Consensus 352 ~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e---v~~~le~GyRlp~P~~ 428 (468)
T KOG0197|consen 352 LIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE---VLELLERGYRLPRPEG 428 (468)
T ss_pred ccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH---HHHHHhccCcCCCCCC
Confidence 554444322 22234568999999999999999999999999999999 999987655322 222222 224445544
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCCCCCccccc
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSF 351 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 351 (361)
.+. .+.+++..||+.+|++|||++.+.
T Consensus 429 CP~------~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 429 CPD------EVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred CCH------HHHHHHHHHhhCCcccCCCHHHHH
Confidence 333 488999999999999999998654
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-51 Score=358.69 Aligned_cols=259 Identities=26% Similarity=0.462 Sum_probs=212.9
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
..+|.+.+.||+|+||+||+|++. ++..||||.+....-.....+.+..|+.+|+.++|||||++++++..++.+|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 356888888999999999999764 5899999999887655556788999999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC------CCeEEeeecCc
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK------LEAFVADFGVA 240 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~------~~~kl~Dfg~~ 240 (361)
|||.||+|.++++..+ .+++...+.++.|+|.||++||++ +|+||||||.|||++.. -.+||+|||++
T Consensus 89 EyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 9999999999999876 699999999999999999999999 99999999999999765 45899999999
Q ss_pred cccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCCh
Q 042457 241 RLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQ 320 (361)
Q Consensus 241 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (361)
+.+.. .......+|++-|||||++...+|+.|+|+||+|+++||+++|+.||+.... ...+..+.......+....
T Consensus 163 R~L~~-~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~---~eL~~~~~k~~~~~~~~~~ 238 (429)
T KOG0595|consen 163 RFLQP-GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP---KELLLYIKKGNEIVPVLPA 238 (429)
T ss_pred hhCCc-hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH---HHHHHHHhccccccCchhh
Confidence 98863 3334556899999999999999999999999999999999999999885443 1111111111111111100
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.....+.+++...++.+|.+|-++.+-+.|+++...
T Consensus 239 ---~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 239 ---ELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAAN 274 (429)
T ss_pred ---hccCchhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence 011124567778888999999999999999988654
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-51 Score=351.93 Aligned_cols=257 Identities=26% Similarity=0.406 Sum_probs=222.4
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 164 (361)
..++|++.+.||+|+||+||.++. ++++.+|+|++++...- ....+...+|..+|.+++||.||+++-.|++.+.+|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 356799999999999999999954 56899999999876432 2245788899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
|+||+.||.|..+|++.+ .+++..+.-++..|+.||.|||+. +|+||||||+|||+|++|.++|+|||+++...
T Consensus 103 Vld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EEeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 999999999999998776 699999999999999999999999 99999999999999999999999999999766
Q ss_pred CCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCC-ChhhH
Q 042457 245 SDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPID-DQTVI 323 (361)
Q Consensus 245 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 323 (361)
.........+||+.|||||++.+..|+.++|.||+|+++|||++|.+||...+ .......+...+...+.. .+.
T Consensus 177 ~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~---~~~~~~~I~~~k~~~~p~~ls~-- 251 (357)
T KOG0598|consen 177 KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED---VKKMYDKILKGKLPLPPGYLSE-- 251 (357)
T ss_pred cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc---HHHHHHHHhcCcCCCCCccCCH--
Confidence 66666667899999999999999999999999999999999999999987543 344455566665333222 221
Q ss_pred HHHHHHHHHHhhhcCCCCCCCC----CccccccCCCCCC
Q 042457 324 QDIILVSKIAFACLRSKPKSRP----TMRRSFPNPEINP 358 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RP----s~~eil~hp~~~~ 358 (361)
...+++.+.|+.||++|. ++.+|-+||||+.
T Consensus 252 ----~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~ 286 (357)
T KOG0598|consen 252 ----EARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG 286 (357)
T ss_pred ----HHHHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence 377888999999999995 7899999999986
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=9.7e-52 Score=345.77 Aligned_cols=263 Identities=25% Similarity=0.379 Sum_probs=221.8
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
+.|+...++|+|+||.||+++.+ +|+.||||++..+..+....+-.++|+++|++++|+|+|.++.+|......+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 34677788999999999999765 69999999999888877777888999999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
||+..-|.++=+... .++...+.+++.|++.|+.|+|++ +++||||||+|||++.++.+||||||+|+.+..+.
T Consensus 82 ~~dhTvL~eLe~~p~---G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 82 YCDHTVLHELERYPN---GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred ecchHHHHHHHhccC---CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence 999877766554444 478899999999999999999999 99999999999999999999999999999998777
Q ss_pred CCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc---------------
Q 042457 248 SNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ--------------- 311 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--------------- 311 (361)
...+.++.|..|.|||.+.+ .+|....||||+||++.||++|.+.|...++.+.-......+..
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 77788889999999999887 78999999999999999999999999887776544433332222
Q ss_pred ---cCCCCCCChhhH----HHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 312 ---RAPSPIDDQTVI----QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 312 ---~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
..|.+...+... .....+.++++.||+.||.+|+|.+|++.||||+
T Consensus 236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 112222211111 1122478999999999999999999999999994
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-50 Score=381.62 Aligned_cols=257 Identities=26% Similarity=0.449 Sum_probs=213.5
Q ss_pred HHHHHHhcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEE
Q 042457 82 EEIIVATEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGF 155 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 155 (361)
.-.++...+....+.||+|+||+||+|+.. +...||||.++...... ...+|++|++++..++|||||+++|+
T Consensus 479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~-~~~dF~REaeLla~l~H~nIVrLlGV 557 (774)
T KOG1026|consen 479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQ-ARQDFRREAELLAELQHPNIVRLLGV 557 (774)
T ss_pred ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHH-HHHHHHHHHHHHHhccCCCeEEEEEE
Confidence 334556677788889999999999999653 34579999999876653 35889999999999999999999999
Q ss_pred EeeCCeEEEEEEeccCCChhhhhccCCc-----------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCe
Q 042457 156 CLHKKCMFLIYKYMRRGSLFCVLRNDDE-----------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNI 224 (361)
Q Consensus 156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Ni 224 (361)
|.+++..++|+|||..|+|.++|+...+ ..+++..+.+.|+.|||.||.||-++ .+|||||..+|+
T Consensus 558 C~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNC 634 (774)
T KOG1026|consen 558 CREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNC 634 (774)
T ss_pred EccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhc
Confidence 9999999999999999999999975321 23489999999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeeecCccccCCCCCCcc--cccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCc
Q 042457 225 LLNSKLEAFVADFGVARLLHSDSSNRT--VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNP 301 (361)
Q Consensus 225 ll~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 301 (361)
||.++..|||+|||+++.+.+..+... ...-..+|||||.++.+++|.+||||||||+|||+++ |+.||...+.
T Consensus 635 LVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn--- 711 (774)
T KOG1026|consen 635 LVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN--- 711 (774)
T ss_pred eeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch---
Confidence 999999999999999998765443321 2234679999999999999999999999999999999 9999876553
Q ss_pred chhHhhhhcccC-CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccc
Q 042457 302 KIMLIDLLDQRA-PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSF 351 (361)
Q Consensus 302 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 351 (361)
...+..+..++. +.|...+ .++++|+..||+.+|.+|||++||-
T Consensus 712 ~EVIe~i~~g~lL~~Pe~CP------~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 712 QEVIECIRAGQLLSCPENCP------TEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HHHHHHHHcCCcccCCCCCC------HHHHHHHHHHhhcCcccCCCHHHHH
Confidence 334444444443 3333322 3599999999999999999999973
No 11
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-50 Score=366.21 Aligned_cols=256 Identities=24% Similarity=0.382 Sum_probs=221.3
Q ss_pred hcCCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
...|..-.+||+|+.|.||.+ +..+++.||||++....... .+-+.+|+.+|+..+|+|||+++..|...+.+|+||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 345777788999999999999 45678999999997765543 366889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
|||+||+|.+.+... .+++.++..|++.+++||+|||.+ +|+|||||.+|||++.+|.+||+|||+|..+...
T Consensus 350 Eym~ggsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKT----RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred eecCCCchhhhhhcc----cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence 999999999998766 489999999999999999999999 9999999999999999999999999999999887
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
...+...+||+.|||||+.....|.++.||||||++++||+-|.+||-... +...+.-+.....+.........
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~---PlrAlyLIa~ng~P~lk~~~klS--- 496 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN---PLRALYLIATNGTPKLKNPEKLS--- 496 (550)
T ss_pred cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC---hHHHHHHHhhcCCCCcCCccccC---
Confidence 777888899999999999999999999999999999999999999976533 33344444444444332222221
Q ss_pred HHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..+.+++.+||+.|+++|+|++|+|+||||+.
T Consensus 497 ~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 497 PELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred HHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 24889999999999999999999999999964
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-51 Score=341.11 Aligned_cols=251 Identities=24% Similarity=0.345 Sum_probs=208.4
Q ss_pred CCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeE-EEeeCCe-EEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYG-FCLHKKC-MFLIY 166 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~~-~~lv~ 166 (361)
+|.+.++||+|+||+||++ ...+|..+|.|.++-...+....+....|+.+|++++|||||++++ .+.+++. ++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 4666778999999999999 5678999999999877666666788999999999999999999999 4444444 89999
Q ss_pred EeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCC-CeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 167 KYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIP-SIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~-~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
|+|.+|+|..+++... ....+++..+++++.|++.||.++|+.... .+.||||||.||+++.+|.+||+|||+++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 9999999999987632 334689999999999999999999994321 38999999999999999999999999999998
Q ss_pred CCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 245 SDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 245 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
+........+|||.||+||.+.+..|+.+|||||+||++|||..-++||.... .......+..... ++..+....
T Consensus 180 s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n---~~~L~~KI~qgd~-~~~p~~~YS- 254 (375)
T KOG0591|consen 180 SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN---LLSLCKKIEQGDY-PPLPDEHYS- 254 (375)
T ss_pred chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc---HHHHHHHHHcCCC-CCCcHHHhh-
Confidence 88877888899999999999999999999999999999999999999998652 1222233333322 223322222
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCc
Q 042457 325 DIILVSKIAFACLRSKPKSRPTM 347 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~ 347 (361)
..+..|+..|+..||+.||+.
T Consensus 255 --~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 255 --TDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred --hHHHHHHHHHccCCcccCCCc
Confidence 248889999999999999986
No 13
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-50 Score=351.21 Aligned_cols=259 Identities=27% Similarity=0.452 Sum_probs=208.9
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC--eEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK--CMFL 164 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~l 164 (361)
..++...+.||+|+||.||++... +|...|||.....+... .+.+.+|+.+|++++|||||+++|...... .+++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT--SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh--HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 345667788999999999999765 48999999987764333 577889999999999999999999855544 6999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC-CCCeEEeeecCcccc
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS-KLEAFVADFGVARLL 243 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfg~~~~~ 243 (361)
.|||+++|+|.+++.+.+. .+++..+.++..||++||+|||++ +++||||||+|||++. ++.+||+|||++...
T Consensus 94 ~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 9999999999999988764 589999999999999999999999 9999999999999999 799999999999877
Q ss_pred CCCC---CCccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 244 HSDS---SNRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 244 ~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
.... .......||+.|||||++..+ ....++|||||||++.||+||+.||... .........+......+....
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~~~P~ip~ 246 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGREDSLPEIPD 246 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccCCCCCCCc
Confidence 6311 223346799999999999853 3445999999999999999999999875 222222333332221111111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
. ......+++.+|++.||++|||++++|+|||+++.
T Consensus 247 ~----ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 247 S----LSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred c----cCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 1 11247889999999999999999999999999763
No 14
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-49 Score=359.33 Aligned_cols=259 Identities=23% Similarity=0.365 Sum_probs=218.4
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcch---HHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeCC
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETE---LAFLESFQTEARLLSQIR-HRNIVKLYGFCLHKK 160 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 160 (361)
...++|.+.+.||+|+||.|+.|.. .+|..||+|.+...... ....+.+.+|+.++++++ ||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 4456799999999999999999954 47899999976654111 122456668999999998 999999999999999
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC-CCeEEeeecC
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK-LEAFVADFGV 239 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfg~ 239 (361)
..++||||+.||+|.+++.+.+ ++.+....+++.|++.|++|||++ +|+||||||+|+|+|.+ +++||+|||+
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccc
Confidence 9999999999999999998844 688899999999999999999999 99999999999999999 9999999999
Q ss_pred ccccCCCCCCcccccccccccccccccccc-cC-ccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCC
Q 042457 240 ARLLHSDSSNRTVVAGTHGYIAPELAYTMV-VT-EKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPI 317 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (361)
+.............+||+.|+|||++.+.. |+ .++||||+|++||.|++|+.||++. +.......+.......+.
T Consensus 168 s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~---~~~~l~~ki~~~~~~~p~ 244 (370)
T KOG0583|consen 168 SAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS---NVPNLYRKIRKGEFKIPS 244 (370)
T ss_pred ccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc---cHHHHHHHHhcCCccCCC
Confidence 987753444556678999999999999876 75 7999999999999999999999872 223334445555555554
Q ss_pred CChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 318 DDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
... ...+..|+.+|+..||.+|+|+.+|++||||++
T Consensus 245 ~~~-----S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 245 YLL-----SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CcC-----CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 431 124788999999999999999999999999997
No 15
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-50 Score=356.63 Aligned_cols=265 Identities=21% Similarity=0.328 Sum_probs=216.2
Q ss_pred HHhcCCCCcCeeeecCceeEEEEE-eCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeCC-eE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQ-LPSGKIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGFCLHKK-CM 162 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~ 162 (361)
...++|.+.++||.|.||.||+|+ ..+|..||||+++..-...+. -.-++|+..|++++ ||||+++.+++.+.+ .+
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee-~~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEE-CMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHH-HHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 345678889999999999999995 457899999999876554332 23458999999998 999999999999988 89
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++|||||+ .+|+.+++..+ ..+++..+..|+.||++||+|+|.+ |+.|||+||+|||+..+..+||+|||+|+.
T Consensus 86 ~fVfE~Md-~NLYqLmK~R~--r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 86 YFVFEFMD-CNLYQLMKDRN--RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred eeeHHhhh-hhHHHHHhhcC--CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccc
Confidence 99999995 59999998773 3799999999999999999999999 999999999999999999999999999998
Q ss_pred cCCCCCCccccccccccccccccc-ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCC----
Q 042457 243 LHSDSSNRTVVAGTHGYIAPELAY-TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPI---- 317 (361)
Q Consensus 243 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 317 (361)
+.+.+. .+.++.|..|.|||++. .+.|+.+.|+|++|||++|+.+-++.|.+.++.|.-....+++........
T Consensus 160 v~SkpP-YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 160 VRSKPP-YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred cccCCC-cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence 865443 34567899999999765 678999999999999999999999998877765544444333332111110
Q ss_pred ------------CChhhH-----HHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 318 ------------DDQTVI-----QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 318 ------------~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
...... .......+++.+|+++||.+|||++|.|+||||+.
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~ 296 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQV 296 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccc
Confidence 000111 12345789999999999999999999999999985
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-49 Score=345.19 Aligned_cols=265 Identities=25% Similarity=0.421 Sum_probs=221.0
Q ss_pred HHhcCCCCcCeeeecCceeEEEEE-eCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQ-LPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 164 (361)
...+.|++...||.|..++||+|. .+.++.||||++........ .+.+.+|+..|+.++||||++++..|..+..+|+
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence 445679999999999999999994 56789999999987665544 7889999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
||.||.+|++.+++...-.. .+++..+..|++++++||.|||++ |.+|||+|+.|||++++|.+||+|||.+..+.
T Consensus 102 VmpfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred eehhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 99999999999999864332 489999999999999999999999 99999999999999999999999999876654
Q ss_pred CCCCCc----ccccccccccccccccc--cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCC
Q 042457 245 SDSSNR----TVVAGTHGYIAPELAYT--MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPID 318 (361)
Q Consensus 245 ~~~~~~----~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (361)
...... ....||+.|||||++.. ..|+.|+||||||+...||.+|+.||..+.. -.++...+.+.++.+..
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP---mkvLl~tLqn~pp~~~t 254 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP---MKVLLLTLQNDPPTLLT 254 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh---HHHHHHHhcCCCCCccc
Confidence 433222 44579999999999653 4589999999999999999999999886554 33344455555543322
Q ss_pred C----hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 319 D----QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 319 ~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
. +........+.+++..||++||.+|||+.++|+|+||++
T Consensus 255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~ 298 (516)
T KOG0582|consen 255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKK 298 (516)
T ss_pred ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhh
Confidence 1 112222345889999999999999999999999999986
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-49 Score=354.46 Aligned_cols=258 Identities=24% Similarity=0.370 Sum_probs=219.9
Q ss_pred HHhcCCCCcCeeeecCceeEEEEE-eCCCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQ-LPSGKIVALKKLHHSETE-LAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 162 (361)
...++|.+.+.||+|+|++|++|+ ...++.+|||++.+..-- .....-+..|-+.|.+| .||.|++++-.|++...+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 445679999999999999999995 457899999998654321 11234566788889999 899999999999999999
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
|+|+||+++|+|.++|++.+ .+++.-.+.++.+|+.||+|||++ |||||||||+|||+|+|++++|+|||-++.
T Consensus 150 YFvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred EEEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeecccccc
Confidence 99999999999999999876 699999999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCC-----------C--cccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhh
Q 042457 243 LHSDSS-----------N--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLL 309 (361)
Q Consensus 243 ~~~~~~-----------~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 309 (361)
+..... . ....+||..|.+||++.....+..+|+|+|||++|+|+.|++||....+ ......++
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne---yliFqkI~ 300 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE---YLIFQKIQ 300 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH---HHHHHHHH
Confidence 743211 1 1447899999999999999999999999999999999999999876543 34455666
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 310 DQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.-....+...+. .+.+|+++.|..||.+|+|.+||-+||||..
T Consensus 301 ~l~y~fp~~fp~------~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~ 343 (604)
T KOG0592|consen 301 ALDYEFPEGFPE------DARDLIKKLLVRDPSDRLTSQQIKAHPFFEG 343 (604)
T ss_pred HhcccCCCCCCH------HHHHHHHHHHccCccccccHHHHhhCccccc
Confidence 666655555442 3788999999999999999999999999975
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-49 Score=350.01 Aligned_cols=267 Identities=24% Similarity=0.356 Sum_probs=216.3
Q ss_pred hcCCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--CeEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KCMFL 164 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 164 (361)
.+.|+.+++||+|.||.||+| ...+|+.||+|++...........-..+|+.+|++++||||+++.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 345777888999999999999 456899999999988876666667788999999999999999999998876 68999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
|+|||++ +|..++.... ..++..++..++.|++.||+|+|.+ ++.|||||.+|||||++|.+||+|||+|+.+.
T Consensus 196 VFeYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeecc
Confidence 9999976 8888887654 3699999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCC-cccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCC------
Q 042457 245 SDSSN-RTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSP------ 316 (361)
Q Consensus 245 ~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------ 316 (361)
..... .+..+-|..|.|||++.+ ..|+.+.|+||.||||.||++|++.|....+.++...+..++.......
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 65433 455678999999998886 4699999999999999999999999877665433333322222211100
Q ss_pred --------CC-ChhhHH-----HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCCC
Q 042457 317 --------ID-DQTVIQ-----DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPSL 360 (361)
Q Consensus 317 --------~~-~~~~~~-----~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~~ 360 (361)
.. ...... ......+|+..+|..||.+|.|+.++|+|+||+.+.
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p 407 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEP 407 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCC
Confidence 00 000011 113467899999999999999999999999996543
No 19
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=8e-49 Score=322.74 Aligned_cols=264 Identities=25% Similarity=0.350 Sum_probs=217.5
Q ss_pred cCCCCcCeeeecCceeEEEEE-eCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
.+|...+.||+|.||.||+|+ ..+|+.||||+++..+..........+|++.|+.++|+||+.++++|.+.+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 357778889999999999994 5689999999998876554445678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
||+ .+|+..+++... .++..++..++.++++|++|||.+ .|.||||||.|+|++.+|.+||+|||+++.+....
T Consensus 82 fm~-tdLe~vIkd~~i--~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDKNI--ILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred ecc-ccHHHHhccccc--ccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 995 599999987653 689999999999999999999999 99999999999999999999999999999987766
Q ss_pred CCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC-------------
Q 042457 248 SNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA------------- 313 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------------- 313 (361)
......+.|..|.|||.+.| ..|+...|+||.||++.||+.|.+-|...++.++-....+.+....
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 66555578999999998875 5689999999999999999999988876665443333322222211
Q ss_pred ------CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 314 ------PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 314 ------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
+.+..............+|+.+++..||.+|+|+.|+|+|+||+.
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 111111111112234689999999999999999999999999985
No 20
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-49 Score=357.08 Aligned_cols=263 Identities=25% Similarity=0.435 Sum_probs=218.1
Q ss_pred CcCHHHHHHHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEe
Q 042457 78 RITFEEIIVATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCL 157 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 157 (361)
+.+.++|++..+++.+...||+|+||+||+|.| -|. ||||++.....+.+..+.|..|+..+++-+|.||+-+.|+|.
T Consensus 381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~w-hGd-VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRW-HGD-VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM 458 (678)
T ss_pred CccccccccCHHHhhccceeccccccceeeccc-ccc-eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence 345688899999999999999999999999998 444 999999998888888999999999999999999999999999
Q ss_pred eCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeee
Q 042457 158 HKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADF 237 (361)
Q Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 237 (361)
.+.. .||+.||+|.+|+.+++-... .++..+.+.|+.|||+||.|||.+ +|+|+|||+.||++.++++|||+||
T Consensus 459 ~p~~-AIiTqwCeGsSLY~hlHv~et--kfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDF 532 (678)
T KOG0193|consen 459 NPPL-AIITQWCEGSSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDF 532 (678)
T ss_pred CCce-eeeehhccCchhhhhccchhh--hhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecc
Confidence 9887 999999999999999987664 689999999999999999999999 9999999999999999999999999
Q ss_pred cCccccCCC--CCCccccccccccccccccc---ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc
Q 042457 238 GVARLLHSD--SSNRTVVAGTHGYIAPELAY---TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR 312 (361)
Q Consensus 238 g~~~~~~~~--~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 312 (361)
|++...... ........|...|||||++. ..+|+..+||||||+++|||+||..||.. .. .+..+..+-.+
T Consensus 533 GLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~--~dqIifmVGrG- 608 (678)
T KOG0193|consen 533 GLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QN--RDQIIFMVGRG- 608 (678)
T ss_pred cceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CC--hhheEEEeccc-
Confidence 998754332 22333455788999999886 45789999999999999999999999882 22 11112222222
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 313 APSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
...+............+.+|+..||..++++||++.+||.
T Consensus 609 ~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 609 YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 1112222222334446899999999999999999999986
No 21
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-48 Score=322.04 Aligned_cols=252 Identities=25% Similarity=0.370 Sum_probs=221.6
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|+..+.||.|+||.|.+++.+ +|..+|+|++....- ...+.+...+|..+|+.+.||.++++++.+.+.+.+++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 45778889999999999999765 688999999976643 4455688899999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||.+||-|.+++++.+ +++....+.++.+|+.||+|||+. +|++|||||+|||+|.+|.+||+|||+++.....
T Consensus 124 eyv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred eccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 9999999999999877 699999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
.-+.+||+.|+|||++.+..+..++|.||||+++|||+.|.+||..... ......++......|......
T Consensus 198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~---~~iY~KI~~~~v~fP~~fs~~---- 267 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP---IQIYEKILEGKVKFPSYFSSD---- 267 (355)
T ss_pred ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh---HHHHHHHHhCcccCCcccCHH----
Confidence 4456899999999999999999999999999999999999999875443 455677777777666554443
Q ss_pred HHHHHHHhhhcCCCCCCC-----CCccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSR-----PTMRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~R-----Ps~~eil~hp~~~~ 358 (361)
+.+|+...++.|-.+| +-..+|-.||||+.
T Consensus 268 --~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 268 --AKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKG 302 (355)
T ss_pred --HHHHHHHHHhhhhHhhhcCcCCCccccccCccccc
Confidence 7788889999999999 46679999999986
No 22
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.2e-47 Score=348.26 Aligned_cols=249 Identities=23% Similarity=0.296 Sum_probs=205.4
Q ss_pred CeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCC
Q 042457 95 YCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
+.||+|+||.||++.. .+|+.||+|++..... .......+..|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3599999999999965 4789999999875432 2223456788999999999999999999999999999999999999
Q ss_pred ChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCccc
Q 042457 173 SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252 (361)
Q Consensus 173 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 252 (361)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccc
Confidence 9999987654 589999999999999999999999 9999999999999999999999999998754333333444
Q ss_pred ccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHH
Q 042457 253 VAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKI 332 (361)
Q Consensus 253 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 332 (361)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+... ...+.++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~---~~~~~~~~~~~~~~p~~~------~~~~~~l 225 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEIRFPRTL------SPEAKSL 225 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH---HHHHHHHHcCCCCCCCCC------CHHHHHH
Confidence 5699999999999999999999999999999999999999864322 222222332222222211 1247889
Q ss_pred HhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 333 AFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 333 i~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
+.+||+.||++|| ++.++++||||+.
T Consensus 226 i~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 226 LAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred HHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 9999999999999 8999999999975
No 23
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=8.4e-48 Score=344.94 Aligned_cols=259 Identities=25% Similarity=0.370 Sum_probs=216.4
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
...++|+++..||+|+||+||+++. .+|..+|+|+++.+.. ...+++.+..|-.+|...++|.||+++-.|++.+.+|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 3557899999999999999999954 5799999999998765 3445688999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
|||||.+||++..+|...+ .|++..+..++.+.+.|+..||+. |++||||||+|+|||..|++||+|||++..+
T Consensus 218 LiMEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 9999999999999998776 699999999999999999999999 9999999999999999999999999998543
Q ss_pred CC-----------------------CCC-----Cc-------------------ccccccccccccccccccccCccchh
Q 042457 244 HS-----------------------DSS-----NR-------------------TVVAGTHGYIAPELAYTMVVTEKCDV 276 (361)
Q Consensus 244 ~~-----------------------~~~-----~~-------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv 276 (361)
.. +.. .. ...+|||.|+|||++.+..|+..+|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 21 000 00 01359999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc--CCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCC---ccccc
Q 042457 277 FGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR--APSPIDDQTVIQDIILVSKIAFACLRSKPKSRPT---MRRSF 351 (361)
Q Consensus 277 ~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil 351 (361)
||||||||||+.|.+||..... ......+...+ +..|...... .+..+||.+|+. ||++|.- ++||-
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp---~~T~rkI~nwr~~l~fP~~~~~s----~eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETP---QETYRKIVNWRETLKFPEEVDLS----DEAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhhhccCCCcCccc----HHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 9999999999999999875443 33333343333 2233222222 357889999999 9999985 99999
Q ss_pred cCCCCCC
Q 042457 352 PNPEINP 358 (361)
Q Consensus 352 ~hp~~~~ 358 (361)
+||||+.
T Consensus 444 ~HPfF~~ 450 (550)
T KOG0605|consen 444 KHPFFKG 450 (550)
T ss_pred cCCcccc
Confidence 9999986
No 24
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.1e-48 Score=351.59 Aligned_cols=255 Identities=26% Similarity=0.404 Sum_probs=222.2
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|.+.+.||+|+||.||||+. .+.+.||+|.+.+.......++.+.+|+++++.++||||+.++++|+...+.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 4677788899999999999954 468899999998877777778899999999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+.| +|..+|.... .++++.+..++.++..||.|||+. +|.|||+||.|||++.++.+|++|||+++......
T Consensus 82 ~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred hhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence 9977 9999998776 699999999999999999999999 99999999999999999999999999999887766
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
...+...||+-|||||+..+..|+..+|.||+||++||+++|++||-..+. ......+.......+.... .
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si---~~Lv~~I~~d~v~~p~~~S------~ 225 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI---TQLVKSILKDPVKPPSTAS------S 225 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH---HHHHHHHhcCCCCCccccc------H
Confidence 666677899999999999999999999999999999999999999864332 1223334444443333222 2
Q ss_pred HHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.+..++...|.+||.+|.|-.+++.|||++..
T Consensus 226 ~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 226 SFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred HHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 37788889999999999999999999999864
No 25
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-49 Score=367.97 Aligned_cols=251 Identities=30% Similarity=0.483 Sum_probs=213.7
Q ss_pred cCCCCcCeeeecCceeEEEEEeCC----CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLPS----GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 164 (361)
....+.+.||.|.||+||+|+++- ...||||.++....+. +..+|+.|+.+|.+++||||+++.|+......++|
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytek-qrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEK-QRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHH-HHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEE
Confidence 345677899999999999997752 3479999999876554 46899999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
|+|||+||+|+.+|+.+++ ++++.+..-++++||.||.||.+. ++|||||.++||||+.+..+|++|||+++.+.
T Consensus 708 iTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred EhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecc
Confidence 9999999999999998875 599999999999999999999999 99999999999999999999999999999886
Q ss_pred CCCCCc-ccccc--cccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCCh
Q 042457 245 SDSSNR-TVVAG--THGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQ 320 (361)
Q Consensus 245 ~~~~~~-~~~~g--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (361)
.+.... +...| ..+|.|||.+...+++.++||||||++|||.++ |..||.+.+..+ ....--.+.++|.|++.+
T Consensus 783 dd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd--VIkaIe~gyRLPpPmDCP 860 (996)
T KOG0196|consen 783 DDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--VIKAIEQGYRLPPPMDCP 860 (996)
T ss_pred cCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH--HHHHHHhccCCCCCCCCc
Confidence 665332 22222 469999999999999999999999999999998 999988766422 222222334566777655
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.. +.+|+++||++|-.+||++.||+.+
T Consensus 861 ~a------L~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 861 AA------LYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred HH------HHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 43 8889999999999999999999854
No 26
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.8e-47 Score=339.99 Aligned_cols=258 Identities=23% Similarity=0.273 Sum_probs=206.8
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
.|+..+.||+|+||.||++.. .+|+.||+|.+...... ......+.+|+.+++.++|+|++++++++...+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367788999999999999965 57899999998654322 2223467889999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+|||+++++.++|+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999999888754322 2589999999999999999999999 99999999999999999999999999997653322
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhh-hhcccCCCCCCChhhHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLID-LLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 326 (361)
......|+..|+|||++.+..++.++|||||||++|||++|+.||.............. +.......+... .
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------s 229 (285)
T cd05631 157 -TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKF------S 229 (285)
T ss_pred -eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccC------C
Confidence 22334689999999999999999999999999999999999999975443221111111 111111111111 1
Q ss_pred HHHHHHHhhhcCCCCCCCCC-----ccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPT-----MRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs-----~~eil~hp~~~~ 358 (361)
..+.+|+.+||+.||.+||+ ++++++||||++
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~ 266 (285)
T cd05631 230 EDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKN 266 (285)
T ss_pred HHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence 24788999999999999997 899999999986
No 27
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8e-48 Score=326.23 Aligned_cols=266 Identities=23% Similarity=0.267 Sum_probs=216.2
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee--CCeEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH--KKCMFLI 165 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv 165 (361)
++|+..+.|++|+||.||+|+. .+++.||+|+++........--..++|+.+|.+++|||||.+-.+... -+.+|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 4577788899999999999965 478999999998876544434456799999999999999999888764 3569999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
||||++ +|.+++.+-. .++...+...++.|+++|++|||.+ .|+|||||++|+|++..|.+||+|||+|+.+..
T Consensus 156 Me~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred HHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcC
Confidence 999976 8999988755 3689999999999999999999999 999999999999999999999999999999988
Q ss_pred CCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCC-----
Q 042457 246 DSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD----- 319 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 319 (361)
+....+..+-|..|.|||++.+ ..|+.+.|+||+|||+.|++++++.|...+..++-....+.+..........
T Consensus 230 p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp 309 (419)
T KOG0663|consen 230 PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELP 309 (419)
T ss_pred CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccc
Confidence 8777777788999999998876 5689999999999999999999999887776554443333332211100000
Q ss_pred ------------hh---hHH---HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCCC
Q 042457 320 ------------QT---VIQ---DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPSL 360 (361)
Q Consensus 320 ------------~~---~~~---~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~~ 360 (361)
.. ... ....-.+|+..+|..||.+|.|++|.|+|+||.+..
T Consensus 310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P 368 (419)
T KOG0663|consen 310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP 368 (419)
T ss_pred hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence 00 000 113456889999999999999999999999999864
No 28
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2e-47 Score=341.86 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=209.8
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999764 689999999865432 2223467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++.... .+++.....++.|++.||+|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999997654 588999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ......+.......+....
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~------ 222 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP---FGIYEKILAGKLEFPRHLD------ 222 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCcCCCccCC------
Confidence 2234589999999999988899999999999999999999999875432 2223333333333222211
Q ss_pred HHHHHHHhhhcCCCCCCCCC-----ccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPT-----MRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs-----~~eil~hp~~~~ 358 (361)
..+.+++.+||+.||.+||+ ++++++||||+.
T Consensus 223 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 223 LYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred HHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 24788999999999999995 999999999975
No 29
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.7e-47 Score=346.77 Aligned_cols=252 Identities=23% Similarity=0.322 Sum_probs=210.3
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|.+.+.||+|+||.||+|... +|+.||+|.+..... .....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999764 688999999875432 2233467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999997654 578889999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
. ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+...+
T Consensus 172 ~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~---~~~~~~i~~~~~~~p~~~~------ 239 (329)
T PTZ00263 172 T---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP---FRIYEKILAGRLKFPNWFD------ 239 (329)
T ss_pred c---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH---HHHHHHHhcCCcCCCCCCC------
Confidence 2 234689999999999998899999999999999999999999865332 2223334444333332211
Q ss_pred HHHHHHHhhhcCCCCCCCCC-----ccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPT-----MRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs-----~~eil~hp~~~~ 358 (361)
..+.+++.+||+.||.+||+ ++++++||||++
T Consensus 240 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 240 GRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 13778999999999999997 799999999976
No 30
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.7e-47 Score=343.50 Aligned_cols=247 Identities=23% Similarity=0.327 Sum_probs=203.7
Q ss_pred eeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCCh
Q 042457 97 IGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 97 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 174 (361)
||+|+||.||++... +++.||+|.+..... .......+..|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999764 588999999865321 223346788999999999999999999999999999999999999999
Q ss_pred hhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCccccc
Q 042457 175 FCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254 (361)
Q Consensus 175 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 254 (361)
.+++.... .+++..+..++.|++.||.|||+. +++||||||+|||++.++.++|+|||+++.............
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 99997654 589999999999999999999999 999999999999999999999999999876433333334456
Q ss_pred ccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHh
Q 042457 255 GTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAF 334 (361)
Q Consensus 255 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 334 (361)
||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+...+ ..+.+++.
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~---~~~~~~~~~~~~~~~~~~~------~~~~~li~ 225 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV---NEMYRKILQEPLRFPDGFD------RDAKDLLI 225 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH---HHHHHHHHcCCCCCCCcCC------HHHHHHHH
Confidence 89999999999999999999999999999999999999875332 2222333333322222211 24788999
Q ss_pred hhcCCCCCCCC---CccccccCCCCCC
Q 042457 335 ACLRSKPKSRP---TMRRSFPNPEINP 358 (361)
Q Consensus 335 ~cl~~dP~~RP---s~~eil~hp~~~~ 358 (361)
+||+.||.+|| ++.|+++||||++
T Consensus 226 ~~L~~dp~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 226 GLLSRDPTRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred HHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence 99999999997 4789999999986
No 31
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.3e-47 Score=340.07 Aligned_cols=261 Identities=23% Similarity=0.284 Sum_probs=201.7
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|.+.+.||+|+||.||+|... +++.||+|.++...... ....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-APCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCC-cchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 46888999999999999999654 68899999987543221 13467789999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++ +|.+++..... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~~~-~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 84 YLDS-DLKQYLDNCGN--LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CCCc-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 9975 89888865432 478899999999999999999999 99999999999999999999999999997654433
Q ss_pred CCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc--------------
Q 042457 248 SNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR-------------- 312 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------------- 312 (361)
.......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...................
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 33334567899999998765 568899999999999999999999986543211100000000000
Q ss_pred ----CCCCCCChh---hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 313 ----APSPIDDQT---VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 313 ----~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.+....... .........+++.+||+.||.+|||++|+++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 000000000 00011246789999999999999999999999998
No 32
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6.7e-47 Score=340.57 Aligned_cols=265 Identities=23% Similarity=0.318 Sum_probs=204.3
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
.++|.+.+.||+|+||.||+|... +++.||+|++........ ...+.+|+.+++.++||||+++++++...+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGT-PFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccccc-chhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 467999999999999999999765 688999999875443221 245678999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+. ++|.+++..... .++...+..++.|++.||+|||+. +++|+||||+|||+++++.+||+|||++......
T Consensus 83 e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 83 EYVH-TDLCQYMDKHPG--GLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred ECCC-cCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 9995 678777765432 578899999999999999999999 9999999999999999999999999998765433
Q ss_pred CCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhH-hhhhccc------------
Q 042457 247 SSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIML-IDLLDQR------------ 312 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-~~~~~~~------------ 312 (361)
........++..|+|||++.+ ..++.++||||+||++|||++|+.||............ .......
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 333344568899999998765 45788999999999999999999999754321111000 0000000
Q ss_pred ------CC--CCCCChhhHH---HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 313 ------AP--SPIDDQTVIQ---DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 313 ------~~--~~~~~~~~~~---~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.. .+......+. ....+.+++.+||+.||++|||++|+++||||++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 00 0000000000 01247789999999999999999999999999874
No 33
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=9.1e-47 Score=346.73 Aligned_cols=254 Identities=25% Similarity=0.362 Sum_probs=200.0
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|+..+.||+|+||.||+|... +|+.||||++..... ....+.+.+|+++++.++|+||+++++++...+..++||||
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc-HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 4556778999999999999754 689999999865433 23356788999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+.. ..++..+..++.||+.||+|||+. +++||||||+|||+++++.+||+|||++........
T Consensus 154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 9999986532 356677889999999999999999 999999999999999999999999999987644333
Q ss_pred Ccccccccccccccccccc-----cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhH
Q 042457 249 NRTVVAGTHGYIAPELAYT-----MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVI 323 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
......||..|+|||.+.. ...+.++|||||||++|||++|+.||......+.......+..........
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----- 298 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPA----- 298 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCC-----
Confidence 3334568999999998743 234568999999999999999999997333222111111111111111111
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.....+.+++.+||+.||++|||+.|+++||||.+.
T Consensus 299 ~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 299 TASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 111248899999999999999999999999999875
No 34
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.1e-47 Score=340.07 Aligned_cols=262 Identities=23% Similarity=0.328 Sum_probs=206.0
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|.+.+.||+|+||.||+++.. +++.||+|++..........+.+.+|+.+++.++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36889999999999999999775 57899999987654444445678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|++++++..+..... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEEMPN---GVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 999887765544322 588999999999999999999999 99999999999999999999999999998764322
Q ss_pred C-CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc----------------
Q 042457 248 S-NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD---------------- 310 (361)
Q Consensus 248 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~---------------- 310 (361)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||......+..........
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh
Confidence 2 22334688999999999888899999999999999999999999975432111111111000
Q ss_pred --ccCCCCCCChhh-----HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 311 --QRAPSPIDDQTV-----IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 311 --~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
...+........ ......+.+++.+||+.||++|||++|+++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 000000000000 0012348899999999999999999999999998
No 35
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.9e-47 Score=345.48 Aligned_cols=253 Identities=23% Similarity=0.331 Sum_probs=209.1
Q ss_pred hcCCCCcCeeeecCceeEEEEEeCC--CCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLPS--GKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 164 (361)
.++|.+.+.||+|+||.||+|...+ +..||+|.+..... .....+.+..|+.+++.++||||+++++++...+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3468889999999999999997543 36899999865432 22234678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999997654 588999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 245 SDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 245 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+...+
T Consensus 183 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~---~~~~~~i~~~~~~~p~~~~---- 252 (340)
T PTZ00426 183 TR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP---LLIYQKILEGIIYFPKFLD---- 252 (340)
T ss_pred CC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH---HHHHHHHhcCCCCCCCCCC----
Confidence 32 2234689999999999988899999999999999999999999875432 2223333333332222211
Q ss_pred HHHHHHHHHhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
..+.+++.+|++.||++|+ |++++++||||+.
T Consensus 253 --~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 253 --NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred --HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 1367899999999999995 9999999999975
No 36
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.3e-46 Score=342.66 Aligned_cols=260 Identities=24% Similarity=0.321 Sum_probs=208.0
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
.++|++.+.||+|+||.||++... +|..+|+|.+..... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 467999999999999999999764 688899999876433 233567899999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++.... .+++..+..++.|++.||.|||+.. +++|+||||+|||++.++.++|+|||++......
T Consensus 83 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 83 EHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 9999999999997654 5889999999999999999999852 5999999999999999999999999998765332
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchh----------------------
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIM---------------------- 304 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~---------------------- 304 (361)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 158 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (331)
T cd06649 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRP 235 (331)
T ss_pred --ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccc
Confidence 22334689999999999988999999999999999999999999864321100000
Q ss_pred ---------------------HhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 305 ---------------------LIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 305 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
...+.....+.... ......+.+|+.+||+.||++|||++|+++||||+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 236 PGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPN----GVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred ccccccccccccccchhHHHHHHHHHhCCCcCCCC----ccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 00000000000000 0012347899999999999999999999999999763
No 37
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.6e-47 Score=346.74 Aligned_cols=259 Identities=22% Similarity=0.299 Sum_probs=209.9
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|++.+.||+|+||.||+|... +|+.||+|++..... .......+..|++++..++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999765 588999999875432 1223467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999997654 588999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc--ccCCCCCCChhhHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD--QRAPSPIDDQTVIQ 324 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 324 (361)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.. .....+........
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~ 228 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN---ETWENLKYWKETLQRPVYDDPRFN 228 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH---HHHHHHHhccccccCCCCCccccc
Confidence 223346899999999999889999999999999999999999998754321 11111111 11111111100011
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
....+.+++.+||+.+|.+|||++++++||||++.
T Consensus 229 ~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 229 LSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred cCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 12357889999999999999999999999999863
No 38
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-47 Score=348.60 Aligned_cols=253 Identities=24% Similarity=0.385 Sum_probs=219.4
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccC-cchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHS-ETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
-|++.+.||.|+.|.|-+|+. .+|+.+|||++... .........+.+|+-+|+.+.|||++++++++.+...+|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 367788899999999999965 57999999999766 3333344667899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++|-|++++...+ ++.+.+..++++||+.|+.|+|.. +|+||||||+|+|+|..+++||+|||+|..- .+.
T Consensus 93 yv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe-~~g 165 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLE-VPG 165 (786)
T ss_pred ecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecc-cCC
Confidence 999999999998776 689999999999999999999999 9999999999999999999999999999754 334
Q ss_pred CCcccccccccccccccccccccC-ccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVT-EKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
.-....+|++.|.|||++++.+|. .++||||.|||||.|+||+.||++ .+....+..+..+....|.....
T Consensus 166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD---dNir~LLlKV~~G~f~MPs~Is~----- 237 (786)
T KOG0588|consen 166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD---DNIRVLLLKVQRGVFEMPSNISS----- 237 (786)
T ss_pred ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC---ccHHHHHHHHHcCcccCCCcCCH-----
Confidence 445567899999999999998875 699999999999999999999984 23455667777777766644333
Q ss_pred HHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
+..+|+.+|+..||++|.|++||++|||++.
T Consensus 238 -eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 238 -EAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred -HHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 3778888999999999999999999999975
No 39
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.7e-46 Score=341.35 Aligned_cols=249 Identities=23% Similarity=0.299 Sum_probs=204.0
Q ss_pred CeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCC
Q 042457 95 YCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
+.||+|+||.||++.. .+|+.||+|++..... .......+..|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 3599999999999965 4689999999875422 2233467888999999999999999999999999999999999999
Q ss_pred ChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCccc
Q 042457 173 SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252 (361)
Q Consensus 173 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 252 (361)
+|..++.... .+++.++..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccc
Confidence 9998887654 589999999999999999999999 9999999999999999999999999998754333333344
Q ss_pred ccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHH
Q 042457 253 VAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKI 332 (361)
Q Consensus 253 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 332 (361)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+... ...+.++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~---~~~~~~~~~~~~~~p~~~------~~~~~~l 225 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEDIKFPRTL------SADAKSL 225 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH---HHHHHHhccCCccCCCCC------CHHHHHH
Confidence 5689999999999988899999999999999999999999864332 112222222222222211 1247889
Q ss_pred HhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 333 AFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 333 i~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
+.+||+.||++|| ++.|+++||||+.
T Consensus 226 i~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 226 LSGLLIKDPNKRLGGGPDDAKEIMRHSFFTG 256 (328)
T ss_pred HHHHcCCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 9999999999997 8999999999975
No 40
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.5e-46 Score=340.95 Aligned_cols=249 Identities=23% Similarity=0.301 Sum_probs=204.5
Q ss_pred CeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCC
Q 042457 95 YCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
+.||+|+||.||++.. .+|+.||+|++..... .......+..|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3599999999999965 4689999999875422 2223466778999999999999999999999999999999999999
Q ss_pred ChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCccc
Q 042457 173 SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252 (361)
Q Consensus 173 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 252 (361)
+|..++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++............
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccc
Confidence 9998887654 589999999999999999999999 9999999999999999999999999998754333333344
Q ss_pred ccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHH
Q 042457 253 VAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKI 332 (361)
Q Consensus 253 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 332 (361)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.... ..+.++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---~~~~~~~~~~~~~~p~~~~------~~~~~l 225 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELILMEEIRFPRTLS------PEAKSL 225 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCCCCCCCCC------HHHHHH
Confidence 5689999999999988999999999999999999999999864332 2222222222222222211 247889
Q ss_pred HhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 333 AFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 333 i~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
+.+||+.||.+|| ++.++++||||.+
T Consensus 226 i~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 226 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred HHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence 9999999999998 9999999999975
No 41
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-47 Score=370.49 Aligned_cols=254 Identities=28% Similarity=0.471 Sum_probs=211.5
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeCC--CC----EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLPS--GK----IVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK 160 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 160 (361)
...+..+.+.||+|.||.||.|...+ |. .||||.+....... ...+|.+|..+|++++|||||+++|+|.+..
T Consensus 690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~-~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQ-EVSDFLKEALLMSKFDHPNIVSLIGVCLDSG 768 (1025)
T ss_pred ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHH-HHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence 35667778889999999999997643 33 49999998765543 3688999999999999999999999999999
Q ss_pred eEEEEEEeccCCChhhhhccCCc----cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEee
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDE----AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVAD 236 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~D 236 (361)
..++++|||++|+|..+|++.+. ...++....+.++.|||+|+.||+++ ++|||||.++|+||++...+||+|
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcc
Confidence 99999999999999999998632 34689999999999999999999999 999999999999999999999999
Q ss_pred ecCccccCCCCCCcccc--cccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccC
Q 042457 237 FGVARLLHSDSSNRTVV--AGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRA 313 (361)
Q Consensus 237 fg~~~~~~~~~~~~~~~--~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 313 (361)
||+|+.+.......... .-..+|||||.+..+.++.|+|||||||++||++| |..||......+ ....-...+++
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~--v~~~~~~ggRL 923 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE--VLLDVLEGGRL 923 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH--HHHHHHhCCcc
Confidence 99999665443332221 23468999999999999999999999999999999 999987665422 22223344466
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 314 PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
+.|...+. .+.+++.+||+.+|++||++..|++
T Consensus 924 ~~P~~CP~------~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 924 DPPSYCPE------KLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CCCCCCCh------HHHHHHHHHccCChhhCccHHHHHh
Confidence 65555443 3889999999999999999999986
No 42
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2e-48 Score=350.04 Aligned_cols=240 Identities=29% Similarity=0.493 Sum_probs=202.0
Q ss_pred CCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEecc
Q 042457 91 FDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMR 170 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 170 (361)
+...+-||.|+.|.||+|++ .++.||||+++.-. ..+++.|++|+|+||+.+.|+|.....+|||||||.
T Consensus 126 IsELeWlGSGaQGAVF~Grl-~netVAVKKV~elk---------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 126 ISELEWLGSGAQGAVFLGRL-HNETVAVKKVRELK---------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhhhhccCcccceeeeec-cCceehhHHHhhhh---------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccc
Confidence 34456699999999999999 67889999886432 257899999999999999999999999999999999
Q ss_pred CCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCc
Q 042457 171 RGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR 250 (361)
Q Consensus 171 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 250 (361)
.|-|+..|+..+ .++......|..+||.||.|||.+ .|+|||||+-||||..+..+||+|||-++..... ...
T Consensus 196 ~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STk 268 (904)
T KOG4721|consen 196 QGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STK 268 (904)
T ss_pred cccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-hhh
Confidence 999999999876 688889999999999999999999 9999999999999999999999999998876433 455
Q ss_pred ccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc--CCCCCCChhhHHHHHH
Q 042457 251 TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR--APSPIDDQTVIQDIIL 328 (361)
Q Consensus 251 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 328 (361)
....||..|||||++.+.+.++|.|||||||+||||+||..||.+.+....- .-+-.+. ++.|...+ .-
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII---wGVGsNsL~LpvPstcP------~G 339 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII---WGVGSNSLHLPVPSTCP------DG 339 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE---EeccCCcccccCcccCc------hH
Confidence 5678999999999999999999999999999999999999998876543211 1111121 22222222 23
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
+.-|+++||+..|.+|||+.+|+.|.-+
T Consensus 340 fklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 340 FKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred HHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 6778889999999999999999999544
No 43
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-48 Score=340.91 Aligned_cols=256 Identities=29% Similarity=0.428 Sum_probs=218.2
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
...|.....||+|.||.||+|.. ..++.||+|++.......+ .+.+.+|+.++..++++||.++||.+..+..++++|
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~de-Iediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDE-IEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchh-hHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 34566778899999999999955 4688999999977655433 678899999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
|||.||++.+.|+... .+++..+.-+++++..|+.|||.+ +.+|||||+.|||+..+|.+|++|||.+..+...
T Consensus 91 ey~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HHhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeech
Confidence 9999999999998765 457788888999999999999999 9999999999999999999999999999888777
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
.......+||+.|||||++.+..|+.|+||||||++.+||.+|.+|+....+ ...+.-+-...+|.... +..
T Consensus 165 ~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP---mrvlflIpk~~PP~L~~-----~~S 236 (467)
T KOG0201|consen 165 VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP---MRVLFLIPKSAPPRLDG-----DFS 236 (467)
T ss_pred hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc---ceEEEeccCCCCCcccc-----ccC
Confidence 7667788999999999999988999999999999999999999999876554 22222233333332222 111
Q ss_pred HHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..+.+++..||++||+.|||+.++|+|+|+++
T Consensus 237 ~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 237 PPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred HHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 24888999999999999999999999999976
No 44
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-47 Score=311.39 Aligned_cols=257 Identities=29% Similarity=0.429 Sum_probs=218.5
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
-++|++.+.||+|.||.||.|+.+ ++-.||+|++..+.-. .....++.+|+++-+.++||||+++|+++.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 456889999999999999999654 6778999998765432 22336788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
+||.++|.+...|+..... .++......++.|+|.|+.|+|.. +++||||||+|+|++..+..||+|||-+..-
T Consensus 101 lEya~~gel~k~L~~~~~~-~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~-- 174 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMK-RFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA-- 174 (281)
T ss_pred EEecCCchHHHHHHhcccc-cccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeec--
Confidence 9999999999999854432 688888999999999999999999 9999999999999999999999999988643
Q ss_pred CCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
+...+...+||..|.+||...+..++...|+|++|++.||++.|.+||+... ......++..-....|...+.
T Consensus 175 p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~---~~etYkrI~k~~~~~p~~is~---- 247 (281)
T KOG0580|consen 175 PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS---HSETYKRIRKVDLKFPSTISG---- 247 (281)
T ss_pred CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh---hHHHHHHHHHccccCCcccCh----
Confidence 3556677889999999999999999999999999999999999999998665 233344444444444433222
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
...++|.+|+.++|.+|.+..|+++|||+.+.
T Consensus 248 --~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 248 --GAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred --hHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 37888999999999999999999999999764
No 45
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.4e-46 Score=336.45 Aligned_cols=262 Identities=23% Similarity=0.343 Sum_probs=197.9
Q ss_pred cCCCCcCeeeecCceeEEEEEe--CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC---CCCcceeeeEEEee-----
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL--PSGKIVALKKLHHSETELAFLESFQTEARLLSQI---RHRNIVKLYGFCLH----- 158 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~----- 158 (361)
++|++.+.||+|+||.||+|.. .+|+.||+|.+............+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3688899999999999999975 2468899999875543322234455677766655 69999999999863
Q ss_pred CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 159 KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
....++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 346899999996 589888865432 2488999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCC-
Q 042457 239 VARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPI- 317 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 317 (361)
++...... .......|+..|+|||.+.+..++.++||||||+++|||++|+.||......+......+......+...
T Consensus 156 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 156 LARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred ceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence 99765433 2233446899999999998888999999999999999999999998764432111111110000000000
Q ss_pred ------------CChhhH-----HHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 318 ------------DDQTVI-----QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 318 ------------~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
...... .....+.+++.+||+.||++|||+.|+++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 000000 112346799999999999999999999999998
No 46
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.4e-46 Score=338.77 Aligned_cols=249 Identities=23% Similarity=0.342 Sum_probs=205.0
Q ss_pred CeeeecCceeEEEEEe----CCCCEEEEEEeccCcc--hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 95 YCIGTGGYGSVYRAQL----PSGKIVALKKLHHSET--ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+.||+|+||.||+++. .+++.||+|++..... .......+..|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999965 3578999999875422 122235677899999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++.... .+.+..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999987654 578888999999999999999999 999999999999999999999999999875443333
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIIL 328 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (361)
......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+.... ..
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~---~~~~~~~~~~~~~~~~~~~------~~ 226 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR---KKTIDKILKGKLNLPPYLT------PE 226 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCCCCCCCCC------HH
Confidence 33445689999999999888899999999999999999999999875432 2223333333333222211 24
Q ss_pred HHHHHhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 329 VSKIAFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 329 l~~li~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
+.+++.+||+.||++|| +++++++||||+.
T Consensus 227 ~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 227 ARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred HHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence 78999999999999999 8999999999975
No 47
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6e-47 Score=347.78 Aligned_cols=256 Identities=24% Similarity=0.361 Sum_probs=210.4
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchH-HHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETEL-AFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|.+.+.||+|+||.||+|... +|+.||+|++....... .....+..|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999765 68999999987543211 33467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRKD---VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 9999999999997663 689999999999999999999998 9999999999999999999999999999766443
Q ss_pred C-----------------------------CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcc
Q 042457 247 S-----------------------------SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLS 297 (361)
Q Consensus 247 ~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 297 (361)
. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 3 12233468999999999999999999999999999999999999987544
Q ss_pred cCCcchhHhhhhc--ccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCC-ccccccCCCCCC
Q 042457 298 SFNPKIMLIDLLD--QRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPT-MRRSFPNPEINP 358 (361)
Q Consensus 298 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~eil~hp~~~~ 358 (361)
. ......+.. .....+.... ....+.+++.+|++ ||.+||+ ++++++||||++
T Consensus 235 ~---~~~~~~i~~~~~~~~~p~~~~----~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 235 L---QETYNKIINWKESLRFPPDPP----VSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred H---HHHHHHHhccCCcccCCCCCC----CCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 2 222222322 1111111111 11247888999997 9999999 999999999976
No 48
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.3e-46 Score=338.80 Aligned_cols=252 Identities=23% Similarity=0.351 Sum_probs=202.6
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||++... +++.||+|++..... .......+..|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999764 678999999875422 223345677888888776 899999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|..++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 99998886554 589999999999999999999999 999999999999999999999999999875433333334
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCc------chhHhhhhcccCCCCCCChhhHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNP------KIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
...||..|+|||++.+..++.++||||||+++|||++|+.||........ ......+.......+....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~----- 229 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS----- 229 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCC-----
Confidence 45689999999999999999999999999999999999999964322111 1112222333332222211
Q ss_pred HHHHHHHHhhhcCCCCCCCCCc------cccccCCCCCC
Q 042457 326 IILVSKIAFACLRSKPKSRPTM------RRSFPNPEINP 358 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~------~eil~hp~~~~ 358 (361)
..+.+++.+||+.||++|||+ .++++||||+.
T Consensus 230 -~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 230 -VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred -HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 247789999999999999994 79999999975
No 49
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.8e-46 Score=338.55 Aligned_cols=252 Identities=22% Similarity=0.348 Sum_probs=204.2
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||++... +++.||+|+++.... .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 35999999999999764 688999999975432 223346678899999988 799999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|.+++.... .+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++...........
T Consensus 81 g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 99998886554 589999999999999999999999 999999999999999999999999999875333333334
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCC------cchhHhhhhcccCCCCCCChhhHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFN------PKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
...||..|+|||++.+..++.++|+|||||++|||++|+.||+...... .......+.......+....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----- 229 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLS----- 229 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCC-----
Confidence 4568999999999999999999999999999999999999997433211 11122223333332222211
Q ss_pred HHHHHHHHhhhcCCCCCCCCC------ccccccCCCCCC
Q 042457 326 IILVSKIAFACLRSKPKSRPT------MRRSFPNPEINP 358 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs------~~eil~hp~~~~ 358 (361)
..+.+++.+||+.||.+||| +.++++||||+.
T Consensus 230 -~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 230 -VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred -HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 24788999999999999997 689999999975
No 50
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.8e-46 Score=339.92 Aligned_cols=257 Identities=26% Similarity=0.345 Sum_probs=205.7
Q ss_pred CCCCcCeeeecCceeEEEEEe----CCCCEEEEEEeccCcc--hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL----PSGKIVALKKLHHSET--ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 162 (361)
+|++.+.||+|+||.||+++. .+|+.||+|++..... .....+.+..|+.+++.+ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999864 3688999999865321 222345678899999999 589999999999999999
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999987654 588999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCC-Cccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcch-hHhhhhcccCCCCCCC
Q 042457 243 LHSDSS-NRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKI-MLIDLLDQRAPSPIDD 319 (361)
Q Consensus 243 ~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 319 (361)
...... ......||..|+|||++.+. .++.++|||||||++|||++|+.||.......... ....+.....+.+...
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFI 234 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCC
Confidence 533222 22335689999999998765 47889999999999999999999997543322221 1222222222222111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
...+.+++.+||+.||++|| +++++++||||++
T Consensus 235 ------~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 235 ------GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred ------CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 12478899999999999999 7889999999986
No 51
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.5e-46 Score=338.21 Aligned_cols=249 Identities=24% Similarity=0.366 Sum_probs=203.5
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||++... +++.||+|++..... .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 35999999999999764 588999999875321 122345677888888876 699999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++...........
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence 99999887654 589999999999999999999999 999999999999999999999999999876433333334
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+.... ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---~~~~~~i~~~~~~~~~~~~------~~~~~ 225 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE---DDLFEAILNDEVVYPTWLS------QDAVD 225 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---HHHHHHHhcCCCCCCCCCC------HHHHH
Confidence 45689999999999988899999999999999999999999875432 2223333333322222111 24788
Q ss_pred HHhhhcCCCCCCCCCc------cccccCCCCCC
Q 042457 332 IAFACLRSKPKSRPTM------RRSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RPs~------~eil~hp~~~~ 358 (361)
++.+||+.||.+||++ +++++||||+.
T Consensus 226 li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 226 ILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred HHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 9999999999999998 89999999975
No 52
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1e-46 Score=344.60 Aligned_cols=261 Identities=27% Similarity=0.416 Sum_probs=200.5
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC-----CeEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK-----KCMF 163 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~ 163 (361)
+|++.+.||+|+||.||+|.. .+|+.||||++............+.+|+++++.++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 478889999999999999965 4689999999875433333345688999999999999999999988643 2489
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
+||||+. ++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 68988887554 589999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCC---Ccccccccccccccccccc--cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhh----------
Q 042457 244 HSDSS---NRTVVAGTHGYIAPELAYT--MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDL---------- 308 (361)
Q Consensus 244 ~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---------- 308 (361)
..... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||.............+.
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 33221 1233468999999998865 67889999999999999999999998654321100000000
Q ss_pred -------------hcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 309 -------------LDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 309 -------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.....+.+.. .........+.+++.+||+.||++|||++|+++||||+.
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~ 295 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFS-QKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG 295 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchH-HhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence 0000000000 000001124678999999999999999999999999975
No 53
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.6e-46 Score=338.17 Aligned_cols=252 Identities=23% Similarity=0.350 Sum_probs=203.4
Q ss_pred CCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHH---hcCCCCcceeeeEEEeeCCeEEEE
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLL---SQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
|++.+.||+|+||.||+|... +|+.||||+++.... .....+.+..|..++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567889999999999999664 689999999875431 122234566666554 567899999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+++++|..++... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999888643 589999999999999999999999 999999999999999999999999999875433
Q ss_pred CCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
.........|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+.......+...+
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~---~~~~~~i~~~~~~~p~~~~----- 225 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE---EEVFDSIVNDEVRYPRFLS----- 225 (324)
T ss_pred CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCCCCCC-----
Confidence 33334445689999999999998999999999999999999999999875432 2222333333322222211
Q ss_pred HHHHHHHHhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 326 IILVSKIAFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
..+.+++.+||+.||.+|| ++.++++||||+.
T Consensus 226 -~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 226 -REAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred -HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 2477899999999999999 6889999999976
No 54
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.2e-46 Score=337.30 Aligned_cols=254 Identities=21% Similarity=0.318 Sum_probs=206.8
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCC-CcceeeeEEEeeCCeEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRH-RNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~ 166 (361)
+|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+..|..++..++| ++|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999764 578899999875422 22234667889999999976 56888999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999887654 588999999999999999999999 9999999999999999999999999998754333
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
........||..|+|||++.+..++.++|||||||++|||+||+.||..... ......+.......+....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~~~i~~~~~~~~~~~~------ 225 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE---DELFQSIMEHNVSYPKSLS------ 225 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCCCCCCCCC------
Confidence 3333445689999999999999999999999999999999999999875432 2223333333332222211
Q ss_pred HHHHHHHhhhcCCCCCCCCCc-----cccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTM-----RRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~-----~eil~hp~~~~ 358 (361)
..+.+++.+||+.||.+|++. +++++||||+.
T Consensus 226 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 226 KEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 247789999999999999987 79999999975
No 55
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3e-46 Score=340.39 Aligned_cols=262 Identities=24% Similarity=0.343 Sum_probs=207.6
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
..++|++.+.||+|+||.||++... ++..+|+|.+...... .....+.+|+++++.++|+||+++++++...+..++|
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKP-AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCH-HHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 3578999999999999999999765 6888999988764332 2346788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+++++|.+++.... .+++.....++.+++.||.|||+.. +++|+||||+|||++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 82 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999999997654 5788999999999999999999742 699999999999999999999999999876532
Q ss_pred CCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHh-------------------
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLI------------------- 306 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~------------------- 306 (361)
. ......|+..|+|||.+.+..++.++|||||||++|||++|+.||.............
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (333)
T cd06650 157 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPP 234 (333)
T ss_pred h--ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCc
Confidence 2 1223458899999999988889999999999999999999999986432211000000
Q ss_pred ---------------------hhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 307 ---------------------DLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 307 ---------------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.............. .....+.+|+.+||+.||++|||+.|+++||||+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSG---VFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cchhhhhcccccccccHHHHHHHHhcCCCccCCCC---CcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 00000000000000 011247899999999999999999999999999764
No 56
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.4e-46 Score=340.67 Aligned_cols=249 Identities=24% Similarity=0.327 Sum_probs=204.4
Q ss_pred CeeeecCceeEEEEEe----CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEecc
Q 042457 95 YCIGTGGYGSVYRAQL----PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMR 170 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 170 (361)
+.||+|+||.||++.. .+|+.||+|++............+..|++++++++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5699999999999864 368899999997654333334567789999999999999999999999999999999999
Q ss_pred CCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCc
Q 042457 171 RGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR 250 (361)
Q Consensus 171 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 250 (361)
+|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++..........
T Consensus 82 ~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~ 155 (318)
T cd05582 82 GGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 155 (318)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCce
Confidence 999999986543 589999999999999999999999 99999999999999999999999999987654433333
Q ss_pred ccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHH
Q 042457 251 TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVS 330 (361)
Q Consensus 251 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 330 (361)
....|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ......+.......+...+ ..+.
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~---~~~~~~i~~~~~~~p~~~~------~~~~ 226 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR---KETMTMILKAKLGMPQFLS------PEAQ 226 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH---HHHHHHHHcCCCCCCCCCC------HHHH
Confidence 345689999999999888889999999999999999999999875432 2222333333332222111 2477
Q ss_pred HHHhhhcCCCCCCCCC-----ccccccCCCCCC
Q 042457 331 KIAFACLRSKPKSRPT-----MRRSFPNPEINP 358 (361)
Q Consensus 331 ~li~~cl~~dP~~RPs-----~~eil~hp~~~~ 358 (361)
+++.+||+.||++||| +.++++||||+.
T Consensus 227 ~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 227 SLLRALFKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred HHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 8999999999999999 556999999975
No 57
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.6e-46 Score=339.93 Aligned_cols=249 Identities=22% Similarity=0.295 Sum_probs=203.3
Q ss_pred CeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCC
Q 042457 95 YCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
+.||+|+||.||++.. .+|+.||+|.+..... .......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3599999999999965 4789999999875422 1223456778999999999999999999999999999999999999
Q ss_pred ChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 173 SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHY-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 173 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
+|..++.... .+++..+..++.|++.||+|||+ . +++||||||+|||++.++.+||+|||+++..........
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (325)
T cd05594 81 ELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 154 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc
Confidence 9998887654 58999999999999999999997 6 999999999999999999999999999875433333334
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...||..|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.... ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~---~~~~~~i~~~~~~~p~~~~------~~~~~ 225 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEIRFPRTLS------PEAKS 225 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH---HHHHHHHhcCCCCCCCCCC------HHHHH
Confidence 45689999999999988999999999999999999999999864332 1222222222222222211 24788
Q ss_pred HHhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 332 IAFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
++.+||+.||++|+ ++.++++||||+.
T Consensus 226 li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 257 (325)
T cd05594 226 LLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAG 257 (325)
T ss_pred HHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCC
Confidence 99999999999997 9999999999985
No 58
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.5e-46 Score=330.35 Aligned_cols=253 Identities=25% Similarity=0.307 Sum_probs=202.7
Q ss_pred eeecCceeEEEEEeC-CCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCCh
Q 042457 97 IGTGGYGSVYRAQLP-SGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 97 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 174 (361)
||+|+||+||++... +|+.||+|.+...... ....+.+..|+.+++.++|+||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999654 6889999998654322 22345677899999999999999999999999999999999999999
Q ss_pred hhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcccc
Q 042457 175 FCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253 (361)
Q Consensus 175 ~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 253 (361)
..++.... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.............
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 88875422 233689999999999999999999999 99999999999999999999999999997665443333445
Q ss_pred cccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcc-hhHhhhhcccCCCCCCChhhHHHHHHHHHH
Q 042457 254 AGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPK-IMLIDLLDQRAPSPIDDQTVIQDIILVSKI 332 (361)
Q Consensus 254 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 332 (361)
.||..|+|||.+.+..++.++||||||+++|||++|+.||......... .............+.. ....+.++
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l 231 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDK------FSPASKSF 231 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCccc------CCHHHHHH
Confidence 6899999999999999999999999999999999999998754322111 1111222211111111 12247889
Q ss_pred HhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 333 AFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 333 i~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
+.+||+.||++|| |++++++||||++
T Consensus 232 i~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 232 CEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred HHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 9999999999999 7789999999976
No 59
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.2e-46 Score=337.35 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=204.0
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||+|+.. +++.||+|++..... .....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 35999999999999764 578999999875422 222345677888888866 799999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
++|..++.... .+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++...........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence 99998887654 588999999999999999999999 999999999999999999999999999876543333344
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...||..|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+...+ ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~---~~~~~~i~~~~~~~p~~~~------~~~~~ 225 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE---DDLFESILHDDVLYPVWLS------KEAVS 225 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCCCCCCCCC------HHHHH
Confidence 45689999999999988999999999999999999999999875432 2233333333332222211 24788
Q ss_pred HHhhhcCCCCCCCC-------CccccccCCCCCC
Q 042457 332 IAFACLRSKPKSRP-------TMRRSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RP-------s~~eil~hp~~~~ 358 (361)
++.+||+.||++|| +++++++||||+.
T Consensus 226 ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 226 ILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred HHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 99999999999999 8999999999975
No 60
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=6.2e-46 Score=342.40 Aligned_cols=257 Identities=23% Similarity=0.334 Sum_probs=201.7
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|++.+.||+|+||+||++... +++.||+|++..... .......+..|+.++..++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999654 688999999875432 2233467888999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999997654 589999999999999999999999 9999999999999999999999999998754321
Q ss_pred CC-----------------------------------CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCC
Q 042457 247 SS-----------------------------------NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRH 291 (361)
Q Consensus 247 ~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~ 291 (361)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 10 0112468999999999999999999999999999999999999
Q ss_pred CCCCcccCCcchhHhhhhcc--cCCCCCCChhhHHHHHHHHHHHhhhcC--CCCCCCCCccccccCCCCCC
Q 042457 292 PGDLLSSFNPKIMLIDLLDQ--RAPSPIDDQTVIQDIILVSKIAFACLR--SKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 292 p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~eil~hp~~~~ 358 (361)
||..... ......+... ....+...... ..+.+++.+++. .++..||+++||++||||+.
T Consensus 235 Pf~~~~~---~~~~~~i~~~~~~~~~p~~~~~s----~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~ 298 (363)
T cd05628 235 PFCSETP---QETYKKVMNWKETLIFPPEVPIS----EKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEG 298 (363)
T ss_pred CCCCCCH---HHHHHHHHcCcCcccCCCcCCCC----HHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCC
Confidence 9975432 2222223221 11111111111 124555655443 34446799999999999975
No 61
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-46 Score=337.55 Aligned_cols=261 Identities=25% Similarity=0.355 Sum_probs=210.0
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
.+.....+.++||+|.||.|.++....+..||||.++....... ..+|.+|+++|.+++||||++++|+|..++.+++|
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~-r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI 613 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNA-RNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMI 613 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhH-HHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHH
Confidence 45566677889999999999999998889999999987665433 57899999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
+|||++|+|.+++..+.... ..-....+|+.||+.||+||.+. ++|||||.++|+|+|+++++||+|||+++.+..
T Consensus 614 ~EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred HHHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccccccc
Confidence 99999999999998764322 45566788999999999999999 999999999999999999999999999997765
Q ss_pred CCCCc--ccccccccccccccccccccCccchhhhHHHHHHHHHh--CCCCCCCcccCCcchhHhhhhcccCCCCCCChh
Q 042457 246 DSSNR--TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM--GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQT 321 (361)
Q Consensus 246 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (361)
..... ...+-..+|||||.+..++++.++|||+||+++||+++ ...||+...+.+...............-. ...
T Consensus 690 g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~-l~~ 768 (807)
T KOG1094|consen 690 GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV-LSR 768 (807)
T ss_pred CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee-ccC
Confidence 54432 22345689999999999999999999999999999876 67898766554333333333332211000 000
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 322 VIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 322 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
+.-....+.+++..||..|.++|||++++-.
T Consensus 769 P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 769 PPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred CCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 1112234789999999999999999999843
No 62
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-47 Score=346.78 Aligned_cols=260 Identities=25% Similarity=0.414 Sum_probs=210.5
Q ss_pred HHHHHHHhcCCCCcCeeeecCceeEEEEEeCC--C--CE-EEEEEeccCc-chHHHHHHHHHHHHHHhcCCCCcceeeeE
Q 042457 81 FEEIIVATEDFDIKYCIGTGGYGSVYRAQLPS--G--KI-VALKKLHHSE-TELAFLESFQTEARLLSQIRHRNIVKLYG 154 (361)
Q Consensus 81 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~--~--~~-vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 154 (361)
.+.|+...++..+.++||+|+||.||+|++.. + .. ||||..+... .......+|.+|+++|++++|||||+++|
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 34566667778888999999999999996643 2 23 8999998633 45566789999999999999999999999
Q ss_pred EEeeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEE
Q 042457 155 FCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFV 234 (361)
Q Consensus 155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl 234 (361)
++.....+++|||+|.||+|.++|++... .++..++.+++.+.|.||+|||+. +++||||.++|+|++.++.+||
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKI 303 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKI 303 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEe
Confidence 99999999999999999999999998764 589999999999999999999999 9999999999999999999999
Q ss_pred eeecCccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccC
Q 042457 235 ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRA 313 (361)
Q Consensus 235 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 313 (361)
+|||+++.-...........-..+|+|||.+....++.++|||||||++||+++ |..||..... ......+.....
T Consensus 304 SDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~---~~v~~kI~~~~~ 380 (474)
T KOG0194|consen 304 SDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN---YEVKAKIVKNGY 380 (474)
T ss_pred CccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH---HHHHHHHHhcCc
Confidence 999998765311111111124579999999999999999999999999999999 8999876543 233344433332
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 314 PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
..+... .....+..++.+||..+|++||||.++.+
T Consensus 381 r~~~~~----~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 381 RMPIPS----KTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred cCCCCC----CCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 222221 12224777888999999999999998763
No 63
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4e-46 Score=344.02 Aligned_cols=256 Identities=24% Similarity=0.346 Sum_probs=206.5
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|++.+.||+|+||.||+++.. +|+.||||++..... .......+..|+.+++.++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888999999999999999764 689999999975432 2233466888999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.++|+|||++..+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999987654 589999999999999999999999 9999999999999999999999999998754321
Q ss_pred CC--------------------------------------CcccccccccccccccccccccCccchhhhHHHHHHHHHh
Q 042457 247 SS--------------------------------------NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM 288 (361)
Q Consensus 247 ~~--------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t 288 (361)
.. ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 10 0012358999999999998899999999999999999999
Q ss_pred CCCCCCCcccCCcchhHhhhhcccC--CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCC---ccccccCCCCCC
Q 042457 289 GRHPGDLLSSFNPKIMLIDLLDQRA--PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPT---MRRSFPNPEINP 358 (361)
Q Consensus 289 g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil~hp~~~~ 358 (361)
|+.||..... ......+..... ..+.... ....+.+++.+|+. +|.+|++ +.|+++||||+.
T Consensus 235 G~~Pf~~~~~---~~~~~~i~~~~~~~~~~~~~~----~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~ 301 (364)
T cd05599 235 GYPPFCSDNP---QETYRKIINWKETLQFPDEVP----LSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKG 301 (364)
T ss_pred CCCCCCCCCH---HHHHHHHHcCCCccCCCCCCC----CCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 9999875432 122222222221 1111110 11246788889996 9999998 999999999975
No 64
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.4e-46 Score=343.59 Aligned_cols=256 Identities=20% Similarity=0.299 Sum_probs=202.4
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
.|.+.+.||+|+||+||+|.. .+++.||+|++..... .....+.+..|+.+++.++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578889999999999999965 4688999999975432 22345678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999987654 588889999999999999999999 99999999999999999999999999975431100
Q ss_pred C-----------------------------------------------CcccccccccccccccccccccCccchhhhHH
Q 042457 248 S-----------------------------------------------NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFG 280 (361)
Q Consensus 248 ~-----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG 280 (361)
. ......||..|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0 01124689999999999888899999999999
Q ss_pred HHHHHHHhCCCCCCCcccCCcchhHhhhhc--ccCCCCCCChhhHHHHHHHHHHHhh--hcCCCCCCCCCccccccCCCC
Q 042457 281 VVALEVLMGRHPGDLLSSFNPKIMLIDLLD--QRAPSPIDDQTVIQDIILVSKIAFA--CLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 281 ~~l~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~eil~hp~~ 356 (361)
|++|||++|+.||..... ......+.. .....+..... ...+.+++.+ |+..+|..||++.|+++||||
T Consensus 236 ~il~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~----s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f 308 (381)
T cd05626 236 VILFEMLVGQPPFLAPTP---TETQLKVINWENTLHIPPQVKL----SPEAVDLITKLCCSAEERLGRNGADDIKAHPFF 308 (381)
T ss_pred hHHHHHHhCCCCCcCCCH---HHHHHHHHccccccCCCCCCCC----CHHHHHHHHHHccCcccccCCCCHHHHhcCccc
Confidence 999999999999975432 111222221 11111111111 1135667766 556677779999999999999
Q ss_pred CC
Q 042457 357 NP 358 (361)
Q Consensus 357 ~~ 358 (361)
++
T Consensus 309 ~~ 310 (381)
T cd05626 309 SE 310 (381)
T ss_pred CC
Confidence 75
No 65
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-46 Score=340.60 Aligned_cols=257 Identities=23% Similarity=0.375 Sum_probs=219.2
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 162 (361)
..-++|.+.+.||+|.||+|+++..+ +++.+|||++++..- ..+..+..+.|.+++... +||.+++++++++..+++
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 44577999999999999999999765 578999999987753 334467888899988877 599999999999999999
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
|.||||+.||++..+.+.. .+++..+..++..|+.||.|||++ +|++||||.+|||+|.+|.+||+|||+++.
T Consensus 445 ~fvmey~~Ggdm~~~~~~~----~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHTD----VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEecCCCcEEEEEecc----cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccc
Confidence 9999999999955554433 599999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhh
Q 042457 243 LHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTV 322 (361)
Q Consensus 243 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (361)
.-.......+.+||+.|||||++.+..|+.+.|.|||||+||||+.|..||...+. +.....++......|...+.
T Consensus 518 ~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE---ee~FdsI~~d~~~yP~~ls~- 593 (694)
T KOG0694|consen 518 GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE---EEVFDSIVNDEVRYPRFLSK- 593 (694)
T ss_pred cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHhcCCCCCCCcccH-
Confidence 65555667778999999999999999999999999999999999999999875432 34445555555554444332
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCc-----cccccCCCCCC
Q 042457 323 IQDIILVSKIAFACLRSKPKSRPTM-----RRSFPNPEINP 358 (361)
Q Consensus 323 ~~~~~~l~~li~~cl~~dP~~RPs~-----~eil~hp~~~~ 358 (361)
+...+++++|.++|++|.-+ ++|-+||||+.
T Consensus 594 -----ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~ 629 (694)
T KOG0694|consen 594 -----EAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRS 629 (694)
T ss_pred -----HHHHHHHHHhccCcccccCCCCCCchhhhhCCcccc
Confidence 36788889999999999965 78999999985
No 66
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.3e-45 Score=334.25 Aligned_cols=249 Identities=23% Similarity=0.329 Sum_probs=203.7
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||++... +++.||+|+++.... .......+..|..+++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 35999999999999765 578999999875432 222345677888888877 799999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|..++.... .+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 99998887654 589999999999999999999999 999999999999999999999999999875433333333
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...|+..|+|||++.+..++.++|||||||++|+|++|+.||..... ......+.......+... ...+.+
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~---~~~~~~i~~~~~~~~~~~------~~~~~~ 225 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE---DELFQSILEDEVRYPRWL------SKEAKS 225 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH---HHHHHHHHcCCCCCCCcC------CHHHHH
Confidence 45689999999999999999999999999999999999999875432 222223333322222211 124789
Q ss_pred HHhhhcCCCCCCCCCc-----cccccCCCCCC
Q 042457 332 IAFACLRSKPKSRPTM-----RRSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RPs~-----~eil~hp~~~~ 358 (361)
++.+||+.||.+|||+ .++++||||+.
T Consensus 226 li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 226 ILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred HHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 9999999999999999 99999999976
No 67
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.7e-45 Score=333.03 Aligned_cols=249 Identities=23% Similarity=0.354 Sum_probs=199.8
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhc-CCCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQ-IRHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||+|... +++.||+|.++.... .....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 35999999999999764 578899999875422 11223445566666664 4899999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|..++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...........
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence 99999887654 588999999999999999999999 999999999999999999999999999976543333344
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+.......+.... ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---~~~~~~i~~~~~~~~~~~~------~~~~~ 225 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---DELFDSILNDRPHFPRWIS------KEAKD 225 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCCCCCCCCC------HHHHH
Confidence 45689999999999988899999999999999999999999875432 2222233332222222111 23778
Q ss_pred HHhhhcCCCCCCCCCcc-ccccCCCCCC
Q 042457 332 IAFACLRSKPKSRPTMR-RSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RPs~~-eil~hp~~~~ 358 (361)
++.+||+.||.+||++. ++++||||+.
T Consensus 226 ll~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 226 CLSKLFERDPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred HHHHHccCCHHHcCCChHHHHcCcccCC
Confidence 99999999999999975 8889999975
No 68
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.1e-45 Score=337.88 Aligned_cols=257 Identities=25% Similarity=0.399 Sum_probs=200.4
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEe------CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEe
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQL------PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCL 157 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 157 (361)
.+..++|.+.+.||+|+||.||+|.. .+++.||+|++...... .....+..|+.++..+ +||||++++++|.
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATA-SEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccch-HHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 35567899999999999999999964 23568999998754332 2346788999999999 8999999999988
Q ss_pred eCC-eEEEEEEeccCCChhhhhccCCc-----------------------------------------------------
Q 042457 158 HKK-CMFLIYKYMRRGSLFCVLRNDDE----------------------------------------------------- 183 (361)
Q Consensus 158 ~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------- 183 (361)
..+ ..+++|||+++|+|.+++.....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 654 58999999999999999865321
Q ss_pred ------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC--cccccc
Q 042457 184 ------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAG 255 (361)
Q Consensus 184 ------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g 255 (361)
...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ .....+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCC
Confidence 12478889999999999999999999 9999999999999999999999999999765332221 122345
Q ss_pred cccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHh
Q 042457 256 THGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAF 334 (361)
Q Consensus 256 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 334 (361)
+..|+|||++.+..++.++||||||+++|||++ |..||...... ................. .....+.+++.
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~l~~li~ 311 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--EEFCQRLKDGTRMRAPE-----NATPEIYRIML 311 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHHHhcCCCCCCCC-----CCCHHHHHHHH
Confidence 678999999998899999999999999999997 99998754321 11112222221111111 11124789999
Q ss_pred hhcCCCCCCCCCcccccc
Q 042457 335 ACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 335 ~cl~~dP~~RPs~~eil~ 352 (361)
+||+.||++|||+.|+++
T Consensus 312 ~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 312 ACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHccCChhhCcCHHHHHH
Confidence 999999999999999875
No 69
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.9e-45 Score=333.95 Aligned_cols=254 Identities=21% Similarity=0.322 Sum_probs=207.0
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 166 (361)
+|.+.+.||+|+||.||+|... +++.||+|.+..... .....+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999665 578999999875432 122235566788888777 5899999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999998887654 588999999999999999999999 9999999999999999999999999998754433
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
........||+.|+|||++.+..++.++|||||||++|||+||+.||..... ......+.......+....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---~~~~~~i~~~~~~~p~~~s------ 225 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQSIMEHNVAYPKSMS------ 225 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCCCcCC------
Confidence 3334445689999999999999999999999999999999999999875432 2233334433333222211
Q ss_pred HHHHHHHhhhcCCCCCCCCCc-----cccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTM-----RRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~-----~eil~hp~~~~ 358 (361)
..+.+++.+|++.||.+|++. .++++||||+.
T Consensus 226 ~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 226 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred HHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 247889999999999999985 79999999975
No 70
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-46 Score=328.17 Aligned_cols=252 Identities=26% Similarity=0.441 Sum_probs=196.4
Q ss_pred hcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhc--CCCCcceeeeEEEeeCC----e
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQ--IRHRNIVKLYGFCLHKK----C 161 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~ 161 (361)
-....+...+|+|+||.||+|++ +++.||||++...+ .+.|.+|-++.+. ++|+||+++++.-.... .
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~~-----kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQE-----KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc-cCceeEEEecCHHH-----HHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 34455667799999999999999 66999999997543 4778888888875 58999999999887665 7
Q ss_pred EEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCC------CCCeEEeCCCCCCeeeCCCCCeEEe
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDC------IPSIVHRDISSNNILLNSKLEAFVA 235 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~------~~~i~H~dlk~~Nill~~~~~~kl~ 235 (361)
++||++|.++|+|.++|..+ .++|....+++..+++||+|||+.. .|+|+|||||++||||.+|+++.|+
T Consensus 283 ywLVt~fh~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 99999999999999999877 5999999999999999999999764 4789999999999999999999999
Q ss_pred eecCccccCCCCC--Cccccccccccccccccccccc------CccchhhhHHHHHHHHHhCCCCCC--Cccc-------
Q 042457 236 DFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVV------TEKCDVFGFGVVALEVLMGRHPGD--LLSS------- 298 (361)
Q Consensus 236 Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~------~~~~Dv~slG~~l~el~tg~~p~~--~~~~------- 298 (361)
|||++..+..... .....+||.+|||||++.+... -.+.||||+|.+||||++...-+. ...+
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 9999988764433 2334679999999999876432 237899999999999998764432 1111
Q ss_pred ---CC---cchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccc
Q 042457 299 ---FN---PKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRR 349 (361)
Q Consensus 299 ---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 349 (361)
.. .+.....+.+...|...+.......+..+++.+..||..||+.|.|+.=
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~C 495 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGC 495 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHH
Confidence 01 1111222233333333333333455667999999999999999999863
No 71
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6e-46 Score=342.84 Aligned_cols=261 Identities=23% Similarity=0.324 Sum_probs=208.1
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
...++|.+.+.||+|+||.||+++.. +++.||+|.+..... .....+.+..|+.+++.++||||+++++++.+.+..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 44567999999999999999999664 688999999864322 1222355778999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
+||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 120 lv~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 999999999999998654 478888899999999999999999 9999999999999999999999999999766
Q ss_pred CCCCC-Cccccccccccccccccccc----ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCC
Q 042457 244 HSDSS-NRTVVAGTHGYIAPELAYTM----VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPID 318 (361)
Q Consensus 244 ~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (361)
..... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ......+..........
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~---~~~~~~i~~~~~~~~~~ 269 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---VGTYSKIMDHKNSLTFP 269 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH---HHHHHHHHcCCCcCCCC
Confidence 43322 22345689999999988643 478899999999999999999999875432 22223333322111111
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCC--CCCccccccCCCCCC
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKS--RPTMRRSFPNPEINP 358 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~hp~~~~ 358 (361)
.. ......+.+++.+||+.+|.+ |||+.|+++||||+.
T Consensus 270 ~~--~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 270 DD--IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred Cc--CCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 10 011124788999999999988 999999999999976
No 72
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2e-45 Score=332.66 Aligned_cols=249 Identities=22% Similarity=0.324 Sum_probs=199.9
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhc-CCCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQ-IRHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||+|... +|+.||+|.++.... .....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999765 688999999875421 11223556677777775 4899999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|..++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.++|+|||+++..........
T Consensus 81 g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 99999887643 588999999999999999999999 999999999999999999999999999875433333334
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...||..|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+.... ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~---~~~~~~~~~~~~~~~~~~~------~~~~~ 225 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE---DELFESIRVDTPHYPRWIT------KESKD 225 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCCCCCC------HHHHH
Confidence 45689999999999999999999999999999999999999875432 1222222222222221111 24778
Q ss_pred HHhhhcCCCCCCCCCc-cccccCCCCCC
Q 042457 332 IAFACLRSKPKSRPTM-RRSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RPs~-~eil~hp~~~~ 358 (361)
++.+||+.||++||++ +++++||||+.
T Consensus 226 li~~~l~~dP~~R~~~~~~~~~h~~f~~ 253 (316)
T cd05620 226 ILEKLFERDPTRRLGVVGNIRGHPFFKT 253 (316)
T ss_pred HHHHHccCCHHHcCCChHHHHcCCCcCC
Confidence 9999999999999998 58999999976
No 73
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.1e-45 Score=327.88 Aligned_cols=258 Identities=23% Similarity=0.268 Sum_probs=206.8
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
+|++.+.||+|+||.||++.. .+++.||+|.+...... ......+.+|+.+++.++|+||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 477889999999999999975 46899999998754322 2223557789999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++|+|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 9999999988865322 2589999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhh-hhcccCCCCCCChhhHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLID-LLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 326 (361)
......|+..|+|||++.+..++.++||||+|+++||+++|+.||.............. +.......+. ...
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 229 (285)
T cd05605 157 -TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSE------KFS 229 (285)
T ss_pred -ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCc------ccC
Confidence 22334688999999999888899999999999999999999999975433211111111 1111111111 112
Q ss_pred HHHHHHHhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
..+.+++.+||+.||++|| +++++++||||.+
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 230 EAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred HHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 2478999999999999999 8889999999986
No 74
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-45 Score=340.67 Aligned_cols=256 Identities=21% Similarity=0.271 Sum_probs=201.0
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
..+|++.+.||+|+||.||++.. .+++.||+|.... ..+.+|++++++++||||+++++++......++++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 46799999999999999999965 4688999997532 34678999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
|++. ++|..++.... .+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 163 e~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 163 PRYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred ecCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 9995 68888876543 588999999999999999999999 9999999999999999999999999998654322
Q ss_pred C-CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCC----cchhHhhhhc-----------
Q 042457 247 S-SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFN----PKIMLIDLLD----------- 310 (361)
Q Consensus 247 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----~~~~~~~~~~----------- 310 (361)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.|+-.....+ ....+..+..
T Consensus 236 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 236 NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 1 22233568999999999998899999999999999999999998764322111 0000111100
Q ss_pred ---------------ccCCCCCCC---hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 311 ---------------QRAPSPIDD---QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 311 ---------------~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.....+... .........+.+|+.+||+.||++|||++|+|+||||++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~ 381 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD 381 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence 000000000 001122345789999999999999999999999999986
No 75
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.8e-45 Score=331.60 Aligned_cols=249 Identities=23% Similarity=0.352 Sum_probs=199.8
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhc-CCCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQ-IRHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||+|... +++.||+|.++.... .....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999764 578999999875421 11223456677777775 4899999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|.+++.... .+++.++..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++...........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 81 GDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 99999987643 588999999999999999999999 999999999999999999999999999875433333333
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...||..|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+... ...+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~~~~i~~~~~~~~~~~------~~~~~~ 225 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE---EELFQSIRMDNPCYPRWL------TREAKD 225 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCCccC------CHHHHH
Confidence 45689999999999988899999999999999999999999875432 122222222222111111 124778
Q ss_pred HHhhhcCCCCCCCCCcc-ccccCCCCCC
Q 042457 332 IAFACLRSKPKSRPTMR-RSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RPs~~-eil~hp~~~~ 358 (361)
++.+||+.||++||++. ++++||||++
T Consensus 226 li~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05619 226 ILVKLFVREPERRLGVKGDIRQHPFFRE 253 (316)
T ss_pred HHHHHhccCHhhcCCChHHHHcCcccCC
Confidence 99999999999999997 8999999976
No 76
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.9e-46 Score=328.73 Aligned_cols=258 Identities=28% Similarity=0.460 Sum_probs=209.0
Q ss_pred CCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEec
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
|++.+.||+|+||+||++... +++.+|+|.+...............|+..+++++|+||+++++++......+++||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567889999999999999765 4568999999988766554455567999999999999999999999999999999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 249 (361)
++++|.+++.... .+++..+..++.|+++||.+||+. +++|+||||+||++++++.++|+|||.+.........
T Consensus 81 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQKNK---PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNEN 154 (260)
T ss_dssp TTEBHHHHHHHHS---SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE
T ss_pred ccccccccccccc---cccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 9999999998332 689999999999999999999999 9999999999999999999999999999765333334
Q ss_pred ccccccccccccccccc-ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHH
Q 042457 250 RTVVAGTHGYIAPELAY-TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIIL 328 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (361)
.....++..|+|||.+. +..++.++||||+|+++|+|++|..||......+..................... .....
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 232 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSR--EKSEE 232 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHT--TSHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccc--hhHHH
Confidence 44556889999999988 8889999999999999999999999988652212222222222211111111000 00135
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
+.+++.+||+.||++|||+.++++||||
T Consensus 233 l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 233 LRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 8999999999999999999999999997
No 77
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.3e-45 Score=342.56 Aligned_cols=255 Identities=20% Similarity=0.299 Sum_probs=201.9
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
.|...+.||+|+||.||+|.. .+++.||+|++..... .......+.+|+.+++.++|+||+++++.+...+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 578899999999999999965 4688999999875432 22335678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999987654 578889999999999999999999 99999999999999999999999999975321100
Q ss_pred -----------------------------------------------CCcccccccccccccccccccccCccchhhhHH
Q 042457 248 -----------------------------------------------SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFG 280 (361)
Q Consensus 248 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG 280 (361)
.......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 001123589999999999998999999999999
Q ss_pred HHHHHHHhCCCCCCCcccCCcchhHhhhhccc--CCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCC---ccccccCCC
Q 042457 281 VVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR--APSPIDDQTVIQDIILVSKIAFACLRSKPKSRPT---MRRSFPNPE 355 (361)
Q Consensus 281 ~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil~hp~ 355 (361)
|++|||++|+.||..... ......+.... ...+..... ...+.+++.+|+ .+|.+|++ +.|+++|||
T Consensus 236 vil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p~~~~~----s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~ 307 (382)
T cd05625 236 VILYEMLVGQPPFLAQTP---LETQMKVINWQTSLHIPPQAKL----SPEASDLIIKLC-RGPEDRLGKNGADEIKAHPF 307 (382)
T ss_pred HHHHHHHhCCCCCCCCCH---HHHHHHHHccCCCcCCCCcccC----CHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCC
Confidence 999999999999975432 11222222211 111111111 113566666665 59999997 999999999
Q ss_pred CCC
Q 042457 356 INP 358 (361)
Q Consensus 356 ~~~ 358 (361)
|+.
T Consensus 308 f~~ 310 (382)
T cd05625 308 FKT 310 (382)
T ss_pred cCC
Confidence 976
No 78
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.7e-45 Score=332.96 Aligned_cols=249 Identities=23% Similarity=0.303 Sum_probs=200.1
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHH-HHhcCCCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEAR-LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||+||+|... +|+.||+|++..... .......+..|.. +++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 35999999999999764 689999999865432 1112234445544 56789999999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|..++.... .+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++...........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 99999987654 588999999999999999999999 999999999999999999999999999875433333344
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+... ...+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~------~~~~~~ 225 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT---AEMYDNILNKPLRLKPNI------SVSARH 225 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---HHHHHHHHcCCCCCCCCC------CHHHHH
Confidence 45689999999999998999999999999999999999999875332 222233333332222211 124788
Q ss_pred HHhhhcCCCCCCCCCc----cccccCCCCCC
Q 042457 332 IAFACLRSKPKSRPTM----RRSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RPs~----~eil~hp~~~~ 358 (361)
++.+||+.||.+||++ .++++||||+.
T Consensus 226 li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 226 LLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred HHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 9999999999999998 49999999965
No 79
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.2e-45 Score=333.92 Aligned_cols=252 Identities=22% Similarity=0.330 Sum_probs=203.1
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||++... +++.||+|++..... .....+.+..|..++.++ +|+||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999764 678999999976432 223346688899999888 699999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|..++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++...........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 99998887554 589999999999999999999999 999999999999999999999999999875433333334
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccC---Ccc-hhHhhhhcccCCCCCCChhhHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSF---NPK-IMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
...||+.|+|||++.+..++.++||||||+++|||++|+.||...... ... .....+.......+...+ .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~ 228 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLS------V 228 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCC------H
Confidence 456899999999999999999999999999999999999999643321 111 112222222222222111 2
Q ss_pred HHHHHHhhhcCCCCCCCCCc------cccccCCCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPTM------RRSFPNPEINP 358 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~------~eil~hp~~~~ 358 (361)
.+.+++.+||+.||.+||++ .++++||||+.
T Consensus 229 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~ 265 (327)
T cd05617 229 KASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRS 265 (327)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence 37789999999999999985 59999999975
No 80
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.6e-45 Score=327.21 Aligned_cols=263 Identities=22% Similarity=0.279 Sum_probs=202.8
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|++.+.||+|++|.||+|... +++.||+|.+............+.+|+.+++.++|||++++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999764 689999999876543333346678899999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
++ ++|.+++........+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 68888886644434689999999999999999999999 999999999999999999999999999876543332
Q ss_pred Ccccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc---------------
Q 042457 249 NRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR--------------- 312 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--------------- 312 (361)
......++..|+|||.+.+ ..++.++||||||+++|||+||+.||......+............
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 2233456889999998765 457889999999999999999999987543211110000000000
Q ss_pred --CCCCCC---ChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 313 --APSPID---DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 313 --~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.+.... ..........+.+++.+||+.||.+|||++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 000000 00000011246789999999999999999999999998
No 81
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6.4e-45 Score=319.49 Aligned_cols=255 Identities=26% Similarity=0.421 Sum_probs=211.4
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|.+.+.||+|++|.||++... +++.|++|.+............+..|+++++.++|||++++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777889999999999999764 688999999876544444467889999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++.... ...+++..+..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 99999999997642 23689999999999999999999999 999999999999999999999999999887654443
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIIL 328 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (361)
......++..|+|||+..+..++.++|+||||+++|||++|+.||..... ......+.....+.... .....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~ 228 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ---GALILKIIRGVFPPVSQ-----MYSQQ 228 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCCCCCcc-----ccCHH
Confidence 33445688899999999988899999999999999999999999875432 22222233322221111 11224
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
+.+++.+||+.+|++||++.++++|||+
T Consensus 229 ~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 229 LAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 8899999999999999999999999996
No 82
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.5e-46 Score=338.11 Aligned_cols=257 Identities=25% Similarity=0.338 Sum_probs=207.0
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|.+.+.||+|+||.||++... +|+.||+|+++.... .....+.+..|+.+++.++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999654 688999999976433 2233467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++..... .+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 99999999999976532 589999999999999999999999 9999999999999999999999999999876443
Q ss_pred CCC-ccccccccccccccccc------ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC--CCCC
Q 042457 247 SSN-RTVVAGTHGYIAPELAY------TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA--PSPI 317 (361)
Q Consensus 247 ~~~-~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~ 317 (361)
... .....||+.|+|||++. +..++.++||||||+++|||++|+.||..... ......+..... ..+.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---~~~~~~i~~~~~~~~~~~ 232 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS---AKTYNNIMNFQRFLKFPE 232 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH---HHHHHHHHcCCCccCCCC
Confidence 322 23346899999999886 45677899999999999999999999875432 112222222211 1111
Q ss_pred CChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 318 DDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.. .....+.+|+..|++ +|.+|||++++++||||++
T Consensus 233 ~~----~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 233 DP----KVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred CC----CCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence 10 011247788889998 9999999999999999975
No 83
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.7e-45 Score=339.48 Aligned_cols=263 Identities=22% Similarity=0.323 Sum_probs=206.7
Q ss_pred HHHHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCe
Q 042457 84 IIVATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKC 161 (361)
Q Consensus 84 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 161 (361)
+....++|++.+.||+|+||.||+++.. +++.+|+|.+..... .....+.+.+|+.+++.++||||+++++++..++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3445678999999999999999999765 578999999864322 12223567889999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
.++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccce
Confidence 99999999999999998654 478889999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-Cccccccccccccccccccc----ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCC
Q 042457 242 LLHSDSS-NRTVVAGTHGYIAPELAYTM----VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSP 316 (361)
Q Consensus 242 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 316 (361)
....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+........
T Consensus 191 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~---~~~~~~i~~~~~~~~ 267 (370)
T cd05621 191 KMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL---VGTYSKIMDHKNSLN 267 (370)
T ss_pred ecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCcccC
Confidence 7643222 22345699999999998654 378899999999999999999999975432 122233333221111
Q ss_pred CCChhhHHHHHHHHHHHhhhcCCCCCC--CCCccccccCCCCCC
Q 042457 317 IDDQTVIQDIILVSKIAFACLRSKPKS--RPTMRRSFPNPEINP 358 (361)
Q Consensus 317 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~hp~~~~ 358 (361)
.... ......+.+++..|++.++.+ |||+.|+++||||+.
T Consensus 268 ~p~~--~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 268 FPED--VEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred CCCc--ccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence 1110 111124678888999865544 899999999999986
No 84
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.6e-45 Score=341.52 Aligned_cols=256 Identities=24% Similarity=0.333 Sum_probs=203.0
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|.+.+.||+|+||.||++.. .+|+.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4688899999999999999965 4789999999865332 2233567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999987654 588899999999999999999999 9999999999999999999999999998633210
Q ss_pred CC-------------C----------------------------------cccccccccccccccccccccCccchhhhH
Q 042457 247 SS-------------N----------------------------------RTVVAGTHGYIAPELAYTMVVTEKCDVFGF 279 (361)
Q Consensus 247 ~~-------------~----------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~sl 279 (361)
.. . .....||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 00 0 001358999999999998899999999999
Q ss_pred HHHHHHHHhCCCCCCCcccCCcchhHhhhhcc--cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCC---CCccccccCC
Q 042457 280 GVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ--RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSR---PTMRRSFPNP 354 (361)
Q Consensus 280 G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~eil~hp 354 (361)
||++|||++|+.||..... ......+... ....+.... ....+.+++.+|+. +|.+| +|+.|+++||
T Consensus 235 Gvil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p~~~~----~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp 306 (377)
T cd05629 235 GAIMFECLIGWPPFCSENS---HETYRKIINWRETLYFPDDIH----LSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHP 306 (377)
T ss_pred chhhhhhhcCCCCCCCCCH---HHHHHHHHccCCccCCCCCCC----CCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence 9999999999999875432 1112222221 111111100 11247788889997 66665 6999999999
Q ss_pred CCCC
Q 042457 355 EINP 358 (361)
Q Consensus 355 ~~~~ 358 (361)
||+.
T Consensus 307 ~~~~ 310 (377)
T cd05629 307 FFRG 310 (377)
T ss_pred CcCC
Confidence 9974
No 85
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=9.6e-46 Score=342.87 Aligned_cols=256 Identities=20% Similarity=0.286 Sum_probs=202.3
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|++.+.||+|+||.||+++. .+++.||+|.+..... .......+.+|+++++.++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3688999999999999999965 4689999999865332 1223466889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++.... .++...+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 81 DYIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 9999999999997654 578888999999999999999999 9999999999999999999999999997532100
Q ss_pred C-------------------------------------------CCcccccccccccccccccccccCccchhhhHHHHH
Q 042457 247 S-------------------------------------------SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVA 283 (361)
Q Consensus 247 ~-------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l 283 (361)
. .......||+.|+|||++.+..++.++|||||||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 0 001123689999999999999999999999999999
Q ss_pred HHHHhCCCCCCCcccCCcchhHhhhhccc--CCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCC---CccccccCCCCCC
Q 042457 284 LEVLMGRHPGDLLSSFNPKIMLIDLLDQR--APSPIDDQTVIQDIILVSKIAFACLRSKPKSRP---TMRRSFPNPEINP 358 (361)
Q Consensus 284 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~eil~hp~~~~ 358 (361)
|||++|+.||...... .....+.... ...+.... ....+.+++.+|+ .+|.+|+ |+.|+++||||+.
T Consensus 235 yell~G~~Pf~~~~~~---~~~~~i~~~~~~~~~~~~~~----~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 235 YEMLVGQPPFLADTPA---ETQLKVINWETTLHIPSQAK----LSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred eehhhCCCCCCCCCHH---HHHHHHhccCccccCCCCCC----CCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence 9999999999754421 1111222111 11111111 1113566777766 5999999 9999999999985
No 86
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.7e-45 Score=321.76 Aligned_cols=262 Identities=22% Similarity=0.359 Sum_probs=205.3
Q ss_pred HHHHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeE
Q 042457 84 IIVATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 84 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 162 (361)
++.+++++.....||+|+||.||+|... ++..|++|.+....... .+.+.+|+.+++.++|+||+++++++..++..
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRY--VQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHH--HHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 3455666777778999999999999754 67889999887654332 46788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC-CCCeEEeeecCcc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS-KLEAFVADFGVAR 241 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfg~~~ 241 (361)
++++||+++++|.+++.........++..+..++.|++.||+|||+. +++|+||||+||+++. ++.++|+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 99999999999999997643222237888899999999999999999 9999999999999976 6789999999987
Q ss_pred ccCCCCCCcccccccccccccccccccc--cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 242 LLHSDSSNRTVVAGTHGYIAPELAYTMV--VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 242 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
.............++..|+|||++.+.. ++.++||||||+++|+|++|+.||......................+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 236 (268)
T cd06624 158 RLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPES- 236 (268)
T ss_pred ecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcc-
Confidence 6544333333345788999999886543 7889999999999999999999986433211111111111111111111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
....+.+++.+||+.+|.+|||+.|+++||||
T Consensus 237 -----~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 237 -----LSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -----cCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 11247889999999999999999999999997
No 87
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.2e-45 Score=331.65 Aligned_cols=263 Identities=20% Similarity=0.278 Sum_probs=203.0
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|.+.+.||+|+||.||+|... +++.||+|.+....... ....+.+|+.++++++|+||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC-cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 56888999999999999999764 67889999987543322 12457789999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++ +|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 85 YLDK-DLKQYMDDCGN--IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCCC-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 9975 78777765432 478899999999999999999999 99999999999999999999999999987654433
Q ss_pred CCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc---------------
Q 042457 248 SNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ--------------- 311 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--------------- 311 (361)
.......++..|+|||.+.+ ..++.++||||||+++|||+||+.||......+...........
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence 33334457889999998764 46789999999999999999999998754332111111111000
Q ss_pred ---cCCCCCCCh---hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 312 ---RAPSPIDDQ---TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 312 ---~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..+...... ........+.+++.+||+.||.+|||+.|+++||||+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence 000000000 00001124678999999999999999999999999985
No 88
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-45 Score=317.74 Aligned_cols=267 Identities=24% Similarity=0.295 Sum_probs=210.3
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCc-ceeeeEEEeeCC------
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRN-IVKLYGFCLHKK------ 160 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~------ 160 (361)
..|...++||+|+||+||+|+. .+|+.||+|++.....++..-....+|+.+++.++|+| |+++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 4456667799999999999954 47899999999876543222345679999999999999 999999999877
Q ss_pred eEEEEEEeccCCChhhhhccCCcc-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecC
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEA-IQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGV 239 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~ 239 (361)
..++|+||++ .+|..++...... ..++...+..++.|++.||+|||++ +|+||||||.|||++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 7899999995 5999999875522 3466688999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc------
Q 042457 240 ARLLHSDSSNRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR------ 312 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~------ 312 (361)
++...-+....+..++|..|.|||++.+. .|+...||||+||++.||++++.-|...++.+......+.+...
T Consensus 167 Ara~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 167 ARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred HHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence 99776555556666789999999998876 79999999999999999999999887766533222222222211
Q ss_pred ---------CCCCCCC-hhh-HH-H---HHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 313 ---------APSPIDD-QTV-IQ-D---IILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 313 ---------~~~~~~~-~~~-~~-~---~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
...+... ... .. . .....+++.+|++.+|.+|.|++.+++||||++.
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 0000000 000 00 0 0247789999999999999999999999999864
No 89
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-47 Score=311.35 Aligned_cols=260 Identities=23% Similarity=0.350 Sum_probs=214.0
Q ss_pred HhcCCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
.+++|++-+.||+|.|+.|+++ ..++|+.+|+|.+....-.....+++.+|+.+-+.++||||+++...+.+....|+|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 3556777888999999999998 556789899988765544444467888999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC---CCCeEEeeecCccc
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS---KLEAFVADFGVARL 242 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---~~~~kl~Dfg~~~~ 242 (361)
+|+|.|++|..-+-.. .-+++...-..+.||+++|.|+|.+ +|+|||+||+|+++.. .--+||+|||++..
T Consensus 89 Fe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred EecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 9999999997544332 2467788889999999999999999 9999999999999943 34589999999998
Q ss_pred cCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhh
Q 042457 243 LHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTV 322 (361)
Q Consensus 243 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (361)
+. +........||++|||||++...+++..+|||+-|++||-|+.|+.||.+.+. ......+..+....+......
T Consensus 163 l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~---~rlye~I~~g~yd~~~~~w~~ 238 (355)
T KOG0033|consen 163 VN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---HRLYEQIKAGAYDYPSPEWDT 238 (355)
T ss_pred eC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH---HHHHHHHhccccCCCCcccCc
Confidence 86 55555667899999999999999999999999999999999999999876432 334455555544433322111
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 323 IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 323 ~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
. ..+..+|+.+||..||.+|.|+.|.|+|||+++
T Consensus 239 i--s~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 239 V--TPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred C--CHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 1 124788999999999999999999999999976
No 90
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.3e-45 Score=320.04 Aligned_cols=254 Identities=29% Similarity=0.480 Sum_probs=208.8
Q ss_pred hcCCCCcCeeeecCceeEEEEEeCC-CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLPS-GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
.++|+..+.||+|+||.||+|...+ ++.+++|.+..... .+.+.+|+++++.++|+|++++++++......++++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 4678889999999999999998764 78999999865432 478889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++..... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 78 EYCGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred ecCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 99999999999865432 689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
........++..|+|||.+.+..++.++||||||+++|+|++|+.||........ ....... ........ ....
T Consensus 153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~---~~~~~~~-~~~~~~~~--~~~~ 226 (256)
T cd06612 153 MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA---IFMIPNK-PPPTLSDP--EKWS 226 (256)
T ss_pred ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh---hhhhccC-CCCCCCch--hhcC
Confidence 3333344578899999999888899999999999999999999999875433211 1111111 11111111 1112
Q ss_pred HHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
..+.+++.+||+.||++|||+.|+++||||
T Consensus 227 ~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 227 PEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 247889999999999999999999999997
No 91
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-46 Score=309.84 Aligned_cols=259 Identities=25% Similarity=0.366 Sum_probs=214.3
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc------hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeC
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET------ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHK 159 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 159 (361)
-+.|.-.+.||.|..+.|-++.. .+|..+|+|++..... .....+...+|+.+|+++ .||+|+.+.++++.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 34567777899999999988844 4688899998854322 234456778999999998 699999999999999
Q ss_pred CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecC
Q 042457 160 KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGV 239 (361)
Q Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~ 239 (361)
...++|+|.|+.|.|.++|.+.- .+++...++|++|+.+|+.|||.+ +|+||||||+|||+|++.+++|+|||+
T Consensus 96 sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred chhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccce
Confidence 99999999999999999998654 689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccc------cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC
Q 042457 240 ARLLHSDSSNRTVVAGTHGYIAPELAYT------MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA 313 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 313 (361)
++.+.... .....+||++|+|||.+.. ..|+...|+|+.|++||.|+.|.+||....+ -.++..+..+..
T Consensus 170 a~~l~~Ge-kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ---mlMLR~ImeGky 245 (411)
T KOG0599|consen 170 ACQLEPGE-KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ---MLMLRMIMEGKY 245 (411)
T ss_pred eeccCCch-hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH---HHHHHHHHhccc
Confidence 99886543 3445689999999998753 3478899999999999999999999875432 334555666655
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 314 PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
........ +......+||.+||+.||.+|.|++|.|+||||.+
T Consensus 246 qF~speWa--dis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 246 QFRSPEWA--DISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred ccCCcchh--hccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 43332222 22235889999999999999999999999999954
No 92
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=6.9e-45 Score=330.14 Aligned_cols=254 Identities=21% Similarity=0.324 Sum_probs=206.0
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeCCeEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIR-HRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 166 (361)
+|+..+.||+|+||.||++... +|+.||+|++..... .....+.+..|..++..+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4677889999999999999654 688999999875422 1223456778888888885 577888999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999987654 589999999999999999999999 9999999999999999999999999998764433
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
........||..|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~~~i~~~~~~~p~~~~------ 225 (323)
T cd05615 155 GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---DELFQSIMEHNVSYPKSLS------ 225 (323)
T ss_pred CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCCccCC------
Confidence 3333445689999999999988899999999999999999999999875432 2223333333332222211
Q ss_pred HHHHHHHhhhcCCCCCCCCCc-----cccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTM-----RRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~-----~eil~hp~~~~ 358 (361)
..+.+++.+||+.+|.+|++. +++++||||+.
T Consensus 226 ~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 226 KEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred HHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence 247789999999999999985 68999999985
No 93
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.8e-45 Score=323.31 Aligned_cols=257 Identities=26% Similarity=0.422 Sum_probs=203.9
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeC----
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHK---- 159 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~---- 159 (361)
.+++.|++.+.||+|+||.||+|... +++.||+|.+...... ...+..|+.+++++ +|+|++++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc---HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 35677888999999999999999654 6889999998755432 25677899999998 799999999998753
Q ss_pred --CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeee
Q 042457 160 --KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADF 237 (361)
Q Consensus 160 --~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 237 (361)
...+++|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+||
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccC
Confidence 458999999999999999876432 2588999999999999999999999 9999999999999999999999999
Q ss_pred cCccccCCCCCCccccccccccccccccc-----ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc
Q 042457 238 GVARLLHSDSSNRTVVAGTHGYIAPELAY-----TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR 312 (361)
Q Consensus 238 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 312 (361)
|++..............|+..|+|||++. +..++.++||||||+++|||++|+.||........ ........
T Consensus 156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~---~~~~~~~~ 232 (272)
T cd06637 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA---LFLIPRNP 232 (272)
T ss_pred CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH---HHHHhcCC
Confidence 99976644333344456889999999875 34578899999999999999999999865432111 11111111
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 313 APSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
....... .....+.+++.+||+.||.+|||+.++++||||
T Consensus 233 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 233 APRLKSK----KWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCCCCC----CcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 1111000 111247899999999999999999999999998
No 94
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-46 Score=318.70 Aligned_cols=265 Identities=23% Similarity=0.339 Sum_probs=210.0
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee-----CC
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH-----KK 160 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~ 160 (361)
....|...+.||+|+||.|+.+.. .+|+.||||++...-......+...+|+.+|+.++|+||+.+.+.+.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 345566678899999999999954 578999999998655545556788899999999999999999998876 24
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
.+|+|+|+| +.+|...++.+. .++......++.|+++||.|+|+. +++||||||+|++++.+...||+|||+|
T Consensus 100 DvYiV~elM-etDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccce
Confidence 689999999 679999998775 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCC--CCCccccccccccccccccc-ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchh-------------
Q 042457 241 RLLHSD--SSNRTVVAGTHGYIAPELAY-TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIM------------- 304 (361)
Q Consensus 241 ~~~~~~--~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~------------- 304 (361)
+..... ....+..+.|..|.|||++. ...|+.+.||||.||||.||++|++-|.+.+..++-..
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL 252 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence 987643 22345567899999999765 57799999999999999999999999876554321111
Q ss_pred -------HhhhhcccCCCCCCC-hhh-HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 305 -------LIDLLDQRAPSPIDD-QTV-IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 305 -------~~~~~~~~~~~~~~~-~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
....+...+..+... ... ...-....+|+.+||..||.+|+|++|.|+|||+.+
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 111222111111110 000 011124778999999999999999999999999975
No 95
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.2e-44 Score=321.98 Aligned_cols=253 Identities=24% Similarity=0.364 Sum_probs=203.1
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|++.+.||+|+||.||+|.. .+++.||+|.+..... ......+..|++++++++||||+++++++...+..++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 3678889999999999999964 5788999999865432 2234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++++|..+. .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 80 FMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred cCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 99999996542 467888999999999999999999 9999999999999999999999999999765432
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcc----hhHhhhhcccCCCCCCChhhH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPK----IMLIDLLDQRAPSPIDDQTVI 323 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 323 (361)
......++..|+|||.+.+..++.++|+||||+++|+|++|+.||......... .....+.....+......
T Consensus 149 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 224 (279)
T cd06619 149 -IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQ--- 224 (279)
T ss_pred -cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCc---
Confidence 223346889999999999888999999999999999999999998653322111 111111111111110100
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
....+.+++.+||+.||++||+++|+++||||+.
T Consensus 225 -~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~ 258 (279)
T cd06619 225 -FSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQ 258 (279)
T ss_pred -CCHHHHHHHHHHhhCChhhCCCHHHHhcCccccc
Confidence 1124788999999999999999999999999975
No 96
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.3e-46 Score=321.28 Aligned_cols=253 Identities=23% Similarity=0.369 Sum_probs=219.1
Q ss_pred hcCCCCcCeeeecCceeEEEEE-eCCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQ-LPSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
..+|++.+.||+|.||.|-++. ...|+.||||.++.+.. +.+.+-.+.+|+++|+.++||||+.++.+|.+.+.+.+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 4568888899999999999994 46899999999877653 344566788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||..+|.|++|+...+ .+++.+.+.+++||..|+.|+|.+ +++|||||.+|||+|+++++||+|||++..+.
T Consensus 132 MEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~- 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA- 204 (668)
T ss_pred EEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc-
Confidence 99999999999998876 699999999999999999999999 99999999999999999999999999997664
Q ss_pred CCCCcccccccccccccccccccccC-ccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMVVT-EKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
+....+..+|++-|.+||++.+.+|. +..|-||||++||-|+.|..||+..+. +.....+..+....|...+
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh---k~lvrQIs~GaYrEP~~PS---- 277 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH---KRLVRQISRGAYREPETPS---- 277 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH---HHHHHHhhcccccCCCCCc----
Confidence 34455677899999999999998874 789999999999999999999886543 4445555555554443322
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
...-||+|||..||++|-|+.+|..|.|++
T Consensus 278 ---dA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 278 ---DASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred ---hHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 256788899999999999999999999985
No 97
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3e-45 Score=339.05 Aligned_cols=262 Identities=24% Similarity=0.313 Sum_probs=202.9
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC-----eEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK-----CMF 163 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 163 (361)
+|++.+.||+|+||.||++.. .+|+.||+|++..........+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999975 47899999998754333333467889999999999999999999998776 789
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
+|+||+. ++|.+.+.... .+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ---PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 57877776543 589999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCC-Cccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhh--------------
Q 042457 244 HSDSS-NRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLID-------------- 307 (361)
Q Consensus 244 ~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------------- 307 (361)
..... ......++..|+|||.+.+. .++.++|||||||++|||++|+.||......+......+
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 43222 22234578899999988764 478999999999999999999999975443211111100
Q ss_pred ------hhcccCCCCCCCh---hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 308 ------LLDQRAPSPIDDQ---TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 308 ------~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
+.......+.... ........+.+|+.+||+.||++|||+.|+++||||++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 0000000000000 00001234789999999999999999999999999986
No 98
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-44 Score=324.97 Aligned_cols=256 Identities=22% Similarity=0.371 Sum_probs=208.2
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
..+|.+.+.||+|+||.||+|.. .+++.|++|.+....... .+.+..|+.+++.++|+|++++++.+......++||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~--~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch--HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 35788889999999999999965 468899999987654432 366889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++... .+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 97 e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 97 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred cccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 999999999998643 478999999999999999999999 9999999999999999999999999998765443
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
........+++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ..........+. .... ....
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~-~~~~--~~~~ 243 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR---ALYLIATNGTPE-LQNP--EKLS 243 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH---hHHHHhcCCCCC-CCCc--cccC
Confidence 333333468889999999988888999999999999999999999987543211 111111111111 1101 1112
Q ss_pred HHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..+.+++.+||+.||++|||+.++++||||..
T Consensus 244 ~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred HHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 34788999999999999999999999999964
No 99
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-44 Score=324.96 Aligned_cols=256 Identities=23% Similarity=0.359 Sum_probs=209.3
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
..+|.+.+.||+|+||.||++.. .+++.||+|.+....... .+.+..|+.+++.++|+|++++++++...+..++||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccch--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 46788999999999999999975 579999999987654432 366789999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++.+. .+++.++..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 96 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (297)
T ss_pred cccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence 999999999998653 478899999999999999999999 9999999999999999999999999998766444
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
........+++.|+|||.+.+..++.++|+||||+++|++++|+.||......... ........+.... .....
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~---~~~~~~~~~~~~~---~~~~~ 242 (297)
T cd06656 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL---YLIATNGTPELQN---PERLS 242 (297)
T ss_pred ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe---eeeccCCCCCCCC---ccccC
Confidence 33333456888999999998888999999999999999999999998654331111 1111111111111 11112
Q ss_pred HHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..+.+++.+||+.+|++|||+.++++||||+.
T Consensus 243 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (297)
T cd06656 243 AVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL 274 (297)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence 24788999999999999999999999999975
No 100
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=8.3e-45 Score=330.04 Aligned_cols=249 Identities=24% Similarity=0.311 Sum_probs=199.8
Q ss_pred CeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHH-HHhcCCCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEAR-LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||++.. .+|+.+|+|++..... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3599999999999965 4689999999865422 1122344555554 56779999999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|..++.... .+++..+..++.||+.||+|||+. +++||||||+|||++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 99998887554 589999999999999999999999 999999999999999999999999999875433333344
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...||..|+|||++.+..++.++|||||||++|||++|+.||..... ......+........... ...+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~ 225 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV---AEMYDNILHKPLVLRPGA------SLTAWS 225 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH---HHHHHHHHcCCccCCCCC------CHHHHH
Confidence 45689999999999999999999999999999999999999875432 222233333322222111 124778
Q ss_pred HHhhhcCCCCCCCCCcc----ccccCCCCCC
Q 042457 332 IAFACLRSKPKSRPTMR----RSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RPs~~----eil~hp~~~~ 358 (361)
++.+|++.+|.+||++. ++++||||+.
T Consensus 226 ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 226 ILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred HHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 89999999999999885 8999999975
No 101
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.4e-44 Score=322.62 Aligned_cols=259 Identities=23% Similarity=0.273 Sum_probs=205.2
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
.|+..+.||+|+||.||++... +++.||+|.+...... ......+..|+.++++++|+|++++++.+...+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3667788999999999999654 6889999998654322 2223557789999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999998864332 2588999999999999999999999 99999999999999999999999999987653322
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
. .....|+..|+|||++.+..++.++||||||+++|+|++|+.||......................... ....
T Consensus 157 ~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 230 (285)
T cd05630 157 T-IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSE-----KFSP 230 (285)
T ss_pred c-ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCc-----cCCH
Confidence 2 223468999999999998889999999999999999999999997543211111111111111110000 0112
Q ss_pred HHHHHHhhhcCCCCCCCCC-----ccccccCCCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPT-----MRRSFPNPEINP 358 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs-----~~eil~hp~~~~ 358 (361)
.+.+++.+||+.||++||| ++|+++||||++
T Consensus 231 ~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 231 DARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred HHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 4788999999999999999 899999999986
No 102
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.6e-44 Score=321.74 Aligned_cols=255 Identities=24% Similarity=0.369 Sum_probs=204.2
Q ss_pred CCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEec
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
|++.+.||+|+||.||+|... ++..+++|.+..... ...+.+..|+++++.++|+|++++++++...+..++|+||+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH--HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 566788999999999999765 477889998865432 23567889999999999999999999999999999999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 249 (361)
++++|..++..... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.........
T Consensus 85 ~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (282)
T cd06643 85 AGGAVDAVMLELER--PLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR 159 (282)
T ss_pred CCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccccc
Confidence 99999988765322 589999999999999999999999 9999999999999999999999999998765433333
Q ss_pred ccccccccccccccccc-----ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 250 RTVVAGTHGYIAPELAY-----TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
.....++..|+|||++. +..++.++||||||+++|||++|+.||..... ............+.... . ..
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-~--~~ 233 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKSEPPTLAQ-P--SR 233 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH---HHHHHHHhhcCCCCCCC-c--cc
Confidence 33456889999999874 34577899999999999999999999875432 11222222221111111 0 11
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
....+.+++.+||+.||.+|||+.++++||||+.
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 267 (282)
T cd06643 234 WSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTV 267 (282)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCCCEec
Confidence 1235889999999999999999999999999975
No 103
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-44 Score=328.25 Aligned_cols=260 Identities=25% Similarity=0.358 Sum_probs=218.8
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeCC-CCEEEEEEeccCcchH-HHHHHHHHHHHHHhcCC-CCcceeeeEEEeeCCeEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLPS-GKIVALKKLHHSETEL-AFLESFQTEARLLSQIR-HRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 163 (361)
....|.+.+.||+|.||.||++..+. |+.+|+|.+....... ...+.+.+|+.+|+++. ||||+.+.+.+.....++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 45568888999999999999997654 9999999997665422 13467889999999998 999999999999999999
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC----CCeEEeeecC
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK----LEAFVADFGV 239 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~----~~~kl~Dfg~ 239 (361)
+|||++.||.|.+.+... .+++.....++.|++.++.|||+. +++||||||+|+|+... +.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999998766 289999999999999999999999 99999999999999543 4799999999
Q ss_pred ccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 240 ARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
+..... .......+||+.|+|||++....|+..+||||+|+++|.|++|..||....... ....+...........
T Consensus 186 a~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~---~~~~i~~~~~~f~~~~ 261 (382)
T KOG0032|consen 186 AKFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE---IFLAILRGDFDFTSEP 261 (382)
T ss_pred ceEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH---HHHHHHcCCCCCCCCC
Confidence 998766 556677889999999999999999999999999999999999999998765422 2234444444322222
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
... ....+.+++..|+..||.+|+|+.++|+|||++..
T Consensus 262 w~~--is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 262 WDD--ISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred ccc--cCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 111 12358899999999999999999999999999863
No 104
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.7e-46 Score=333.32 Aligned_cols=257 Identities=21% Similarity=0.358 Sum_probs=221.4
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCe-EEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKC-MFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~ 166 (361)
++|...+.+|+|+||.++..+.+ +++.+++|.+..........+...+|+.++++++|||||.+.+.+..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56888899999999999999654 67899999998776555555688899999999999999999999999988 99999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
+||+||++.+.+...+ ...+++.++.+|+.|++.|+.|||++ .|+|||||+.||+++.++.++|+|||+++.+..+
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999998765 34689999999999999999999988 9999999999999999999999999999998877
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC-CCCCCChhhHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA-PSPIDDQTVIQD 325 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 325 (361)
........||+.||+||.+.+.+|..|+|||||||++|||++-+++|...+. ......+..... +.+.. .
T Consensus 160 ~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m---~~Li~ki~~~~~~Plp~~------y 230 (426)
T KOG0589|consen 160 DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM---SELILKINRGLYSPLPSM------Y 230 (426)
T ss_pred hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch---HHHHHHHhhccCCCCCcc------c
Confidence 6667778899999999999999999999999999999999999999876543 333344444432 22222 1
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
...+..++..|++.+|..||++.++|.+|.++.
T Consensus 231 s~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 231 SSELRSLVKSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred cHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence 224888999999999999999999999998764
No 105
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-44 Score=317.56 Aligned_cols=257 Identities=25% Similarity=0.395 Sum_probs=201.4
Q ss_pred HHHHHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhc--CCCCcceeeeEEEeeCC
Q 042457 83 EIIVATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQ--IRHRNIVKLYGFCLHKK 160 (361)
Q Consensus 83 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~ 160 (361)
-.....++..+.+.||+|.||+||+|.| .|+.||||++...+. +.+.+|.++++. ++|+||+.+++.-..++
T Consensus 205 VQRTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE-----~SWfrEtEIYqTvmLRHENILgFIaaD~~~~ 278 (513)
T KOG2052|consen 205 VQRTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDE-----RSWFRETEIYQTVMLRHENILGFIAADNKDN 278 (513)
T ss_pred hHHhhhheeEEEEEecCccccceeeccc-cCCceEEEEecccch-----hhhhhHHHHHHHHHhccchhhhhhhccccCC
Confidence 3344567788999999999999999999 788899999987664 455667777665 59999999998776543
Q ss_pred ----eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcC-----CCCCeEEeCCCCCCeeeCCCCC
Q 042457 161 ----CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYD-----CIPSIVHRDISSNNILLNSKLE 231 (361)
Q Consensus 161 ----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-----~~~~i~H~dlk~~Nill~~~~~ 231 (361)
.+|||++|.++|||+|+|... .++....++++..+|.||+|||.. ..|.|.|||||+.||||..++.
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~ 354 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 354 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence 589999999999999999875 599999999999999999999964 4578999999999999999999
Q ss_pred eEEeeecCccccCCCCC----Ccccccccccccccccccccc------cCccchhhhHHHHHHHHHhC----------CC
Q 042457 232 AFVADFGVARLLHSDSS----NRTVVAGTHGYIAPELAYTMV------VTEKCDVFGFGVVALEVLMG----------RH 291 (361)
Q Consensus 232 ~kl~Dfg~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~tg----------~~ 291 (361)
+.|+|+|+|........ .....+||.+|||||++...- .-..+||||||.++||+... +.
T Consensus 355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~ 434 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQL 434 (513)
T ss_pred EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcC
Confidence 99999999977655432 234457999999999986432 12368999999999999742 36
Q ss_pred CCCCcccCCcch--hHhhhhccc-CCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccc
Q 042457 292 PGDLLSSFNPKI--MLIDLLDQR-APSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRR 349 (361)
Q Consensus 292 p~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 349 (361)
||.+..+.++.. +..-+..++ .|.........+.+..+.++++.||..+|.-|.|+-.
T Consensus 435 Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALr 495 (513)
T KOG2052|consen 435 PYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALR 495 (513)
T ss_pred CcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHH
Confidence 777665555433 222222232 3333334445566777999999999999999998643
No 106
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.3e-44 Score=316.75 Aligned_cols=255 Identities=24% Similarity=0.384 Sum_probs=205.4
Q ss_pred CCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcc----hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSET----ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
+|...+.||+|+||.||+|...+|+.+|+|.+..... .......+.+|++.++.++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4677889999999999999888899999998865432 223346688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
+||+++++|.+++.+.. .+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999997654 578999999999999999999999 999999999999999999999999999876532
Q ss_pred CC------CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 246 DS------SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 246 ~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
.. .......++..|+|||.+.+..++.++||||||+++|+|++|+.||........ ...........+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~ 231 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA---MFYIGAHRGLMPRLP 231 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH---HHHhhhccCCCCCCC
Confidence 11 111234578899999999988899999999999999999999999875432111 111111101111110
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
. .....+.+++.+||+.+|++|||+.|+++||||
T Consensus 232 ~---~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 232 D---SFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred C---CCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0 112247889999999999999999999999997
No 107
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.4e-45 Score=334.51 Aligned_cols=262 Identities=23% Similarity=0.274 Sum_probs=201.7
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC-----
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK----- 160 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 160 (361)
..++|.+.+.||+|+||.||++.. .+|..||+|++............+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999965 46899999999765444444567889999999999999999999987543
Q ss_pred -eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecC
Q 042457 161 -CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGV 239 (361)
Q Consensus 161 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~ 239 (361)
..++||||+++ +|...+.. .+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence 47999999965 56555532 478889999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchh---------------
Q 042457 240 ARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIM--------------- 304 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~--------------- 304 (361)
++...... ......+|..|+|||.+.+..++.++||||||+++|+|++|+.||......+....
T Consensus 170 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (359)
T cd07876 170 ARTACTNF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNR 248 (359)
T ss_pred ccccccCc-cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHH
Confidence 97543322 22334688999999999999999999999999999999999999975432110000
Q ss_pred ----HhhhhcccCCCCCCC--------------hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 305 ----LIDLLDQRAPSPIDD--------------QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 305 ----~~~~~~~~~~~~~~~--------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
...........+... .........+.+|+.+||+.||++|||+.|+++||||+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 000111110000000 000001234789999999999999999999999999974
No 108
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.1e-44 Score=323.26 Aligned_cols=262 Identities=25% Similarity=0.369 Sum_probs=205.8
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|++.+.||+|++|.||+|... +|+.||+|++..........+.+.+|+.+++.++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999775 58999999987554332233567899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++++|..++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 999998888776543 589999999999999999999999 99999999999999999999999999998765443
Q ss_pred CCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc---------------
Q 042457 248 SNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ--------------- 311 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--------------- 311 (361)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+...........
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 155 DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence 33333457788999998765 55788999999999999999999998754432111111110000
Q ss_pred ---cCCCCCCChhh----HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 312 ---RAPSPIDDQTV----IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 312 ---~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
..+.+...... ......+.+++.+||+.||++|||+.|++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 00000000000 0112347899999999999999999999999998
No 109
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.3e-44 Score=316.31 Aligned_cols=255 Identities=22% Similarity=0.346 Sum_probs=206.1
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcch---HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETE---LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 164 (361)
++|.+.+.||+|++|.||++.. .+++.+|+|.+...... ......+.+|+.++++++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5788999999999999999965 46899999998654321 2234578899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
++||+++++|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++....
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999987654 578899999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCCc---ccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChh
Q 042457 245 SDSSNR---TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQT 321 (361)
Q Consensus 245 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (361)
...... ....++..|+|||.+.+..++.++||||||+++|||++|+.||...... .................
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~-- 230 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM---AAIFKIATQPTNPQLPS-- 230 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH---HHHHHHhccCCCCCCCc--
Confidence 322111 2345778999999999888999999999999999999999998654321 11112211111111110
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 322 VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 322 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.....+.+++.+||+.+|.+|||+.|+++||||
T Consensus 231 --~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 231 --HVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred --cCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 111247889999999999999999999999997
No 110
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.8e-44 Score=327.35 Aligned_cols=249 Identities=22% Similarity=0.320 Sum_probs=199.1
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHH-HHhcCCCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEAR-LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||+|+.. +|+.||+|++..... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999764 688999999865432 1122234555554 67889999999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
++|...+.... .++...+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 81 GELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence 99998886543 578889999999999999999999 999999999999999999999999999875433333334
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+.......+.... ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~------~~~~~ 225 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV---SQMYDNILHKPLQLPGGKT------VAACD 225 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH---HHHHHHHhcCCCCCCCCCC------HHHHH
Confidence 45689999999999888899999999999999999999999875431 2223333333332222211 24788
Q ss_pred HHhhhcCCCCCCCCCcc----ccccCCCCCC
Q 042457 332 IAFACLRSKPKSRPTMR----RSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RPs~~----eil~hp~~~~ 358 (361)
++.+||+.||.+||++. ++++||||+.
T Consensus 226 li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 226 LLVGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred HHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 99999999999999865 9999999974
No 111
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.6e-45 Score=346.16 Aligned_cols=262 Identities=24% Similarity=0.267 Sum_probs=211.0
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC---
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK--- 160 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--- 160 (361)
....++|.+.+.||+|+||+||++.. .+|+.||||.+............+.+|+..+..++|+|++++.+.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34457899999999999999999964 57899999998766544444677889999999999999999988775432
Q ss_pred -----eEEEEEEeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEE
Q 042457 161 -----CMFLIYKYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFV 234 (361)
Q Consensus 161 -----~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl 234 (361)
..++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEE
Confidence 3689999999999999986532 223689999999999999999999999 9999999999999999999999
Q ss_pred eeecCccccCCCC--CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc
Q 042457 235 ADFGVARLLHSDS--SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR 312 (361)
Q Consensus 235 ~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 312 (361)
+|||+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ...........
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~---~~~~~~~~~~~ 261 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM---EEVMHKTLAGR 261 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHhcCC
Confidence 9999997654322 122345689999999999999999999999999999999999999875332 22222233222
Q ss_pred CC-CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 313 AP-SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 313 ~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.. .+... ...+.+++.+||+.||.+|||+.++++|||++.
T Consensus 262 ~~~~~~~~------~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 262 YDPLPPSI------SPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred CCCCCCCC------CHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 21 11111 124889999999999999999999999999764
No 112
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.2e-44 Score=314.55 Aligned_cols=255 Identities=24% Similarity=0.384 Sum_probs=207.8
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee-CCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH-KKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e 167 (361)
+|++.+.||+|++|.||++... +++.||+|.+..........+.+..|++++++++|+|++++++.+.. ....+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999654 57889999987654444445678899999999999999999998764 446899999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++++|.+++..... ..+++.++..++.+++.|+++||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~-~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKG-KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 9999999999876432 2589999999999999999999999 99999999999999999999999999998765443
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
.......+++.|+|||.+.+..++.++||||||+++++|++|+.||..... ............+.... ....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~ 228 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM---NSLVYRIIEGKLPPMPK-----DYSP 228 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHhcCCCCCcc-----ccCH
Confidence 334445688899999999988899999999999999999999999864321 22222333332221111 1122
Q ss_pred HHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.+.+++.+||+.||++|||+.++++||||
T Consensus 229 ~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 229 ELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 58899999999999999999999999997
No 113
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.3e-45 Score=336.49 Aligned_cols=256 Identities=22% Similarity=0.344 Sum_probs=203.6
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|+..+.||+|+||.||++... +++.||+|++..... .......+..|+.++..++|+||+++++.+...+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999664 689999999875332 2233567888999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++.+.. .+++..+..++.|++.||.|||+. +++||||||+|||++.++.++|+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999997654 588999999999999999999999 9999999999999999999999999998754221
Q ss_pred CC-----------------------------------CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCC
Q 042457 247 SS-----------------------------------NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRH 291 (361)
Q Consensus 247 ~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~ 291 (361)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 00 0112468999999999999999999999999999999999999
Q ss_pred CCCCcccCCcchhHhhhhccc--CCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCC---ccccccCCCCCC
Q 042457 292 PGDLLSSFNPKIMLIDLLDQR--APSPIDDQTVIQDIILVSKIAFACLRSKPKSRPT---MRRSFPNPEINP 358 (361)
Q Consensus 292 p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil~hp~~~~ 358 (361)
||..... ......+.... ...+..... ...+.+++.+|+. ||.+|++ +.|+++||||+.
T Consensus 235 Pf~~~~~---~~~~~~i~~~~~~~~~p~~~~~----s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~ 298 (360)
T cd05627 235 PFCSETP---QETYRKVMNWKETLVFPPEVPI----SEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEG 298 (360)
T ss_pred CCCCCCH---HHHHHHHHcCCCceecCCCCCC----CHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCC
Confidence 9875432 12222222211 111111111 1136677777764 9999995 789999999986
No 114
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-45 Score=321.91 Aligned_cols=260 Identities=24% Similarity=0.352 Sum_probs=206.5
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcch------------HHHHHHHHHHHHHHhcCCCCcceeee
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETE------------LAFLESFQTEARLLSQIRHRNIVKLY 153 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~------------~~~~~~~~~e~~~l~~l~h~niv~~~ 153 (361)
--++|.+...||+|.||.|-+|+. .+++.||||++...... ..-.+...+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 346799999999999999999954 47899999999654321 11235788999999999999999999
Q ss_pred EEEeeC--CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCC
Q 042457 154 GFCLHK--KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLE 231 (361)
Q Consensus 154 ~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~ 231 (361)
.+..+. +.+|||+|||..|.+...=.... .++..++++++.++..||.|||.+ +|+||||||+|+|++++|+
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d~~---els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPDKP---ELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCCcc---cccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCc
Confidence 998874 57999999999998765432221 289999999999999999999999 9999999999999999999
Q ss_pred eEEeeecCccccCCCC-----CCcccccccccccccccccccc----cCccchhhhHHHHHHHHHhCCCCCCCcccCCcc
Q 042457 232 AFVADFGVARLLHSDS-----SNRTVVAGTHGYIAPELAYTMV----VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPK 302 (361)
Q Consensus 232 ~kl~Dfg~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 302 (361)
+||+|||.+....... .......||+.|+|||...++. .+.+.||||+||+||-|+.|+.||-+... .
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~---~ 325 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE---L 325 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH---H
Confidence 9999999987652221 1123367999999999887632 35689999999999999999999865432 1
Q ss_pred hhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 303 IMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.....+....+..+... +....+.+||+++|.+||+.|.+..+|-.|||..+.
T Consensus 326 ~l~~KIvn~pL~fP~~p----e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 326 ELFDKIVNDPLEFPENP----EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHHHhcCcccCCCcc----cccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 22334444444444332 222358899999999999999999999999998764
No 115
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-44 Score=320.43 Aligned_cols=242 Identities=19% Similarity=0.303 Sum_probs=195.7
Q ss_pred CeeeecCceeEEEEEeCCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEee----CCeEEEEEEec
Q 042457 95 YCIGTGGYGSVYRAQLPSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLH----KKCMFLIYKYM 169 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~ 169 (361)
..||+|++|.||+|.+ +|+.||||++..... .....+.+.+|+.++++++||||++++|++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5699999999999998 789999999976543 22335778899999999999999999999977 34689999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 249 (361)
++|+|.+++.... .+++.....++.+++.||.|||+.. +++||||||+||++++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 105 TRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence 9999999998654 5889999999999999999999742 77899999999999999999999999987654322
Q ss_pred cccccccccccccccccc--cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 250 RTVVAGTHGYIAPELAYT--MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
....++..|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+.......+... ....
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~---~~~~~~i~~~~~~~~~~~----~~~~ 249 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT---KEIYDLIINKNNSLKLPL----DCPL 249 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcCCCCCCCC----cCcH
Confidence 22357889999999876 6789999999999999999999999975432 222222322222211111 1122
Q ss_pred HHHHHHhhhcCCCCCCCCCcccccc
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.+.+++.+||+.||++|||++|+++
T Consensus 250 ~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 250 EIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHHH
Confidence 5889999999999999999999985
No 116
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-44 Score=324.16 Aligned_cols=255 Identities=23% Similarity=0.381 Sum_probs=208.5
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
.+|++.+.||.|++|.||+|.. .+|+.|++|.+....... .+.+.+|+..++.++|+|++++++++...+..++|+|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 96 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK--KELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME 96 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch--HHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence 4688899999999999999964 578999999987544322 3678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++++|..++... .+++.++..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 97 YLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred ecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 99999999988653 489999999999999999999999 99999999999999999999999999987665443
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
.......++..|+|||.+.+..++.++||||||+++|++++|+.||....... ..........+..... .....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~ 243 (296)
T cd06655 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALYLIATNGTPELQNP---EKLSP 243 (296)
T ss_pred ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhcCCcccCCc---ccCCH
Confidence 33334468889999999988889999999999999999999999987544311 1111111111111010 01112
Q ss_pred HHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.+.+++.+||+.||++|||+.++++||||+.
T Consensus 244 ~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 244 IFRDFLNRCLEMDVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence 4778999999999999999999999999975
No 117
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.2e-44 Score=340.78 Aligned_cols=261 Identities=20% Similarity=0.287 Sum_probs=195.5
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC------
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK------ 159 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 159 (361)
..++|.+.+.||+|+||.||+|.. .+++.||||++..... ...+|+.+++.++|+||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ------YKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 456799999999999999999976 4688999998864332 234799999999999999999887532
Q ss_pred --CeEEEEEEeccCCChhhhhccC-CccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC-CeEEe
Q 042457 160 --KCMFLIYKYMRRGSLFCVLRND-DEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL-EAFVA 235 (361)
Q Consensus 160 --~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~-~~kl~ 235 (361)
...++||||+++ +|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 246799999975 666665431 1223689999999999999999999999 999999999999998665 69999
Q ss_pred eecCccccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc--
Q 042457 236 DFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR-- 312 (361)
Q Consensus 236 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-- 312 (361)
|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+............
T Consensus 214 DFGla~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 214 DFGSAKNLLAGQR-SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred ccccchhccCCCC-cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 9999987643322 223467899999998765 468999999999999999999999997544321111111111000
Q ss_pred ------------CCCCCCChhhH------HHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 313 ------------APSPIDDQTVI------QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 313 ------------~~~~~~~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
...+....... .....+.+|+.+||++||.+|||+.|+++||||++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD 356 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence 00000000000 01235789999999999999999999999999964
No 118
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.4e-44 Score=321.28 Aligned_cols=259 Identities=24% Similarity=0.387 Sum_probs=207.4
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
..+.|++.+.||+|+||.||+|... +++.+++|.+..... ...+.+..|+.+++.++|+|++++++.+..++..++|
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCH--HHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 3467889999999999999999765 588999999876543 2357788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+++++|..++.+... .+++..+..++.|++.++.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 88 IEFCPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred EecCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence 999999999888765432 589999999999999999999999 999999999999999999999999999876443
Q ss_pred CCCCccccccccccccccccc-----ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCCh
Q 042457 246 DSSNRTVVAGTHGYIAPELAY-----TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQ 320 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (361)
.........++..|+|||++. ...++.++||||||+++|||++|+.||..... ............+.....
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~- 238 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKSEPPTLSQP- 238 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH---HHHHHHHhcCCCccCCCC-
Confidence 333334456788999999874 34467899999999999999999999865432 111222222211111110
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
......+.+++.+||+.||++||++.++++||||+.
T Consensus 239 --~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 239 --SKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred --cccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 111124788999999999999999999999999974
No 119
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.9e-44 Score=315.76 Aligned_cols=261 Identities=26% Similarity=0.422 Sum_probs=210.4
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|++.+.||.|+||.||+|... ++..+++|++....... ....+.+|+..++.++|+|++++++.+...+..++++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 46888999999999999999754 67899999987554333 45788999999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
++++++|.+++........+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++..+....
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 999999999997654333689999999999999999999999 99999999999999999999999999987765433
Q ss_pred CC----ccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhh
Q 042457 248 SN----RTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTV 322 (361)
Q Consensus 248 ~~----~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (361)
.. .....++..|+|||.+... .++.++|+||||+++|||++|+.||...... ...........+........
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 233 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM---KVLMLTLQNDPPSLETGADY 233 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh---hhHHHHhcCCCCCcCCcccc
Confidence 22 1334578899999988766 7899999999999999999999998754332 11222222221111111100
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 323 IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 323 ~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
......+.+++.+||+.||++|||+.++++||||
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 234 KKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 1112357899999999999999999999999998
No 120
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.5e-44 Score=326.84 Aligned_cols=249 Identities=23% Similarity=0.286 Sum_probs=197.8
Q ss_pred CeeeecCceeEEEEEeC-CCCEEEEEEeccCcch-HHHHHHHHHHH-HHHhcCCCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETE-LAFLESFQTEA-RLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||++... +++.||+|++...... ......+..|. .+++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 35999999999999765 5788999998754321 11123344444 456788999999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
++|.+++.... .+.......++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence 99999987654 577888899999999999999999 999999999999999999999999999875433333344
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+... ...+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~------~~~~~~ 225 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---AEMYDNILNKPLQLKPNI------TNSARH 225 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH---HHHHHHHHhCCcCCCCCC------CHHHHH
Confidence 45689999999999999999999999999999999999999875432 122223332222211111 124788
Q ss_pred HHhhhcCCCCCCCCCcc----ccccCCCCCC
Q 042457 332 IAFACLRSKPKSRPTMR----RSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RPs~~----eil~hp~~~~ 358 (361)
++.+||+.||.+||++. ++++|+||+.
T Consensus 226 li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 226 LLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred HHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence 99999999999999987 7999999964
No 121
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.3e-44 Score=333.92 Aligned_cols=267 Identities=20% Similarity=0.294 Sum_probs=209.1
Q ss_pred HHHHHHHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEee
Q 042457 81 FEEIIVATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLH 158 (361)
Q Consensus 81 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 158 (361)
+.++....++|.+.+.||+|+||.||++... +++.+|+|.+..... .....+.+.+|..+++.++||||+++++.+..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4455666789999999999999999999765 678999999864322 22223567789999999999999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 159 KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
.+..++||||+++|+|.+++... .++...+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCC
Confidence 99999999999999999998654 478888999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCC-Cccccccccccccccccccc----ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC
Q 042457 239 VARLLHSDSS-NRTVVAGTHGYIAPELAYTM----VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA 313 (361)
Q Consensus 239 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 313 (361)
++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ......+.....
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---~~~~~~i~~~~~ 264 (371)
T cd05622 188 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---VGTYSKIMNHKN 264 (371)
T ss_pred ceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCC
Confidence 9987643322 22345689999999998653 378899999999999999999999975432 122233332221
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhcCCCCCC--CCCccccccCCCCCCC
Q 042457 314 PSPIDDQTVIQDIILVSKIAFACLRSKPKS--RPTMRRSFPNPEINPS 359 (361)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~hp~~~~~ 359 (361)
....... ......+.+++.+|+..++.+ ||++.|+++||||++.
T Consensus 265 ~~~~~~~--~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 265 SLTFPDD--NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred cccCCCc--CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 1111110 011224778888999854443 7899999999999763
No 122
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.3e-44 Score=327.51 Aligned_cols=259 Identities=17% Similarity=0.269 Sum_probs=199.2
Q ss_pred CcCeeeec--CceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEec
Q 042457 93 IKYCIGTG--GYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 93 ~~~~lg~G--~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
+.+.||+| +|++||++.. .+|+.||+|++..........+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45679999 6899999965 57899999999766544444567888999999999999999999999999999999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC-
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS- 248 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~- 248 (361)
++|+|.+++..... ..+++..++.++.|++.||+|||+. +++|+||||+|||++.++.++++||+..........
T Consensus 82 ~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 99999999865322 1488999999999999999999999 999999999999999999999999986543321111
Q ss_pred ------Ccccccccccccccccccc--cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCC------
Q 042457 249 ------NRTVVAGTHGYIAPELAYT--MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAP------ 314 (361)
Q Consensus 249 ------~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------ 314 (361)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ .........+
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~ 234 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM---LLEKLNGTVPCLLDTT 234 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH---HHHHhcCCcccccccc
Confidence 0112346678999999875 4588999999999999999999999975332110 0000000000
Q ss_pred -----------------------------CCC-----CChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 315 -----------------------------SPI-----DDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 315 -----------------------------~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.+. ...........+.+++.+||+.||++|||++|+++||||++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 000 00000111235789999999999999999999999999976
No 123
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.6e-44 Score=321.39 Aligned_cols=259 Identities=26% Similarity=0.420 Sum_probs=209.3
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
.++|.+.+.||.|+||.||++... ++..+|+|........ ..+.+..|++++++++|+|++++++.+......++||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEE--ELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHH--HHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 456888999999999999999764 6889999998755332 3467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++..... .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 82 EFCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred eccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 99999999999876432 589999999999999999999999 9999999999999999999999999998765444
Q ss_pred CCCccccccccccccccccc-----ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChh
Q 042457 247 SSNRTVVAGTHGYIAPELAY-----TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQT 321 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (361)
........++..|+|||.+. ...++.++|+||||+++|||++|+.||..... ......+.....+......
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~- 232 (280)
T cd06611 157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP---MRVLLKILKSEPPTLDQPS- 232 (280)
T ss_pred ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH---HHHHHHHhcCCCCCcCCcc-
Confidence 43444456889999999874 34567899999999999999999999875432 1122222222111111100
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 322 VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 322 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.....+.+++.+||+.+|.+|||+.++++||||++.
T Consensus 233 --~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 233 --KWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred --cCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 111247889999999999999999999999999763
No 124
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.1e-44 Score=333.40 Aligned_cols=263 Identities=22% Similarity=0.273 Sum_probs=202.6
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC-----
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK----- 159 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 159 (361)
...++|.+.+.||+|+||.||++.. ..++.||+|++............+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3457899999999999999999965 3688999999976544444456788999999999999999999988654
Q ss_pred -CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 160 -KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 160 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
...++||||+++ +|...+.. .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 357999999965 56666542 478889999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchh--------------
Q 042457 239 VARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIM-------------- 304 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-------------- 304 (361)
+++..... .......+|..|+|||++.+..++.++|||||||++|||++|+.||......+....
T Consensus 165 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 165 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred ccccCCCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99765332 222334689999999999988899999999999999999999999875432110000
Q ss_pred -----HhhhhcccCC--------------CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 305 -----LIDLLDQRAP--------------SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 305 -----~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.......... .+............+.+++.+||+.||++|||+.|+++||||+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~ 316 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV 316 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence 0000000000 00000000011234789999999999999999999999999974
No 125
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.1e-44 Score=342.79 Aligned_cols=255 Identities=20% Similarity=0.229 Sum_probs=206.6
Q ss_pred CCCCcCeeeecCceeEEEEEeC-C-CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-S-GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
.|.+.+.||+|++|.||++... + ++.||+|........ ....+..|+.+++.++||||+++++++...+..++|||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDER--QAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHH--HHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 3888999999999999999543 3 678888876544332 23567789999999999999999999999999999999
Q ss_pred eccCCChhhhhccC-CccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 168 YMRRGSLFCVLRND-DEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 168 ~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
|+++|+|.+++... .....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 99999999888642 2233688999999999999999999999 9999999999999999999999999999876433
Q ss_pred CC--CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCC-CCCCChhhH
Q 042457 247 SS--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAP-SPIDDQTVI 323 (361)
Q Consensus 247 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 323 (361)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... .+...
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~---~~~~~~~~~~~~~~~~~~~---- 295 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ---REIMQQVLYGKYDPFPCPV---- 295 (478)
T ss_pred cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCCCccC----
Confidence 22 12344689999999999998999999999999999999999999864332 2222333322221 11111
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
...+.+++.+||+.||++|||+.+++.|||++.
T Consensus 296 --s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 296 --SSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred --CHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 124788999999999999999999999999853
No 126
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=5.4e-44 Score=317.51 Aligned_cols=252 Identities=24% Similarity=0.279 Sum_probs=198.6
Q ss_pred eeecCceeEEEEEeC-CCCEEEEEEeccCcchH-HHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCCh
Q 042457 97 IGTGGYGSVYRAQLP-SGKIVALKKLHHSETEL-AFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 97 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 174 (361)
||+|+||.||++... +|+.+|+|.+....... .....+..|++++++++||||+++++++......++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999654 68999999986433211 1124456799999999999999999999999999999999999999
Q ss_pred hhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCccccc
Q 042457 175 FCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254 (361)
Q Consensus 175 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 254 (361)
.+++..... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRA 155 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccC
Confidence 988865432 2588999999999999999999999 99999999999999999999999999987654322 223345
Q ss_pred ccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccC-CcchhHhhhhcccCCCCCCChhhHHHHHHHHHHH
Q 042457 255 GTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSF-NPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIA 333 (361)
Q Consensus 255 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 333 (361)
|+..|+|||++.+..++.++||||+||++|||++|+.||...... ................... .....+.+++
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li 230 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQ-----NFTEESKDIC 230 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccc-----cCCHHHHHHH
Confidence 889999999998888999999999999999999999998754321 1111122222222111111 1122478999
Q ss_pred hhhcCCCCCCCCCc----cccccCCCCCC
Q 042457 334 FACLRSKPKSRPTM----RRSFPNPEINP 358 (361)
Q Consensus 334 ~~cl~~dP~~RPs~----~eil~hp~~~~ 358 (361)
.+||+.||++||++ ++++.||||+.
T Consensus 231 ~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 231 RLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred HHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 99999999999999 56779999975
No 127
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.8e-44 Score=314.08 Aligned_cols=255 Identities=22% Similarity=0.338 Sum_probs=208.8
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|++.+.||+|+||.+|++.. .+|+.||+|.+............+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 478889999999999999965 4688999999876543333356788999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++..... ..+++.+++.++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 999999998875432 2478899999999999999999999 999999999999999999999999999976654333
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIIL 328 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (361)
......++..|+|||.+.+..++.++|+||||+++++|++|+.||.... .......+..+..+.... .....
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~ 228 (256)
T cd08218 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN---MKNLVLKIIRGSYPPVSS-----HYSYD 228 (256)
T ss_pred hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC---HHHHHHHHhcCCCCCCcc-----cCCHH
Confidence 3333457889999999988889999999999999999999999986432 222223333333221111 11224
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
+.+++.+||+.+|++||++.++++||||
T Consensus 229 ~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 229 LRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 8899999999999999999999999998
No 128
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.7e-44 Score=333.03 Aligned_cols=262 Identities=22% Similarity=0.268 Sum_probs=202.1
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC------
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK------ 159 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 159 (361)
..++|.+.+.||+|+||.||++.. ..++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 457899999999999999999965 4688999999976544333456788999999999999999999987643
Q ss_pred CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecC
Q 042457 160 KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGV 239 (361)
Q Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~ 239 (361)
...++||||+++ +|.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 357999999965 67666642 478889999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHh-------------
Q 042457 240 ARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLI------------- 306 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~------------- 306 (361)
++...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||......+......
T Consensus 173 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
T cd07875 173 ARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251 (364)
T ss_pred ccccCCCC-cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 97653322 2233468999999999999999999999999999999999999997543211100000
Q ss_pred ------hhhcccCCCC--------------CCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 307 ------DLLDQRAPSP--------------IDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 307 ------~~~~~~~~~~--------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.....+.... ............+.+++.+||+.||.+|||+.|+|+||||+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred hhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 0000000000 000000001234789999999999999999999999999974
No 129
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.4e-44 Score=318.27 Aligned_cols=256 Identities=31% Similarity=0.468 Sum_probs=210.7
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|++.+.||.|++|.||+|... +++.||+|.+..... ......+.+|+.+++.++|+|++++++++..+...++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 36788899999999999999764 688999999876542 2234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||+++......
T Consensus 80 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 80 YCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 99999999998764 589999999999999999999999 99999999999999999999999999998775543
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
.......++..|+|||.+.+..++.++||||||+++|+|+||+.||..... ......+.....+...... ...
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~ 225 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP---MRVLFLIPKNNPPSLEGNK----FSK 225 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch---HHHHHHhhhcCCCCCcccc----cCH
Confidence 334445678899999999988899999999999999999999999865432 1111122222111111110 122
Q ss_pred HHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.+.+++.+||..||++|||++++++||||++.
T Consensus 226 ~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 226 PFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 47889999999999999999999999999763
No 130
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.2e-44 Score=323.85 Aligned_cols=263 Identities=21% Similarity=0.285 Sum_probs=201.7
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|.+.+.||+|+||.||+|... +++.||+|.+........ ...+.+|+.+++.++|+||+++++++...+..++|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA-PCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc-hhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 46888999999999999999664 688999999865433221 2456789999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|++ ++|.+++..... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 85 YLD-KDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred ccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 997 588888765432 578999999999999999999999 99999999999999999999999999997654333
Q ss_pred CCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhh------------cc---
Q 042457 248 SNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLL------------DQ--- 311 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~------------~~--- 311 (361)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||................ ..
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccc
Confidence 33333457889999998765 457889999999999999999999987543211000000000 00
Q ss_pred ---cCCCCCCCh---hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 312 ---RAPSPIDDQ---TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 312 ---~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..+...... ........+.+++.+||+.||.+|||++|+++||||+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 000000000 00001124778999999999999999999999999974
No 131
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.8e-44 Score=322.36 Aligned_cols=261 Identities=26% Similarity=0.334 Sum_probs=195.1
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC---CCCcceeeeEEEeeC-----C
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQI---RHRNIVKLYGFCLHK-----K 160 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~-----~ 160 (361)
+|++.+.||+|+||.||+|... +|+.||+|.+............+..|+.+++.+ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999664 688999999875432221123445666666654 799999999988652 4
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
..++++||+++ +|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcc
Confidence 58999999974 88888865432 2489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc---------
Q 042457 241 RLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ--------- 311 (361)
Q Consensus 241 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--------- 311 (361)
....... ......++..|+|||++.+..++.++||||+||++|||++|+.||......+...........
T Consensus 156 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07863 156 RIYSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 234 (288)
T ss_pred ccccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence 7654322 222345788999999998888999999999999999999999998644321110011110000
Q ss_pred ------cCC-CCCC--ChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 312 ------RAP-SPID--DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 312 ------~~~-~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
... .... ..........+.+++.+||+.||++|||+.|+++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 000 0000 00000112347899999999999999999999999998
No 132
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.1e-44 Score=321.40 Aligned_cols=267 Identities=26% Similarity=0.390 Sum_probs=209.6
Q ss_pred cCHHHHHHHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEE
Q 042457 79 ITFEEIIVATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFC 156 (361)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 156 (361)
++..++..++++|.+.+.||+|+||.||++.. .+++.+|+|.+...... ...+..|+.+++++ +|||++++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV---DEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccH---HHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 44556666788999999999999999999966 46889999998654332 25567889999988 899999999998
Q ss_pred eeC-----CeEEEEEEeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC
Q 042457 157 LHK-----KCMFLIYKYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL 230 (361)
Q Consensus 157 ~~~-----~~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~ 230 (361)
... +..++|+||+++++|.++++... ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 754 35899999999999999886421 223589999999999999999999999 999999999999999999
Q ss_pred CeEEeeecCccccCCCCCCccccccccccccccccccc-----ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhH
Q 042457 231 EAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTM-----VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIML 305 (361)
Q Consensus 231 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 305 (361)
.++|+|||++..............++..|+|||.+... .++.++||||||+++|||++|+.||..... ....
T Consensus 166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~---~~~~ 242 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP---VKTL 242 (291)
T ss_pred CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH---HHHH
Confidence 99999999988665433333344678899999987543 367899999999999999999999865432 1112
Q ss_pred hhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 306 IDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
..+.....+.... . ......+.+++.+||+.+|++|||+.|+++||||+
T Consensus 243 ~~~~~~~~~~~~~-~--~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 243 FKIPRNPPPTLLH-P--EKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHhcCCCCCCCc-c--cccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 2222221111111 1 11123488999999999999999999999999995
No 133
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-44 Score=319.41 Aligned_cols=260 Identities=23% Similarity=0.350 Sum_probs=206.6
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|++.+.||+|+||.||++... +|..||+|.+..... ......+.+|+.++++++|+||+++++.+...+..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD-ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 36788899999999999999775 789999998875432 2234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++++|..++........+++..+..++.+++.||.|||+.. +++|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 9999999998876533336899999999999999999999632 8999999999999999999999999998765322
Q ss_pred CCcccccccccccccccccccc------cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChh
Q 042457 248 SNRTVVAGTHGYIAPELAYTMV------VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQT 321 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (361)
......++..|+|||.+.+.. ++.++|+||||+++|+|++|+.||..............+.....+....
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--- 232 (286)
T cd06622 157 -LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPS--- 232 (286)
T ss_pred -ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCc---
Confidence 222345788999999875543 4789999999999999999999986543221111222222222211111
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 322 VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 322 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.....+.+++.+||+.+|++||+++++++||||..
T Consensus 233 --~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~ 267 (286)
T cd06622 233 --GYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVK 267 (286)
T ss_pred --ccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhh
Confidence 12234788999999999999999999999999965
No 134
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.6e-44 Score=315.19 Aligned_cols=256 Identities=25% Similarity=0.383 Sum_probs=203.9
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
.++|++.+.||+|+||.||+|.. .+++.||+|++....... ...+.+|+.++++++||||+++++++...+..++|+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~--~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDD--FSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccch--HHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 45789999999999999999975 578899999987554322 356788999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 86 EYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 9999999999987543 588999999999999999999999 9999999999999999999999999999866433
Q ss_pred CCCccccccccccccccccc---ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhH
Q 042457 247 SSNRTVVAGTHGYIAPELAY---TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVI 323 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
........++..|+|||.+. ...++.++|+||||+++|||++|+.||......... ..........+.. ....
T Consensus 160 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~-~~~~ 235 (267)
T cd06646 160 IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL---FLMSKSNFQPPKL-KDKT 235 (267)
T ss_pred ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh---eeeecCCCCCCCC-cccc
Confidence 33333446888999999874 345778999999999999999999998643321111 1111111111100 0001
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCccccccCCC
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFPNPE 355 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~ 355 (361)
.....+.+++.+||+.+|++|||++++++|+|
T Consensus 236 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 236 KWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred ccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 11235889999999999999999999999997
No 135
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.3e-44 Score=329.65 Aligned_cols=262 Identities=22% Similarity=0.315 Sum_probs=201.4
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC-----
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK----- 159 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 159 (361)
...++|.+.+.||+|+||.||+|.. .+++.||||.+..........+.+.+|+.+++.++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3457899999999999999999965 4688999999876544333346677899999999999999999987643
Q ss_pred -CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 160 -KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 160 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
...+++++++ +++|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCc
Confidence 3478999988 78898887643 589999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhh--------
Q 042457 239 VARLLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLL-------- 309 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-------- 309 (361)
++...... .....||..|+|||++.+ ..++.++|||||||++|+|++|+.||......+.........
T Consensus 164 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07878 164 LARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVL 240 (343)
T ss_pred cceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99865432 233468899999999876 568899999999999999999999986533211000000000
Q ss_pred ------------cccCCCCCCChh--hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 310 ------------DQRAPSPIDDQT--VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 310 ------------~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
......+..... .......+.+++.+||+.||.+|||+.|+++||||.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 241 KKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred HhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 000000000000 0000123678999999999999999999999999975
No 136
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.9e-44 Score=325.65 Aligned_cols=259 Identities=25% Similarity=0.330 Sum_probs=201.2
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|++.+.||+|+||.||++... +++.||+|++..... .....+.+..|..++..++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888999999999999999764 588999999864322 2223456888999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 99999999999975322 588899999999999999999999 9999999999999999999999999998765433
Q ss_pred CC-Ccccccccccccccccccc-----cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc--CCCCCC
Q 042457 247 SS-NRTVVAGTHGYIAPELAYT-----MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR--APSPID 318 (361)
Q Consensus 247 ~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~ 318 (361)
.. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...... .....+.... ...+..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~---~~~~~i~~~~~~~~~~~~ 232 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV---ETYGKIMNHKEHFQFPPD 232 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH---HHHHHHHcCCCcccCCCc
Confidence 22 2233468999999999863 45788999999999999999999998754321 1112222211 111111
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCC--CCCCCccccccCCCCCC
Q 042457 319 DQTVIQDIILVSKIAFACLRSKP--KSRPTMRRSFPNPEINP 358 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP--~~RPs~~eil~hp~~~~ 358 (361)
... ....+.+++.+|+..++ ..||+++++++||||+.
T Consensus 233 ~~~---~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 233 VTD---VSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred cCC---CCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence 100 11236777778775544 44889999999999975
No 137
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.2e-44 Score=322.53 Aligned_cols=259 Identities=22% Similarity=0.330 Sum_probs=197.1
Q ss_pred hcCCCCcCeeeecCceeEEEEEeCC-----------------CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcce
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLPS-----------------GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIV 150 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 150 (361)
.++|.+.+.||+|+||.||++.+++ +..||+|.+...... .....+.+|+.++.+++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANK-NARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCee
Confidence 4578889999999999999997532 336999998765432 3356789999999999999999
Q ss_pred eeeEEEeeCCeEEEEEEeccCCChhhhhccCC----------------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCe
Q 042457 151 KLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDD----------------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSI 214 (361)
Q Consensus 151 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i 214 (361)
++++++...+..++||||+++|+|.+++.... ....+++..+.+++.|++.||.|||+. ++
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i 159 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF 159 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence 99999999999999999999999999885421 112478889999999999999999999 99
Q ss_pred EEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh--CC
Q 042457 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM--GR 290 (361)
Q Consensus 215 ~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~ 290 (361)
+|+||||+|||++.++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999765432211 122335778999999988889999999999999999987 55
Q ss_pred CCCCCcccCCcchhHhhhhcccC-CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 291 HPGDLLSSFNPKIMLIDLLDQRA-PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 291 ~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.||.................... ....... ......+.+++.+||+.||++|||+.||.+
T Consensus 240 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 240 QPYGELTDEQVIENAGEFFRDQGRQVYLFRP--PPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCcCCHHHHHHHHHHHhhhccccccccCC--CCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 67764432111111111111100 0000000 001124889999999999999999999843
No 138
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.6e-44 Score=310.94 Aligned_cols=260 Identities=23% Similarity=0.295 Sum_probs=219.6
Q ss_pred hcCCCCcCeeeecCceeEEEEEeCC-CCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLPS-GKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
-+.|++.+.||.|.-|+||+++..+ +..+|+|++.+.... .........|.++|+.++||.++.+|+.++.++..|++
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 3457778889999999999998864 589999999766542 33456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
||||+||+|..+.+++... .+++..++.++..++-||+|||.. |||.|||||+||||.++|++-|+||.++.....
T Consensus 156 meyCpGGdL~~LrqkQp~~-~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGK-RFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EecCCCccHHHHHhhCCCC-ccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 9999999999998876544 699999999999999999999999 999999999999999999999999998744311
Q ss_pred ---------------------------------C-C----------------------CCcccccccccccccccccccc
Q 042457 246 ---------------------------------D-S----------------------SNRTVVAGTHGYIAPELAYTMV 269 (361)
Q Consensus 246 ---------------------------------~-~----------------------~~~~~~~gt~~y~aPE~~~~~~ 269 (361)
. . ......+||.+|.|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 0011235899999999999999
Q ss_pred cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCC---
Q 042457 270 VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPT--- 346 (361)
Q Consensus 270 ~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs--- 346 (361)
.+.+.|.|+|||++|||+.|..||.... .+..+.+++.+....+... .....+.+||++.|.+||.+|.-
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~---~~~Tl~NIv~~~l~Fp~~~----~vs~~akDLIr~LLvKdP~kRlg~~r 384 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSN---NKETLRNIVGQPLKFPEEP----EVSSAAKDLIRKLLVKDPSKRLGSKR 384 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCC---chhhHHHHhcCCCcCCCCC----cchhHHHHHHHHHhccChhhhhcccc
Confidence 9999999999999999999999987644 4556777777776655443 22234889999999999999999
Q ss_pred -ccccccCCCCCC
Q 042457 347 -MRRSFPNPEINP 358 (361)
Q Consensus 347 -~~eil~hp~~~~ 358 (361)
+.||-+||||+.
T Consensus 385 GA~eIK~HpFF~g 397 (459)
T KOG0610|consen 385 GAAEIKRHPFFEG 397 (459)
T ss_pred chHHhhcCccccC
Confidence 999999999986
No 139
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.3e-44 Score=343.97 Aligned_cols=264 Identities=19% Similarity=0.280 Sum_probs=196.9
Q ss_pred HHHHHHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC------CCcceeeeE
Q 042457 82 EEIIVATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIR------HRNIVKLYG 154 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~ 154 (361)
+++...+++|++.+.||+|+||.||+|.. .+++.||||+++..... .+.+..|+.+++.++ |.+++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~---~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKY---TRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhh---HHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 34445678899999999999999999965 46788999998653221 234455666666654 456889999
Q ss_pred EEeeC-CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEEeCCCCCCeeeCCCC--
Q 042457 155 FCLHK-KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHY-DCIPSIVHRDISSNNILLNSKL-- 230 (361)
Q Consensus 155 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~i~H~dlk~~Nill~~~~-- 230 (361)
++... ...++|||++ +++|.+++.... .+++..+..++.||+.||.|||+ . +|+||||||+|||++.++
T Consensus 199 ~~~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 199 YFQNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTV 271 (467)
T ss_pred EEEcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcc
Confidence 88765 5789999988 778888886554 58999999999999999999997 5 899999999999998765
Q ss_pred --------------CeEEeeecCccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCc
Q 042457 231 --------------EAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLL 296 (361)
Q Consensus 231 --------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 296 (361)
.+||+|||.+.... .......||..|+|||++.+..++.++|||||||++|||++|+.||+..
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred cccccccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 49999999875432 2233456899999999999999999999999999999999999999754
Q ss_pred ccCCcchhHhhhhccc--------------------CC-CCCCChh------------hHHHHHHHHHHHhhhcCCCCCC
Q 042457 297 SSFNPKIMLIDLLDQR--------------------AP-SPIDDQT------------VIQDIILVSKIAFACLRSKPKS 343 (361)
Q Consensus 297 ~~~~~~~~~~~~~~~~--------------------~~-~~~~~~~------------~~~~~~~l~~li~~cl~~dP~~ 343 (361)
...+............ .. .+..... .......+.+|+.+||+.||.+
T Consensus 349 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 349 DNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred ChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 4311111111110000 00 0000000 0001134779999999999999
Q ss_pred CCCccccccCCCCCC
Q 042457 344 RPTMRRSFPNPEINP 358 (361)
Q Consensus 344 RPs~~eil~hp~~~~ 358 (361)
|||++|+|+||||++
T Consensus 429 R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 429 RLNARQMTTHPYVLK 443 (467)
T ss_pred CCCHHHHhcCccccc
Confidence 999999999999987
No 140
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.1e-43 Score=361.73 Aligned_cols=246 Identities=28% Similarity=0.507 Sum_probs=193.5
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
..+...+.||+|+||.||+|.. .+|..||||++...... ...|++.+++++||||++++|+|.+.+..++|||
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E 763 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE 763 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence 4577888999999999999976 57899999998754332 1245888999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++|+|.++++ .++|.++.+++.|+++||+|||..+.++++||||||+||+++.++..++. ||........
T Consensus 764 y~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~- 835 (968)
T PLN00113 764 YIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD- 835 (968)
T ss_pred CCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-
Confidence 999999999996 38999999999999999999997666699999999999999999888875 6654432211
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhH-----------hhhhcccCCCC
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIML-----------IDLLDQRAPSP 316 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~ 316 (361)
....++..|+|||++.+..++.++|||||||++|||+||+.||+........... ....+.....
T Consensus 836 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 911 (968)
T PLN00113 836 ---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG- 911 (968)
T ss_pred ---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccC-
Confidence 1235788999999999999999999999999999999999998643322111110 0111111111
Q ss_pred CCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 317 IDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
...........+.+++.+||+.||++||||+|+++.
T Consensus 912 -~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 912 -DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred -CCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 111223455568899999999999999999999864
No 141
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.2e-43 Score=320.10 Aligned_cols=258 Identities=25% Similarity=0.340 Sum_probs=204.5
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|++.+.||+|+||.||++... +|..+|+|.+..... ......+.+|++++++++||||+++++++..++..+++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 36888999999999999999654 678899998875433 2334678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++++|.+++.... .+++..+..++.|++.||.|||+.. +++|+||||+||+++.++.++|+|||++.......
T Consensus 80 y~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 80 HMDGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred ccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence 999999999997653 5889999999999999999999732 89999999999999999999999999987553221
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHh---------------------
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLI--------------------- 306 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------------------- 306 (361)
.....++..|+|||.+.+..++.++|+||||+++|+|++|+.||.............
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (308)
T cd06615 155 --ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPD 232 (308)
T ss_pred --cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCC
Confidence 223457889999999888889999999999999999999999986432111000000
Q ss_pred ------------hhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 307 ------------DLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 307 ------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.......+. ... ......+.+++.+||+.||++|||++|+++||||+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 292 (308)
T cd06615 233 SPRPMAIFELLDYIVNEPPPK-LPS---GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292 (308)
T ss_pred ccchhhHHHHHHHHhcCCCcc-CcC---cccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence 000000000 000 001224789999999999999999999999999976
No 142
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.9e-45 Score=334.81 Aligned_cols=258 Identities=23% Similarity=0.383 Sum_probs=205.2
Q ss_pred CCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-C-----CcceeeeEEEeeCCeE
Q 042457 90 DFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIR-H-----RNIVKLYGFCLHKKCM 162 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~~~ 162 (361)
+|.+.+.||+|+||.|.+| ...+++.||||+++.... ...+-..|+.+|..++ | -|+|++++++...++.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~---f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR---FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH---HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 7899999999999999999 456799999999987543 3466778999999986 4 3899999999999999
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC--CCeEEeeecCc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK--LEAFVADFGVA 240 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~--~~~kl~Dfg~~ 240 (361)
|||+|.. ..+|+++++.+... .++...++.++.||+.||.+||+. +|||+||||+||||.+- ..+||+|||.+
T Consensus 264 ciVfELL-~~NLYellK~n~f~-Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 264 CIVFELL-STNLYELLKNNKFR-GLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eeeehhh-hhhHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccc
Confidence 9999998 56999999987655 589999999999999999999999 99999999999999654 46999999999
Q ss_pred cccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhh-------------
Q 042457 241 RLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLID------------- 307 (361)
Q Consensus 241 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~------------- 307 (361)
+.....-. ....+..|.|||++.+.+|+.+.||||||||+.||++|.+.|...+..+.-....+
T Consensus 339 c~~~q~vy---tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 339 CFESQRVY---TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred cccCCcce---eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 86543222 45678899999999999999999999999999999999887765443211000000
Q ss_pred --------------------------------------hhcccCCCCC--CCh-hhHHHHHHHHHHHhhhcCCCCCCCCC
Q 042457 308 --------------------------------------LLDQRAPSPI--DDQ-TVIQDIILVSKIAFACLRSKPKSRPT 346 (361)
Q Consensus 308 --------------------------------------~~~~~~~~~~--~~~-~~~~~~~~l~~li~~cl~~dP~~RPs 346 (361)
..+...+... ... ....+-..+.+++++||..||.+|+|
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t 495 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT 495 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence 0011111000 000 01122345789999999999999999
Q ss_pred ccccccCCCCCC
Q 042457 347 MRRSFPNPEINP 358 (361)
Q Consensus 347 ~~eil~hp~~~~ 358 (361)
+.|.|+||||+.
T Consensus 496 p~qal~Hpfl~~ 507 (586)
T KOG0667|consen 496 PAQALNHPFLTG 507 (586)
T ss_pred HHHHhcCccccc
Confidence 999999999984
No 143
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1e-43 Score=317.08 Aligned_cols=257 Identities=22% Similarity=0.261 Sum_probs=204.3
Q ss_pred CCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 91 FDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
|+..+.||+|+||+||++.. .+++.+|+|.+...... ......+..|+++++.++|+|++++.+.+..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 56678899999999999966 46889999998654322 12234577899999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+|+||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred ccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 999999988865332 2589999999999999999999999 99999999999999999999999999987653322
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhH-hhhhcccCCCCCCChhhHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIML-IDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
......|+..|+|||.+.+..++.++|+||||+++|||++|+.||............ ..........+.. ...
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 230 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAK------FSE 230 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCcc------CCH
Confidence 222346899999999998888999999999999999999999998754321111111 1111111111111 112
Q ss_pred HHHHHHhhhcCCCCCCCCC-----ccccccCCCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPT-----MRRSFPNPEINP 358 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs-----~~eil~hp~~~~ 358 (361)
.+.+|+..||+.||++||| +.++++|+||+.
T Consensus 231 ~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05632 231 EAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRN 266 (285)
T ss_pred HHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhc
Confidence 4788999999999999999 789999999976
No 144
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.1e-44 Score=321.55 Aligned_cols=262 Identities=26% Similarity=0.364 Sum_probs=205.0
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|+++++.++||||+++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999775 58999999987654433334678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++++|..+..... .+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 999999988776543 489999999999999999999999 99999999999999999999999999988765444
Q ss_pred CCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc----------------
Q 042457 248 SNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD---------------- 310 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~---------------- 310 (361)
.......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+..........
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLF 234 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHh
Confidence 33334557889999998765 4577899999999999999999999864332110000000000
Q ss_pred -ccCCCCCCChhh-----HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 311 -QRAPSPIDDQTV-----IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 311 -~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
............ ......+.+++.+||+.+|++|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000000000000 0112358899999999999999999999999998
No 145
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=8.3e-44 Score=317.14 Aligned_cols=264 Identities=25% Similarity=0.409 Sum_probs=208.3
Q ss_pred cCHHHHHHHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEE
Q 042457 79 ITFEEIIVATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFC 156 (361)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 156 (361)
.++.++..+.+.|++.+.||+|+||.||+|.. .+++.+|+|.+...... ...+..|+.+++++ +|+|++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE---EEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHH---HHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 45666667888999999999999999999976 46889999998654322 35677899999988 799999999998
Q ss_pred ee------CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC
Q 042457 157 LH------KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL 230 (361)
Q Consensus 157 ~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~ 230 (361)
.. .+..+++|||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 63 4578999999999999999875432 2478888999999999999999999 999999999999999999
Q ss_pred CeEEeeecCccccCCCCCCccccccccccccccccc-----ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhH
Q 042457 231 EAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY-----TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIML 305 (361)
Q Consensus 231 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 305 (361)
.++|+|||++..............++..|+|||.+. +..++.++|+||||+++|||++|+.||....... ..
T Consensus 159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~---~~ 235 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR---AL 235 (282)
T ss_pred CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh---hh
Confidence 999999999876543333334456888999999875 3457889999999999999999999986543211 11
Q ss_pred hhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 306 IDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
............. ......+.+++.+||+.||.+|||+.|+++||||
T Consensus 236 ~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 236 FLIPRNPPPKLKS----KKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred hhHhhCCCCCCcc----cccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 1111111111110 0112258899999999999999999999999997
No 146
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.3e-44 Score=319.62 Aligned_cols=266 Identities=25% Similarity=0.394 Sum_probs=207.4
Q ss_pred cCHHHHHHHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEE
Q 042457 79 ITFEEIIVATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFC 156 (361)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 156 (361)
+.++.+..+.++|++.+.||+|+||.||++.. .+++.+|+|.+...... ...+..|+.+++.+ +|+|++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~---~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI---DEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccch---HHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 44566677889999999999999999999965 46889999988654332 25577899999998 699999999988
Q ss_pred e-----eCCeEEEEEEeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC
Q 042457 157 L-----HKKCMFLIYKYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL 230 (361)
Q Consensus 157 ~-----~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~ 230 (361)
. .++..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+. +++|+||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 4 3456899999999999998875321 223588899999999999999999999 999999999999999999
Q ss_pred CeEEeeecCccccCCCCCCcccccccccccccccccc-----cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhH
Q 042457 231 EAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-----MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIML 305 (361)
Q Consensus 231 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 305 (361)
.++|+|||++..............|+..|+|||++.. ..++.++||||+|+++|||++|+.||....... ..
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~---~~ 238 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR---AL 238 (286)
T ss_pred CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH---HH
Confidence 9999999998766443333344568899999998753 447889999999999999999999987543211 11
Q ss_pred hhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 306 IDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
........+. ...... ....+.+++.+||+.||++|||+.|+++|+||
T Consensus 239 ~~~~~~~~~~-~~~~~~--~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 239 FKIPRNPPPT-LHQPEL--WSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred hhccccCCCc-ccCCCC--cCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 1111111111 100000 11247889999999999999999999999997
No 147
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.2e-43 Score=313.48 Aligned_cols=253 Identities=26% Similarity=0.440 Sum_probs=204.4
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-------hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-------ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKC 161 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 161 (361)
+|.+...||+|++|.||+|.. .+++.+|+|.+..... .....+.+..|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 366778899999999999965 4688999998865432 12234678899999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
.++++||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||+++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999997654 578899999999999999999999 99999999999999999999999999988
Q ss_pred ccCCCCC------CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCC
Q 042457 242 LLHSDSS------NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPS 315 (361)
Q Consensus 242 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 315 (361)
....... ......++..|+|||.+.+..++.++|+||||+++|+|++|+.||...... ...........+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~ 231 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL---QAIFKIGENASPE 231 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH---HHHHHHhccCCCc
Confidence 7643211 112234788999999998888999999999999999999999998754321 1112222211111
Q ss_pred CCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 316 PIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
... .....+.+++.+||+.||.+||++.|+++||||
T Consensus 232 ~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 232 IPS-----NISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred CCc-----ccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 111 112347889999999999999999999999997
No 148
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.2e-44 Score=333.23 Aligned_cols=259 Identities=21% Similarity=0.262 Sum_probs=202.4
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC---CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP---SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
...+|.+.+.||+|+||.||++... .+..||+|.+.... ...+|+++++.++||||+++++++......+
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 4567999999999999999999653 35789999886532 2457999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
++||++. ++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+|||++.++.++|+|||++...
T Consensus 163 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDRSG---PLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EEehhcC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 9999995 68888884433 689999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc---------
Q 042457 244 HSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR--------- 312 (361)
Q Consensus 244 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--------- 312 (361)
...... .....||..|+|||++.+..++.++|||||||++|||++|+.||...........+..+....
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 433222 223468999999999999999999999999999999999999986543221111111111100
Q ss_pred ----------------CCCCCCChhh---HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 313 ----------------APSPIDDQTV---IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 313 ----------------~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
...+...... ......+.+++.+||..||++|||+.|+|+||||++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 0000000000 0011246789999999999999999999999999864
No 149
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.9e-44 Score=321.59 Aligned_cols=253 Identities=24% Similarity=0.389 Sum_probs=203.5
Q ss_pred CCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEec
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
|.....||+|+||.||++... ++..||||.+..... ...+.+.+|+..++.++|+|++++++.+...+..++||||+
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ--QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH--HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 333456999999999999654 688999999865433 22467889999999999999999999999999999999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 249 (361)
++++|.+++... .+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++.........
T Consensus 102 ~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~ 174 (292)
T cd06658 102 EGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK 174 (292)
T ss_pred CCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc
Confidence 999999988543 488999999999999999999999 9999999999999999999999999998765443333
Q ss_pred cccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHH
Q 042457 250 RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILV 329 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 329 (361)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||....... ....+.. ..+...... ......+
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~---~~~~~~~-~~~~~~~~~--~~~~~~~ 248 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ---AMRRIRD-NLPPRVKDS--HKVSSVL 248 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHh-cCCCccccc--cccCHHH
Confidence 344568899999999988889999999999999999999999987533211 1111111 111111110 0111247
Q ss_pred HHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 330 SKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 330 ~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.+++.+||+.||.+|||++|+++||||+.
T Consensus 249 ~~li~~~l~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 249 RGFLDLMLVREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred HHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence 78999999999999999999999999974
No 150
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.8e-44 Score=330.20 Aligned_cols=260 Identities=24% Similarity=0.366 Sum_probs=202.8
Q ss_pred HHHHHhcCCCCcCeeeecCceeEEEEEe------CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEE
Q 042457 83 EIIVATEDFDIKYCIGTGGYGSVYRAQL------PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGF 155 (361)
Q Consensus 83 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 155 (361)
.+....++|++.+.||+|+||.||+|.. .++..||||+++..... ...+.+.+|+.+++.+ +||||++++++
T Consensus 29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~Ei~il~~l~~HpnIv~l~~~ 107 (375)
T cd05104 29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHINIVNLLGA 107 (375)
T ss_pred ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc-HHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence 3445567899999999999999999963 24568999999754432 2246788999999999 89999999999
Q ss_pred EeeCCeEEEEEEeccCCChhhhhccCCc----------------------------------------------------
Q 042457 156 CLHKKCMFLIYKYMRRGSLFCVLRNDDE---------------------------------------------------- 183 (361)
Q Consensus 156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------- 183 (361)
|...+..++||||+++|+|.++++....
T Consensus 108 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
T cd05104 108 CTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR 187 (375)
T ss_pred eccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence 9999999999999999999998864321
Q ss_pred --------------------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 184 --------------------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 184 --------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
...+++..+..++.||+.||+|||+. +++||||||+|||+++++.+||+|||+++..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 264 (375)
T cd05104 188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI 264 (375)
T ss_pred ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceec
Confidence 12478899999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCCh
Q 042457 244 HSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQ 320 (361)
Q Consensus 244 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (361)
...... .....++..|+|||.+.+..++.++||||||+++|||++ |..||...... ..................
T Consensus 265 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~ 341 (375)
T cd05104 265 RNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD---SKFYKMIKEGYRMLSPEC 341 (375)
T ss_pred cCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch---HHHHHHHHhCccCCCCCC
Confidence 433221 111234567999999999999999999999999999998 88898654321 111222222111111100
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
....+.+++.+||+.||++|||+.|+++.
T Consensus 342 ----~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 342 ----APSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred ----CCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 11248899999999999999999999864
No 151
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.4e-44 Score=327.64 Aligned_cols=258 Identities=21% Similarity=0.280 Sum_probs=196.3
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 164 (361)
....+|.+.+.||+|+||.||+|... +++.||+|..... ....|+.++++++|+||+++++++...+..++
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 44568999999999999999999764 5678999975432 23468999999999999999999999999999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
|+|++. ++|.+++..... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 135 v~e~~~-~~l~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 135 VLPHYS-SDLYTYLTKRSR--PLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EEEccC-CcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 999995 688888765432 589999999999999999999999 99999999999999999999999999987543
Q ss_pred CCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCC-CCCcccCCc------chhHhhhhccc--CCC
Q 042457 245 SDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHP-GDLLSSFNP------KIMLIDLLDQR--APS 315 (361)
Q Consensus 245 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p-~~~~~~~~~------~~~~~~~~~~~--~~~ 315 (361)
.. .......||..|+|||++.+..++.++|||||||++|||+++..| |........ ...+..+.... .+.
T Consensus 209 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 287 (357)
T PHA03209 209 VA-PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE 287 (357)
T ss_pred cC-cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh
Confidence 22 222334589999999999998999999999999999999985544 433211100 00011111100 000
Q ss_pred CCC---Ch--------------------hh---HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 316 PID---DQ--------------------TV---IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 316 ~~~---~~--------------------~~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
... .. .. .........++.+||+.||.+|||+.|+|+||||++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 288 EFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred hcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 000 00 00 001123456899999999999999999999999986
No 152
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=6.3e-44 Score=315.24 Aligned_cols=252 Identities=24% Similarity=0.345 Sum_probs=200.7
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC----CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP----SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 162 (361)
..++|++.+.||+|+||.||+|.+. .+..||+|.++..... ...+.+.+|+..+++++||||+++++++...+..
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD-KQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCH-HHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 3467888999999999999999653 3568999999865433 2346788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.++++|||.+..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 999999999999999876432 589999999999999999999999 999999999999999999999999998765
Q ss_pred cCCCCCC-cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCCh
Q 042457 243 LHSDSSN-RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQ 320 (361)
Q Consensus 243 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (361)
....... .....++..|+|||.+.+..++.++||||||+++||+++ |+.||...... .....+.+... .+...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~---~~~~~~~~~~~-~~~~~- 231 (266)
T cd05064 157 DKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ---DVIKAVEDGFR-LPAPR- 231 (266)
T ss_pred ccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHHHCCCC-CCCCC-
Confidence 4222111 112234578999999999999999999999999999876 99998754331 12222222211 11111
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.....+.+++.+||+.+|++|||+++|++
T Consensus 232 ---~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 232 ---NCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred ---CCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 11224888999999999999999999875
No 153
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.9e-43 Score=312.21 Aligned_cols=256 Identities=23% Similarity=0.363 Sum_probs=201.1
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCc---chHHHHHHHHHHHHHHhcCCCCcceeeeEEEee--CCeE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSE---TELAFLESFQTEARLLSQIRHRNIVKLYGFCLH--KKCM 162 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 162 (361)
.+|...+.||+|+||.||+|.. .++..|++|.+.... ........+.+|+.+++.++|+||+++++++.. ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4688899999999999999965 468899999886432 222335678899999999999999999998875 3568
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++++||+++++|.+++.... .+++...+.++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 89999999999999987654 478899999999999999999999 999999999999999999999999999876
Q ss_pred cCCCC---CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 243 LHSDS---SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 243 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
..... .......++..|+|||.+.+..++.++||||||+++|||++|+.||..... ............ .+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~---~~~~~~~~~~~~-~~~~~ 231 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA---MAAIFKIATQPT-NPQLP 231 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch---HHHHHHHhcCCC-CCCCc
Confidence 53211 112224478899999999888899999999999999999999999875432 111111111111 11110
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
......+..++ +||..+|++|||++|+++||||+.
T Consensus 232 ---~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~~ 266 (266)
T cd06651 232 ---SHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQL 266 (266)
T ss_pred ---hhcCHHHHHHH-HHhcCChhhCcCHHHHhcCccccC
Confidence 11112355666 788899999999999999999973
No 154
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.9e-44 Score=317.19 Aligned_cols=246 Identities=33% Similarity=0.537 Sum_probs=191.7
Q ss_pred CcCeeeecCceeEEEEEeC-----CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 93 IKYCIGTGGYGSVYRAQLP-----SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 93 ~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
+.+.||.|.||.||+|.+. .+..|+||.++..... ...+.+.+|++.+++++||||++++|+|...+..++|+|
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSE-EEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSH-HHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccc-ccceeeeeccccccccccccccccccccccccccccccc
Confidence 4567999999999999875 2568999999664333 236889999999999999999999999998888999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++|+|.++|..... ..+++..+..|+.|++.||+|||+. +++|+||+++||++++++.+||+|||++.......
T Consensus 82 ~~~~g~L~~~L~~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKNK-EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp --TTEBHHHHHHHTCT-TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred cccccccccccccccc-ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999999987621 2589999999999999999999999 99999999999999999999999999998763222
Q ss_pred C--CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCC-CCCChhhH
Q 042457 248 S--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPS-PIDDQTVI 323 (361)
Q Consensus 248 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 323 (361)
. ..........|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+.+..... +...+
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~--- 231 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN---EEIIEKLKQGQRLPIPDNCP--- 231 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH---HHHHHHHHTTEETTSBTTSB---
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccceeccchh---
Confidence 1 1222346778999999998889999999999999999999 7899765432 22233333332221 11111
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
..+.+++..||+.||++|||+.++++
T Consensus 232 ---~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 232 ---KDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp ---HHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ---HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 24788999999999999999999875
No 155
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.5e-44 Score=315.27 Aligned_cols=256 Identities=26% Similarity=0.407 Sum_probs=203.9
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
.++|.+.+.||+|+||.||+|.. .+++.||+|.++...... ...+.+|+.+++.++||||+++++.+...+..++++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGED--FAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhH--HHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 35677788899999999999965 468899999987654322 356788999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++.... .+++.+++.++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 86 EFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred eccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 9999999999987654 589999999999999999999999 9999999999999999999999999998766443
Q ss_pred CCCccccccccccccccccc---ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhH
Q 042457 247 SSNRTVVAGTHGYIAPELAY---TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVI 323 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
........|+..|+|||.+. ...++.++|+||||+++|+|++|+.||....... ............+... ...
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~-~~~ 235 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR---ALFLMTKSNFQPPKLK-DKM 235 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh---hHHhhhccCCCCCccc-ccC
Confidence 33334456899999999874 4557889999999999999999999975433211 1111111111111000 000
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCccccccCCC
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFPNPE 355 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~ 355 (361)
.....+.+++.+||+.+|++|||++++++|||
T Consensus 236 ~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 236 KWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred CCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 11124788999999999999999999999998
No 156
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.1e-43 Score=311.23 Aligned_cols=259 Identities=28% Similarity=0.431 Sum_probs=214.4
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|++.+.||+|++|.||++... +++.|++|++...... .....+..|+..+.+++|+|++++++++...+..++++|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 36888899999999999999775 5899999998776543 335788999999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHY-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
|+++++|.+++.... .+++..++.++.|+++|++|||+ . +++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 80 YMDGGSLADLLKKVG---KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred ecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 999999999997653 68999999999999999999999 8 9999999999999999999999999999876544
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
........++..|+|||.+.+..++.++|+||||+++|+|++|+.||..............+.....+.. ... ...
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~ 229 (264)
T cd06623 154 LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSL-PAE---EFS 229 (264)
T ss_pred CCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCC-Ccc---cCC
Confidence 4443345678899999999888899999999999999999999999876543122222222332222111 111 012
Q ss_pred HHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..+.+++.+||+.+|++|||+.|+++||||+.
T Consensus 230 ~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 230 PEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 35889999999999999999999999999964
No 157
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.1e-43 Score=308.15 Aligned_cols=255 Identities=21% Similarity=0.336 Sum_probs=210.4
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|+..+.||+|+||.||.++. .+++.+++|.+............+.+|+.++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478889999999999999854 4688999999876654444457788999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++.... ...+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999997653 23589999999999999999999999 999999999999999999999999999987654443
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIIL 328 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (361)
......++..|+|||.+.+..++.++||||||+++|||++|..||..... ......+.......... .....
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~ 228 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP---LNLVVKIVQGNYTPVVS-----VYSSE 228 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHcCCCCCCcc-----ccCHH
Confidence 33445688999999999888889999999999999999999999864321 22222333322221111 11224
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
+.+++.+||+.+|.+|||+.++++|||+
T Consensus 229 ~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 229 LISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 7889999999999999999999999996
No 158
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.6e-44 Score=327.52 Aligned_cols=248 Identities=23% Similarity=0.309 Sum_probs=196.0
Q ss_pred eeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcC---CCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 97 IGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQI---RHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 97 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
||+|+||.||+|... +|+.||+|++..... .......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999654 689999999864322 112233455666666655 699999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.++|+|||++...........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 81 GELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred ChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 99998887654 589999999999999999999999 999999999999999999999999999876443333344
Q ss_pred ccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVS 330 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 330 (361)
...||..|+|||.+.+. .++.++|||||||++|||++|+.||..... ......+.......+... ....+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~~~-----~~~~~~ 226 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT---QQMYRNIAFGKVRFPKNV-----LSDEGR 226 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH---HHHHHHHHcCCCCCCCcc-----CCHHHH
Confidence 45689999999988754 478999999999999999999999865332 122222322222222111 112477
Q ss_pred HHHhhhcCCCCCCCC----CccccccCCCCCC
Q 042457 331 KIAFACLRSKPKSRP----TMRRSFPNPEINP 358 (361)
Q Consensus 331 ~li~~cl~~dP~~RP----s~~eil~hp~~~~ 358 (361)
+++.+||+.||.+|| ++.++++||||+.
T Consensus 227 ~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 227 QFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred HHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 899999999999998 7899999999975
No 159
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2e-43 Score=315.95 Aligned_cols=253 Identities=26% Similarity=0.364 Sum_probs=210.5
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|.+.+.||+|+||.||++... +++.+|+|.+..... .....+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999764 689999999865432 2233567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 9999999999997654 689999999999999999999999 9999999999999999999999999998776443
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
.....+++.|+|||.+.+...+.++||||||+++|+|++|+.||..... ......+.......+... .
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~------~ 222 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP---IQIYEKILEGKVRFPSFF------S 222 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCccCCccC------C
Confidence 2234578899999999888889999999999999999999999865431 222233333333322221 1
Q ss_pred HHHHHHHhhhcCCCCCCCC-----CccccccCCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRP-----TMRRSFPNPEINPS 359 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RP-----s~~eil~hp~~~~~ 359 (361)
..+.+++.+||+.||.+|| +++|+++||||+..
T Consensus 223 ~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 223 PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred HHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 2478899999999999999 99999999999763
No 160
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.1e-43 Score=318.89 Aligned_cols=265 Identities=26% Similarity=0.327 Sum_probs=206.2
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcch---HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETE---LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
+|.+.+.||+|++|.||+|... +|+.||+|.+...... ......+..|+++++.++|+||+++++++...+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999764 6899999999765433 22335677899999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+ +++|.+++.... ..+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 999999997654 2589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc-------------
Q 042457 246 DSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ------------- 311 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~------------- 311 (361)
.........++..|+|||.+.+ ..++.++||||||+++|||++|..||......+...........
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 4333333456788999998754 45788999999999999999998887644331110000000000
Q ss_pred -----cCCCCCC-ChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCCC
Q 042457 312 -----RAPSPID-DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPSL 360 (361)
Q Consensus 312 -----~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~~ 360 (361)
....... ..........+.+++.+||+.||++|||++|+++||||++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence 0000000 000011124578999999999999999999999999998753
No 161
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8.1e-44 Score=317.49 Aligned_cols=262 Identities=22% Similarity=0.296 Sum_probs=201.8
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|+..+.||.|++|.||+|... +|+.||||.+............+..|++++++++||||+++++++...+..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999664 689999999876544333346788999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+. ++|.+++..... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 95 688888865432 2589999999999999999999999 999999999999999999999999999876544333
Q ss_pred Ccccccccccccccccccccc-cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC--------------
Q 042457 249 NRTVVAGTHGYIAPELAYTMV-VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA-------------- 313 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------------- 313 (361)
......++..|+|||.+.+.. ++.++||||||+++|||+||+.||......+......+......
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYK 235 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHH
Confidence 333344678899999876644 58899999999999999999999864332111100000000000
Q ss_pred -CCCCCChhhH-----HHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 314 -PSPIDDQTVI-----QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 314 -~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
..+....... .....+.+++.+||+.||.+|||++++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 236 PSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred hhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 0000000000 011246789999999999999999999999998
No 162
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.5e-43 Score=309.51 Aligned_cols=257 Identities=29% Similarity=0.452 Sum_probs=209.0
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
.++|++.+.||.|+||.||+|... +++.+++|.+...... ..+.+..|+.++++++||||+++++++...+..+++|
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 467888999999999999999764 5788999998765443 3577889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++..... .++...+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 80 EYCGGGSLQDIYQVTRG--PLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred eCCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 99999999999876522 588999999999999999999999 9999999999999999999999999998766543
Q ss_pred CCCccccccccccccccccccc---ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTM---VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVI 323 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
........++..|+|||.+.+. .++.++|+||||+++|||++|+.||...... .............+. .....
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~---~~~~~~~~~~~~~~~-~~~~~ 230 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM---RALFLISKSNFPPPK-LKDKE 230 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhccCCCcc-ccchh
Confidence 3333345678899999998776 7889999999999999999999998754321 111111112111111 11112
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCccccccCCC
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFPNPE 355 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~ 355 (361)
.....+.+++.+||+.+|.+|||+.+++.|+|
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 231 KWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred hhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 22345889999999999999999999999998
No 163
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.2e-43 Score=319.76 Aligned_cols=255 Identities=23% Similarity=0.325 Sum_probs=189.2
Q ss_pred cCeeeecCceeEEEEEeC---CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee--CCeEEEEEEe
Q 042457 94 KYCIGTGGYGSVYRAQLP---SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH--KKCMFLIYKY 168 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~ 168 (361)
..+||+|+||.||+|... +++.||+|.+...... ..+.+|+.++++++||||+++++++.. ....++++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 357999999999999754 4678999998754432 446789999999999999999998864 4568999999
Q ss_pred ccCCChhhhhccCC------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeee----CCCCCeEEeeec
Q 042457 169 MRRGSLFCVLRNDD------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILL----NSKLEAFVADFG 238 (361)
Q Consensus 169 ~~~g~L~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill----~~~~~~kl~Dfg 238 (361)
+. ++|.+++.... ....+++..+..++.|++.||.|||+. +++||||||+|||+ +.++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 82 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred cC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 85 47877765321 123588999999999999999999999 99999999999999 456789999999
Q ss_pred CccccCCCCC---Ccccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCc------chhHhhh
Q 042457 239 VARLLHSDSS---NRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNP------KIMLIDL 308 (361)
Q Consensus 239 ~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~------~~~~~~~ 308 (361)
+++....... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ......+
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 237 (317)
T cd07868 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 237 (317)
T ss_pred ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHH
Confidence 9987643322 2233568999999998876 4588999999999999999999999864322100 0000011
Q ss_pred hcccC-------------CC--------------CCCChhhH-----HHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 309 LDQRA-------------PS--------------PIDDQTVI-----QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 309 ~~~~~-------------~~--------------~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
..... +. ........ .....+.+|+.+||+.||.+|||++|+++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 238 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00000 00 00000000 001236789999999999999999999999998
No 164
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6e-44 Score=318.32 Aligned_cols=259 Identities=22% Similarity=0.306 Sum_probs=199.7
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|++.+.||+|+||.||+|... +|+.||+|.+............+.+|+.+++.++|+|++++++++.+.+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778889999999999999764 689999999876543333345677899999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
++ ++|.+++..... .+++..++.++.||++||.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 81 CD-QDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred CC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 97 478777764332 589999999999999999999999 999999999999999999999999999976544333
Q ss_pred Cccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhh------------------
Q 042457 249 NRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLL------------------ 309 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~------------------ 309 (361)
......++..|+|||.+.+. .++.++||||||+++|||+||..|+...... ......+.
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV--DDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH--HHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 33334578899999987664 4688999999999999999999885432211 11111000
Q ss_pred cccCCCCCCChhh-----HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 310 DQRAPSPIDDQTV-----IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 310 ~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
............. ......+.+++.+||+.||.+|||++|+++||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 0000000000000 0112347889999999999999999999999998
No 165
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3.1e-43 Score=310.06 Aligned_cols=256 Identities=23% Similarity=0.382 Sum_probs=208.0
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee--CCeEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH--KKCMFLIY 166 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 166 (361)
+|++.+.||.|+||.||++.. .+|+.+|+|.+..........+.+..|+.+++.++|+|++++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477889999999999999965 468899999987655545556778899999999999999999998764 45689999
Q ss_pred EeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHH-----cCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 167 KYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLH-----YDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh-----~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
||+++++|.+++.... ....+++..++.++.|++.||.||| +. +++|+||+|+||++++++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 9999999999986532 2336899999999999999999999 66 9999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCCh
Q 042457 241 RLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQ 320 (361)
Q Consensus 241 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (361)
..............++..|+|||.+.+..++.++|+||||+++|+|++|+.||..... ......+.....+ ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~-~~~-- 231 (265)
T cd08217 158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ---LQLASKIKEGKFR-RIP-- 231 (265)
T ss_pred ccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH---HHHHHHHhcCCCC-CCc--
Confidence 8775544323445688999999999888899999999999999999999999875431 1222222222211 111
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
......+.+++.+|++.+|++|||+++|++|||+
T Consensus 232 --~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 232 --YRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred --cccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 1112358899999999999999999999999996
No 166
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=7.5e-44 Score=314.39 Aligned_cols=259 Identities=25% Similarity=0.363 Sum_probs=209.4
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|+..+.||+|++|.||++... +++.+++|.+...... ...+.+.+|++.+++++||||+++++.+...+..++++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 35777888999999999999775 6889999998765443 335678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHY-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
|+++++|.+++.... ..++...+..++.|++.|++|||+ . +++|+||+|+||++++++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 80 YMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred ecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 999999999997653 268899999999999999999999 7 9999999999999999999999999998765332
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCC--cchhHhhhhcccCCCCCCChhhHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFN--PKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
... ...++..|+|||.+.+..++.++||||||+++|+|++|+.||....... .............+..... .
T Consensus 155 ~~~--~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 228 (265)
T cd06605 155 LAK--TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSG----K 228 (265)
T ss_pred Hhh--cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChh----h
Confidence 211 1557889999999988899999999999999999999999986543211 1111222222221111110 0
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
....+.+++.+||..||++|||+.|++.||||++.
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 229 FSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred cCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 22247899999999999999999999999999863
No 167
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.1e-43 Score=328.15 Aligned_cols=260 Identities=25% Similarity=0.398 Sum_probs=203.2
Q ss_pred HHHHHHhcCCCCcCeeeecCceeEEEEEe------CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeE
Q 042457 82 EEIIVATEDFDIKYCIGTGGYGSVYRAQL------PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYG 154 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~ 154 (361)
+.+....++|++.+.||+|+||.||+|.. .++..||+|.+....... ..+.+.+|+.+++.+ +|+||+++++
T Consensus 31 ~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~il~~l~~h~nIv~~~~ 109 (374)
T cd05106 31 EKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTD-EREALMSELKILSHLGQHKNIVNLLG 109 (374)
T ss_pred ccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHH-HHHHHHHHHHHHHhhccCCceeeEee
Confidence 34456677899999999999999999863 234579999997654332 346788999999999 8999999999
Q ss_pred EEeeCCeEEEEEEeccCCChhhhhccCC----------------------------------------------------
Q 042457 155 FCLHKKCMFLIYKYMRRGSLFCVLRNDD---------------------------------------------------- 182 (361)
Q Consensus 155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------- 182 (361)
+|...+..++||||+++|+|.++++...
T Consensus 110 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (374)
T cd05106 110 ACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189 (374)
T ss_pred EecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence 9999999999999999999999885421
Q ss_pred ---------------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 183 ---------------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 183 ---------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
....+++..+++++.|++.||.|||+. +++||||||+|||+++++.+||+|||+++......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~ 266 (374)
T cd05106 190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS 266 (374)
T ss_pred cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCc
Confidence 012478899999999999999999999 99999999999999999999999999997654332
Q ss_pred CC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 248 SN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 248 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
.. .....++..|+|||++.+..++.++||||||+++|||++ |+.||...... ..................
T Consensus 267 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~---- 339 (374)
T cd05106 267 NYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN---SKFYKMVKRGYQMSRPDF---- 339 (374)
T ss_pred ceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc---HHHHHHHHcccCccCCCC----
Confidence 11 112234567999999988899999999999999999997 99998754321 111222222111111111
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
....+.+++.+||+.||.+|||+.++++
T Consensus 340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 340 APPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0124889999999999999999999875
No 168
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=5.3e-43 Score=308.70 Aligned_cols=255 Identities=27% Similarity=0.443 Sum_probs=207.7
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|...+.||+|+||.||+|... +++.|++|.++.........+.+..|+.+++.++|+||+++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999754 688999999987765545568899999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++.... .+++..+..++.+++.||.|||+. +++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 99999999997653 478899999999999999999999 999999999999999999999999999887644332
Q ss_pred Ccc----cccccccccccccccccc---cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC-CCCCCCh
Q 042457 249 NRT----VVAGTHGYIAPELAYTMV---VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA-PSPIDDQ 320 (361)
Q Consensus 249 ~~~----~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 320 (361)
... ...++..|+|||++.+.. ++.++||||||+++||+++|+.||..... .......+..... ..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~-- 230 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN--EFQIMFHVGAGHKPPIPDS-- 230 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc--hHHHHHHHhcCCCCCCCcc--
Confidence 211 245788999999988766 88999999999999999999999875432 1111111111111 11111
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
......+.+++.+||+.+|++|||+.+++.|||+
T Consensus 231 --~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 231 --LQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred --cccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 1112247789999999999999999999999997
No 169
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.3e-44 Score=318.89 Aligned_cols=253 Identities=29% Similarity=0.453 Sum_probs=205.4
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
.|+..+.||+|+||.||+|... ++..||+|.+....... ..+.+..|+.++++++|+||+++++++...+..++|+||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAED-EIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchH-HHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 3556677999999999999654 57889999987544332 346788999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++... .+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 84 ~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 84 LGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred cCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 9999999988643 588999999999999999999999 999999999999999999999999999976654333
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIIL 328 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (361)
......++..|+|||.+.+..++.++||||||+++|||++|+.|+....... ....+.....+. .. ......
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~-~~----~~~~~~ 228 (277)
T cd06642 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR---VLFLIPKNSPPT-LE----GQYSKP 228 (277)
T ss_pred hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh---HHhhhhcCCCCC-CC----cccCHH
Confidence 3333457889999999988889999999999999999999999986433211 111111111111 11 111234
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
+.+++.+||+.+|++|||+.++++||||+.
T Consensus 229 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 229 FKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 789999999999999999999999999864
No 170
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.3e-43 Score=311.37 Aligned_cols=247 Identities=24% Similarity=0.434 Sum_probs=201.2
Q ss_pred cCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
++|++.+.||+|+||.||++.+.++..+|+|.+...... .+.+..|+.++++++||||+++++++...+..+++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 458888999999999999999988889999998754433 25688999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++|+|.+++..... .+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.++.......
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 81 MENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred CCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 999999999875432 588999999999999999999999 999999999999999999999999999876533222
Q ss_pred C-cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccC-CCCCCChhhHHH
Q 042457 249 N-RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRA-PSPIDDQTVIQD 325 (361)
Q Consensus 249 ~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 325 (361)
. .....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+..... ..+...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~---~~~~~~i~~~~~~~~~~~~------ 226 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN---YEVVEMISRGFRLYRPKLA------ 226 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHCCCCCCCCCCC------
Confidence 1 122234568999999988889999999999999999999 8999865432 112222222221 111111
Q ss_pred HHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
...+.+++.+||+.+|.+|||+.++++
T Consensus 227 ~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 227 SMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 124889999999999999999999975
No 171
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7e-44 Score=334.79 Aligned_cols=257 Identities=22% Similarity=0.283 Sum_probs=198.0
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
.+|.+.+.||+|+||.||++... .++.||||.... ..+.+|++++++++|+||+++++++...+..++|||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 36888999999999999999765 478899996432 335689999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
++. ++|.+++..... .+++.+++.++.|++.||.|||+. +|+||||||+|||++.++.++|+|||+++......
T Consensus 241 ~~~-~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 241 KYR-SDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred ccC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 994 688888765432 589999999999999999999999 99999999999999999999999999997654322
Q ss_pred C--CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccC----CcchhHhhhhccc------CCC
Q 042457 248 S--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSF----NPKIMLIDLLDQR------APS 315 (361)
Q Consensus 248 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~----~~~~~~~~~~~~~------~~~ 315 (361)
. ......||..|+|||++.+..++.++|||||||++|||++|..|+-..... .....+.+++... .+.
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 2 122346899999999999999999999999999999999987654221110 0001111111110 000
Q ss_pred -------------------CCCChhhH----HHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 316 -------------------PIDDQTVI----QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 316 -------------------~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
+......+ .....+.+|+.+||+.||.+|||+.|+|+||||+..
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~~ 461 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQSK 461 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCCC
Confidence 00000000 111247789999999999999999999999999863
No 172
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.7e-43 Score=314.35 Aligned_cols=255 Identities=28% Similarity=0.445 Sum_probs=208.8
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
..|+..+.||+|+||.||+|... ++..||+|.+...... .....+..|+.++++++|+||+++++++...+..++|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 45777888999999999999764 5889999998754432 234778899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++++|.+++... .+++.+...++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 83 YLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred cCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 99999999998753 478899999999999999999999 99999999999999999999999999997765433
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
.......++..|+|||.+.+..++.++|+||||+++|||++|+.||....... ..........+ .. ......
T Consensus 156 ~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~-~~----~~~~~~ 227 (277)
T cd06640 156 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR---VLFLIPKNNPP-TL----TGEFSK 227 (277)
T ss_pred cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh---HhhhhhcCCCC-CC----chhhhH
Confidence 33334457889999999988889999999999999999999999987543211 11111111111 11 112234
Q ss_pred HHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.+.+++.+||+.+|++|||+.++++||||.+.
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 228 PFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 58899999999999999999999999999764
No 173
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.1e-43 Score=318.63 Aligned_cols=259 Identities=23% Similarity=0.312 Sum_probs=210.9
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|++.+.||+|++|.||++... +++.+|+|.+...... ....+.+..|+++++.++|+||+++++.+......+++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999765 4899999999765433 234567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+.+++|.+++.... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987542 23689999999999999999999999 9999999999999999999999999998654321
Q ss_pred CC-----------------------------CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcc
Q 042457 247 SS-----------------------------NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLS 297 (361)
Q Consensus 247 ~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 297 (361)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11 0112357888999999998889999999999999999999999986443
Q ss_pred cCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCC----ccccccCCCCCC
Q 042457 298 SFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPT----MRRSFPNPEINP 358 (361)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~hp~~~~ 358 (361)
. ......+.......+.... ....+.+++.+||+.||++||| ++|+++||||++
T Consensus 237 ~---~~~~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~ 294 (316)
T cd05574 237 R---DETFSNILKKEVTFPGSPP----VSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG 294 (316)
T ss_pred h---HHHHHHHhcCCccCCCccc----cCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence 2 2223333333332222211 2235889999999999999999 999999999976
No 174
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-43 Score=316.30 Aligned_cols=260 Identities=25% Similarity=0.359 Sum_probs=207.7
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
.++|++.+.||+|+||+||++... +|+.||+|.+..... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK-SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc-chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 356778889999999999999654 688999998865433 233577889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++.... .+++..+..++.+++.||.|||+.. +++|+||+|+||++++++.++|+|||++......
T Consensus 83 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 83 EFMDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred ecCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999999999887644 5899999999999999999999732 8999999999999999999999999998654322
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCC----cc----hhHhhhhcccCCCCCC
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFN----PK----IMLIDLLDQRAPSPID 318 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----~~----~~~~~~~~~~~~~~~~ 318 (361)
. .....++..|+|||++.+..++.++|+||||+++|++++|+.||....... .. ...........+....
T Consensus 158 ~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd06620 158 I--ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPS 235 (284)
T ss_pred c--cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCc
Confidence 1 223468899999999888889999999999999999999999997544310 00 0111122111111111
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
......+.+++.+||+.||++|||+.|+++||||.+.
T Consensus 236 ----~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 236 ----SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred ----hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 1122358899999999999999999999999999653
No 175
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.5e-43 Score=322.76 Aligned_cols=259 Identities=24% Similarity=0.319 Sum_probs=201.9
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|.+.+.||+|+||.||++... +++.+|+|.+..... .......+..|..++..++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999765 477899999864322 2222355788999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++..... .+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 99999999999976432 588999999999999999999999 9999999999999999999999999998765333
Q ss_pred CC-Cccccccccccccccccc-----ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC--CCCCC
Q 042457 247 SS-NRTVVAGTHGYIAPELAY-----TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA--PSPID 318 (361)
Q Consensus 247 ~~-~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 318 (361)
.. ......||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+..... ..+..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~---~~~~~~i~~~~~~~~~p~~ 232 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL---VETYGKIMNHKERFQFPAQ 232 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH---HHHHHHHhCCCccccCCCc
Confidence 22 223346899999999876 34578899999999999999999999875432 112222222211 11111
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCC--CCCccccccCCCCCC
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKS--RPTMRRSFPNPEINP 358 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~hp~~~~ 358 (361)
.. .....+.+++.+|+..++.+ |+++.|+++||||+.
T Consensus 233 ~~---~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 233 VT---DVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred cc---cCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 10 11124677888888654444 789999999999975
No 176
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.8e-43 Score=316.69 Aligned_cols=256 Identities=23% Similarity=0.371 Sum_probs=208.1
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
..+|.+.+.||+|+||.||++.. .+++.|++|.+....... .+.+..|+.+++.++|||++++++++...+..++|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPK--KELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchH--HHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 36788899999999999999964 468899999986543332 367889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++.+. .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 96 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred ecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 999999999998754 478899999999999999999999 9999999999999999999999999998765444
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
........++..|+|||.+.+..++.++|+||||+++|++++|+.||......... ........+.. .. .....
T Consensus 169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~---~~~~~~~~~~~-~~--~~~~~ 242 (293)
T cd06647 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL---YLIATNGTPEL-QN--PEKLS 242 (293)
T ss_pred ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe---eehhcCCCCCC-CC--ccccC
Confidence 33334446888999999998888899999999999999999999999754332111 11111111110 00 11112
Q ss_pred HHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..+.+++.+||+.+|++||++.+++.||||+.
T Consensus 243 ~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~ 274 (293)
T cd06647 243 AIFRDFLNRCLEMDVEKRGSAKELLQHPFLKI 274 (293)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence 24788999999999999999999999999975
No 177
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.9e-43 Score=309.72 Aligned_cols=258 Identities=24% Similarity=0.429 Sum_probs=206.4
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc----hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET----ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 164 (361)
+|+..+.||+|++|.||++.. .+++.||+|.+..... .....+.+..|+..+++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477788999999999999964 5789999999865432 12235788999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC-CeEEeeecCcccc
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL-EAFVADFGVARLL 243 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfg~~~~~ 243 (361)
|+||+++++|.+++.+.. .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999997644 588999999999999999999999 999999999999998776 5999999998766
Q ss_pred CCCCCC----cccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 244 HSDSSN----RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 244 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
...... .....++..|+|||.+.+..++.++|+||+|+++|+|++|..||.........................
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 233 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIP- 233 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCc-
Confidence 443211 122457889999999988889999999999999999999999986443322222222221111111111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
......+.+++.+||+.+|++|||+.++++||||+
T Consensus 234 ---~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 234 ---EHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ---hhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 11123478899999999999999999999999995
No 178
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-45 Score=313.49 Aligned_cols=258 Identities=24% Similarity=0.348 Sum_probs=199.3
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC-----eEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK-----CMF 163 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 163 (361)
.|...+.+|.|+||.||+|... +++.||||+.-.+..-. ..|+.+|+.++|||||++.-+|.... ...
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 3566788999999999999765 46899999886554321 27899999999999999999887643 346
Q ss_pred EEEEeccCCChhhhhccC-CccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC-CCeEEeeecCcc
Q 042457 164 LIYKYMRRGSLFCVLRND-DEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK-LEAFVADFGVAR 241 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfg~~~ 241 (361)
+|||||+. +|...++.. .....++...+.-+..||.+||+|||+. +|+||||||.|+|+|.+ |.+||+|||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999987 888877741 1123577788889999999999999998 99999999999999987 899999999999
Q ss_pred ccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC-------
Q 042457 242 LLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA------- 313 (361)
Q Consensus 242 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------- 313 (361)
.+.....+ .....|..|.|||.+.+ ..|+.+.||||.||++.||+-|++-|.+.+..++-....+++....
T Consensus 175 ~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 175 VLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred eeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 88766555 44567889999998775 5799999999999999999999999987665332222222221100
Q ss_pred --C-----CCCCCh------hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 314 --P-----SPIDDQ------TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 314 --~-----~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
. .+.... ..........+|+.++++++|.+|.|+.|++.||||++
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFde 311 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDE 311 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHH
Confidence 0 000000 00111234789999999999999999999999999975
No 179
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.5e-43 Score=307.48 Aligned_cols=252 Identities=24% Similarity=0.382 Sum_probs=205.2
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc---hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET---ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
+|+..+.||+|++|.||+|... +++.|++|.+..... ..+..+.+..|+.+++.++|+|++++++++......+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4667788999999999999775 789999999865432 233457788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999997654 588999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCCcccccccccccccccccccc-cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc-ccCCCCCCChhhH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMV-VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD-QRAPSPIDDQTVI 323 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 323 (361)
.. ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||...... ........ ...+. ...
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~-~~~---- 225 (258)
T cd06632 155 FS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV---AAVFKIGRSKELPP-IPD---- 225 (258)
T ss_pred cc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH---HHHHHHHhcccCCC-cCC----
Confidence 33 223345788999999887766 899999999999999999999998754421 11111111 11111 110
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.....+.+++.+||+.+|++|||+.+++.|||+
T Consensus 226 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 226 HLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred CcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 011247789999999999999999999999997
No 180
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.9e-43 Score=314.48 Aligned_cols=261 Identities=27% Similarity=0.384 Sum_probs=206.5
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|++.+.||+|++|.||+|... +++.||+|.++.........+.+.+|+++++.++|+||+++++++...+..++++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999765 58899999987654444445778899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|++++.+..+..... .+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 81 YVERTLLELLEASPG---GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred cCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 999877776665433 489999999999999999999999 99999999999999999999999999988765443
Q ss_pred C-Cccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc---------------
Q 042457 248 S-NRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD--------------- 310 (361)
Q Consensus 248 ~-~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~--------------- 310 (361)
. ......++..|+|||++.+. .++.++||||||+++|+|++|+.||......+..........
T Consensus 155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence 2 22334578889999998887 889999999999999999999999875432111000000000
Q ss_pred --c-cCCCCCCChhhH------HHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 311 --Q-RAPSPIDDQTVI------QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 311 --~-~~~~~~~~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
. ..+.. ...... .....+.+++++||+.+|++|||++++++||||
T Consensus 235 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 235 FAGVAFPEP-SQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccccccCCC-CCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0 00000 000000 013458899999999999999999999999998
No 181
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-46 Score=310.73 Aligned_cols=254 Identities=29% Similarity=0.454 Sum_probs=216.3
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
-|.++.+||+|+||.||++.+ ..|+.+|||.+..... ++++..|+.+|++.+.+++|++||.+.....+|+||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD----LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD----LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch----HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 366788899999999999954 4799999999876543 57888999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
|.-|+..+.++..+. ++++.++..++.+.+.||+|||.. .-+|||||+.|||++.+|.+||+|||.+..+...-.
T Consensus 110 CGAGSiSDI~R~R~K--~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 110 CGAGSISDIMRARRK--PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred cCCCcHHHHHHHhcC--CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHH
Confidence 999999999986554 799999999999999999999999 889999999999999999999999999987765555
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIIL 328 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (361)
.+....||+-|||||++..-.|..++||||||+...||..|++||.+...... .-.+-..++.....+..|.. .
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA----IFMIPT~PPPTF~KPE~WS~--~ 258 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA----IFMIPTKPPPTFKKPEEWSS--E 258 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce----eEeccCCCCCCCCChHhhhh--H
Confidence 56667899999999999999999999999999999999999999886654221 11111222222333333333 5
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
+.+++++||-++|++|-|+.++++|||++.
T Consensus 259 F~DFi~~CLiK~PE~R~TA~~L~~H~Fikn 288 (502)
T KOG0574|consen 259 FNDFIRSCLIKKPEERKTALRLCEHTFIKN 288 (502)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhhhhhhcC
Confidence 889999999999999999999999999986
No 182
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2e-43 Score=310.55 Aligned_cols=254 Identities=24% Similarity=0.334 Sum_probs=208.8
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
+|++.+.||.|+||.||++... +++.||+|.+..... .....+.+.+|++.+++++||||+++++.+...+..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999765 589999999875432 22345788999999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++++|.+++.... .+++..+..++.|+++||.|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQKV---KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 999999999997653 688999999999999999999999 99999999999999999999999999987654332
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
......++..|+|||.+.+..++.++|+||||+++|+|++|+.||......................+.. ...
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 227 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPAT------WST 227 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCccc------CcH
Confidence 2233457889999999988889999999999999999999999987654321222222222111211111 113
Q ss_pred HHHHHHhhhcCCCCCCCCCc--cccccCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPTM--RRSFPNPEI 356 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~--~eil~hp~~ 356 (361)
.+.+++.+||+.||.+||++ +|+++||||
T Consensus 228 ~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 228 EAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 58899999999999999999 999999998
No 183
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.1e-43 Score=321.51 Aligned_cols=259 Identities=23% Similarity=0.306 Sum_probs=203.5
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|.+.+.||+|+||.||+++.. +++.||+|.+..... .......+..|..++..++|+||+++++++...+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999764 678899999865321 2223456788999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 99999999999976332 588899999999999999999999 9999999999999999999999999999766433
Q ss_pred CC-Ccccccccccccccccccc-----cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc--CCCCCC
Q 042457 247 SS-NRTVVAGTHGYIAPELAYT-----MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR--APSPID 318 (361)
Q Consensus 247 ~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~ 318 (361)
.. ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+.... .+.+..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---~~~~~~i~~~~~~~~~p~~ 232 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL---VETYGKIMNHEERFQFPSH 232 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH---HHHHHHHHcCCCcccCCCc
Confidence 22 2233468999999998865 4678899999999999999999999874332 11222222211 111111
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCC--CCCccccccCCCCCC
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKS--RPTMRRSFPNPEINP 358 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~hp~~~~ 358 (361)
.. .....+.+++.+|+..++.+ |++++++++||||+.
T Consensus 233 ~~---~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 233 IT---DVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred cc---cCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 11 11224778888988876554 579999999999975
No 184
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=5.9e-43 Score=310.87 Aligned_cols=253 Identities=29% Similarity=0.460 Sum_probs=206.7
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
-|++.+.||+|+||.||+|.. .++..||+|........ .....+.+|+..+++++|+||+++++++..++..++||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 467788899999999999965 46889999988654432 2346788999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++... .+++..+..++.+++.++.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 84 ~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 84 LGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence 9999999998653 488999999999999999999999 999999999999999999999999999876644333
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIIL 328 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (361)
......++..|+|||.+.+..++.++|+||||+++|+|++|..||..... ......+.....+. ... .....
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~-~~~----~~~~~ 228 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP---MKVLFLIPKNNPPT-LEG----NYSKP 228 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch---HHHHHHHhcCCCCC-CCc----ccCHH
Confidence 33334578899999999888889999999999999999999999864332 11111121121111 111 11224
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
+.+++.+||+.+|.+||++.++++||||.+
T Consensus 229 ~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~ 258 (277)
T cd06641 229 LKEFVEACLNKEPSFRPTAKELLKHKFIVR 258 (277)
T ss_pred HHHHHHHHccCChhhCcCHHHHHhCHHHhh
Confidence 788999999999999999999999999975
No 185
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=6.3e-43 Score=306.85 Aligned_cols=254 Identities=22% Similarity=0.374 Sum_probs=206.2
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|+..+.||+|+||.||++.. .+++.+|+|.+............+..|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477889999999999999965 4688999999876554444467889999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC-CCeEEeeecCccccCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK-LEAFVADFGVARLLHSDS 247 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfg~~~~~~~~~ 247 (361)
+++++|.+++..... ..+++..+..++.+++.|++|||++ +++|+||+|+||+++++ +.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRCN-SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 999999999976432 2578999999999999999999999 99999999999999865 457999999998764432
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ................. . ...
T Consensus 157 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~----~~~ 227 (256)
T cd08220 157 K-AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL---PALVLKIMSGTFAPISD-R----YSP 227 (256)
T ss_pred c-ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch---HHHHHHHHhcCCCCCCC-C----cCH
Confidence 2 2234578899999999888889999999999999999999999865432 22222222222211111 1 112
Q ss_pred HHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.+.+++.+||+.+|++|||+.|+++||||
T Consensus 228 ~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 228 DLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 47899999999999999999999999997
No 186
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.3e-43 Score=309.78 Aligned_cols=258 Identities=25% Similarity=0.438 Sum_probs=202.8
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc--------hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET--------ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK 160 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 160 (361)
+|...+.||+|+||.||+|.. .+|+.+|+|.+..... .....+.+..|+.+++.++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 466778899999999999964 4689999998864321 1123456888999999999999999999999999
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
..++|+||+++++|.++++... .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 9999999999999999997763 689999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCC--Ccccccccccccccccccccc--cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCC
Q 042457 241 RLLHSDSS--NRTVVAGTHGYIAPELAYTMV--VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSP 316 (361)
Q Consensus 241 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 316 (361)
........ ......++..|+|||.+.+.. ++.++|+||||+++||+++|..||...... ....+.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~ 232 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI---AAMFKLGNKRSAPP 232 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH---HHHHHhhccccCCc
Confidence 76533211 122345788999999887654 788999999999999999999998643221 11111111111111
Q ss_pred CCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 317 IDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
............+.+++.+||+++|++|||++++++|||+
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 233 IPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred CCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 1111111122358889999999999999999999999997
No 187
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.3e-43 Score=318.41 Aligned_cols=267 Identities=28% Similarity=0.349 Sum_probs=203.2
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--CeEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KCMFL 164 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 164 (361)
.++|++.+.||+|+||.||+|... +|+.||+|.+............+.+|+.++++++|+|++++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467899999999999999999764 689999999875543322224566899999999999999999998765 56899
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
||||+.+ +|.+++.... ..+++.++..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++....
T Consensus 86 v~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 9999964 7888876543 2689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc-----------
Q 042457 245 SDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR----------- 312 (361)
Q Consensus 245 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~----------- 312 (361)
..........++..|+|||.+.+ ..++.++||||||+++|||++|+.||...................
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcc
Confidence 43333333345778999998765 557899999999999999999999987543321111111110000
Q ss_pred -----C--C-CCCCC-hh-hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCCC
Q 042457 313 -----A--P-SPIDD-QT-VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPSL 360 (361)
Q Consensus 313 -----~--~-~~~~~-~~-~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~~ 360 (361)
. . .+... .. .......+.+++.+||+.||++|||++|+++||||++.-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 0 0 00000 00 000123467899999999999999999999999998643
No 188
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=8e-43 Score=311.29 Aligned_cols=262 Identities=24% Similarity=0.329 Sum_probs=205.1
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|++.+.||+|++|.||+|... +|+.||+|++............+.+|+.++++++|+|++++++++...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999764 689999999977654334457788999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+ +++|.+++.... ..+++.+++.++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 999999987544 2589999999999999999999999 999999999999999999999999999987654332
Q ss_pred -Cccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc--------------
Q 042457 249 -NRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR-------------- 312 (361)
Q Consensus 249 -~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------------- 312 (361)
......++..|+|||.+.+. .++.++||||+|+++|||++|+.||...................
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 12234578899999987654 46889999999999999999988875433211000000000000
Q ss_pred --CCCCCCChhhH-----HHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 313 --APSPIDDQTVI-----QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 313 --~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
...+....... .....+.+++.+||+.+|++|||++++++||||.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 00000000000 1124588999999999999999999999999984
No 189
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2e-43 Score=316.86 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=203.0
Q ss_pred cCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCC
Q 042457 94 KYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
...||+|+||.||++... +++.||+|.+....... .+.+.+|+..++.++|||++++++++..++..++++||++++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~ 103 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR--RELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG 103 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccch--HHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence 446999999999999654 68999999986544322 366889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCccc
Q 042457 173 SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252 (361)
Q Consensus 173 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 252 (361)
+|.+++... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++............
T Consensus 104 ~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 176 (297)
T cd06659 104 ALTDIVSQT----RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 176 (297)
T ss_pred CHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence 999887543 488999999999999999999999 9999999999999999999999999998765444333344
Q ss_pred ccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHH
Q 042457 253 VAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKI 332 (361)
Q Consensus 253 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 332 (361)
..++..|+|||++.+..++.++||||||+++|||++|+.||..... ......+........... ......+.++
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~l~~~ 250 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP---VQAMKRLRDSPPPKLKNA---HKISPVLRDF 250 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhccCCCCcccc---CCCCHHHHHH
Confidence 5688999999999888899999999999999999999999864332 111111111111111110 0111247889
Q ss_pred HhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 333 AFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 333 i~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
+.+||+.+|++|||++++++||||.+-
T Consensus 251 i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 251 LERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred HHHHhcCCcccCcCHHHHhhChhhccC
Confidence 999999999999999999999999753
No 190
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4e-43 Score=311.20 Aligned_cols=258 Identities=28% Similarity=0.439 Sum_probs=205.7
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCC----
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKK---- 160 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~---- 160 (361)
++++|++.+.||+|++|.||+|... +++.+++|.+...... .+.+..|+.+++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE---EEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchh---HHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 5678999999999999999999764 5788999998765432 36788999999999 7999999999997644
Q ss_pred --eEEEEEEeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeee
Q 042457 161 --CMFLIYKYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADF 237 (361)
Q Consensus 161 --~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 237 (361)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCC
Confidence 4899999999999999886532 123689999999999999999999999 9999999999999999999999999
Q ss_pred cCccccCCCCCCcccccccccccccccccc-----cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc
Q 042457 238 GVARLLHSDSSNRTVVAGTHGYIAPELAYT-----MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR 312 (361)
Q Consensus 238 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 312 (361)
|++..............++..|+|||.+.. ..++.++||||||+++|+|++|+.||..... ......+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~ 234 (275)
T cd06608 158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP---MRALFKIPRNP 234 (275)
T ss_pred ccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch---HHHHHHhhccC
Confidence 998766443333344568889999998753 3467899999999999999999999864322 12222222222
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 313 APSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.+. .... ......+.+++.+||+.||++|||+.|+++|||+
T Consensus 235 ~~~-~~~~--~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 235 PPT-LKSP--ENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred CCC-CCch--hhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 111 1111 1122357899999999999999999999999996
No 191
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1e-42 Score=310.60 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=205.2
Q ss_pred CCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEec
Q 042457 91 FDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
|...+.||+|++|.||++.. .+++.+++|++....... .+.+.+|+.+++.++|+|++++++++...+..++++||+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR--RELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH--HHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence 44557899999999999975 478899999886543322 356889999999999999999999999999999999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 249 (361)
++++|.+++... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++.........
T Consensus 99 ~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~ 171 (285)
T cd06648 99 EGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR 171 (285)
T ss_pred CCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc
Confidence 999999998762 588999999999999999999999 9999999999999999999999999988765443333
Q ss_pred cccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHH
Q 042457 250 RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILV 329 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 329 (361)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ............+..... ......+
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~l 245 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP---LQAMKRIRDNLPPKLKNL---HKVSPRL 245 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH---HHHHHHHHhcCCCCCccc---ccCCHHH
Confidence 3344588899999999888899999999999999999999999864322 111222222211111111 0112258
Q ss_pred HHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 330 SKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 330 ~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.+++.+||+.+|++|||+.++++||||++
T Consensus 246 ~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 274 (285)
T cd06648 246 RSFLDRMLVRDPAQRATAAELLNHPFLAK 274 (285)
T ss_pred HHHHHHHcccChhhCcCHHHHccCccccc
Confidence 89999999999999999999999999975
No 192
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.5e-43 Score=311.14 Aligned_cols=265 Identities=27% Similarity=0.359 Sum_probs=206.1
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--CeEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KCMFLI 165 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 165 (361)
++|+..+.||.|++|.||++... +++.+|+|.+...... .....+.+|++++++++||||+++++++... +..++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 36788899999999999999764 6889999998755432 3357788999999999999999999998653 468999
Q ss_pred EEeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 166 YKYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
|||+++++|.+++.... ....++...+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999999998875421 223578899999999999999999999 99999999999999999999999999986543
Q ss_pred CCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCccc--CCcchhHhhhhcccCCCCCCC-hh
Q 042457 245 SDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSS--FNPKIMLIDLLDQRAPSPIDD-QT 321 (361)
Q Consensus 245 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~ 321 (361)
.... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ...............+..... ..
T Consensus 157 ~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd06621 157 NSLA--GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGN 234 (287)
T ss_pred cccc--ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCC
Confidence 2221 223467889999999888899999999999999999999999875532 111111111121111111110 10
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 322 VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 322 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.......+.+++.+||+.+|++|||+.|+++||||++.
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred CCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 01112358899999999999999999999999999753
No 193
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-44 Score=294.93 Aligned_cols=261 Identities=22% Similarity=0.337 Sum_probs=209.8
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEE-eCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC---
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQ-LPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK--- 160 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--- 160 (361)
.+..++|.+.+.||+|||+-||.++ ..++..+|+|++.....+ ..+..++|++..++++|||++++++++..+.
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~--~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQE--DIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchH--HHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 3567889999999999999999995 567889999999887743 3588899999999999999999999886543
Q ss_pred --eEEEEEEeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeee
Q 042457 161 --CMFLIYKYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADF 237 (361)
Q Consensus 161 --~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 237 (361)
+.|++++|...|+|.+.++... ....+++.++++|+.++++||.+||+.. ++++|+||||.|||+.+++.++|.||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEec
Confidence 4999999999999999987643 2336899999999999999999999882 24999999999999999999999999
Q ss_pred cCccccCCCCCC---------ccccccccccccccccc---ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhH
Q 042457 238 GVARLLHSDSSN---------RTVVAGTHGYIAPELAY---TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIML 305 (361)
Q Consensus 238 g~~~~~~~~~~~---------~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 305 (361)
|.++...-.... ......|..|.|||.+. +...++++|||||||+||+|+.|..||+.... ......
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~-~GgSla 252 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ-QGGSLA 252 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-cCCeEE
Confidence 998765332211 12234788999999875 44578899999999999999999999986554 222233
Q ss_pred hhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 306 IDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
..+...+...|.... ..+.+.+++++|++.||.+||++.+++.+
T Consensus 253 LAv~n~q~s~P~~~~----yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 253 LAVQNAQISIPNSSR----YSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred EeeeccccccCCCCC----ccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 334444444443332 22358899999999999999999999864
No 194
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.2e-43 Score=310.80 Aligned_cols=252 Identities=26% Similarity=0.462 Sum_probs=206.0
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
.+..+|.+.+.||+|+||.||+|...++..+++|.+....... ...+..|+.+++.++|+||+++++++...+..++|
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLK--QQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhh--HHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 3456788899999999999999998889999999987654422 36788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+++++|.+++.+... ..+++.++..++.|++.|+.|||+. +++|+||+|+||++++++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 81 TELMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred EeecccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 999999999999976432 3589999999999999999999999 999999999999999999999999999977644
Q ss_pred CCCCcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcc-cCCCCCCChhhH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQ-RAPSPIDDQTVI 323 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 323 (361)
.........++..|+|||.+.+..++.++||||||+++|+|++ |+.||..... ......+... ..+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~----- 228 (261)
T cd05148 157 DVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---HEVYDQITAGYRMPCPAK----- 228 (261)
T ss_pred ccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHHHhCCcCCCCCC-----
Confidence 3332233345678999999988889999999999999999998 8999865432 1122222222 1111111
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
....+.+++.+||+.||.+|||++++++
T Consensus 229 -~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 229 -CPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred -CCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 1124789999999999999999999875
No 195
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.3e-43 Score=312.64 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=201.9
Q ss_pred cCCCCcCeeeecCceeEEEEEeCC------CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLPS------GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 162 (361)
++|++.+.||+|+||.||+|.... ...||+|.+..... ......+.+|+..++.++||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE-PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC-HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 468888999999999999997533 25799999875543 23356788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhccCCc-------------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC
Q 042457 163 FLIYKYMRRGSLFCVLRNDDE-------------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK 229 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~ 229 (361)
+++|||+++++|.+++..... ...+++..++.++.|++.||+|||+. +++|+||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCC
Confidence 999999999999999865321 13588999999999999999999999 99999999999999999
Q ss_pred CCeEEeeecCccccCCCCC--CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHh
Q 042457 230 LEAFVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLI 306 (361)
Q Consensus 230 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 306 (361)
+.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||..... .....
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~---~~~~~ 237 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN---QEVIE 237 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHH
Confidence 9999999999876533221 1222346788999999988889999999999999999998 9999875432 12222
Q ss_pred hhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 307 DLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.+...... +.. ......+.+|+.+||+.||.+|||++||+++
T Consensus 238 ~i~~~~~~-~~~----~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 238 MIRSRQLL-PCP----EDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHcCCcC-CCc----ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 22222221 111 1112358899999999999999999999875
No 196
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.3e-43 Score=316.05 Aligned_cols=262 Identities=23% Similarity=0.276 Sum_probs=203.0
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--CeEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KCMFLI 165 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 165 (361)
++|++.+.||+|+||.||+|... +++.+++|.++...........+.+|+.++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999775 588999999976554433345677899999999999999999999877 889999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
+||++ ++|.+++..... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 85 ~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99997 489888876442 589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc-------------
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ------------- 311 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~------------- 311 (361)
.........++..|+|||.+.+. .++.++|+||||+++|||++|+.||......+...........
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 43333344578899999988654 4688999999999999999999998754321111000000000
Q ss_pred -----cCCCCCC----ChhhHH-HHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 312 -----RAPSPID----DQTVIQ-DIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 312 -----~~~~~~~----~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
....... ...... ....+.+++.+||+.||++|||+.|+++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 0000000 000000 12347889999999999999999999999998
No 197
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.3e-42 Score=314.71 Aligned_cols=254 Identities=24% Similarity=0.346 Sum_probs=187.9
Q ss_pred CeeeecCceeEEEEEeC---CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee--CCeEEEEEEec
Q 042457 95 YCIGTGGYGSVYRAQLP---SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH--KKCMFLIYKYM 169 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~ 169 (361)
.+||+|+||.||+|... ++..||+|.+...... ..+.+|+.+++.++||||+++++++.. ....++++||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS----MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc----HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 57999999999999764 3578999998754332 456789999999999999999998864 45789999998
Q ss_pred cCCChhhhhccC------CccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeee----CCCCCeEEeeecC
Q 042457 170 RRGSLFCVLRND------DEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILL----NSKLEAFVADFGV 239 (361)
Q Consensus 170 ~~g~L~~~l~~~------~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill----~~~~~~kl~Dfg~ 239 (361)
.+ +|.+++... .....+++..+..++.|++.||.|||+. +++||||||+|||+ +.++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 65 777666421 1223588999999999999999999999 99999999999999 5567899999999
Q ss_pred ccccCCCCC---Ccccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCc------chhHhhhh
Q 042457 240 ARLLHSDSS---NRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNP------KIMLIDLL 309 (361)
Q Consensus 240 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~------~~~~~~~~ 309 (361)
++....... ......+|..|+|||.+.+ ..++.++||||||+++|||+||+.||........ ........
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 986643322 1233467899999998876 4578999999999999999999999864322100 00000000
Q ss_pred cc--------------cCC----------CCCCChhhH--------HHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 310 DQ--------------RAP----------SPIDDQTVI--------QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 310 ~~--------------~~~----------~~~~~~~~~--------~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.. ... ......... .....+.+|+.+||+.||.+|||+.|+++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 000 000000000 001236789999999999999999999999998
No 198
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.2e-43 Score=314.03 Aligned_cols=261 Identities=23% Similarity=0.340 Sum_probs=200.0
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|++.+.||+|++|.||+|... +++.||+|.+....... ....+.+|+++++.++|+||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 56888899999999999999765 68899999986543221 12446689999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++ +|.+++..... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++......
T Consensus 84 ~~~~-~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 84 YLDT-DLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred cCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 9975 89888875443 578999999999999999999999 99999999999999999999999999987553332
Q ss_pred CCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcch-hHhhhhccc-------------
Q 042457 248 SNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKI-MLIDLLDQR------------- 312 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-~~~~~~~~~------------- 312 (361)
.......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.......... ...+.....
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 22223346788999998765 457889999999999999999999986443110000 000000000
Q ss_pred -----CCCCCCCh-----hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 313 -----APSPIDDQ-----TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 313 -----~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
........ ........+.+++.+||+.+|++|||+.|+++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00000000 000111346789999999999999999999999998
No 199
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.1e-43 Score=317.78 Aligned_cols=251 Identities=24% Similarity=0.418 Sum_probs=198.5
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCC----EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGK----IVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 162 (361)
..+|++.+.||+|+||.||+|.+. +|+ .||+|.+..... ....+.+..|+.+++.++||||++++|+|... ..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 456899999999999999999753 333 489999875433 23346788999999999999999999999875 47
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++++||+++|+|.+++..... .+++..++.++.|++.||+|||+. +++||||||+|||+++++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeeecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 899999999999999986543 578899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc--ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 243 LHSDSSNR--TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 243 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
........ ....++..|+|||.+.+..++.++||||||+++|||++ |+.||+...... ...........+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~----~~~~~~~~~~~~~~~ 234 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISSILEKGERLPQPP 234 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH----HHHHHhCCCCCCCCC
Confidence 65433221 11224668999999999999999999999999999998 999987543211 122222221111111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
. ....+.+++.+||+.||.+|||+.+++.+
T Consensus 235 ~----~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 235 I----CTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred C----CCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1 11247889999999999999999999865
No 200
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.8e-43 Score=310.19 Aligned_cols=251 Identities=25% Similarity=0.423 Sum_probs=202.6
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
..++|++.++||+|+||.||+|...++..||+|.+...... .+.+..|+.+++.++|+||+++++.+...+..+++|
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchh---HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 45678999999999999999999888889999998654332 367889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 81 EYMAKGSLLDFLKSDEG-GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred ecCCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 99999999999875432 2588899999999999999999999 9999999999999999999999999999876432
Q ss_pred CCC-cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 247 SSN-RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 247 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
... .....++..|+|||.+.+..++.++||||||+++|+|+| |+.||..... ......+... ...+....
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~~~~~~~-~~~~~~~~---- 228 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN---SDVMSALQRG-YRMPRMEN---- 228 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH---HHHHHHHHcC-CCCCCCCC----
Confidence 211 122335678999999988889999999999999999998 9999864332 1122222222 11111111
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
....+.+++.+||+.+|++|||++++.+
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 229 CPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1124788999999999999999999864
No 201
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=8.2e-43 Score=306.37 Aligned_cols=249 Identities=23% Similarity=0.421 Sum_probs=201.5
Q ss_pred cCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
++|.+.+.||+|+||.||+|.+.++..+|+|.+...... .+.+.+|+.++++++||||+++++++...+..+++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 457888899999999999998877778999998754432 25688999999999999999999999998889999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++..... .+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||.++.......
T Consensus 81 ~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 81 MSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred CCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 999999999976433 589999999999999999999999 999999999999999999999999999876543322
Q ss_pred Cc-ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 249 NR-TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 249 ~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
.. ....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+........... ..
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~-----~~ 227 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN---SETVEKVSQGLRLYRPHL-----AS 227 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHHhcCCCCCCCCC-----CC
Confidence 11 12235568999999988889999999999999999999 9999865432 112222222222111111 11
Q ss_pred HHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
..+.+++.+||+.||.+|||+.+++++
T Consensus 228 ~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 228 EKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 358899999999999999999999865
No 202
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=9e-43 Score=307.90 Aligned_cols=257 Identities=21% Similarity=0.290 Sum_probs=203.9
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCc-chHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSE-TELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|.+.+.||+|+||.||+|... +++.||||.+.... ........+..|+++++.++|||++++++++...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47889999999999999999754 78999999876533 23333467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 167 KYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
||+++++|.+++.... ....++...+..++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999998886422 123578899999999999999999999 999999999999999999999999999877654
Q ss_pred CCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
.........++..|+|||.+.+..++.++|+||||+++|||++|+.||..... ...... .........+.. ....
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~-~~~~~~-~~~~~~~~~~~~---~~~~ 233 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLFSLC-QKIEQCDYPPLP---TEHY 233 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc-cHHHHH-HHHhcCCCCCCC---hhhc
Confidence 33333344578899999999888889999999999999999999999854321 111111 122211111111 1112
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
...+.+++.+||+.+|++|||+.++++.
T Consensus 234 ~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 234 SEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred CHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 2358899999999999999999999864
No 203
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5e-43 Score=313.53 Aligned_cols=261 Identities=23% Similarity=0.283 Sum_probs=199.6
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
++++|.+.+.||+|+||.||+|.. .+|+.||+|.+....... ....+.+|+.+++.++|+||+++++++...+..++|
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG-VPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC-CcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 356799999999999999999965 468899999986543221 123567899999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
+||+. +++.+++..... .+.+..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++....
T Consensus 82 ~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred Eeccc-CCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 99996 677666654322 477888999999999999999999 999999999999999999999999999876543
Q ss_pred CCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc--------------
Q 042457 246 DSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD-------------- 310 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~-------------- 310 (361)
.........++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ...+.....
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 156 PSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV--FEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHHHHHHcCCCChhhhhhhh
Confidence 3333333457889999998865 35788999999999999999999998754321 000000000
Q ss_pred -------ccCCC--CCCChh---hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 311 -------QRAPS--PIDDQT---VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 311 -------~~~~~--~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
..... +..... .......+.+++.+|++.||.+|||++|++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00000 000000 00112347789999999999999999999999998
No 204
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.5e-43 Score=312.05 Aligned_cols=258 Identities=26% Similarity=0.405 Sum_probs=211.5
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
.++.|+..+.||+|++|.||+|... ++..+++|++..... ..+.+..|++.++.++|+|++++++.+...+..+++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4566888888999999999999776 688999999976544 246788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
+||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 94 MEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred EeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 99999999999998754 3689999999999999999999998 999999999999999999999999999876544
Q ss_pred CCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
.........++..|+|||.+.+..++.++|+||||+++|+|++|+.||...... .....+.....+.... . ...
T Consensus 169 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~-~--~~~ 242 (286)
T cd06614 169 EKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL---RALFLITTKGIPPLKN-P--EKW 242 (286)
T ss_pred chhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcCCCCCcc-h--hhC
Confidence 333333345778999999998888999999999999999999999998654321 1122222222211111 1 001
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
...+.+++.+||+.+|.+|||+.++++||||++
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 243 SPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 234889999999999999999999999999976
No 205
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.5e-43 Score=310.60 Aligned_cols=256 Identities=23% Similarity=0.354 Sum_probs=202.0
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK 159 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 159 (361)
+.+++|++.+.||+|+||.||+|... .+..||+|.+...... .....+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM-RERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 46778999999999999999998653 3567999998654332 2346788999999999999999999999999
Q ss_pred CeEEEEEEeccCCChhhhhccCCc-------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCe
Q 042457 160 KCMFLIYKYMRRGSLFCVLRNDDE-------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEA 232 (361)
Q Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~ 232 (361)
...++||||+++++|.+++..... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCE
Confidence 999999999999999999865321 22468889999999999999999999 99999999999999999999
Q ss_pred EEeeecCccccCCCCCCc--ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhh
Q 042457 233 FVADFGVARLLHSDSSNR--TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLL 309 (361)
Q Consensus 233 kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 309 (361)
+|+|||++.......... ....++..|+|||.+.+..++.++||||||+++|||++ |..||..... ........
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~---~~~~~~~~ 235 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN---EQVLRFVM 235 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHH
Confidence 999999987654322211 12235678999999988889999999999999999999 7888864332 22222222
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 310 DQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.......... ....+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 236 EGGLLDKPDN-----CPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred cCCcCCCCCC-----CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2222111111 11248899999999999999999999864
No 206
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.5e-42 Score=306.24 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=201.8
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCc---chHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--CeE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSE---TELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KCM 162 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 162 (361)
++|.+.+.||+|+||.||+|.. .+|..||+|.+.... ......+.+.+|+.++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 5788899999999999999976 458999999886432 1223356788999999999999999999988764 468
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
+++|||+++++|.+++.... .+++...++++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999987543 478889999999999999999999 999999999999999999999999999876
Q ss_pred cCCCC---CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 243 LHSDS---SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 243 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
..... .......++..|+|||.+.+..++.++||||||+++|||++|+.||..... ............ .+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~-~~~~- 230 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA---MAAIFKIATQPT-NPVL- 230 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch---HHHHHHHhcCCC-CCCC-
Confidence 53221 112234578899999999888899999999999999999999999875422 111122211111 1111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
.......+.+++.+|+. +|++|||++|+++|||+.
T Consensus 231 --~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 231 --PPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred --chhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 11122347788889985 999999999999999984
No 207
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3e-43 Score=346.50 Aligned_cols=265 Identities=21% Similarity=0.341 Sum_probs=207.0
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--Ce
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KC 161 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~ 161 (361)
....++|.+.+.||+|+||.||++... ++..||+|.+............+..|+.+++.++||||+++++++... ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 445578999999999999999999664 577899999876554444457889999999999999999999988653 56
Q ss_pred EEEEEEeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCC----CCeEEeCCCCCCeeeCC--------
Q 042457 162 MFLIYKYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCI----PSIVHRDISSNNILLNS-------- 228 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~----~~i~H~dlk~~Nill~~-------- 228 (361)
+|+||||+++++|.++|.... ....+++..++.|+.||+.||+|||+... .+|+|+||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 899999999999999987532 12368999999999999999999998521 25999999999999964
Q ss_pred ---------CCCeEEeeecCccccCCCCCCcccccccccccccccccc--cccCccchhhhHHHHHHHHHhCCCCCCCcc
Q 042457 229 ---------KLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT--MVVTEKCDVFGFGVVALEVLMGRHPGDLLS 297 (361)
Q Consensus 229 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 297 (361)
...+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||+||||+||+.||....
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 2348999999997654322 2233468999999998854 457899999999999999999999987433
Q ss_pred cCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 298 SFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.. ..+...+......+.... ...+.+|+..||+.+|.+|||+.|+|.||||+.
T Consensus 248 ~~---~qli~~lk~~p~lpi~~~-----S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 248 NF---SQLISELKRGPDLPIKGK-----SKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred cH---HHHHHHHhcCCCCCcCCC-----CHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 21 112222222222221111 124889999999999999999999999999974
No 208
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.1e-43 Score=314.03 Aligned_cols=265 Identities=22% Similarity=0.284 Sum_probs=200.6
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeCCe-----
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGFCLHKKC----- 161 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~----- 161 (361)
++|++.+.||+|+||.||+|... +|+.||+|..............+.+|+.+++.++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999764 6899999998765433333456788999999995 6999999999987665
Q ss_pred EEEEEEeccCCChhhhhccCCc--cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC-CCCeEEeeec
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDE--AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS-KLEAFVADFG 238 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfg 238 (361)
.+++|||+++ +|.+++..... ...+++..++.++.||+.||.|||+. +++|+||+|+||+++. ++.++|+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999985 78887764322 23689999999999999999999999 9999999999999998 8899999999
Q ss_pred CccccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc-----
Q 042457 239 VARLLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR----- 312 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~----- 312 (361)
++..............+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...................
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence 98765433332233356788999998765 457899999999999999999999986543211110000000000
Q ss_pred -----------CCC--CCCChh-hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 313 -----------APS--PIDDQT-VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 313 -----------~~~--~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
.+. +..... .......+.+++.+||++||.+|||++|+++||||+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 000 000000 001123478999999999999999999999999996
No 209
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.1e-42 Score=309.13 Aligned_cols=255 Identities=30% Similarity=0.498 Sum_probs=205.5
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC---CCcceeeeEEEeeCCeEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIR---HRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv 165 (361)
.|+..+.||+|+||.||+|.. .+++.||+|.+...... .....+.+|+.+++.++ |||++++++++......+++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD-DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc-hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 467788899999999999975 57899999998654332 22466788999999886 99999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+++++|.++++.. .+++...+.++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 81 MEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred EecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 9999999999998654 589999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
.........|+..|+|||.+.+ ..++.++|+||||+++|+|++|+.||......... .......+.......
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~--- 226 (277)
T cd06917 154 NSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM----MLIPKSKPPRLEDNG--- 226 (277)
T ss_pred CccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh----hccccCCCCCCCccc---
Confidence 4433344568889999998765 44688999999999999999999998754321111 111111111111110
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
....+.+++.+||+.||++|||+.+++.||||++.
T Consensus 227 ~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~ 261 (277)
T cd06917 227 YSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH 261 (277)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence 12358889999999999999999999999999764
No 210
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.7e-43 Score=307.78 Aligned_cols=252 Identities=23% Similarity=0.418 Sum_probs=203.0
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
+..++|++.+.||+|++|.||+|...+++.||+|.++..... .+.+.+|+.++++++|+|++++++++...+..+++
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD---PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCccc---HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeee
Confidence 456678999999999999999998878888999998765432 35688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+++++|.+++.... ...+++..+..++.|++.|+.|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 80 TELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred eecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 99999999999997644 23589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCc-ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhH
Q 042457 246 DSSNR-TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVI 323 (361)
Q Consensus 246 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
..... .....+..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+... ...+...
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~~-~~~~~~~---- 227 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN---AEVLQQVDQG-YRMPCPP---- 227 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcC-CCCCCCC----
Confidence 22211 11123457999999988889999999999999999999 9999864332 1122222222 1111111
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.....+.+++.+||+.+|.+||+++++++
T Consensus 228 ~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 228 GCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred cCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 11235889999999999999999999864
No 211
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1e-42 Score=311.16 Aligned_cols=261 Identities=23% Similarity=0.336 Sum_probs=206.6
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH 158 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 158 (361)
++..++|++.+.||+|+||.||+|... .+..||+|.+....... ....+.+|+..++.++|+||+++++++..
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHVVRLLGVVSK 80 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH-HHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 356788999999999999999999643 24579999987554322 23567889999999999999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhccCCc-------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCC
Q 042457 159 KKCMFLIYKYMRRGSLFCVLRNDDE-------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLE 231 (361)
Q Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~ 231 (361)
.+..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~ 157 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFT 157 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCc
Confidence 9999999999999999999965321 23467788999999999999999999 9999999999999999999
Q ss_pred eEEeeecCccccCCCCCCc--ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhh
Q 042457 232 AFVADFGVARLLHSDSSNR--TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDL 308 (361)
Q Consensus 232 ~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 308 (361)
++|+|||+++......... ....++..|+|||.+.+..++.++||||||+++|||++ |..||..... ......+
T Consensus 158 ~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~---~~~~~~~ 234 (288)
T cd05061 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---EQVLKFV 234 (288)
T ss_pred EEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHH
Confidence 9999999987654322211 11234678999999988889999999999999999999 7888864332 2222222
Q ss_pred hcccCC-CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc------CCCCCC
Q 042457 309 LDQRAP-SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP------NPEINP 358 (361)
Q Consensus 309 ~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~------hp~~~~ 358 (361)
...... .+... ...+.+++.+||+.||++|||+.++++ ||||+.
T Consensus 235 ~~~~~~~~~~~~------~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~ 285 (288)
T cd05061 235 MDGGYLDQPDNC------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 285 (288)
T ss_pred HcCCCCCCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence 222211 11111 125889999999999999999999987 999975
No 212
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-44 Score=328.82 Aligned_cols=255 Identities=24% Similarity=0.392 Sum_probs=210.8
Q ss_pred CCCcCeeeecCceeEEEEEeCC-CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEec
Q 042457 91 FDIKYCIGTGGYGSVYRAQLPS-GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
|.++..||.|+||.||++..++ +-..|-|++..... +.+++|+-|+++|..++||+||++++.|...+.++++.|||
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkse--EELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSE--EELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccch--hHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 4555669999999999997654 44556677655443 33789999999999999999999999999999999999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 249 (361)
.||-....+-.-+. .++..++.-+++|++.||.|||++ +|+|||||+.|||++-+|.++|+|||.+.........
T Consensus 112 ~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk 186 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK 186 (1187)
T ss_pred CCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHhh
Confidence 99999887755332 689999999999999999999999 9999999999999999999999999998665554555
Q ss_pred ccccccccccccccccc-----ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 250 RTVVAGTHGYIAPELAY-----TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
.....||+.|||||+.. ..+|+.++||||||+.|.||..+.+|-.. .++-..+..+....+|.....+ .|.
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe---lnpMRVllKiaKSePPTLlqPS-~Ws 262 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE---LNPMRVLLKIAKSEPPTLLQPS-HWS 262 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc---cchHHHHHHHhhcCCCcccCcc-hhh
Confidence 66678999999999865 46789999999999999999999999554 3444445555555554433322 222
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..+.++++.||.+||..||++.++|+||||+.
T Consensus 263 --~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~ 294 (1187)
T KOG0579|consen 263 --RSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN 294 (1187)
T ss_pred --hHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence 25889999999999999999999999999984
No 213
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=7.4e-43 Score=306.56 Aligned_cols=255 Identities=21% Similarity=0.358 Sum_probs=206.4
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|.+.+.||+|+||.||+|... +|..+|+|.+..........+.+.+|+.+++.++|+|++++++.+...+..++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778889999999999999765 578899999876533323346778999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCC-eEEeeecCccccCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLE-AFVADFGVARLLHSDS 247 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~-~kl~Dfg~~~~~~~~~ 247 (361)
+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++. ++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 999999999875432 2579999999999999999999999 9999999999999988854 6999999998765433
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
.......|+..|+|||.+.+..++.++|+||||+++||+++|+.||..... ................. ....
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~ 228 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL---HQLVLKICQGYFAPISP-----NFSR 228 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHhcccCCCCCC-----CCCH
Confidence 333334588899999998888899999999999999999999999864322 12222222222221111 0112
Q ss_pred HHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.+.+++.+||+.+|++|||++++++||||
T Consensus 229 ~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 229 DLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 48889999999999999999999999997
No 214
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6.6e-43 Score=311.47 Aligned_cols=261 Identities=22% Similarity=0.279 Sum_probs=200.7
Q ss_pred CCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEec
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
|++.+.||.|++|.||+|... +|..||+|++..........+.+.+|++.++.++|+|++++++++...+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567788999999999999764 7999999998765433333456788999999999999999999999999999999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 249 (361)
+ ++|.+++..... ..+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 155 (283)
T cd07835 81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT 155 (283)
T ss_pred C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence 5 689988865432 3589999999999999999999999 9999999999999999999999999999765433222
Q ss_pred ccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhh------------------hc
Q 042457 250 RTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDL------------------LD 310 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~------------------~~ 310 (361)
.....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||.............+. ..
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKP 235 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhh
Confidence 2333468889999987654 5688999999999999999999998654321110000000 00
Q ss_pred ccCCCCCCC--hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 311 QRAPSPIDD--QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 311 ~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
......... .........+.+++.+||+.||.+|||++|+++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 236 TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 000000000 0000011347899999999999999999999999998
No 215
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.2e-42 Score=307.05 Aligned_cols=251 Identities=29% Similarity=0.451 Sum_probs=202.0
Q ss_pred hcCCCCcCeeeecCceeEEEEEeCC----CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLPS----GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
.++|++.+.||+|+||.||+|.+.. ...||+|.+...... .....+..|+..+++++|+||+++++++...+..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSD-KQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCCh-HHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 4578899999999999999997742 457999998765433 23467889999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
++|||+++++|.+++..... .+++..+..++.|++.|++|||+. +++|+||||+||++++++.++|+|||++...
T Consensus 82 iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 82 IITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 99999999999999976543 689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcc-cCCCCCCC
Q 042457 244 HSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQ-RAPSPIDD 319 (361)
Q Consensus 244 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 319 (361)
...... .....++..|+|||.+.+..++.++||||||+++||+++ |..||..... ......+... ..+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~- 232 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN---QDVIKAVEDGYRLPPPMD- 232 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH---HHHHHHHHcCCCCCCCCC-
Confidence 422211 112234578999999988889999999999999999998 9999864332 1112222222 1121111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
....+.+++.+||+.+|++|||++|++++
T Consensus 233 -----~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 233 -----CPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred -----CCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 12247899999999999999999999865
No 216
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.3e-42 Score=309.50 Aligned_cols=260 Identities=23% Similarity=0.391 Sum_probs=199.1
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHH-HhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARL-LSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|++.+.||+|+||.||++... +|+.||+|++......... ..+..|+.. ++..+|||++++++++...+..+++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQ-KRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHH-HHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 46888999999999999999764 6899999998765433222 344455554 66678999999999999999999999
Q ss_pred EeccCCChhhhhccC-CccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 167 KYMRRGSLFCVLRND-DEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 167 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
||++ ++|.+++... .....+++..++.++.|++.||+|||++. +++|+||||+||+++.++.+||+|||++.....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9996 6887777542 22246899999999999999999999853 799999999999999999999999999876533
Q ss_pred CCCCcccccccccccccccccc----cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChh
Q 042457 246 DSSNRTVVAGTHGYIAPELAYT----MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQT 321 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (361)
.. ......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||..... .............+.....
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~-- 231 (283)
T cd06617 157 SV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT--PFQQLKQVVEEPSPQLPAE-- 231 (283)
T ss_pred cc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc--CHHHHHHHHhcCCCCCCcc--
Confidence 21 2222457888999998764 4468899999999999999999999864321 1111222222211111111
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 322 VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 322 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.....+.+++.+||+.+|.+|||++++++||||++.
T Consensus 232 --~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 232 --KFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred --ccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 111247899999999999999999999999999763
No 217
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=9.3e-43 Score=310.61 Aligned_cols=262 Identities=22% Similarity=0.330 Sum_probs=203.0
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|++.+.||+|++|.||+|... +|+.||+|.+....... ....+..|+.+++.++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG-TPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccccc-chHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 5788899999999999999775 68899999987654322 135567899999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++ +|.+++........+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 985 8888886654344689999999999999999999999 999999999999999999999999999976544333
Q ss_pred Ccccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhh-----------ccc----
Q 042457 249 NRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLL-----------DQR---- 312 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-----------~~~---- 312 (361)
......++..|++||.+.+ ..++.++||||||+++|+|++|+.||......+......+.. ...
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhc
Confidence 3333457889999998765 456889999999999999999999987543211100000000 000
Q ss_pred CCCCCCChhhH-----HHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 313 APSPIDDQTVI-----QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 313 ~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
...+....... .....+.+++.+|++.||.+|||+.|+++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 00000000000 112347899999999999999999999999998
No 218
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.8e-42 Score=305.19 Aligned_cols=248 Identities=26% Similarity=0.377 Sum_probs=203.8
Q ss_pred eeecCceeEEEEEeC-CCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCCh
Q 042457 97 IGTGGYGSVYRAQLP-SGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 97 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 174 (361)
||.|++|.||++... +++.+|+|.+...... ....+.+..|+.+++.++|+||+++++.+.+++..++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999775 4889999998754432 23346788999999999999999999999999999999999999999
Q ss_pred hhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCccccc
Q 042457 175 FCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254 (361)
Q Consensus 175 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 254 (361)
.+++.+.. .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~ 153 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFC 153 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-cccccc
Confidence 99997654 488999999999999999999998 99999999999999999999999999998764432 222345
Q ss_pred ccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc--ccCCCCCCChhhHHHHHHHHHH
Q 042457 255 GTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD--QRAPSPIDDQTVIQDIILVSKI 332 (361)
Q Consensus 255 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~l 332 (361)
++..|+|||.+.+..++.++|+||||+++|+|++|..||..... +.......+.. .....+... ...+.++
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 226 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-DPMEIYNDILKGNGKLEFPNYI------DKAAKDL 226 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-CHHHHHHHHhccCCCCCCCccc------CHHHHHH
Confidence 78899999998888899999999999999999999999875442 12222233332 111111111 2358899
Q ss_pred HhhhcCCCCCCCCC-----ccccccCCCCCC
Q 042457 333 AFACLRSKPKSRPT-----MRRSFPNPEINP 358 (361)
Q Consensus 333 i~~cl~~dP~~RPs-----~~eil~hp~~~~ 358 (361)
+.+||+.+|++||+ ++|+++||||++
T Consensus 227 i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 227 IKQLLRRNPEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred HHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence 99999999999999 999999999985
No 219
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3e-42 Score=302.60 Aligned_cols=255 Identities=29% Similarity=0.454 Sum_probs=211.1
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--CeEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KCMFLIY 166 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 166 (361)
+|...+.||+|++|.||+|... +++.|++|.+..........+.+.+|+..+++++|+||+++++.+... +..++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999775 688999999877665444567899999999999999999999999988 8899999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999997654 689999999999999999999998 9999999999999999999999999999876554
Q ss_pred CC--CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 247 SS--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 247 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
.. ......++..|+|||.+.+...+.++||||||+++|+|++|..||.... +....................
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~---- 228 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG--NPMAALYKIGSSGEPPEIPEH---- 228 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHhccccCCCcCCCcc----
Confidence 32 1334557889999999988889999999999999999999999987654 111222222211111111111
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
....+.+++.+|++.||++|||+.|+++||||
T Consensus 229 ~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 229 LSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred cCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 12358899999999999999999999999997
No 220
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.1e-42 Score=311.88 Aligned_cols=265 Identities=22% Similarity=0.307 Sum_probs=201.6
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++|++.+.||+|++|.||+|... +|+.||+|.+..........+.+..|++++++++|+||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999764 68899999987654333334678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC-CCCeEEeeecCccccCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS-KLEAFVADFGVARLLHSD 246 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~ 246 (361)
|++ ++|.+++..... ..+++..+..++.||+.||+|||+. +++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 996 578777754432 2467888899999999999999999 9999999999999985 567999999999765433
Q ss_pred CCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC------------
Q 042457 247 SSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA------------ 313 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------------ 313 (361)
........++..|+|||.+.+ ..++.++||||+|+++|+|+||+.||......+.............
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 332333456889999998765 4578899999999999999999999875432111110100000000
Q ss_pred -----CC-CCCCh--hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 314 -----PS-PIDDQ--TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 314 -----~~-~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
+. ..... ........+.+++.+|++.+|++||++.++++||||++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~ 289 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD 289 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence 00 00000 00011224788999999999999999999999999975
No 221
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-44 Score=327.18 Aligned_cols=253 Identities=25% Similarity=0.411 Sum_probs=210.4
Q ss_pred eeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCCh
Q 042457 96 CIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 174 (361)
.||+|.||+||-|+.. +...+|||.+...+... .+-+..|+.+-++++|.|||+++|.|.+++..-+.||-++||+|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~--~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSRE--VQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchh--hccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 4999999999999765 45679999987665433 46788999999999999999999999999999999999999999
Q ss_pred hhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeC-CCCCeEEeeecCccccCCCCCCcccc
Q 042457 175 FCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLN-SKLEAFVADFGVARLLHSDSSNRTVV 253 (361)
Q Consensus 175 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfg~~~~~~~~~~~~~~~ 253 (361)
.++|+..=+...-++..+-.+.+||++||.|||++ .|||||||-+|||++ -.|.+||+|||-++.+..-+......
T Consensus 660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF 736 (1226)
T KOG4279|consen 660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF 736 (1226)
T ss_pred HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCcccccc
Confidence 99998754422337888889999999999999999 999999999999995 57899999999999887766667778
Q ss_pred cccccccccccccccc--cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 254 AGTHGYIAPELAYTMV--VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 254 ~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
.||.-|||||++..++ |..++|||||||.+.||.||++||.........+...-.....++.|. +...+...
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPe------elsaeak~ 810 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPE------ELSAEAKN 810 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcH------HHHHHHHH
Confidence 8999999999998654 788999999999999999999999866553333333333333333222 22234788
Q ss_pred HHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 332 IAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 332 li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
+|++|+.+||.+||+++++|+.||++..
T Consensus 811 FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 811 FILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred HHHHHcCCCcccCccHHHhccCcccccC
Confidence 9999999999999999999999999764
No 222
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=8.6e-43 Score=317.93 Aligned_cols=258 Identities=25% Similarity=0.374 Sum_probs=200.5
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEe
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCL 157 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 157 (361)
.++.++|++.+.||+|+||.||+|... +++.||+|++....... ....+..|+.++.++ +|+||++++++|.
T Consensus 3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~-~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATAS-EYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHH-HHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 345678999999999999999999532 35789999987654332 246678899999999 8999999999887
Q ss_pred eC-CeEEEEEEeccCCChhhhhccCCc-----------------------------------------------------
Q 042457 158 HK-KCMFLIYKYMRRGSLFCVLRNDDE----------------------------------------------------- 183 (361)
Q Consensus 158 ~~-~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------- 183 (361)
.. ...++++||+++++|.+++.....
T Consensus 82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 54 568899999999999988854211
Q ss_pred -----cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC--ccccccc
Q 042457 184 -----AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGT 256 (361)
Q Consensus 184 -----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt 256 (361)
...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++|+|||++..+...... .....++
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~ 238 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 238 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCC
Confidence 12689999999999999999999999 9999999999999999999999999999876433221 1223456
Q ss_pred ccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhh
Q 042457 257 HGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFA 335 (361)
Q Consensus 257 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 335 (361)
..|+|||++.+..++.++|||||||++|||++ |..||...... ................. .....+.+++.+
T Consensus 239 ~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~ 311 (337)
T cd05054 239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID---EEFCRRLKEGTRMRAPE----YATPEIYSIMLD 311 (337)
T ss_pred ccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc---HHHHHHHhccCCCCCCc----cCCHHHHHHHHH
Confidence 78999999999999999999999999999998 99998653221 11111111111111110 112348899999
Q ss_pred hcCCCCCCCCCccccccC
Q 042457 336 CLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 336 cl~~dP~~RPs~~eil~h 353 (361)
||+.+|++|||+.|+++|
T Consensus 312 cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 312 CWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HccCChhhCcCHHHHHHH
Confidence 999999999999999875
No 223
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=9.3e-43 Score=307.24 Aligned_cols=251 Identities=26% Similarity=0.424 Sum_probs=200.1
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
..+|.+.+.||+|+||.||+|... +++.||+|.+...... ...+.+|++.++.++|+||+++++++...+..+++|
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchH---HHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 456888899999999999999764 5889999998754322 467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++..... ..+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 82 EFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EeCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 99999999999865432 2589999999999999999999999 9999999999999999999999999999766433
Q ss_pred CCCc-ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 247 SSNR-TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 247 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
.... ....++..|+|||.+.+..++.++||||||+++|||++ |..||..... .. ................
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~-~~~~~~~~~~~~~~~~---- 229 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQ-VYELLEKGYRMERPEG---- 229 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HH-HHHHHHCCCCCCCCCC----
Confidence 2211 11224568999999988899999999999999999998 9999864332 11 1111221111111111
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
....+.+++.+||+.||++|||+.++++.
T Consensus 230 ~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 230 CPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred CCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 12358899999999999999999998753
No 224
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.1e-42 Score=305.49 Aligned_cols=248 Identities=25% Similarity=0.447 Sum_probs=199.9
Q ss_pred cCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
.+|.+.+.||+|+||.||+|...++..+|+|.+...... ...+.+|+++++.++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 457788899999999999998877788999998654432 25678899999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++..... .+++..++.++.|++.|++|||+. +++|+||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 81 MANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred CCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 999999999876443 589999999999999999999999 999999999999999999999999999876533221
Q ss_pred C-cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcc-cCCCCCCChhhHHH
Q 042457 249 N-RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQ-RAPSPIDDQTVIQD 325 (361)
Q Consensus 249 ~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 325 (361)
. .....++..|+|||.+.+..++.++||||||+++||+++ |+.||...... .....+... ....+.. .
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~------~ 226 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS---EVVESVSAGYRLYRPKL------A 226 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH---HHHHHHHcCCcCCCCCC------C
Confidence 1 111223457999999988889999999999999999999 89998754331 112222211 1111111 1
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
...+.+++.+||+.+|++|||+.|+++.
T Consensus 227 ~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 227 PTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 2258899999999999999999999864
No 225
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-44 Score=323.56 Aligned_cols=255 Identities=27% Similarity=0.441 Sum_probs=215.9
Q ss_pred CHHHHHHHhcCCCCcCeeeecCceeEEEEEeCC-CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee
Q 042457 80 TFEEIIVATEDFDIKYCIGTGGYGSVYRAQLPS-GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH 158 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 158 (361)
.+++|+....++...++||-|.||.||.|.|+. ...||||.++.+..+ .++|+.|+.+|+.++|||+|+++|+|..
T Consensus 258 n~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe---veEFLkEAAvMKeikHpNLVqLLGVCT~ 334 (1157)
T KOG4278|consen 258 NADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTH 334 (1157)
T ss_pred CcchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh---HHHHHHHHHHHHhhcCccHHHHhhhhcc
Confidence 457888888889999999999999999998865 557999999876654 5899999999999999999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 159 KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
+...|||+|||..|+|.+||++.+.. .++.--.+.++.||+.||.||..+ +++||||..+|+||.++..+|++|||
T Consensus 335 EpPFYIiTEfM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFG 410 (1157)
T KOG4278|consen 335 EPPFYIITEFMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFG 410 (1157)
T ss_pred CCCeEEEEecccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccc
Confidence 99999999999999999999987644 466677889999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCccc-ccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhccc--CC
Q 042457 239 VARLLHSDSSNRTV-VAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQR--AP 314 (361)
Q Consensus 239 ~~~~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~--~~ 314 (361)
+++.+..+.+.... .--.+.|.|||.+.-+.++.|+|||+||++|||+.| |-.||...+.. ..+.+++.. +.
T Consensus 411 LsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS----qVY~LLEkgyRM~ 486 (1157)
T KOG4278|consen 411 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYGLLEKGYRMD 486 (1157)
T ss_pred hhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH----HHHHHHhcccccc
Confidence 99998766554322 223568999999999999999999999999999999 99998765432 233333332 23
Q ss_pred CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccc
Q 042457 315 SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSF 351 (361)
Q Consensus 315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 351 (361)
.+...+. .+++|++.||+++|.+||++.|+-
T Consensus 487 ~PeGCPp------kVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 487 GPEGCPP------KVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred CCCCCCH------HHHHHHHHHhcCCcccCccHHHHH
Confidence 3333332 489999999999999999999874
No 226
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.1e-42 Score=307.70 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=203.1
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCe
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKC 161 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 161 (361)
.++|.+.+.||+|+||.||+|... ++..||+|.+...... +..+.+.+|+++++.++|+||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN-DARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH-HHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 356788889999999999999763 3478999998765443 234788999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhccCCc-----------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDE-----------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL 230 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~ 230 (361)
.+++|||+++++|.+++...+. ...+++..+..++.|++.|+.|||+. +++|+||||+||+++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCC
Confidence 9999999999999999975421 23578999999999999999999999 999999999999999999
Q ss_pred CeEEeeecCccccCCCCC--CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhh
Q 042457 231 EAFVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLID 307 (361)
Q Consensus 231 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 307 (361)
.++|+|||++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||..... ......
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~---~~~~~~ 236 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN---EEVIEC 236 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHH
Confidence 999999999876533221 1222345678999999999999999999999999999999 9999864432 222222
Q ss_pred hhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 308 LLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
+........... ....+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 237 ITQGRLLQRPRT-----CPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHcCCcCCCCCC-----CCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 222222221111 1124889999999999999999999875
No 227
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-43 Score=316.08 Aligned_cols=262 Identities=24% Similarity=0.396 Sum_probs=210.8
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEE
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 163 (361)
.+....|++.++||.||.+.||++...+.+.+|+|++.....+.+.+..|..|+.+|.++ .|.+|+++++|-..++.+|
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 345567899999999999999999988888999998876666667789999999999999 5999999999999999999
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
+|||+- ..+|..+|+..... ...| .++.+..|++.++.++|++ ||||.||||.|+|+-. |.+||+|||+|..+
T Consensus 437 mvmE~G-d~DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 437 MVMECG-DIDLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAI 509 (677)
T ss_pred EEeecc-cccHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhccc
Confidence 999986 56999999876543 3345 7788999999999999999 9999999999998865 58999999999988
Q ss_pred CCCCCC--cccccccccccccccccccc-----------cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc
Q 042457 244 HSDSSN--RTVVAGTHGYIAPELAYTMV-----------VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD 310 (361)
Q Consensus 244 ~~~~~~--~~~~~gt~~y~aPE~~~~~~-----------~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 310 (361)
..+... ....+||..||+||.+.... .+.++||||+|||||+|+.|+.||..+.... ..+..+.+
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~--aKl~aI~~ 587 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQI--AKLHAITD 587 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHH--HHHHhhcC
Confidence 665433 34567999999999885433 4578999999999999999999987654211 12233333
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 311 QRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.....+...-.... ++.++++.||+.||.+|||..++|+|||++.
T Consensus 588 P~~~Iefp~~~~~~---~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 588 PNHEIEFPDIPEND---ELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred CCccccccCCCCch---HHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 32211111111111 2788999999999999999999999999986
No 228
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.4e-42 Score=305.62 Aligned_cols=251 Identities=27% Similarity=0.466 Sum_probs=201.9
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
+..++|++.++||+|+||.||+|...+++.||+|.+...... .+.+..|+.++++++|+|++++++++. .+..+++
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYII 78 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEE
Confidence 456788999999999999999999888999999998765543 257889999999999999999999874 4568999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 79 TEYMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EEcCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 999999999999875432 3689999999999999999999999 999999999999999999999999999976642
Q ss_pred CCC-CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhH
Q 042457 246 DSS-NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVI 323 (361)
Q Consensus 246 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||..... ....... ......+....
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~-~~~~~~~~~~~--- 227 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN---PEVIQNL-ERGYRMPRPDN--- 227 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHH-HcCCCCCCCCC---
Confidence 222 1222335678999999988889999999999999999999 9999875432 1111111 22211111111
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
....+.+++.+||+.+|++|||++++++
T Consensus 228 -~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 228 -CPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred -CCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 1225889999999999999999999875
No 229
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-43 Score=294.89 Aligned_cols=264 Identities=22% Similarity=0.374 Sum_probs=216.8
Q ss_pred CHHHHHHHhcCCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEe
Q 042457 80 TFEEIIVATEDFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCL 157 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 157 (361)
+++++...+++. ||+|+|+.|-.+ .+.+|..+|||++.+..... .....+|++++.+. .|+||+.++++|+
T Consensus 74 ~F~d~YkLt~e~-----LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHs--R~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 74 KFEDMYKLTSEL-----LGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHS--RSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred hHHHHHHhHHHH-----hcCccceeeeeeeeeccchhhhhhhhhcCCchH--HHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 477777777655 999999999988 56789999999998775543 46788999999998 5999999999999
Q ss_pred eCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCC---eEE
Q 042457 158 HKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLE---AFV 234 (361)
Q Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~---~kl 234 (361)
++...|||||-|.||+|..++++.. .+++.+..++..+|+.||.|||.+ ||.||||||+|||...... +||
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred ccceEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceee
Confidence 9999999999999999999998765 699999999999999999999999 9999999999999976554 799
Q ss_pred eeecCccccCCCC-------CCccccccccccccccccc-----ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCc-
Q 042457 235 ADFGVARLLHSDS-------SNRTVVAGTHGYIAPELAY-----TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNP- 301 (361)
Q Consensus 235 ~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~- 301 (361)
+||.+...+.... ......+|+..|||||+.. ...|+.+.|.||||+|+|-|++|.+||......+-
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 9999986543221 1123457889999999763 34588899999999999999999999987655332
Q ss_pred -----------chhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 302 -----------KIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 302 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
+.....+-++....|..+..... .+..+++...+..|+.+|.++.++++|||++.
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS--~eakdlisnLlvrda~~rlsa~~vlnhPw~~~ 366 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHIS--SEAKDLISNLLVRDAKQRLSAAQVLNHPWVQR 366 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccCCcCChhhhHHhh--HHHHHHHHHHHhccHHhhhhhhhccCCccccc
Confidence 22344555555555555443333 35678999999999999999999999999975
No 230
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.2e-42 Score=309.64 Aligned_cols=258 Identities=22% Similarity=0.294 Sum_probs=205.6
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|.+.+.||+|+||.||++... +++.|++|.+..... .......+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999764 578999999876542 1223467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999997654 588999999999999999999999 9999999999999999999999999988642110
Q ss_pred CC---------------CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc
Q 042457 247 SS---------------NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ 311 (361)
Q Consensus 247 ~~---------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 311 (361)
.. ......++..|+|||.+.+..++.++|+||||+++||+++|..||.... ...........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~---~~~~~~~~~~~ 231 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT---PEELFGQVISD 231 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhc
Confidence 00 0112346788999999988889999999999999999999999986432 12222333322
Q ss_pred cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCC---ccccccCCCCCC
Q 042457 312 RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPT---MRRSFPNPEINP 358 (361)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil~hp~~~~ 358 (361)
....+.... .....+.+++.+||+.||++||| +.++++||||..
T Consensus 232 ~~~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 232 DIEWPEGDE---ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred ccCCCCccc---cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence 222221111 11224789999999999999998 688999999964
No 231
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.9e-42 Score=303.72 Aligned_cols=256 Identities=21% Similarity=0.317 Sum_probs=204.2
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|++.+.||+|+||.||+|... +|+.||+|.++.... .....+.+.+|++++++++|+|++++++++...+..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999776 789999998864332 2223567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 167 KYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
||+++++|.+++.... ....+++.++..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999886532 233589999999999999999999999 999999999999999999999999999876644
Q ss_pred CCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
.........++..|+|||.+.+..++.++|+||||+++|+|++|+.||..... ..............+ +... ...
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~-~~~~---~~~ 233 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIEKCDYP-PLPA---DHY 233 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-cHHHHHhhhhcCCCC-CCCh---hhc
Confidence 33333344578899999999888899999999999999999999999854321 111111111111111 1111 112
Q ss_pred HHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
...+.+++.+||+.+|++|||+.+|++
T Consensus 234 ~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 234 SEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 235889999999999999999999875
No 232
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.2e-42 Score=308.21 Aligned_cols=253 Identities=23% Similarity=0.407 Sum_probs=199.5
Q ss_pred cCCCCcCeeeecCceeEEEEEe-----CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-----PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
.+|++.+.||+|+||.||+|.. .++..|++|.+...... .....+.+|+++++.++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNP-QQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCH-HHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 4578889999999999999974 35678999999754432 33467889999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhccCC--------------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC
Q 042457 164 LIYKYMRRGSLFCVLRNDD--------------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK 229 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~--------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~ 229 (361)
++|||+++++|.+++.... ....+++.+.+.++.|++.||+|||+. +++|+||||+|||++++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCC
Confidence 9999999999999985321 123578899999999999999999999 99999999999999999
Q ss_pred CCeEEeeecCccccCCCCC--CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHh
Q 042457 230 LEAFVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLI 306 (361)
Q Consensus 230 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 306 (361)
+.+||+|||+++....... ......++..|+|||++.+..++.++||||||+++|||++ |..||..... ... .
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~---~~~-~ 236 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN---QEV-I 236 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---HHH-H
Confidence 9999999999976543221 1222335678999999988889999999999999999998 9999864332 111 1
Q ss_pred hhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 307 DLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.........+.... ....+.+++.+||+.||.+||++.+|+++
T Consensus 237 ~~~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 237 EMVRKRQLLPCSED----CPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHHcCCcCCCCCC----CCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 22222111111111 11247889999999999999999998865
No 233
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.1e-42 Score=321.03 Aligned_cols=258 Identities=22% Similarity=0.345 Sum_probs=201.0
Q ss_pred HHHHhcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEEE
Q 042457 84 IIVATEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGFC 156 (361)
Q Consensus 84 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 156 (361)
+....++|.+.+.||+|+||.||+|... .+..||||++...... ...+.+.+|++++++++ ||||++++++|
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS-SEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh-HHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 3455778999999999999999999752 2346999999765433 22467899999999996 99999999999
Q ss_pred eeCCeEEEEEEeccCCChhhhhccCCc-----------------------------------------------------
Q 042457 157 LHKKCMFLIYKYMRRGSLFCVLRNDDE----------------------------------------------------- 183 (361)
Q Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------- 183 (361)
...+..++||||+++|+|.+++.....
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 999999999999999999988754210
Q ss_pred ----------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCC
Q 042457 184 ----------------------------------------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNN 223 (361)
Q Consensus 184 ----------------------------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~N 223 (361)
...+++..+..++.|++.||+|||+. +++|+||||+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~N 267 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARN 267 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHh
Confidence 12478888999999999999999999 99999999999
Q ss_pred eeeCCCCCeEEeeecCccccCCCCC--CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCC
Q 042457 224 ILLNSKLEAFVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFN 300 (361)
Q Consensus 224 ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~ 300 (361)
||+++++.+||+|||+++....... ......++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~- 346 (400)
T cd05105 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD- 346 (400)
T ss_pred EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh-
Confidence 9999999999999999976543222 1122346678999999988889999999999999999997 99998653221
Q ss_pred cchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 301 PKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
......+... ...+... .....+.+++.+||+.||++|||+.++.+
T Consensus 347 -~~~~~~~~~~-~~~~~~~----~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 347 -STFYNKIKSG-YRMAKPD----HATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred -HHHHHHHhcC-CCCCCCc----cCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 1111111111 1111111 11234889999999999999999998865
No 234
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.8e-42 Score=304.76 Aligned_cols=256 Identities=21% Similarity=0.320 Sum_probs=203.4
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|.+.+.||+|++|.||++.. .+|+.+|||.+..... .......+.+|+.+++.++|+||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4678888999999999999975 5789999998865432 2333467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 167 KYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
||+++++|.+++.... ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999886422 233689999999999999999999999 999999999999999999999999999876654
Q ss_pred CCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
.........++..|+|||.+.+..++.++|+||||+++|+|++|..||..... +.......+.....+ +... ...
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~-~~~~---~~~ 233 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIEQCDYP-PLPS---DHY 233 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc-hHHHHhhhhhcCCCC-CCCc---ccc
Confidence 43333344688899999999888899999999999999999999999864321 111111111111111 1110 112
Q ss_pred HHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
...+.+++.+||+.||++|||+.+|++
T Consensus 234 ~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 234 SEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred cHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 235889999999999999999998764
No 235
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3e-42 Score=306.57 Aligned_cols=249 Identities=21% Similarity=0.229 Sum_probs=191.8
Q ss_pred eeeecCceeEEEEEe-CCCCEEEEEEeccCcchHH-HHHHHHHHHHHH---hcCCCCcceeeeEEEeeCCeEEEEEEecc
Q 042457 96 CIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELA-FLESFQTEARLL---SQIRHRNIVKLYGFCLHKKCMFLIYKYMR 170 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 170 (361)
.||+|+||.||++.. .+++.+|+|.+........ ....+..|..++ ...+|+|++.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 389999999999976 4688999998865432111 112233444333 34479999999999999999999999999
Q ss_pred CCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCc
Q 042457 171 RGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR 250 (361)
Q Consensus 171 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 250 (361)
+++|.+++.... .+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....... .
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--~ 152 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--P 152 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--c
Confidence 999999887654 589999999999999999999999 99999999999999999999999999987553322 2
Q ss_pred cccccccccccccccc-ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHH
Q 042457 251 TVVAGTHGYIAPELAY-TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILV 329 (361)
Q Consensus 251 ~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 329 (361)
....|+..|+|||.+. +..++.++||||+|+++|||++|+.||......................+.. ....+
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 226 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDS------FSPEL 226 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccc------cCHHH
Confidence 2345899999999876 4567899999999999999999999997543322211111111111111111 12247
Q ss_pred HHHHhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 330 SKIAFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 330 ~~li~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
.+++.+||+.||.+|| |++|+++||||+.
T Consensus 227 ~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 227 KSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 8899999999999999 6999999999986
No 236
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.8e-42 Score=312.57 Aligned_cols=263 Identities=22% Similarity=0.329 Sum_probs=197.3
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC------
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK------ 160 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 160 (361)
-++|++.+.||+|+||.||+|... +++.||+|.+............+.+|+.++++++||||++++++|...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 346889999999999999999764 6889999998654433222345668999999999999999999987654
Q ss_pred --eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 161 --CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 161 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
..++||||+.+ +|.+.+..... .+++.+++.++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKNV--KFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCC
Confidence 45999999964 78777765432 589999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCC----ccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC
Q 042457 239 VARLLHSDSSN----RTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA 313 (361)
Q Consensus 239 ~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 313 (361)
++......... .....++..|+|||.+.+. .++.++||||||+++|||++|+.||....................
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99766432221 1223467889999987664 368899999999999999999999865432111111111111000
Q ss_pred C----------------CCCCChhhH-------HHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 314 P----------------SPIDDQTVI-------QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 314 ~----------------~~~~~~~~~-------~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
+ .+....... .....+.+++.+||+.||.+|||++|+++||||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 0 000000000 001246789999999999999999999999998
No 237
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=8.1e-42 Score=299.73 Aligned_cols=256 Identities=26% Similarity=0.408 Sum_probs=211.5
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|.+.+.||.|+||.||++... +++.+++|++............+..|++.++.++|+|++++.+.+...+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778889999999999999764 688999999987655444567788999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 169 MRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 169 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
+++++|.+++.... ....+++..+..++.+++.||.|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999987642 123689999999999999999999999 99999999999999999999999999998765544
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
.......+++.|+|||...+..++.++|+||+|+++|+|++|+.||..... ................. ....
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~ 229 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL---LELALKILKGQYPPIPS-----QYSS 229 (258)
T ss_pred ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH---HHHHHHHhcCCCCCCCC-----CCCH
Confidence 333445688899999998888899999999999999999999999865432 22222222222211111 1112
Q ss_pred HHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.+.+++.+||+.+|++|||+.++++||||
T Consensus 230 ~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 230 ELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 47889999999999999999999999997
No 238
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-43 Score=311.08 Aligned_cols=255 Identities=22% Similarity=0.335 Sum_probs=217.7
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
.-|.+.+.||+|.|..|-++++ -+|..||||++.....+......+.+|++.|+.++|||||++|.+......+|||+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 3477888899999999999943 489999999998877666556788899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeC-CCCCeEEeeecCccccCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLN-SKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfg~~~~~~~~ 246 (361)
.-.+|+|++|+-+... .+++....+++.||..|+.|+|+. .+|||||||+||.+. .-|-+||.|||++..+...
T Consensus 98 LGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred ecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 9999999999977654 488889999999999999999999 999999999999775 4588999999999766433
Q ss_pred CCCcccccccccccccccccccccC-ccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVT-EKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
......+|+..|.|||++.+..|+ ++.||||||+|||.|++|+.||....+ ...+..+++-....|....
T Consensus 173 -~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND---SETLTmImDCKYtvPshvS----- 243 (864)
T KOG4717|consen 173 -KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND---SETLTMIMDCKYTVPSHVS----- 243 (864)
T ss_pred -chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc---hhhhhhhhcccccCchhhh-----
Confidence 334556799999999999998876 689999999999999999999886544 3344555555555443322
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.+..+||..||..||.+|-|.++|..++|++.
T Consensus 244 -~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 244 -KECRDLIQSMLVRDPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred -HHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence 24889999999999999999999999999986
No 239
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=7e-42 Score=299.66 Aligned_cols=253 Identities=27% Similarity=0.440 Sum_probs=210.5
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|++.+.||+|++|.||++... +++.|++|.+..........+.+.+|++++++++|+|++++++++...+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999654 678999999987765445567899999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++.... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 99999999987653 689999999999999999999999 999999999999999999999999999987755444
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIIL 328 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (361)
......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ............+.... .....
T Consensus 155 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~ 226 (254)
T cd06627 155 DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP---MAALFRIVQDDHPPLPE-----GISPE 226 (254)
T ss_pred cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHhccCCCCCCC-----CCCHH
Confidence 33445678899999998887789999999999999999999999875432 11122222121111111 01224
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
+.+++.+||+.+|++|||+.+++.||||
T Consensus 227 ~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 227 LKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 7899999999999999999999999997
No 240
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.8e-42 Score=302.30 Aligned_cols=241 Identities=23% Similarity=0.354 Sum_probs=193.1
Q ss_pred eeeecCceeEEEEEe---CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCC
Q 042457 96 CIGTGGYGSVYRAQL---PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
.||+|+||.||+|.+ .++..+|+|+++.........+.+..|+.+++.++|+||+++++++.. +..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 589999999999964 357889999987665555556789999999999999999999998864 4678999999999
Q ss_pred ChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC---
Q 042457 173 SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--- 249 (361)
Q Consensus 173 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--- 249 (361)
+|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 81 PLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence 9999997544 588999999999999999999999 9999999999999999999999999999866443221
Q ss_pred cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhccc-CCCCCCChhhHHHHH
Q 042457 250 RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQR-APSPIDDQTVIQDII 327 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 327 (361)
.....++..|+|||.+.+..++.++|+||||+++|||++ |+.||...... .....+..+. .+.+... ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~i~~~~~~~~~~~~------~~ 225 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EVTQMIESGERMECPQRC------PP 225 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHCCCCCCCCCCC------CH
Confidence 111223578999999888888999999999999999998 99998754321 1122222211 1112111 12
Q ss_pred HHHHHHhhhcCCCCCCCCCcccccc
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.+.+++.+||+.||++|||+.+|.+
T Consensus 226 ~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 226 EMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHHHHHHHHhccCchhCcCHHHHHH
Confidence 4789999999999999999999864
No 241
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=4.2e-42 Score=305.42 Aligned_cols=251 Identities=25% Similarity=0.301 Sum_probs=199.3
Q ss_pred eeecCceeEEEEEeC-CCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCCh
Q 042457 97 IGTGGYGSVYRAQLP-SGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 97 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 174 (361)
||+|+||+||++... +|+.+|+|.+...... ......+..|+++++.++|||++++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999654 6889999998654321 22235667899999999999999999999999999999999999999
Q ss_pred hhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCccccc
Q 042457 175 FCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254 (361)
Q Consensus 175 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 254 (361)
.+++..... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...... .......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRA 155 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC-Ccccccc
Confidence 999876543 2589999999999999999999999 9999999999999999999999999998765432 2223345
Q ss_pred ccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHh-hhhcccCCCCCCChhhHHHHHHHHHHH
Q 042457 255 GTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLI-DLLDQRAPSPIDDQTVIQDIILVSKIA 333 (361)
Q Consensus 255 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li 333 (361)
++..|+|||.+.+..++.++||||||+++|+|++|+.||............. .........+... ...+.+++
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~li 229 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKF------SPEAKDLC 229 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccC------CHHHHHHH
Confidence 7789999999988889999999999999999999999987544311111111 1111111111111 22478999
Q ss_pred hhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 334 FACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 334 ~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
.+||+.||.+|| ++.++++||||++
T Consensus 230 ~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 230 EALLQKDPEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred HHHccCChhHccCCCcccHHHHHhChhhhc
Confidence 999999999999 7777999999965
No 242
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.6e-42 Score=303.85 Aligned_cols=251 Identities=27% Similarity=0.466 Sum_probs=200.2
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
+..++|++.+.||+|+||.||+|...++..+|+|.+....... +.+.+|+.++++++|+|++++++++. .+..+++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~---~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv 78 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSP---ESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIV 78 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCH---HHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEE
Confidence 3456788899999999999999998888899999987654432 56889999999999999999999885 4568999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+++++|.+++..... ..+++.++..++.+++.||+|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 79 TEYMSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIED 154 (260)
T ss_pred EEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence 999999999999875432 2589999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCC-cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhH
Q 042457 246 DSSN-RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVI 323 (361)
Q Consensus 246 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
.... .....++..|+|||.+.+..++.++|+||||+++|||++ |..||..... ......+... ...+...
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~-~~~~~~~---- 226 (260)
T cd05070 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---REVLEQVERG-YRMPCPQ---- 226 (260)
T ss_pred cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcC-CCCCCCC----
Confidence 3221 112234567999999888889999999999999999999 8999865432 1222222222 1111111
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.....+.+++.+||+++|++|||+.++.+
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 227 DCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 11235889999999999999999998863
No 243
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.4e-42 Score=315.72 Aligned_cols=262 Identities=23% Similarity=0.297 Sum_probs=201.4
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC------
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK------ 159 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 159 (361)
..++|+..+.||+|+||.||++.. .+|+.||+|.+............+.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999965 4789999999875433333346677899999999999999999988644
Q ss_pred CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecC
Q 042457 160 KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGV 239 (361)
Q Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~ 239 (361)
...++||||+. ++|.+.+.. .++...+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 35799999996 478777653 278889999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchh---------------
Q 042457 240 ARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIM--------------- 304 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~--------------- 304 (361)
+........ .....++..|+|||.+.+..++.++||||||+++|+|++|+.||...........
T Consensus 165 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
T cd07850 165 ARTAGTSFM-MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR 243 (353)
T ss_pred ceeCCCCCC-CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 976543222 2234578899999999999999999999999999999999999864332100000
Q ss_pred ----HhhhhcccCCC--------------CC-CChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 305 ----LIDLLDQRAPS--------------PI-DDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 305 ----~~~~~~~~~~~--------------~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
........... +. ...........+.+++.+||+.||++|||+.|+|+||||+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 00000000000 00 00000012334789999999999999999999999999864
No 244
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7.3e-42 Score=300.09 Aligned_cols=251 Identities=22% Similarity=0.349 Sum_probs=203.7
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|++.+.||+|+||.||++... +++.+|+|.+...... ...+.+..|+.+++.++|+|++++++.+...+..+++|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS-SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch-HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 4778899999999999999654 6889999998654332 2346788899999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++..... ..++...++.++.|++.||.|||+. +++|+||||+||++++++.++++|||.+........
T Consensus 80 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 80 CDGGDLMQKIKLQRG-KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 999999998865322 2578899999999999999999999 999999999999999999999999999976654433
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIIL 328 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (361)
......++..|+|||++.+..++.++|+||||+++|+|++|+.||..... ......+.......... .....
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~ 227 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW---KNLILKVCQGSYKPLPS-----HYSYE 227 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH---HHHHHHHhcCCCCCCCc-----ccCHH
Confidence 33445688899999999888899999999999999999999999874332 12222222222221111 11124
Q ss_pred HHHHHhhhcCCCCCCCCCccccccC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
+.+++.+||+.||++|||+.++++-
T Consensus 228 ~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 228 LRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHHhCCcccCCCHHHHhhc
Confidence 7889999999999999999999864
No 245
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.4e-42 Score=308.13 Aligned_cols=250 Identities=22% Similarity=0.378 Sum_probs=201.5
Q ss_pred CeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCC
Q 042457 95 YCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGS 173 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 173 (361)
..||+|+||.||++.. .+|+.||+|++...... ....+..|+.+++.++|+|++++++++...+..+++|||+++++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchh--HHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 4599999999999976 47899999998654332 24678899999999999999999999999999999999999999
Q ss_pred hhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcccc
Q 042457 174 LFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253 (361)
Q Consensus 174 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 253 (361)
|.+++... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++.............
T Consensus 104 L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~ 176 (292)
T cd06657 104 LTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 176 (292)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccccccc
Confidence 99987543 478999999999999999999999 99999999999999999999999999987664433333445
Q ss_pred cccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHH
Q 042457 254 AGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIA 333 (361)
Q Consensus 254 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 333 (361)
.++..|+|||.+.+..++.++|+||+|+++|+|++|..||...... .... ......+...... ......+.+++
T Consensus 177 ~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~---~~~~-~~~~~~~~~~~~~--~~~~~~l~~li 250 (292)
T cd06657 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMK-MIRDNLPPKLKNL--HKVSPSLKGFL 250 (292)
T ss_pred ccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH-HHHhhCCcccCCc--ccCCHHHHHHH
Confidence 6888999999988888899999999999999999999998643221 1111 1111111111000 01112477889
Q ss_pred hhhcCCCCCCCCCccccccCCCCCCC
Q 042457 334 FACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 334 ~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.+||+.||.+||++.++++||||.+.
T Consensus 251 ~~~l~~~P~~R~~~~~ll~~~~~~~~ 276 (292)
T cd06657 251 DRLLVRDPAQRATAAELLKHPFLAKA 276 (292)
T ss_pred HHHHhCCcccCcCHHHHhcChHHhcc
Confidence 99999999999999999999999763
No 246
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.6e-42 Score=300.80 Aligned_cols=243 Identities=25% Similarity=0.413 Sum_probs=192.7
Q ss_pred eeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCCh
Q 042457 96 CIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 174 (361)
.||+|+||.||+|... +++.+|+|....... ......+.+|++++++++|+||+++++++...+..++||||+++++|
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 5899999999999764 788999998765432 23346788999999999999999999999999999999999999999
Q ss_pred hhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCc--cc
Q 042457 175 FCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR--TV 252 (361)
Q Consensus 175 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~--~~ 252 (361)
.+++..... .+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++.......... ..
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 155 (252)
T cd05084 81 LTFLRTEGP--RLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155 (252)
T ss_pred HHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence 999875432 588999999999999999999999 99999999999999999999999999987543221111 11
Q ss_pred ccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 253 VAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 253 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...+..|+|||.+.+..++.++||||||+++|||++ |..||....... . ..........+... .....+.+
T Consensus 156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~---~-~~~~~~~~~~~~~~----~~~~~~~~ 227 (252)
T cd05084 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ---T-REAIEQGVRLPCPE----LCPDAVYR 227 (252)
T ss_pred CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH---H-HHHHHcCCCCCCcc----cCCHHHHH
Confidence 123457999999988889999999999999999998 888886543211 1 11111111111111 11225888
Q ss_pred HHhhhcCCCCCCCCCcccccc
Q 042457 332 IAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 332 li~~cl~~dP~~RPs~~eil~ 352 (361)
++.+||+.+|++|||+.++++
T Consensus 228 li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 228 LMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999875
No 247
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-43 Score=330.40 Aligned_cols=254 Identities=22% Similarity=0.352 Sum_probs=207.0
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEeCCC-CEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEE-EeeC--
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQLPSG-KIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGF-CLHK-- 159 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~-~~~~-- 159 (361)
.+...++.+.+.|.+|||+.||.+....+ ..+|+|++...+. ..++...+|+++|+.|. |+|||.+++. ....
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de--~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDE--EALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCH--HHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 45667788899999999999999987666 9999999887643 34788999999999996 9999999993 3221
Q ss_pred ----CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEe
Q 042457 160 ----KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVA 235 (361)
Q Consensus 160 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~ 235 (361)
-+++|+||||+||.|-+++...... .|++.++++|+.|+++|+++||.. .|+|+|||||.+||||+.+++.|||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLC 188 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLC 188 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeC
Confidence 2588999999999999999864433 499999999999999999999976 5579999999999999999999999
Q ss_pred eecCccccCCCCCCcc---------cccccccccccccc---cccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcch
Q 042457 236 DFGVARLLHSDSSNRT---------VVAGTHGYIAPELA---YTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKI 303 (361)
Q Consensus 236 Dfg~~~~~~~~~~~~~---------~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 303 (361)
|||.+........... ...-|+.|.|||++ .+..+++|+|||+|||+||-|+....||+....
T Consensus 189 DFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----- 263 (738)
T KOG1989|consen 189 DFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----- 263 (738)
T ss_pred cccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-----
Confidence 9999876543331111 12368899999976 477899999999999999999999999986543
Q ss_pred hHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 304 MLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
..++......|.... ....+.+||..||+.||++||++-|++.+
T Consensus 264 --laIlng~Y~~P~~p~----ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 264 --LAILNGNYSFPPFPN----YSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred --eeEEeccccCCCCcc----HHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 345556555554322 22358999999999999999999999854
No 248
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.2e-42 Score=306.19 Aligned_cols=254 Identities=26% Similarity=0.372 Sum_probs=199.5
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeCC------CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLPS------GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK 160 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 160 (361)
.+++|.+.+.||+|++|.||+|...+ +..|++|......... ....+..|+.+++.++|+||+++++++.+.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ-DESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 45678999999999999999997643 5679999886544322 2367889999999999999999999999999
Q ss_pred eEEEEEEeccCCChhhhhccCCc----cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC---CeE
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDE----AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL---EAF 233 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~---~~k 233 (361)
..+++|||+++++|.+++..... ...+++..+.+++.||+.|++|||+. +++|+||||+||+++.++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceE
Confidence 99999999999999999876432 12589999999999999999999999 999999999999998654 589
Q ss_pred EeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhc
Q 042457 234 VADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLD 310 (361)
Q Consensus 234 l~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 310 (361)
|+|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~---~~~~~~~~ 236 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ---EVMEFVTG 236 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHHc
Confidence 9999999866322211 111223467999999988889999999999999999997 99998754321 11111111
Q ss_pred c-cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 311 Q-RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 311 ~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
. ....+... ...+.+++.+||+.+|++|||+.++++|
T Consensus 237 ~~~~~~~~~~------~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 237 GGRLDPPKGC------PGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred CCcCCCCCCC------CHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1 11111111 1247889999999999999999999986
No 249
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-43 Score=316.60 Aligned_cols=253 Identities=27% Similarity=0.395 Sum_probs=208.9
Q ss_pred HHHHhcCCCCcCeeeecCceeEEEEEeCC---C--CEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee
Q 042457 84 IIVATEDFDIKYCIGTGGYGSVYRAQLPS---G--KIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH 158 (361)
Q Consensus 84 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~---~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 158 (361)
+++..+.....++||.|.||.||+|.+.+ | -.||||..+.+..... .+.|+.|..+|++++||||++++|+|.+
T Consensus 384 yel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~-tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 384 YELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD-TEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred ceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhh-HHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 34445556667789999999999996633 3 3589999987665443 6899999999999999999999999987
Q ss_pred CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 159 KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
.. .|+|||.++-|-|..+|+.+.. .++......++.||+.+|+|||+. .+|||||..+||||.....+||+|||
T Consensus 463 ~P-~WivmEL~~~GELr~yLq~nk~--sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFG 536 (974)
T KOG4257|consen 463 QP-MWIVMELAPLGELREYLQQNKD--SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFG 536 (974)
T ss_pred cc-eeEEEecccchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccc
Confidence 65 7999999999999999987765 588889999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCc-ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCC
Q 042457 239 VARLLHSDSSNR-TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSP 316 (361)
Q Consensus 239 ~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 316 (361)
+++.+..+.... ....-...|||||.+.-..++.++|||.||+.|||+++ |..||......+.-..+. ...++|.|
T Consensus 537 LSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE--nGeRlP~P 614 (974)
T KOG4257|consen 537 LSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE--NGERLPCP 614 (974)
T ss_pred hhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec--CCCCCCCC
Confidence 999887655432 22234668999999999999999999999999999998 999998766544322221 23455555
Q ss_pred CCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccc
Q 042457 317 IDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSF 351 (361)
Q Consensus 317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 351 (361)
...+.. +..|+.+||++||.+||++.|+.
T Consensus 615 ~nCPp~------LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 615 PNCPPA------LYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred CCCChH------HHHHHHHHhccCcccCCcHHHHH
Confidence 554443 77889999999999999999875
No 250
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.1e-42 Score=303.41 Aligned_cols=251 Identities=25% Similarity=0.390 Sum_probs=195.5
Q ss_pred CCCcCeeeecCceeEEEEEeCCC-C--EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC------Ce
Q 042457 91 FDIKYCIGTGGYGSVYRAQLPSG-K--IVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK------KC 161 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~~~-~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~ 161 (361)
|.+.+.||+|+||.||+|.+.++ . .+|+|.++.........+.+..|+..++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 35677899999999999987543 2 589999876644444467889999999999999999999988542 24
Q ss_pred EEEEEEeccCCChhhhhccCC---ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 162 MFLIYKYMRRGSLFCVLRNDD---EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
.++++||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +++|+||||+|||+++++.++|+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999998874321 223589999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccC-C
Q 042457 239 VARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRA-P 314 (361)
Q Consensus 239 ~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~-~ 314 (361)
+++........ .....++..|+|||...+..++.++||||||+++|||++ |+.||..... ......+..... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~~~~~~~~~ 234 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN---SEIYDYLRQGNRLK 234 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHcCCCCC
Confidence 99876433221 122235678999999998889999999999999999999 8889865332 111222222211 1
Q ss_pred CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 315 SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.+.. ....+.+++.+||+.||++|||+.+++++
T Consensus 235 ~~~~------~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 235 QPPD------CLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred CCCC------CCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1111 11247899999999999999999999864
No 251
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=7.9e-42 Score=305.35 Aligned_cols=252 Identities=25% Similarity=0.440 Sum_probs=200.5
Q ss_pred hcCCCCcCeeeecCceeEEEEEe------CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCe
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL------PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKC 161 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 161 (361)
..+|.+.+.||+|+||.||++.. .++..+|+|.+...... ....+..|++++++++|+||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDN--ARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHH--HHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 45788899999999999999964 23456899988755432 34678899999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhccCC----------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCC
Q 042457 162 MFLIYKYMRRGSLFCVLRNDD----------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLE 231 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~ 231 (361)
.+++|||+++++|.+++.... ....+++..++.++.|++.||+|||+. +++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999999986432 123489999999999999999999999 9999999999999999999
Q ss_pred eEEeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhh
Q 042457 232 AFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDL 308 (361)
Q Consensus 232 ~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 308 (361)
++|+|||++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||..... ......+
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~---~~~~~~i 235 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEVIECI 235 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHH
Confidence 999999999765432211 122235678999999988889999999999999999998 8999864432 2222233
Q ss_pred hcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 309 LDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
........... ....+.+++.+||+.||.+|||++++++
T Consensus 236 ~~~~~~~~~~~-----~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 236 TQGRVLQRPRT-----CPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred HcCCcCCCCCC-----CCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 33222211111 1124889999999999999999999854
No 252
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.1e-41 Score=308.43 Aligned_cols=263 Identities=23% Similarity=0.344 Sum_probs=198.0
Q ss_pred CCCCcCeeeecCceeEEEEEeC---CCCEEEEEEeccCc-chHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--CeEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP---SGKIVALKKLHHSE-TELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KCMF 163 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 163 (361)
+|++.+.||+|+||.||+|... +++.||+|.+.... ......+.+.+|+.+++.++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778889999999999999764 47899999987643 1112235677899999999999999999999988 7899
Q ss_pred EEEEeccCCChhhhhccCC--ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC----CCCeEEeee
Q 042457 164 LIYKYMRRGSLFCVLRNDD--EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS----KLEAFVADF 237 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~----~~~~kl~Df 237 (361)
+||||+++ +|.+++.... ....++...+..++.|++.||+|||+. +++|+||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 6666654322 122588999999999999999999999 9999999999999999 899999999
Q ss_pred cCccccCCCCC---Ccccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCc------chhHhh
Q 042457 238 GVARLLHSDSS---NRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNP------KIMLID 307 (361)
Q Consensus 238 g~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~------~~~~~~ 307 (361)
|++........ ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||........ ......
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99886543322 1223457888999998765 4578899999999999999999999875433210 000000
Q ss_pred hh--------------------------cccCCCCCCChhhH-----HHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 308 LL--------------------------DQRAPSPIDDQTVI-----QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 308 ~~--------------------------~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
+. ......+....... .....+.+++.+||+.||++|||+.|+++||||
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 00 00000000000000 112347899999999999999999999999998
No 253
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=9.2e-42 Score=307.69 Aligned_cols=255 Identities=25% Similarity=0.375 Sum_probs=201.8
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
.+.|+..+.||+|+||.||+|... +|+.||+|.+..... .......+.+|+++++.++|||++++.++|...+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 456888899999999999999764 689999999864432 233346788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
+||+. |++.+++..... .+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 94 ~e~~~-g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 94 MEYCL-GSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HHhhC-CCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 99997 567666653322 589999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCCccccccccccccccccc---ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhh
Q 042457 246 DSSNRTVVAGTHGYIAPELAY---TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTV 322 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (361)
. ....++..|+|||.+. ...++.++||||||+++|||+||+.||...... .....+.....+....
T Consensus 168 ~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~---- 236 (307)
T cd06607 168 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYHIAQNDSPTLSS---- 236 (307)
T ss_pred C----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH---HHHHHHhcCCCCCCCc----
Confidence 2 2235778899999874 456788999999999999999999998643321 1111121111111111
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 323 IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 323 ~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
......+.+++.+||+.||++|||+.+++.||||.+.
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 237 NDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred hhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 1112358899999999999999999999999999753
No 254
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7.3e-42 Score=302.95 Aligned_cols=251 Identities=25% Similarity=0.413 Sum_probs=198.5
Q ss_pred CCCcCeeeecCceeEEEEEeCC----CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCe-----
Q 042457 91 FDIKYCIGTGGYGSVYRAQLPS----GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKC----- 161 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 161 (361)
|.+.+.||+|+||.||+|.... +..||+|.++...........+..|+..++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678889999999999997642 3679999998665544456789999999999999999999999876554
Q ss_pred -EEEEEEeccCCChhhhhccCC---ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeee
Q 042457 162 -MFLIYKYMRRGSLFCVLRNDD---EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADF 237 (361)
Q Consensus 162 -~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 237 (361)
.++++||+++++|..++.... ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 799999999999998885432 223689999999999999999999999 9999999999999999999999999
Q ss_pred cCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCC
Q 042457 238 GVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAP 314 (361)
Q Consensus 238 g~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 314 (361)
|+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||..... .............
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---~~~~~~~~~~~~~ 234 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---HEIYDYLRHGNRL 234 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCCCC
Confidence 999866433221 112234668999999988889999999999999999999 8899865432 1122222222111
Q ss_pred -CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 315 -SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 315 -~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.+.. ....+.+++.+||+.||.+|||+.|++++
T Consensus 235 ~~~~~------~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 235 KQPED------CLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CCCcC------CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1111 12258899999999999999999998764
No 255
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.7e-41 Score=296.60 Aligned_cols=252 Identities=30% Similarity=0.483 Sum_probs=206.6
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|...+.||+|++|.||++... +++.+++|++..... .....+.+|++.++.++|+|++++++++...+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 4677889999999999999775 688999999976654 2357888999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++.... ..+++..+..++.|++.++.+||.. +++|+||+|+||++++++.++|+|||.+........
T Consensus 79 ~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 79 CSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred CCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 99999999987653 2589999999999999999999998 999999999999999999999999999877654332
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIIL 328 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (361)
.....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...... ...........+.... . ......
T Consensus 154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~-~--~~~~~~ 226 (253)
T cd05122 154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM---KALFKIATNGPPGLRN-P--EKWSDE 226 (253)
T ss_pred -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHHhcCCCCcCc-c--cccCHH
Confidence 33446788999999998888899999999999999999999998754321 1111111111111111 1 101234
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPE 355 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~ 355 (361)
+.+++.+||+.||++|||+.|+++|||
T Consensus 227 ~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 227 FKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 889999999999999999999999998
No 256
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.7e-42 Score=308.35 Aligned_cols=261 Identities=23% Similarity=0.299 Sum_probs=198.3
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 167 (361)
+|...+.||+|+||.||++... +|+.+|+|.+...... .....+..|+..+.++. |+||+++++++...+..+++||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 4555677999999999999654 6899999998765433 23467889999999996 9999999999999999999999
Q ss_pred eccCCChhhhhcc--CCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 168 YMRRGSLFCVLRN--DDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 168 ~~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|+.. ++.++... ......+++..+..++.+++.||+|||+.. +++||||||+||+++.++.++|+|||++.....
T Consensus 84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 9864 55443321 111236899999999999999999999742 899999999999999999999999999876543
Q ss_pred CCCCccccccccccccccccccc---ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhh
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTM---VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTV 322 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (361)
... .....++..|+|||.+.+. .++.++||||||+++|||++|+.||..... .............+.. .....
T Consensus 161 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~-~~~~~ 236 (288)
T cd06616 161 SIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPIL-SNSEE 236 (288)
T ss_pred CCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCcC-CCcCC
Confidence 222 2223578899999998765 688999999999999999999999875431 1111122222211111 11111
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 323 IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 323 ~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
......+.+|+.+||+.||++|||++++++||||++
T Consensus 237 ~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 237 REFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred CccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 112235889999999999999999999999999975
No 257
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.9e-42 Score=308.92 Aligned_cols=257 Identities=24% Similarity=0.401 Sum_probs=202.9
Q ss_pred HHHHhcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEE
Q 042457 84 IIVATEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFC 156 (361)
Q Consensus 84 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 156 (361)
+.+..++|++.+.||+|+||.||++... +...+|+|.+....... ....+.+|+.+++++ +|+||+++++++
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHH-HHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3455677889999999999999999753 23679999987654332 346688999999999 799999999999
Q ss_pred eeCCeEEEEEEeccCCChhhhhccC-------------CccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCC
Q 042457 157 LHKKCMFLIYKYMRRGSLFCVLRND-------------DEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNN 223 (361)
Q Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~N 223 (361)
...+..+++|||+++|+|.++++.. .....+++..++.++.|++.||+|||+. +++|+||||+|
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~N 162 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARN 162 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccceee
Confidence 9999999999999999999998642 1233689999999999999999999999 99999999999
Q ss_pred eeeCCCCCeEEeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCC
Q 042457 224 ILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFN 300 (361)
Q Consensus 224 ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~ 300 (361)
|++++++.+||+|||+++........ .....++..|+|||.+.+..++.++||||||+++||+++ |..||.....
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-- 240 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-- 240 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH--
Confidence 99999999999999999866433221 111234567999999888889999999999999999998 9999764332
Q ss_pred cchhHhhhhcccC-CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 301 PKIMLIDLLDQRA-PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 301 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
............ ..+.. ....+.+++.+||+.||++|||+.|++++
T Consensus 241 -~~~~~~~~~~~~~~~~~~------~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 241 -EELFKLLKEGYRMEKPQN------CTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred -HHHHHHHHcCCcCCCCCC------CCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 111111111111 11111 12248899999999999999999999864
No 258
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=5.8e-42 Score=310.01 Aligned_cols=257 Identities=18% Similarity=0.241 Sum_probs=196.4
Q ss_pred cCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCC
Q 042457 94 KYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGS 173 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 173 (361)
.+.+|.|+++.||++.. +++.||+|++..........+.+..|+..++.++|+||+++++++...+..+++|||+++++
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 33455556666666655 79999999997664444456789999999999999999999999999999999999999999
Q ss_pred hhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC-----
Q 042457 174 LFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS----- 248 (361)
Q Consensus 174 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~----- 248 (361)
|.+++..... ..+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||.+........
T Consensus 86 l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 86 CEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred HHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 9999976432 2578899999999999999999999 999999999999999999999999998865532211
Q ss_pred --Ccccccccccccccccccc--cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC-----------
Q 042457 249 --NRTVVAGTHGYIAPELAYT--MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA----------- 313 (361)
Q Consensus 249 --~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----------- 313 (361)
......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||....... ..... .....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEK-VRGTVPCLLDKSTYPL 238 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH-HhccCccccccCchhh
Confidence 1122346778999998865 357889999999999999999999987543211 00000 00000
Q ss_pred -----------------CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 314 -----------------PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 314 -----------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
...............+.+++.+||+.||++|||++|+++||||++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~ 300 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQ 300 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence 000000001111234788999999999999999999999999975
No 259
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-43 Score=327.69 Aligned_cols=246 Identities=26% Similarity=0.408 Sum_probs=201.9
Q ss_pred CCCcCeeeecCceeEEEEEe-CCCC----EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 91 FDIKYCIGTGGYGSVYRAQL-PSGK----IVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
....++||+|+||+||+|.| +.|+ +||+|++.......+ ..++++|+..|.+++|||+++++|+|.... +.||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~-s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKA-SIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchh-hHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 44567899999999999954 4443 689999876554332 478999999999999999999999999877 8899
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
++|++.|+|.++++..+. .+.....+.|..|||+||.|||.+ +++||||.++||||..-..+||.|||+++.+..
T Consensus 776 tq~mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHhcccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 999999999999998665 578889999999999999999999 999999999999999999999999999998876
Q ss_pred CCCCccccc--ccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhh
Q 042457 246 DSSNRTVVA--GTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTV 322 (361)
Q Consensus 246 ~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (361)
+........ -.+.|||-|.+....++.++|||||||.+||++| |..|++.....+....+. ...+++.|.....
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle--~geRLsqPpiCti- 927 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLE--KGERLSQPPICTI- 927 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHh--ccccCCCCCCccH-
Confidence 654433332 3568999999999999999999999999999999 999988765433222211 1122444433332
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCccccc
Q 042457 323 IQDIILVSKIAFACLRSKPKSRPTMRRSF 351 (361)
Q Consensus 323 ~~~~~~l~~li~~cl~~dP~~RPs~~eil 351 (361)
.+.-++.+||..|+..||+++++.
T Consensus 928 -----DVy~~mvkCwmid~~~rp~fkel~ 951 (1177)
T KOG1025|consen 928 -----DVYMVMVKCWMIDADSRPTFKELA 951 (1177)
T ss_pred -----HHHHHHHHHhccCcccCccHHHHH
Confidence 377888899999999999999875
No 260
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8e-42 Score=301.09 Aligned_cols=249 Identities=26% Similarity=0.386 Sum_probs=203.7
Q ss_pred eeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCCh
Q 042457 97 IGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 97 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 174 (361)
||.|+||.||++... +|+.+++|.+..... .....+.+..|++++++++|+||+++++.+...+..++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999876 489999999865433 223456788999999999999999999999999999999999999999
Q ss_pred hhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC------
Q 042457 175 FCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS------ 248 (361)
Q Consensus 175 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~------ 248 (361)
.+++.+.. .+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99997654 589999999999999999999999 999999999999999999999999999876543321
Q ss_pred --CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 249 --NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 249 --~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
......++..|+|||...+...+.++||||||+++|++++|+.||..... ..............+.... ..
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~----~~ 227 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP---EEIFQNILNGKIEWPEDVE----VS 227 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCcCCCcccc----CC
Confidence 22334578899999998888889999999999999999999999865432 2222223222222222110 12
Q ss_pred HHHHHHHhhhcCCCCCCCCCc---cccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTM---RRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~---~eil~hp~~~~ 358 (361)
..+.+++.+||+.+|.+|||+ .++++||||++
T Consensus 228 ~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 228 DEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred HHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 357899999999999999999 99999999985
No 261
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=5e-42 Score=305.59 Aligned_cols=260 Identities=25% Similarity=0.350 Sum_probs=203.7
Q ss_pred CCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEec
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
|.+.+.||+|++|.||++... +|+.+++|.+............+..|+..+++++|+||+++++++...+..++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 566788999999999999764 6889999998766544334567888999999999999999999999999999999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 249 (361)
++ +|.+++.... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc
Confidence 75 8887776643 2689999999999999999999999 9999999999999999999999999999776544322
Q ss_pred ccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc----------------
Q 042457 250 RTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR---------------- 312 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---------------- 312 (361)
.....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+..+............
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 2234577889999988776 78999999999999999999999986544321111110000000
Q ss_pred --CCC--CCC-ChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 313 --APS--PID-DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 313 --~~~--~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.+. ... ..........+.+++.+||++||.+||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 000 000 00011123458899999999999999999999999997
No 262
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.1e-41 Score=302.91 Aligned_cols=249 Identities=24% Similarity=0.349 Sum_probs=194.3
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCC----EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGK----IVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
++|++.+.||+|+||.||+|.+. +|+ .+++|.+..... .....++..|+..+++++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-RQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc-hHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccE
Confidence 46788899999999999999763 344 478888754332 2234677788889999999999999998864 4578
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
+++||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||+++..
T Consensus 85 ~i~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHRD--SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEEeCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 89999999999999975432 589999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCC--CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCCh
Q 042457 244 HSDSS--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQ 320 (361)
Q Consensus 244 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (361)
..... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||...... ...+........+....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~ 235 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH----EVPDLLEKGERLAQPQI 235 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHCCCcCCCCCC
Confidence 43221 1223346778999999988889999999999999999998 99998654321 11222222111111111
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
....+.+++.+||+.||++|||+.|+++
T Consensus 236 ----~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 236 ----CTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred ----CCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 1124678899999999999999999875
No 263
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.7e-42 Score=302.58 Aligned_cols=250 Identities=27% Similarity=0.435 Sum_probs=199.1
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
..++|.+.++||+|+||.||+|...++..||+|.+...... .+.+..|+++++.++|+||+++++++.. +..++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence 45679999999999999999998877778999999754432 2568899999999999999999998754 5579999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 80 EYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EcCCCCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 99999999999975432 2578999999999999999999999 9999999999999999999999999999766433
Q ss_pred CCC-cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 247 SSN-RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 247 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
... .....++..|+|||...+..++.++||||||+++|||+| |+.||..... ......+.... ..+.. ..
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~---~~~~~~~~~~~-~~~~~----~~ 227 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---REVLDQVERGY-RMPCP----PE 227 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh---HHHHHHHhcCC-CCCCc----cc
Confidence 221 122345678999999988889999999999999999999 8888864432 11122222211 11111 11
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
....+.+++.+||+.||++|||+.++++
T Consensus 228 ~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 228 CPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 2235789999999999999999999875
No 264
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.1e-41 Score=298.12 Aligned_cols=254 Identities=21% Similarity=0.332 Sum_probs=197.3
Q ss_pred HHHHHHhcCCCCcCee--eecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEe
Q 042457 82 EEIIVATEDFDIKYCI--GTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCL 157 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~l--g~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 157 (361)
.+.....++|.+.+.+ |+|+||.||++.. .++..+|+|......... .|......+ +|+|++++++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~ 79 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVT 79 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEe
Confidence 3444445677777776 9999999999965 468889999986543221 122222222 7999999999999
Q ss_pred eCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC-CeEEee
Q 042457 158 HKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL-EAFVAD 236 (361)
Q Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~-~~kl~D 236 (361)
..+..++||||+++++|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++ .++|+|
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 80 TLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred cCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEec
Confidence 9999999999999999999997654 689999999999999999999999 999999999999999998 999999
Q ss_pred ecCccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchh-HhhhhcccCCC
Q 042457 237 FGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIM-LIDLLDQRAPS 315 (361)
Q Consensus 237 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~ 315 (361)
||++...... ....++..|+|||++.+..++.++||||||+++|||++|+.||........... ...........
T Consensus 154 fg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 229 (267)
T PHA03390 154 YGLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPF 229 (267)
T ss_pred CccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCc
Confidence 9998765432 223578899999999988899999999999999999999999974432211111 11111111111
Q ss_pred CCCChhhHHHHHHHHHHHhhhcCCCCCCCCC-ccccccCCCCCC
Q 042457 316 PIDDQTVIQDIILVSKIAFACLRSKPKSRPT-MRRSFPNPEINP 358 (361)
Q Consensus 316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~eil~hp~~~~ 358 (361)
+. .....+.+++.+||+.+|.+||+ ++|+++||||+.
T Consensus 230 ~~------~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 230 IK------NVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred cc------ccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 11 12224889999999999999996 699999999973
No 265
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.7e-42 Score=316.40 Aligned_cols=264 Identities=21% Similarity=0.297 Sum_probs=201.6
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC-----Ce
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK-----KC 161 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 161 (361)
.++|.+.+.||+|+||.||++.. .+|+.||||.+............+..|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45788999999999999999965 4689999999875433222245677899999999999999999988654 34
Q ss_pred EEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
.++++||+. ++|.+++.... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 799999995 68888887554 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhh-------------
Q 042457 242 LLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLID------------- 307 (361)
Q Consensus 242 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~------------- 307 (361)
.............++..|+|||.+.+ ..++.++||||||+++|+|++|+.||..............
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 66443333334457889999998764 4688999999999999999999999864321100000000
Q ss_pred -------hhcccCCCCCC--ChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 308 -------LLDQRAPSPID--DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 308 -------~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
........+.. ..........+.+++.+||+.+|++|||++|+++||||+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~ 296 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS 296 (337)
T ss_pred CchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence 00000000000 0000011234789999999999999999999999999965
No 266
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5.3e-42 Score=308.48 Aligned_cols=265 Identities=28% Similarity=0.373 Sum_probs=202.1
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC----
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK---- 160 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 160 (361)
...++|++.+.||+|+||.||+|... +|+.||+|.+............+..|++++++++|||++++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999775 5889999999765433333356778999999999999999999987654
Q ss_pred ------eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEE
Q 042457 161 ------CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFV 234 (361)
Q Consensus 161 ------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl 234 (361)
..++++||+++ ++...+.... ..+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEe
Confidence 78999999976 6666665432 2589999999999999999999999 9999999999999999999999
Q ss_pred eeecCccccCCCCC-Ccccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc
Q 042457 235 ADFGVARLLHSDSS-NRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR 312 (361)
Q Consensus 235 ~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 312 (361)
+|||++........ ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...................
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSP 237 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 99999986644332 1122345778999998764 457889999999999999999999987543211111111111111
Q ss_pred CCCCC---------------------CChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 313 APSPI---------------------DDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 313 ~~~~~---------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.+... ...........+.+++.+||+.||.+|||+.++++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 00000 000000012358899999999999999999999999997
No 267
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.6e-41 Score=297.00 Aligned_cols=243 Identities=23% Similarity=0.384 Sum_probs=195.1
Q ss_pred eeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCChh
Q 042457 96 CIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLF 175 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~ 175 (361)
.||+|+||.||+|...+++.+|+|.+...... .....+.+|+++++.++||||+++++++...+..++||||+++++|.
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQ-ELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCH-HHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 58999999999999888999999998765433 22456889999999999999999999999999999999999999999
Q ss_pred hhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC-ccccc
Q 042457 176 CVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN-RTVVA 254 (361)
Q Consensus 176 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~ 254 (361)
+++..... .+++..+..++.+++.+|.|||+. +++|+||+|+||+++.++.++|+|||++......... .....
T Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (250)
T cd05085 81 SFLRKKKD--ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ 155 (250)
T ss_pred HHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCC
Confidence 99865432 578999999999999999999999 9999999999999999999999999998754322211 11223
Q ss_pred ccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccC-CCCCCChhhHHHHHHHHHH
Q 042457 255 GTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRA-PSPIDDQTVIQDIILVSKI 332 (361)
Q Consensus 255 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l 332 (361)
++..|+|||++.+..++.++||||||+++||+++ |..||..... ......+..... ..+.. ....+.++
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~l 226 (250)
T cd05085 156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN---QQAREQVEKGYRMSCPQK------CPDDVYKV 226 (250)
T ss_pred CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH---HHHHHHHHcCCCCCCCCC------CCHHHHHH
Confidence 4567999999988889999999999999999998 9999864432 111122221111 11111 12358899
Q ss_pred HhhhcCCCCCCCCCccccccC
Q 042457 333 AFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 333 i~~cl~~dP~~RPs~~eil~h 353 (361)
+.+||+.+|++|||+.++++.
T Consensus 227 i~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 227 MQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred HHHHcccCcccCCCHHHHHHH
Confidence 999999999999999998753
No 268
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=6.8e-42 Score=301.27 Aligned_cols=251 Identities=27% Similarity=0.493 Sum_probs=204.0
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
+..++|.+.+.||+|+||.||++..++++.||+|.+...... .+.+.+|+.++++++|+|++++++++......+++
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence 456789999999999999999998888889999998765443 35688999999999999999999999998899999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+++++|.+++..... ..+++..+..++.+++.|+.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 80 ~e~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred EeccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 999999999999976432 2589999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCC-cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhccc-CCCCCCChhh
Q 042457 246 DSSN-RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQR-APSPIDDQTV 322 (361)
Q Consensus 246 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 322 (361)
.... .....++..|+|||.+.+..++.++|+||||+++||+++ |+.||..... ......+.... .+.+...
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~--- 229 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---REVLEQVERGYRMPRPPNC--- 229 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCCCCCCCCCC---
Confidence 2111 112224568999999988889999999999999999999 9999864332 22222222221 1111111
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 323 IQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 323 ~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
...+.+++.+||+.+|++|||++++++
T Consensus 230 ---~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 230 ---PEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ---CHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 225889999999999999999999864
No 269
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=6.2e-42 Score=304.74 Aligned_cols=255 Identities=20% Similarity=0.320 Sum_probs=202.1
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeCC-----CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee-C
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLPS-----GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH-K 159 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~ 159 (361)
+..++|.+.+.||+|+||.||+|...+ +..|++|.+..... ....+.+.+|+.++++++|+|++++++++.. .
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS-EIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 456788999999999999999997755 68899999875433 3335778899999999999999999999876 4
Q ss_pred CeEEEEEEeccCCChhhhhccCCcc-----CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEE
Q 042457 160 KCMFLIYKYMRRGSLFCVLRNDDEA-----IQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFV 234 (361)
Q Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl 234 (361)
...++++||+++++|.+++...... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEE
Confidence 6789999999999999998764322 4689999999999999999999999 9999999999999999999999
Q ss_pred eeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcc
Q 042457 235 ADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQ 311 (361)
Q Consensus 235 ~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 311 (361)
+|||+++.+...... .....++..|+|||++.+..++.++||||||+++||+++ |+.||...... . .......
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~-~~~~~~~ 234 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF---E-MAAYLKD 234 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH---H-HHHHHHc
Confidence 999999765432211 112335678999999988889999999999999999999 99998754321 1 1111111
Q ss_pred cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 312 RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
......... ....+.+++.+||+.||++|||+.++++
T Consensus 235 ~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 235 GYRLAQPIN----CPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred CCCCCCCCc----CCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 111111110 1124789999999999999999999875
No 270
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6.7e-42 Score=303.96 Aligned_cols=255 Identities=23% Similarity=0.340 Sum_probs=202.8
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK 159 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 159 (361)
+..++|.+.+.||+|+||.||+|... .+..||+|.+...... .....+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM-RERIEFLNEASVMKEFNCHHVVRLLGVVSTG 81 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH-HHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence 34567888999999999999999663 2468999998755432 2346788999999999999999999999999
Q ss_pred CeEEEEEEeccCCChhhhhccCCc-------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCe
Q 042457 160 KCMFLIYKYMRRGSLFCVLRNDDE-------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEA 232 (361)
Q Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~ 232 (361)
...++||||+++++|.+++..... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCE
Confidence 999999999999999999865321 22478899999999999999999999 99999999999999999999
Q ss_pred EEeeecCccccCCCCC--CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhh
Q 042457 233 FVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLL 309 (361)
Q Consensus 233 kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 309 (361)
||+|||+++....... ......++..|+|||.+.+..++.++||||||+++||+++ |..||..... ........
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~~~~~ 235 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN---EEVLKFVI 235 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---HHHHHHHh
Confidence 9999999876543321 1222345778999999988889999999999999999998 9999864332 22222222
Q ss_pred cccC-CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 310 DQRA-PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 310 ~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.... ..+... ...+.+++.+||+.+|++|||+.++++.
T Consensus 236 ~~~~~~~~~~~------~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 236 DGGHLDLPENC------PDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred cCCCCCCCCCC------CHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 2211 112111 2358899999999999999999999763
No 271
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.3e-41 Score=300.75 Aligned_cols=250 Identities=21% Similarity=0.237 Sum_probs=193.7
Q ss_pred eeeecCceeEEEEEe-CCCCEEEEEEeccCcchH-HHHHHHHHHH---HHHhcCCCCcceeeeEEEeeCCeEEEEEEecc
Q 042457 96 CIGTGGYGSVYRAQL-PSGKIVALKKLHHSETEL-AFLESFQTEA---RLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMR 170 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~---~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 170 (361)
.||+|+||.||++.. .+++.||+|.+....... .....+..|. ..++..+||||+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 389999999999965 468899999886543211 1112233333 34455689999999999999999999999999
Q ss_pred CCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCc
Q 042457 171 RGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR 250 (361)
Q Consensus 171 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 250 (361)
+++|..++.... .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++....... .
T Consensus 81 g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--~ 152 (278)
T cd05606 81 GGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--P 152 (278)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--C
Confidence 999999886543 689999999999999999999999 99999999999999999999999999987553322 2
Q ss_pred cccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHH
Q 042457 251 TVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILV 329 (361)
Q Consensus 251 ~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 329 (361)
....|+..|+|||.+.++ .++.++||||+|+++|||++|+.||......................+... ...+
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------s~~~ 226 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF------SPEL 226 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcC------CHHH
Confidence 234688999999998744 688999999999999999999999976533222221111111111111111 1248
Q ss_pred HHHHhhhcCCCCCCCC-----CccccccCCCCCCC
Q 042457 330 SKIAFACLRSKPKSRP-----TMRRSFPNPEINPS 359 (361)
Q Consensus 330 ~~li~~cl~~dP~~RP-----s~~eil~hp~~~~~ 359 (361)
.+++.+|+..+|.+|| ++.++++||||++.
T Consensus 227 ~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 227 RSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred HHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 8899999999999999 99999999999863
No 272
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.7e-41 Score=303.67 Aligned_cols=251 Identities=26% Similarity=0.436 Sum_probs=199.7
Q ss_pred cCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 162 (361)
.+|.+.+.||+|+||.||+|... ++..+++|.+...... ....+.+|+..+++++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA--ARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL 82 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHH--HHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence 45788889999999999999642 3456899988654432 236788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhccCCc-------------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC
Q 042457 163 FLIYKYMRRGSLFCVLRNDDE-------------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK 229 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~ 229 (361)
++||||+++++|.+++..... ...+++..++.++.|++.|++|||++ +++|+||||+||+++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 999999999999999865321 22489999999999999999999999 99999999999999999
Q ss_pred CCeEEeeecCccccCCCCC--CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHh
Q 042457 230 LEAFVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLI 306 (361)
Q Consensus 230 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 306 (361)
+.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++|||+| |+.||..... .....
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~~ 236 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN---TEVIE 236 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHH
Confidence 9999999999976543221 1122345778999999998899999999999999999999 9999764332 11222
Q ss_pred hhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 307 DLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
............. ....+.+++.+||+.||++|||++++++
T Consensus 237 ~~~~~~~~~~~~~-----~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 237 CITQGRVLERPRV-----CPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHhCCCCCCCCcc-----CCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 2222222211111 1224889999999999999999999875
No 273
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2e-42 Score=315.68 Aligned_cols=264 Identities=23% Similarity=0.318 Sum_probs=203.0
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee----CCeE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH----KKCM 162 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~ 162 (361)
..+|++.+.||+|++|.||+|.. .+|+.||+|++............+..|+.+++.++|+||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 46789999999999999999965 468999999987654333335677789999999999999999998763 3468
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++|+||+. ++|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccccee
Confidence 99999995 68988886554 589999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCC----cccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhh----------
Q 042457 243 LHSDSSN----RTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLID---------- 307 (361)
Q Consensus 243 ~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~---------- 307 (361)
....... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||..............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 5432211 123467889999998765 4588999999999999999999999965432110000000
Q ss_pred ----------hhcccCCCCCCC--hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 308 ----------LLDQRAPSPIDD--QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 308 ----------~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
............ .........+.+++.+||+.+|.+|||+.++++||||++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~ 299 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ 299 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence 000000000000 000111345889999999999999999999999999965
No 274
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.4e-41 Score=304.07 Aligned_cols=251 Identities=25% Similarity=0.418 Sum_probs=197.4
Q ss_pred CCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
+|.+.+.||+|+||.||+|... ....+++|.+...... .....+.+|+.+++.++||||+++++.+...+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS-SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH-HHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 4678889999999999999652 2357899988755443 23467889999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhccCC---------------------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCC
Q 042457 164 LIYKYMRRGSLFCVLRNDD---------------------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSN 222 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~ 222 (361)
+++||+.+++|.+++.... ....+++..++.++.|++.||.|||+. +++||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhh
Confidence 9999999999999876421 123588999999999999999999999 9999999999
Q ss_pred CeeeCCCCCeEEeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccC
Q 042457 223 NILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSF 299 (361)
Q Consensus 223 Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~ 299 (361)
||++++++.++|+|||+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~- 235 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP- 235 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-
Confidence 999999999999999998765332221 122335678999999888889999999999999999999 9999864332
Q ss_pred CcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 300 NPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
. ............+.... ....+.+++.+||+.+|++|||+.|+++
T Consensus 236 --~-~~~~~~~~~~~~~~~~~----~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 236 --E-RLFNLLKTGYRMERPEN----CSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred --H-HHHHHHhCCCCCCCCCC----CCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 1 12222222111111111 1124789999999999999999999875
No 275
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.8e-41 Score=298.21 Aligned_cols=246 Identities=28% Similarity=0.466 Sum_probs=201.4
Q ss_pred CeeeecCceeEEEEEeCC----CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEecc
Q 042457 95 YCIGTGGYGSVYRAQLPS----GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMR 170 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 170 (361)
+.||+|+||.||++.... +..|++|.+....... ..+.+..|++.++.++|+|++++++++......+++|||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 358999999999997753 7889999998765543 35788899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCc------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 171 RGSLFCVLRNDDE------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 171 ~g~L~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
+++|.+++..... ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||.+....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccccc
Confidence 9999999987521 23689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCC--CCcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhccc-CCCCCCCh
Q 042457 245 SDS--SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQR-APSPIDDQ 320 (361)
Q Consensus 245 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 320 (361)
... .......++..|+|||.+.+..++.++||||+|+++|||++ |..||..... ........... ...+...
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~- 232 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---EEVLEYLRKGYRLPKPEYC- 232 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCCCCCCccC-
Confidence 432 22233457889999999988889999999999999999999 6999876532 22222222211 1111111
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
...+.+++.+||+.||++|||+.|++++
T Consensus 233 -----~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 233 -----PDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred -----ChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 2358899999999999999999999875
No 276
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.3e-42 Score=327.54 Aligned_cols=269 Identities=18% Similarity=0.210 Sum_probs=191.9
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeCC--CCEEEEEEe---------------ccCcchHHHHHHHHHHHHHHhcCCCCcc
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLPS--GKIVALKKL---------------HHSETELAFLESFQTEARLLSQIRHRNI 149 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~---------------~~~~~~~~~~~~~~~e~~~l~~l~h~ni 149 (361)
..++|++.+.||+|+||+||++.... +...+.|.+ +...........+.+|+.++++++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999986432 222222211 0011112234568899999999999999
Q ss_pred eeeeEEEeeCCeEEEEEEeccCCChhhhhccCCc--cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeC
Q 042457 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDE--AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLN 227 (361)
Q Consensus 150 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~ 227 (361)
+++++++...+..+++++++. ++|.+++..... .......+...++.|++.||.|||+. +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999999999999999999985 567666644321 11234567788999999999999999 999999999999999
Q ss_pred CCCCeEEeeecCccccCCCCC-CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHh
Q 042457 228 SKLEAFVADFGVARLLHSDSS-NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLI 306 (361)
Q Consensus 228 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 306 (361)
.++.+||+|||++..+..... ......||..|+|||++.+..++.++|||||||++|||++|..++...........+.
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 999999999999987654332 2223568999999999999999999999999999999999875432211111111111
Q ss_pred hhhccc------CCC-----------------CCCChhhHH---HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 307 DLLDQR------APS-----------------PIDDQTVIQ---DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 307 ~~~~~~------~~~-----------------~~~~~~~~~---~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.+.... .+. +........ ....+.+++.+||+.||.+|||+.|+|+||||...
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 111100 000 000000000 01235677889999999999999999999999764
No 277
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1e-41 Score=303.47 Aligned_cols=257 Identities=23% Similarity=0.282 Sum_probs=194.9
Q ss_pred CCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeC--CeEEEEE
Q 042457 91 FDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGFCLHK--KCMFLIY 166 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~ 166 (361)
|++.+.||+|+||.||+|.. .+++.||+|.++........ .....|+..+.++. |+|++++++++.+. +..++|+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 56778899999999999965 46889999998765333222 23457888888885 99999999999987 8899999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||++ ++|.+.+.... ..+++.++..++.|++.||.|||+. +++|+||+|+||+++. +.+||+|||++......
T Consensus 80 e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 80 ELMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred ecCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 9997 57777776533 2589999999999999999999999 9999999999999999 99999999999866433
Q ss_pred CCCccccccccccccccccc-ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc-----------ccC-
Q 042457 247 SSNRTVVAGTHGYIAPELAY-TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD-----------QRA- 313 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~-----------~~~- 313 (361)
... ....++..|+|||.+. +..++.++|||||||++|||++|+.||......+.......... ...
T Consensus 153 ~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 153 PPY-TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred CCc-CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 222 2245788999999764 45678899999999999999999999865432111000000000 000
Q ss_pred ---CCCCCChh-----hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 314 ---PSPIDDQT-----VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 314 ---~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
..+..... .......+.+++.+||+++|++|||++++++||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 00000000 01123468999999999999999999999999997
No 278
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-41 Score=316.02 Aligned_cols=258 Identities=23% Similarity=0.381 Sum_probs=203.4
Q ss_pred HHHHHhcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEE
Q 042457 83 EIIVATEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGF 155 (361)
Q Consensus 83 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~ 155 (361)
++.+..++|.+.+.||+|+||.||+|.+. .+..||+|++........ .+.+..|+.++.++. ||||++++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~-~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSE-KQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhH-HHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 45666778888999999999999999753 346799999986543332 356889999999997 9999999999
Q ss_pred EeeCCeEEEEEEeccCCChhhhhccCCc----------------------------------------------------
Q 042457 156 CLHKKCMFLIYKYMRRGSLFCVLRNDDE---------------------------------------------------- 183 (361)
Q Consensus 156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------- 183 (361)
|...+..++|+||+++|+|.++++....
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999864321
Q ss_pred -------------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCC
Q 042457 184 -------------------------------------------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDIS 220 (361)
Q Consensus 184 -------------------------------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk 220 (361)
...+++..++.++.|++.||.|||+. +++|+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlk 266 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLA 266 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCC
Confidence 12467888999999999999999998 99999999
Q ss_pred CCCeeeCCCCCeEEeeecCccccCCCCC--CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcc
Q 042457 221 SNNILLNSKLEAFVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLS 297 (361)
Q Consensus 221 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~ 297 (361)
|+|||+++++.+||+|||+++....... ......++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999976532221 1122346788999999988889999999999999999998 899986433
Q ss_pred cCCcchhHhhhhccc--CCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 298 SFNPKIMLIDLLDQR--APSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 298 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.. .......... ...+... ...+.+++.+||+.+|.+||++++|++.
T Consensus 347 ~~---~~~~~~~~~~~~~~~p~~~------~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 347 MN---EQFYNAIKRGYRMAKPAHA------SDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred ch---HHHHHHHHcCCCCCCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 21 1111222211 1111111 1258899999999999999999999864
No 279
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.8e-41 Score=298.07 Aligned_cols=242 Identities=21% Similarity=0.355 Sum_probs=190.5
Q ss_pred eeeecCceeEEEEEeC---CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCC
Q 042457 96 CIGTGGYGSVYRAQLP---SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
.||+|+||.||+|.+. ++..||+|.+..... ....+.+.+|+.++++++|+||+++++++.. +..++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE-KSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC-hHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCC
Confidence 3899999999999653 355799999876543 3334678999999999999999999998864 5689999999999
Q ss_pred ChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCc--
Q 042457 173 SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR-- 250 (361)
Q Consensus 173 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-- 250 (361)
+|.+++..... .+++..+++++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++..........
T Consensus 80 ~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 80 PLNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 99999875332 589999999999999999999999 99999999999999999999999999997654332211
Q ss_pred -ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccC-CCCCCChhhHHHHH
Q 042457 251 -TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRA-PSPIDDQTVIQDII 327 (361)
Q Consensus 251 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 327 (361)
....++..|+|||.+.+..++.++||||||+++||+++ |+.||...... .....+..... ..+.. ...
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~------~~~ 225 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP---EVMSFIEQGKRLDCPAE------CPP 225 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHHHCCCCCCCCCC------CCH
Confidence 11223568999999888889999999999999999997 99998754321 11222222211 11111 122
Q ss_pred HHHHHHhhhcCCCCCCCCCccccccC
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.+.+++.+||+.||++||++.+|.+.
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 47889999999999999999998753
No 280
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.8e-42 Score=313.40 Aligned_cols=263 Identities=22% Similarity=0.350 Sum_probs=199.4
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC-----e
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK-----C 161 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~ 161 (361)
+++|.+.+.||+|+||.||+|.. .+|+.||+|.+...... .....+..|+.+++.++|+||+++++++.... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQ-TFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccc-hhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 46799999999999999999965 47899999998643322 23466788999999999999999999876543 5
Q ss_pred EEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
.++++||+.+ +|.+++... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.
T Consensus 83 ~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 83 VYIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccccee
Confidence 7999999964 787777543 589999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCC---cccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc-----
Q 042457 242 LLHSDSSN---RTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR----- 312 (361)
Q Consensus 242 ~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~----- 312 (361)
........ .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.............+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 65432221 122457889999998654 568899999999999999999999986432111000000000000
Q ss_pred --------------CCCCCCCh---hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 313 --------------APSPIDDQ---TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 313 --------------~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.+...... ........+.+++.+||+.||++|||+.|+++||||++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 00000000 000112347899999999999999999999999999863
No 281
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.2e-41 Score=302.94 Aligned_cols=251 Identities=27% Similarity=0.451 Sum_probs=199.0
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCe
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKC 161 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 161 (361)
.++|.....||+|+||.||++... ++..+++|.+..... .....+..|++.++.++|+||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE--SARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH--HHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 356788899999999999999642 356799998875443 234678999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhccCCc------------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDE------------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK 229 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~ 229 (361)
.++++||+++++|.+++..... ...+++..++.++.|++.|++|||+. +++|+||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC
Confidence 9999999999999999875432 12588999999999999999999999 99999999999999999
Q ss_pred CCeEEeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHh
Q 042457 230 LEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLI 306 (361)
Q Consensus 230 ~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 306 (361)
+.++|+|||++......... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .....
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~ 235 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN---TEAIE 235 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH---HHHHH
Confidence 99999999998755332211 112234678999999998899999999999999999998 9999864332 11122
Q ss_pred hhhcccCC-CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 307 DLLDQRAP-SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 307 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
........ .+... ...+.+++.+||+.||.+||+++++++
T Consensus 236 ~~~~~~~~~~~~~~------~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 236 CITQGRELERPRTC------PPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHcCccCCCCCCC------CHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 22222111 11111 124789999999999999999999875
No 282
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.9e-41 Score=301.28 Aligned_cols=257 Identities=26% Similarity=0.339 Sum_probs=198.5
Q ss_pred CCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC---CCCcceeeeEEEeeCCe-----
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQI---RHRNIVKLYGFCLHKKC----- 161 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~----- 161 (361)
|++.+.||+|+||.||+|... +++.+|+|.+............+..|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567788999999999999876 489999999975544333234566777766655 69999999999998776
Q ss_pred EEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
.+++|||+.+ +|.+++..... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcce
Confidence 9999999974 78888865432 2589999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc---------
Q 042457 242 LLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR--------- 312 (361)
Q Consensus 242 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--------- 312 (361)
........ ....++..|+|||.+.+..++.++|+||||+++|||++|+.||......+. ...+.+..
T Consensus 156 ~~~~~~~~-~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 156 IYSFEMAL-TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ---LDKIFDVIGLPSEEEWP 231 (287)
T ss_pred eccCCccc-ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH---HHHHHHHcCCCChHhcC
Confidence 76433222 223468889999999988899999999999999999999999875443111 11111100
Q ss_pred ---------CCCCCC---ChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 313 ---------APSPID---DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 313 ---------~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.+.... ..........+.+++.+||+.||.+||++.|+++||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 000000 00011123457899999999999999999999999997
No 283
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.4e-41 Score=302.85 Aligned_cols=252 Identities=23% Similarity=0.349 Sum_probs=198.8
Q ss_pred CCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
+|++.+.||+|+||.||+|... ++..||+|++...... ...+.+..|+.+++.++||||+++++++...+..+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEG-PLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCH-HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 4667788999999999999753 2478999999765432 23467889999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhccCC-------------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC
Q 042457 164 LIYKYMRRGSLFCVLRNDD-------------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL 230 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~ 230 (361)
+++||+++++|.+++.... ....+++..+..++.|++.||.|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCC
Confidence 9999999999999885321 123478889999999999999999999 999999999999999999
Q ss_pred CeEEeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhh
Q 042457 231 EAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLID 307 (361)
Q Consensus 231 ~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 307 (361)
.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||++ |..||..... ......
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~ 238 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---QDVIEM 238 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH
Confidence 9999999998765332211 122335678999999988889999999999999999998 8888765332 222233
Q ss_pred hhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 308 LLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
+....... ... .....+.+++.+||+.+|.+|||+++|++.
T Consensus 239 i~~~~~~~-~~~----~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 239 IRNRQVLP-CPD----DCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HHcCCcCC-CCC----CCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 33332211 111 112248899999999999999999999864
No 284
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.8e-41 Score=299.76 Aligned_cols=250 Identities=29% Similarity=0.455 Sum_probs=199.6
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC----CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP----SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
..+|++.+.||+|+||.||+|... .+..+|+|.++..... ...+.+..|+.++++++||||+++++++...+..+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE-KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH-HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 356888999999999999999653 2347999998764433 23568899999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
++|||+++++|.+++..... .+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++...
T Consensus 82 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 99999999999999976542 579999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCcc---cccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhccc-CCCCCC
Q 042457 244 HSDSSNRT---VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQR-APSPID 318 (361)
Q Consensus 244 ~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 318 (361)
........ ...++..|+|||.+.+..++.++|+||||+++||+++ |..||......+ ....+.+.. .+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~ 233 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAIEEGYRLPAPMD 233 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHHhCCCcCCCCCC
Confidence 44322111 1123567999999988889999999999999999887 999987543311 122222221 111111
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
....+.+++.+||+.+|.+|||+.++++
T Consensus 234 ------~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 234 ------CPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred ------CCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 1224788999999999999999999875
No 285
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.3e-41 Score=311.31 Aligned_cols=256 Identities=23% Similarity=0.371 Sum_probs=198.4
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEe------CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEee
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQL------PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLH 158 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 158 (361)
...++|++.+.||+|+||.||+|.. .+++.||||.++..... .....+.+|+.++.++ +|+||++++++|..
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTK 82 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh-HHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence 4456899999999999999999963 35788999999765433 2246788999999999 68999999998876
Q ss_pred C-CeEEEEEEeccCCChhhhhccCCc------------------------------------------------------
Q 042457 159 K-KCMFLIYKYMRRGSLFCVLRNDDE------------------------------------------------------ 183 (361)
Q Consensus 159 ~-~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------ 183 (361)
. ...+++|||+++|+|.+++.....
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (343)
T cd05103 83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE 162 (343)
T ss_pred CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence 4 467899999999999998864321
Q ss_pred ----------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC--cc
Q 042457 184 ----------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RT 251 (361)
Q Consensus 184 ----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~ 251 (361)
...+++.++..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++......... ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 239 (343)
T cd05103 163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKG 239 (343)
T ss_pred hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcC
Confidence 12368888999999999999999999 9999999999999999999999999998765332221 11
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhccc-CCCCCCChhhHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQR-APSPIDDQTVIQDIILV 329 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 329 (361)
...++..|+|||.+.+..++.++||||||+++|||++ |..||...... ........... ...+... ...+
T Consensus 240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~------~~~~ 311 (343)
T cd05103 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPDYT------TPEM 311 (343)
T ss_pred CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--HHHHHHHhccCCCCCCCCC------CHHH
Confidence 2235667999999988889999999999999999997 99998653321 11111111111 1111111 1247
Q ss_pred HHHHhhhcCCCCCCCCCccccccC
Q 042457 330 SKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 330 ~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.+++.+||+.||++|||+.|+++|
T Consensus 312 ~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHHHHccCChhhCcCHHHHHHH
Confidence 889999999999999999999976
No 286
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.3e-41 Score=302.41 Aligned_cols=253 Identities=24% Similarity=0.378 Sum_probs=207.6
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeCCeEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIR-HRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 165 (361)
++|.+.+.||+|+||.||++... +|+.||+|++..... .....+.+..|..++++++ |+||+++++++...+..+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888899999999999999764 789999999875332 2223467888999999998 99999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+++++|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999998654 689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCC--------------------CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhH
Q 042457 246 DSS--------------------NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIML 305 (361)
Q Consensus 246 ~~~--------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 305 (361)
... ......++..|+|||...+..++.++|+||||++++++++|+.||..... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~ 231 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE---YLTF 231 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH---HHHH
Confidence 221 11223467899999998888899999999999999999999999875542 1112
Q ss_pred hhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCc----cccccCCCC
Q 042457 306 IDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTM----RRSFPNPEI 356 (361)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~eil~hp~~ 356 (361)
..........+... ...+.+++.+||+.+|++|||+ +++++||||
T Consensus 232 ~~~~~~~~~~~~~~------~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 232 QKILKLEYSFPPNF------PPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHhcCCCCCCcc------CHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 22222222222111 2247899999999999999999 999999998
No 287
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.4e-41 Score=299.16 Aligned_cols=250 Identities=26% Similarity=0.434 Sum_probs=198.4
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
..++|.+...||+|++|.||++...++..+|+|.+...... .+.+.+|+.++++++|+|++++++++. .+..+++|
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM---PEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVT 79 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCcc---HHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEE
Confidence 34568888999999999999998877778999988654332 256788999999999999999999875 45689999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 80 EFMGKGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EcCCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 99999999999976432 2578999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCC-cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 247 SSN-RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 247 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
... .....++..|+|||...+..++.++||||||+++|||++ |+.||..... .......... ...+... .
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~~-~~~~~~~----~ 227 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN---REVLEQVERG-YRMPCPQ----G 227 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcC-CCCCCCc----c
Confidence 221 122335678999999988889999999999999999999 8999875332 1122222222 1111111 1
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
....+.+++.+||++||++|||++++++
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 228 CPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1235889999999999999999999875
No 288
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.7e-41 Score=300.26 Aligned_cols=250 Identities=25% Similarity=0.365 Sum_probs=194.1
Q ss_pred CCCcCeeeecCceeEEEEEe-----CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--CeEE
Q 042457 91 FDIKYCIGTGGYGSVYRAQL-----PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KCMF 163 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 163 (361)
|.+.+.||+|+||.||++.+ .+++.||+|.+...... .....+.+|+++++.++||||+++++++... ...+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ-QNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 37888999999999988643 36788999998765432 2346788999999999999999999998764 4589
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
++|||+++++|.+++... .+++.++..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++...
T Consensus 85 lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 85 LIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccccc
Confidence 999999999999998754 489999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCC---cccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCc-----------chhHhhhh
Q 042457 244 HSDSSN---RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNP-----------KIMLIDLL 309 (361)
Q Consensus 244 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-----------~~~~~~~~ 309 (361)
...... .....++..|+|||.+.+..++.++||||||+++|||+||+.|+........ ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence 433221 1122356679999999888899999999999999999999999764321100 00011111
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 310 DQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
......+.. ......+.+++.+||+.+|++|||++++++
T Consensus 238 ~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 238 ERGMRLPCP----KNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hcCCCCCCC----CCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 111111101 011235889999999999999999999875
No 289
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.6e-41 Score=333.10 Aligned_cols=254 Identities=26% Similarity=0.393 Sum_probs=197.2
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 47889999999999999999764 589999999875432 2233467899999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCC--------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 167 KYMRRGSLFCVLRNDD--------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
||++|++|.+++.... .....++..++.++.|+++||+|||+. +++||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999886421 112466788899999999999999999 99999999999999999999999999
Q ss_pred CccccCCCC------------------CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCC
Q 042457 239 VARLLHSDS------------------SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFN 300 (361)
Q Consensus 239 ~~~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 300 (361)
++....... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 997652111 00112358999999999999999999999999999999999999987533211
Q ss_pred cchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccc
Q 042457 301 PKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSF 351 (361)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 351 (361)
...... ...+............+.+++.+|++.||++||+..+.+
T Consensus 239 --i~~~~~----i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 239 --ISYRDV----ILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283 (932)
T ss_pred --hhhhhh----ccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 111111 111111000111123478899999999999998654433
No 290
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.1e-41 Score=301.23 Aligned_cols=250 Identities=26% Similarity=0.419 Sum_probs=196.8
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCC----EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGK----IVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 162 (361)
.++|++.+.||+|+||.||+|.+ .+|+ .||+|.+...... ...+.+..|+.+++.++|+||+++++++... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~ 83 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSP-KANKEILDEAYVMAGVGSPYVCRLLGICLTS-TV 83 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCH-HHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-Cc
Confidence 46788899999999999999975 3444 4899998754433 2346788999999999999999999999764 47
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++++||+++|+|.+++..... .+++..++.++.|++.||+|||+. +++|+||||+|||+++++.+||+|||+++.
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceee
Confidence 899999999999999976432 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc--ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 243 LHSDSSNR--TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 243 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
........ ....++..|+|||...+..++.++||||||+++|||++ |..||...... .....+......+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~ 234 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR----EIPDLLEKGERLPQPP 234 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHCCCcCCCCc
Confidence 64332211 11234678999999988889999999999999999998 99998643321 1112222211111111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
. ....+.+++.+||+.||++|||+.++++
T Consensus 235 ~----~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 235 I----CTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred c----CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1 1224788999999999999999999984
No 291
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.4e-43 Score=318.15 Aligned_cols=254 Identities=24% Similarity=0.398 Sum_probs=206.0
Q ss_pred CCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCc--chHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCe--EEEEE
Q 042457 92 DIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSE--TELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKC--MFLIY 166 (361)
Q Consensus 92 ~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~lv~ 166 (361)
+....||+|+|-+||+|.. .+|-.||--.++..+ ......+.|..|+.+|+.|+|+||++++.++.+... .-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 3455699999999999954 357777655443332 223345889999999999999999999999987654 78899
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC-CCeEEeeecCccccCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK-LEAFVADFGVARLLHS 245 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfg~~~~~~~ 245 (361)
|.|..|+|..|+.+.+ .++...+..|++||++||.|||++ .|+|+|||||.+||+|+++ |.|||+|+|+|.....
T Consensus 123 EL~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred ecccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 9999999999998876 688999999999999999999987 6789999999999999876 8999999999987754
Q ss_pred CCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
.. .....|||.|||||+.. ..|++..||||||+.|+||+|+..||..-. ++......+..+..|.....-.
T Consensus 199 s~--aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~--n~AQIYKKV~SGiKP~sl~kV~---- 269 (632)
T KOG0584|consen 199 SH--AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT--NPAQIYKKVTSGIKPAALSKVK---- 269 (632)
T ss_pred cc--cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC--CHHHHHHHHHcCCCHHHhhccC----
Confidence 33 33378999999999876 789999999999999999999999986432 2334445555555543222111
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
..++.++|.+|+.. .++|||+.|+|+||||+..
T Consensus 270 dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 270 DPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred CHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 12488999999999 9999999999999999864
No 292
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.5e-41 Score=299.30 Aligned_cols=237 Identities=22% Similarity=0.329 Sum_probs=186.2
Q ss_pred eeeecCceeEEEEEeCC-------------CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeE
Q 042457 96 CIGTGGYGSVYRAQLPS-------------GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 162 (361)
.||+|+||.||+|.+.+ ...|++|.+..... .....+.+|+.+++.++||||+++++++......
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR--DISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh--hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 58999999999997532 23589998765433 2346788899999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCC-------eEEe
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLE-------AFVA 235 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~-------~kl~ 235 (361)
+++|||+++++|..++..... .+++..+..++.|++.||+|||+. +++|+||||+|||++.++. ++++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 999999999999988865432 589999999999999999999999 9999999999999987654 8999
Q ss_pred eecCccccCCCCCCccccccccccccccccc-ccccCccchhhhHHHHHHHHH-hCCCCCCCcccCCcchhHhhhhcccC
Q 042457 236 DFGVARLLHSDSSNRTVVAGTHGYIAPELAY-TMVVTEKCDVFGFGVVALEVL-MGRHPGDLLSSFNPKIMLIDLLDQRA 313 (361)
Q Consensus 236 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~ 313 (361)
|||++...... ....++..|+|||.+. +..++.++||||||+++|||+ +|+.|+....... .........
T Consensus 155 d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~----~~~~~~~~~ 226 (262)
T cd05077 155 DPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE----KERFYEGQC 226 (262)
T ss_pred CCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH----HHHHHhcCc
Confidence 99998654322 2234678899999876 566889999999999999998 5888876432211 111111111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 314 PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
..... ....+.+++.+||+.||.+||++.+|+++
T Consensus 227 ~~~~~------~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 227 MLVTP------SCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred cCCCC------ChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 11111 11247899999999999999999999875
No 293
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.9e-41 Score=304.15 Aligned_cols=251 Identities=26% Similarity=0.406 Sum_probs=195.6
Q ss_pred cCCCCcCeeeecCceeEEEEEeCC-CC--EEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLPS-GK--IVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 164 (361)
++|++.+.||+|+||.||+|...+ +. .+++|.++..... ...+.+..|+.++.++ +||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASE-NDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCH-HHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 468889999999999999997643 33 4788888743322 2246788999999999 79999999999999999999
Q ss_pred EEEeccCCChhhhhccCC-------------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCC
Q 042457 165 IYKYMRRGSLFCVLRNDD-------------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLE 231 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~ 231 (361)
++||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++|+||||+|||+++++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCe
Confidence 999999999999986532 112488999999999999999999999 9999999999999999999
Q ss_pred eEEeeecCccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhc
Q 042457 232 AFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLD 310 (361)
Q Consensus 232 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 310 (361)
+||+|||++........ ......+..|+|||...+..++.++||||||+++|||++ |..||..... .........
T Consensus 158 ~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~---~~~~~~~~~ 233 (297)
T cd05089 158 SKIADFGLSRGEEVYVK-KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC---AELYEKLPQ 233 (297)
T ss_pred EEECCcCCCccccceec-cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHhc
Confidence 99999999864321111 111223457999999988889999999999999999998 9999865432 111222222
Q ss_pred ccC-CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 311 QRA-PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 311 ~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
... ..+.. ....+.+++.+||+.+|.+|||+.++++.
T Consensus 234 ~~~~~~~~~------~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 234 GYRMEKPRN------CDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCCCCCCCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 211 11111 11247899999999999999999999754
No 294
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.9e-41 Score=301.14 Aligned_cols=257 Identities=26% Similarity=0.370 Sum_probs=203.2
Q ss_pred CCCCcCeeeecCceeEEEEEe----CCCCEEEEEEeccCcc--hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL----PSGKIVALKKLHHSET--ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 162 (361)
+|++.+.||+|+||.||++.. .+|..||+|++..... .....+.+..|+.+++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477888999999999999965 3788999999875432 112346678899999999 599999999999999999
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++|+||+++++|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+|||+++++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999987654 578899999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCC-Cccccccccccccccccccc--ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchh-HhhhhcccCCCCCC
Q 042457 243 LHSDSS-NRTVVAGTHGYIAPELAYTM--VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIM-LIDLLDQRAPSPID 318 (361)
Q Consensus 243 ~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~ 318 (361)
...... ......|+..|+|||.+.+. .++.++||||||+++|+|++|+.||........... .........+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE 234 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCcc
Confidence 543221 12234578899999988653 467899999999999999999999864332211111 12222222222111
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
....+.+++.+||+.||++|| +++++++||||++
T Consensus 235 ------~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 273 (290)
T cd05613 235 ------MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273 (290)
T ss_pred ------CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCccccc
Confidence 112478899999999999997 8999999999976
No 295
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2e-41 Score=302.32 Aligned_cols=260 Identities=25% Similarity=0.387 Sum_probs=201.0
Q ss_pred CCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--CeEEEEEE
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KCMFLIYK 167 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 167 (361)
|++.+.||+|++|.||+|... +|+.+|+|.+............+..|+++++.++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567788999999999999765 588999999987643333346788999999999999999999999988 78999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
|+++ +|.+++.... ..+++..++.++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred cccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 9975 8888876543 2689999999999999999999999 99999999999999999999999999998665433
Q ss_pred C-Ccccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC------------
Q 042457 248 S-NRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA------------ 313 (361)
Q Consensus 248 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------------ 313 (361)
. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....................
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 1 1222346788999997764 4578999999999999999999999875442111111111000000
Q ss_pred -----CCCCCCh---hhHHH--HHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 314 -----PSPIDDQ---TVIQD--IILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 314 -----~~~~~~~---~~~~~--~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
....... ..... ...+.+++.+||+.+|.+|||++++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 0000000 00001 3457899999999999999999999999997
No 296
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.2e-41 Score=306.27 Aligned_cols=252 Identities=26% Similarity=0.421 Sum_probs=196.1
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCC--EEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGK--IVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 163 (361)
.++|++.+.||+|+||.||+|... ++. .+++|.+..... ......+.+|++++.++ +|+||+++++++...+..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCC-HHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 356888899999999999999764 444 467777764332 23346788999999999 8999999999999999999
Q ss_pred EEEEeccCCChhhhhccCC-------------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC
Q 042457 164 LIYKYMRRGSLFCVLRNDD-------------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL 230 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~ 230 (361)
+++||+++++|.+++.... ....+++.+++.++.|++.|++|||+. +++||||||+|||++.++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCC
Confidence 9999999999999987532 123578999999999999999999999 999999999999999999
Q ss_pred CeEEeeecCccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhh
Q 042457 231 EAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLL 309 (361)
Q Consensus 231 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 309 (361)
.+||+|||++....... ......++..|+|||.+.+..++.++||||||+++|||+| |..||...... .......
T Consensus 162 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~~~ 237 (303)
T cd05088 162 VAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEKLP 237 (303)
T ss_pred cEEeCccccCcccchhh-hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH---HHHHHHh
Confidence 99999999986432111 1111224567999999888889999999999999999998 99998643321 1111111
Q ss_pred cc-cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 310 DQ-RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 310 ~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.. ....+.. ....+.+++.+||+.+|++|||+.+++++
T Consensus 238 ~~~~~~~~~~------~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 238 QGYRLEKPLN------CDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred cCCcCCCCCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11 1111111 11247899999999999999999999864
No 297
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.6e-41 Score=304.45 Aligned_cols=256 Identities=23% Similarity=0.348 Sum_probs=199.5
Q ss_pred hcCCCCcCeeeecCceeEEEEEeCC-----------------CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcce
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLPS-----------------GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIV 150 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 150 (361)
.++|++.+.||+|+||.||++...+ +..||+|.+...... ...+.+.+|++++++++|+|++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHHHHHHHHHhcCCCCEe
Confidence 4678999999999999999986542 245899998765443 3357788999999999999999
Q ss_pred eeeEEEeeCCeEEEEEEeccCCChhhhhccCCc--------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCC
Q 042457 151 KLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDE--------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSN 222 (361)
Q Consensus 151 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~ 222 (361)
++++++..++..++++||+++++|.+++..... ...+++..++.++.|++.||+|||+. +++|+||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~ 159 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATR 159 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchh
Confidence 999999999999999999999999999876431 22589999999999999999999999 9999999999
Q ss_pred CeeeCCCCCeEEeeecCccccCCCCC--CcccccccccccccccccccccCccchhhhHHHHHHHHHh--CCCCCCCccc
Q 042457 223 NILLNSKLEAFVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM--GRHPGDLLSS 298 (361)
Q Consensus 223 Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~ 298 (361)
||++++++.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 99999999999999999876533221 1222345678999999988889999999999999999998 6777754332
Q ss_pred CCcchhHhhhhcc----cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 299 FNPKIMLIDLLDQ----RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 299 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
. ......... ........ .......+.+++.+||+.||++|||+.||++
T Consensus 240 ~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 240 Q---QVIENAGHFFRDDGRQIYLPR--PPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred H---HHHHHHHhccccccccccCCC--ccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 1 111111111 00000000 0011135889999999999999999999965
No 298
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.3e-41 Score=309.43 Aligned_cols=257 Identities=21% Similarity=0.292 Sum_probs=197.2
Q ss_pred Ceeeec--CceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTG--GYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G--~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
..||.| +||+||++.. .+|+.||+|.+..........+.+.+|+.+++.++||||+++++++..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 346666 8999999976 4799999999876654445567888999999999999999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC--
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN-- 249 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-- 249 (361)
++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+.........
T Consensus 84 ~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 84 GSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 999999876432 2488999999999999999999999 9999999999999999999999999865433221111
Q ss_pred -----ccccccccccccccccccc--ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCC--------
Q 042457 250 -----RTVVAGTHGYIAPELAYTM--VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAP-------- 314 (361)
Q Consensus 250 -----~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------- 314 (361)
.....++..|+|||++.+. .++.++||||||+++|||++|+.||...... ............
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT---QMLLQKLKGPPYSPLDITTF 236 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH---HHHHHHhcCCCCCCcccccc
Confidence 1112345679999998763 4788999999999999999999998754321 111111100000
Q ss_pred ---------------------------------CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 315 ---------------------------------SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 315 ---------------------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..............+.+|+.+||+.||++|||+.|+++||||++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred chhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 00000111122345889999999999999999999999999964
No 299
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-43 Score=315.92 Aligned_cols=253 Identities=26% Similarity=0.391 Sum_probs=207.3
Q ss_pred CCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
.|...+.||+|+||.||.++. .+.+.||||++..+.. ..+...++..|+..|++++|||++.+-|+|....+.|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 456677799999999999954 4678999999876543 23345789999999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
||- |+-.+++.-... ++.+-.+..|+.+.++||+|||+. +.+|||||+.|||+++.|.|||+|||.+.....
T Consensus 107 YCl-GSAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-- 178 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-- 178 (948)
T ss_pred HHh-ccHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc--
Confidence 994 577777754432 588888999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccccc---ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 248 SNRTVVAGTHGYIAPELAY---TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
....+||+.|||||++. .+.|+-+.||||||++..||.-.++|.-.. +.-..++-+..+..|... ...|.
T Consensus 179 --AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM---NAMSALYHIAQNesPtLq--s~eWS 251 (948)
T KOG0577|consen 179 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM---NAMSALYHIAQNESPTLQ--SNEWS 251 (948)
T ss_pred --hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc---hHHHHHHHHHhcCCCCCC--CchhH
Confidence 33467999999999875 578999999999999999999999994332 333344444444443322 22233
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
+ .+..++..||++-|.+|||..++|.|+|+..+
T Consensus 252 ~--~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 252 D--YFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred H--HHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 3 58899999999999999999999999999653
No 300
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.6e-42 Score=312.80 Aligned_cols=262 Identities=24% Similarity=0.323 Sum_probs=205.1
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC-----eEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK-----CMF 163 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 163 (361)
+|.+.+.||+|++|.||+|... +|+.||+|.+..........+.+..|+..++.++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999765 4899999998765433334567889999999999999999999998775 789
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
++|||++ ++|.+++.... .+++..+..++.+++.||+|||+. +++|+||||+||+++.++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 58888887654 689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC---Cccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhh-----------
Q 042457 244 HSDSS---NRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDL----------- 308 (361)
Q Consensus 244 ~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~----------- 308 (361)
..... ......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...............
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence 54431 22334578889999998877 7899999999999999999999998754421100000000
Q ss_pred ---------hcccCCC-CCCCh-hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 309 ---------LDQRAPS-PIDDQ-TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 309 ---------~~~~~~~-~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
....... ..... ........+.+++.+||+.+|++|||+.++++||||++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 294 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ 294 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence 0000000 00000 00001234789999999999999999999999999975
No 301
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.3e-41 Score=297.08 Aligned_cols=247 Identities=26% Similarity=0.425 Sum_probs=200.8
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
..++|++.+.||.|+||.||+|.. .|+.||+|.+..... ..+.+.+|+.+++.++|+|++++++++...+..++||
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 356788899999999999999987 588999999976544 3467889999999999999999999999989999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||.++.....
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 80 EYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999999876542 2589999999999999999999999 9999999999999999999999999999766322
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
.. ....+..|+|||.+.+..++.++||||||+++||+++ |+.||..... .......... ....... ..
T Consensus 156 ~~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~-~~~~~~~----~~ 224 (256)
T cd05039 156 QD---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPHVEKG-YRMEAPE----GC 224 (256)
T ss_pred cc---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHhcC-CCCCCcc----CC
Confidence 21 2234567999999988889999999999999999997 9999865432 1111111111 1111111 11
Q ss_pred HHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
...+.+++.+||+.+|++|||+.++++
T Consensus 225 ~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 225 PPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 235889999999999999999999875
No 302
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.8e-41 Score=303.74 Aligned_cols=256 Identities=23% Similarity=0.389 Sum_probs=201.9
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEe
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCL 157 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 157 (361)
....++|.+.+.||+|+||.||++... .+..||+|.++..... ...+.+.+|+.+++++ +|+||+++++++.
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 109 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS-SEREALMSELKIMSHLGNHENIVNLLGACT 109 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh-HHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence 445567999999999999999999641 3457999998765432 2346788999999999 7999999999999
Q ss_pred eCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeee
Q 042457 158 HKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADF 237 (361)
Q Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 237 (361)
..+..+++|||+++|+|.++++.... ..+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++++||
T Consensus 110 ~~~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~df 185 (302)
T cd05055 110 IGGPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDF 185 (302)
T ss_pred cCCceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCC
Confidence 99999999999999999999975432 2389999999999999999999999 9999999999999999999999999
Q ss_pred cCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCC
Q 042457 238 GVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAP 314 (361)
Q Consensus 238 g~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 314 (361)
|++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||..... .............
T Consensus 186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~---~~~~~~~~~~~~~ 262 (302)
T cd05055 186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV---DSKFYKLIKEGYR 262 (302)
T ss_pred cccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc---hHHHHHHHHcCCc
Confidence 999765433211 112235678999999988889999999999999999998 9999865432 1111222222111
Q ss_pred CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 315 SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
...... ....+.+++.+||+.+|++|||+.|+++
T Consensus 263 ~~~~~~----~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 263 MAQPEH----APAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCCCC----CCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 111110 1124889999999999999999999875
No 303
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.5e-41 Score=296.87 Aligned_cols=248 Identities=23% Similarity=0.425 Sum_probs=200.2
Q ss_pred cCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
.+|.+.+.||+|+||.||++.+.++..+|+|.+....... ..+..|++++++++|||++++++++......++++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE---EDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCH---HHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 4677889999999999999988778899999987554332 5688999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++..... .+++..+..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 81 MEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred CCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 999999999875432 578999999999999999999999 999999999999999999999999999876533221
Q ss_pred C-cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcc-cCCCCCCChhhHHH
Q 042457 249 N-RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQ-RAPSPIDDQTVIQD 325 (361)
Q Consensus 249 ~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 325 (361)
. .....++.+|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+... ....+...
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~------ 226 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN---SEVVETINAGFRLYKPRLA------ 226 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHHhCCCCCCCCCCC------
Confidence 1 112234578999999988889999999999999999998 9999864332 1122222211 11111111
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
...+.+++.+||+.+|++|||+.+++++
T Consensus 227 ~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 227 SQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 1248899999999999999999999864
No 304
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.7e-41 Score=297.37 Aligned_cols=247 Identities=23% Similarity=0.315 Sum_probs=187.5
Q ss_pred eeeecCceeEEEEEeCC---CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCC
Q 042457 96 CIGTGGYGSVYRAQLPS---GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
.||+|+||.||+|...+ +..+|+|.+....... ....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ-EQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH-HHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 58999999999997643 4579999987655432 2357888999999999999999999999999999999999999
Q ss_pred ChhhhhccCC--ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC--
Q 042457 173 SLFCVLRNDD--EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS-- 248 (361)
Q Consensus 173 ~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 248 (361)
+|.+++.... .....++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999987533 123467788889999999999999999 999999999999999999999999999875433221
Q ss_pred Cccccccccccccccccccc-------ccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcc--cCCCCCC
Q 042457 249 NRTVVAGTHGYIAPELAYTM-------VVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQ--RAPSPID 318 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~ 318 (361)
......++..|+|||++.+. .++.++|+||||+++|||++ |+.||........ ....+... ..+.+..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~ 235 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTYTVREQQLKLPKPRL 235 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--HHHHhhcccCCCCCCcc
Confidence 11223467889999987542 35789999999999999997 9999875433211 11111111 1111111
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
... ....+.+++..|| .+|++|||++||+.
T Consensus 236 ~~~---~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 236 KLP---LSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CCC---CChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 111 1123677888998 58999999999875
No 305
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.2e-41 Score=301.86 Aligned_cols=255 Identities=23% Similarity=0.368 Sum_probs=197.3
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-----------------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcce
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-----------------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIV 150 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 150 (361)
.++|++.+.||+|+||.||++... ++..+|+|.+..... ......+..|+.+++.++|+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcc
Confidence 467899999999999999998532 234689999875533 22346788999999999999999
Q ss_pred eeeEEEeeCCeEEEEEEeccCCChhhhhccCCc--------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCC
Q 042457 151 KLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDE--------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSN 222 (361)
Q Consensus 151 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~ 222 (361)
++++++...+..+++|||+++++|.+++..... ...+++.++..++.|++.||+|||+. +++|+||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~ 159 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR 159 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence 999999999999999999999999999875321 12478889999999999999999999 9999999999
Q ss_pred CeeeCCCCCeEEeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh--CCCCCCCccc
Q 042457 223 NILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM--GRHPGDLLSS 298 (361)
Q Consensus 223 Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~ 298 (361)
||+++.++.++|+|||++..+...... .....++..|+|||...++.++.++||||||+++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 999999999999999998765432211 111234578999998888889999999999999999998 7788764432
Q ss_pred CCcchhHhhhhcc-----cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 299 FNPKIMLIDLLDQ-----RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 299 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
............. ..+.+.. ....+.+++.+||+.||++|||+.+|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 240 EQVIENTGEFFRDQGRQVYLPKPAL------CPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHHHhhccccccCCCCCC------CCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 1111111111100 1111111 1135889999999999999999999865
No 306
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=3.2e-41 Score=296.85 Aligned_cols=249 Identities=22% Similarity=0.305 Sum_probs=194.6
Q ss_pred CeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHH-hcCCCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLL-SQIRHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.||+|+||.||+|.. .+|+.||+|.+..... .......+..|...+ ...+|+|++++++++...+..++++||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4589999999999966 4688999999875432 122223444555444 455899999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
++|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++..... ..
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~ 151 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NK 151 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----cc
Confidence 99999997654 588999999999999999999999 999999999999999999999999999875432 22
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...++..|+|||.+.+..++.++||||||+++|||++|..||..... ..............+.... ......+.+
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 226 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---DAVFDNILSRRINWPEEVK--EFCSPEAVD 226 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcccCCCCccc--ccCCHHHHH
Confidence 33578899999999888889999999999999999999999864332 2222222222211111111 011234889
Q ss_pred HHhhhcCCCCCCCCCc---cccccCCCCCC
Q 042457 332 IAFACLRSKPKSRPTM---RRSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RPs~---~eil~hp~~~~ 358 (361)
++.+||+.+|++|||+ .|++.||||++
T Consensus 227 ~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~ 256 (260)
T cd05611 227 LINRLLCMDPAKRLGANGYQEIKSHPFFKS 256 (260)
T ss_pred HHHHHccCCHHHccCCCcHHHHHcChHhhc
Confidence 9999999999999965 69999999975
No 307
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-41 Score=306.43 Aligned_cols=256 Identities=26% Similarity=0.405 Sum_probs=199.6
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeC--------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLP--------SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFC 156 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 156 (361)
+..++|.+.+.||+|+||.||++... ++..+|+|.+...... .....+..|+.+++++ +|+||+++++++
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCCh-HHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 33467899999999999999999652 2357999999765332 2246788899999999 799999999999
Q ss_pred eeCCeEEEEEEeccCCChhhhhccCCc-------------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCC
Q 042457 157 LHKKCMFLIYKYMRRGSLFCVLRNDDE-------------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNN 223 (361)
Q Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~N 223 (361)
...+..++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+. +++|+||||+|
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 170 (307)
T cd05098 94 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 170 (307)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHh
Confidence 999999999999999999999975421 12588999999999999999999999 99999999999
Q ss_pred eeeCCCCCeEEeeecCccccCCCCCCc--ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCC
Q 042457 224 ILLNSKLEAFVADFGVARLLHSDSSNR--TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFN 300 (361)
Q Consensus 224 ill~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~ 300 (361)
|+++.++.++|+|||++.......... ....++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-- 248 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-- 248 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--
Confidence 999999999999999987654322111 11224568999999988889999999999999999998 8888764321
Q ss_pred cchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 301 PKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.. ............... .....+.+++.+||+.+|.+|||+.+++++
T Consensus 249 -~~-~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 249 -EE-LFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred -HH-HHHHHHcCCCCCCCC----cCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 11 111222221111111 112247889999999999999999999864
No 308
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.6e-41 Score=297.56 Aligned_cols=252 Identities=25% Similarity=0.446 Sum_probs=201.1
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEE
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 164 (361)
++..++|++.+.||+|+||.||++...++..+|+|.+...... .+.+.+|+.+++.++|+|++++++++.. ...++
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~ 77 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYI 77 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhH---HHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEE
Confidence 3456789999999999999999998878888999988754322 3678899999999999999999999887 77899
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
+|||+++++|.+++..... ..+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+....
T Consensus 78 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 78 ITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 153 (260)
T ss_pred EEEeCCCCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeecc
Confidence 9999999999999976432 2578999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCC-cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhh
Q 042457 245 SDSSN-RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTV 322 (361)
Q Consensus 245 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (361)
..... .....++..|+|||++.+..++.++|+||||+++|++++ |+.||..... ..... ........+...
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~~-~~~~~~~~~~~~--- 226 (260)
T cd05073 154 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN---PEVIR-ALERGYRMPRPE--- 226 (260)
T ss_pred CCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH---HHHHH-HHhCCCCCCCcc---
Confidence 32211 122235677999999988889999999999999999999 9999875432 11111 112221111111
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 323 IQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 323 ~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.....+.+++.+||+.+|++||++.++++
T Consensus 227 -~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 227 -NCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred -cCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 11235889999999999999999998764
No 309
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.3e-41 Score=295.03 Aligned_cols=242 Identities=25% Similarity=0.388 Sum_probs=191.7
Q ss_pred CeeeecCceeEEEEEeCC----CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEecc
Q 042457 95 YCIGTGGYGSVYRAQLPS----GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMR 170 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 170 (361)
++||+|+||.||+|.+.. +..+|+|.+...... ...+.+..|+.+++.++|+|++++++++. .+..+++|||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 369999999999996532 268999998866553 33467889999999999999999999876 456899999999
Q ss_pred CCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCc
Q 042457 171 RGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR 250 (361)
Q Consensus 171 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 250 (361)
+++|.+++.... .+++..+..++.|++.||+|||.. +++|+||||+||+++.++.+||+|||+++.........
T Consensus 79 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 79 LGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 999999997654 589999999999999999999999 99999999999999999999999999998664333221
Q ss_pred c---cccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 251 T---VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 251 ~---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
. ...++..|+|||.+.+..++.++||||||+++||+++ |+.||..... ......+.... ..+.... ..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~~~~~~-~~~~~~~----~~ 224 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAMLESGE-RLPRPEE----CP 224 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHHcCC-cCCCCCC----CC
Confidence 1 1123467999999988889999999999999999998 9999875432 11112221221 1111111 11
Q ss_pred HHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
..+.+++.+||+.+|++|||+.++++
T Consensus 225 ~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 225 QEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 24789999999999999999999875
No 310
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.5e-41 Score=304.52 Aligned_cols=258 Identities=24% Similarity=0.333 Sum_probs=196.5
Q ss_pred hcCCCCcCeeeecCceeEEEEEeCC---------------CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceee
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLPS---------------GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKL 152 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~ 152 (361)
.++|++.+.||+|+||.||++...+ ...||+|.+..... ......+.+|++++++++|+|++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 4678999999999999999986532 23589999875433 2334678899999999999999999
Q ss_pred eEEEeeCCeEEEEEEeccCCChhhhhccCCc---------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCC
Q 042457 153 YGFCLHKKCMFLIYKYMRRGSLFCVLRNDDE---------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNN 223 (361)
Q Consensus 153 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~N 223 (361)
++++...+..++||||+++++|.+++..... ...+++..++.++.|++.||+|||+. +++|+||||+|
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N 159 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRN 159 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhh
Confidence 9999999999999999999999999864321 12468899999999999999999999 99999999999
Q ss_pred eeeCCCCCeEEeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh--CCCCCCCcccC
Q 042457 224 ILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM--GRHPGDLLSSF 299 (361)
Q Consensus 224 ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~~ 299 (361)
|++++++.+||+|||++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 99999999999999998765332211 112234678999999988889999999999999999998 56677644321
Q ss_pred CcchhHhhhhcc--cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 300 NPKIMLIDLLDQ--RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 300 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
............ ......... .....+.+++.+||+.||++|||+++|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 240 QVIENTGEFFRNQGRQIYLSQTP---LCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHhhhhccccccCCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 110001111110 000000000 01125889999999999999999999865
No 311
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5.4e-41 Score=299.32 Aligned_cols=255 Identities=27% Similarity=0.415 Sum_probs=195.5
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-----CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--C
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-----PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--K 160 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~ 160 (361)
.++|++.+.||+|+||.||++.. .++..||+|.+..... ...+.+..|+++++.++||||+++++++... .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH--HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 35688889999999999999974 2578999999875543 2346788999999999999999999987643 4
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
..++|+||+++++|.+++..... .+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccc
Confidence 68999999999999999975432 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCc---ccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCC-----c----c---hhH
Q 042457 241 RLLHSDSSNR---TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFN-----P----K---IML 305 (361)
Q Consensus 241 ~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-----~----~---~~~ 305 (361)
.......... ....++..|+|||.+.+..++.++||||||+++|||++|..++....... . . ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 8764332211 11223456999999988889999999999999999999877654222100 0 0 001
Q ss_pred hhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 306 IDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.+........+... .....+.+++.+||+.+|++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 236 IELLKNNGRLPAPP----GCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred HHHHhcCCcCCCCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 11111111111111 111248899999999999999999998753
No 312
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.1e-41 Score=305.23 Aligned_cols=255 Identities=25% Similarity=0.414 Sum_probs=199.4
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEeC--------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEE
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQLP--------SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGF 155 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 155 (361)
....++|.+.+.||+|+||.||+++.. .+..+|+|.++..... .....+..|+.+++.+ +||||++++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATD-KDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCCh-HHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 344567888999999999999999642 2457999998754432 3356788999999999 69999999999
Q ss_pred EeeCCeEEEEEEeccCCChhhhhccCCc-------------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCC
Q 042457 156 CLHKKCMFLIYKYMRRGSLFCVLRNDDE-------------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSN 222 (361)
Q Consensus 156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~ 222 (361)
+...+..+++|||+++|+|.+++..... ...+++.++..++.|++.||.|||++ +++|+||||+
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~ 163 (314)
T cd05099 87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAAR 163 (314)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccce
Confidence 9999999999999999999999965321 23589999999999999999999999 9999999999
Q ss_pred CeeeCCCCCeEEeeecCccccCCCCCCc--ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccC
Q 042457 223 NILLNSKLEAFVADFGVARLLHSDSSNR--TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSF 299 (361)
Q Consensus 223 Nill~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~ 299 (361)
||++++++.+||+|||+++......... ....++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~- 242 (314)
T cd05099 164 NVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV- 242 (314)
T ss_pred eEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-
Confidence 9999999999999999997654322111 11223457999999988889999999999999999999 8899864332
Q ss_pred CcchhHhhhhcccC-CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 300 NPKIMLIDLLDQRA-PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 300 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
............ ..+.. ....+.+++.+||+.||++|||+.|+++
T Consensus 243 --~~~~~~~~~~~~~~~~~~------~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 243 --EELFKLLREGHRMDKPSN------CTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred --HHHHHHHHcCCCCCCCCC------CCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 111222222211 11111 1124778999999999999999999885
No 313
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.2e-41 Score=300.64 Aligned_cols=254 Identities=28% Similarity=0.445 Sum_probs=200.6
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK 160 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 160 (361)
..++|++.+.||+|+||.||++... ++..||+|.+...... .....+..|+.++++++|||++++++++...+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA-DMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCH-HHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 4567899999999999999999753 4678999998755432 23467889999999999999999999999999
Q ss_pred eEEEEEEeccCCChhhhhccCC-------------------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCC
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDD-------------------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISS 221 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~ 221 (361)
..++++||+++++|.+++.... ....+++..++.++.|++.||+|||+. +++|+||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 9999999999999999986421 112478889999999999999999999 999999999
Q ss_pred CCeeeCCCCCeEEeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCccc
Q 042457 222 NNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSS 298 (361)
Q Consensus 222 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~ 298 (361)
+||++++++.++|+|||++......... ......+..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999998765332211 112234567999999988889999999999999999998 8888754332
Q ss_pred CCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 299 FNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
......+....... ... .....+.+++.+||+.||++|||+.|+++
T Consensus 239 ---~~~~~~~~~~~~~~-~~~----~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 239 ---EEVIYYVRDGNVLS-CPD----NCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred ---HHHHHHHhcCCCCC-CCC----CCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 12222222222211 111 11235889999999999999999999874
No 314
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.8e-41 Score=299.59 Aligned_cols=237 Identities=23% Similarity=0.349 Sum_probs=184.9
Q ss_pred eeeecCceeEEEEEeCC-------------------------CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcce
Q 042457 96 CIGTGGYGSVYRAQLPS-------------------------GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIV 150 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 150 (361)
.||+|+||.||+|.+.. ...|++|.+..... .....+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR--DIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH--HHHHHHHHHHHHHhcCCCCCee
Confidence 59999999999996421 13589998865433 2346788899999999999999
Q ss_pred eeeEEEeeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC
Q 042457 151 KLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL 230 (361)
Q Consensus 151 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~ 230 (361)
+++++|......++||||+++|+|..++..... .+++..+..++.|++.||+|||+. +++||||||+|||++.++
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLG 154 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccC
Confidence 999999999999999999999999999875432 578899999999999999999999 999999999999997643
Q ss_pred -------CeEEeeecCccccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHH-hCCCCCCCcccCCc
Q 042457 231 -------EAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVL-MGRHPGDLLSSFNP 301 (361)
Q Consensus 231 -------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~-tg~~p~~~~~~~~~ 301 (361)
.++++|||++...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||........
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 230 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK 230 (274)
T ss_pred cccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence 3799999987543222 12246778999998865 56889999999999999985 69999875432111
Q ss_pred chhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 302 KIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
..........+.... ..+.+++.+||+.+|++|||+.+++++
T Consensus 231 ----~~~~~~~~~~~~~~~------~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 231 ----ERFYEKKHRLPEPSC------KELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred ----HHHHHhccCCCCCCC------hHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 112222211111111 147889999999999999999999875
No 315
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.4e-41 Score=294.89 Aligned_cols=245 Identities=25% Similarity=0.410 Sum_probs=196.0
Q ss_pred CeeeecCceeEEEEEeCC--CC--EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEecc
Q 042457 95 YCIGTGGYGSVYRAQLPS--GK--IVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMR 170 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 170 (361)
+.||+|++|.||+|.+.+ ++ .||+|.+...... ...+.+..|+..+++++|+||+++++.+.. ...++++||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 358999999999997643 33 6999999876654 446789999999999999999999999988 88999999999
Q ss_pred CCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC-
Q 042457 171 RGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN- 249 (361)
Q Consensus 171 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~- 249 (361)
+++|.+++..... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.........
T Consensus 79 ~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 79 LGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 9999999976543 3689999999999999999999999 9999999999999999999999999999876442221
Q ss_pred --cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 250 --RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 250 --~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+........... ...
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~----~~~ 227 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ---ILKKIDKEGERLERPE----ACP 227 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHhcCCcCCCCc----cCC
Confidence 112346778999999988889999999999999999999 999986443211 1111111111111111 112
Q ss_pred HHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
..+.+++.+||+.+|++|||+.++++
T Consensus 228 ~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 228 QDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 35889999999999999999999875
No 316
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.3e-41 Score=295.92 Aligned_cols=251 Identities=29% Similarity=0.436 Sum_probs=199.4
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CC---CEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SG---KIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
.++|...+.||+|+||.||+|... ++ ..+++|.+...... ...+.+..|++++++++|+|++++.+++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTE-KQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCH-HHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 457888899999999999999764 23 37999998755332 22467889999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
+||||+++++|.+++..... .+++.++..++.|++.|++|||+. +++|+||||+||++++++.++|+|||++...
T Consensus 83 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 83 IITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence 99999999999999875432 589999999999999999999999 9999999999999999999999999998766
Q ss_pred CCCCCCc---ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 244 HSDSSNR---TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 244 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
....... .....+..|+|||++.+..++.++||||||+++||+++ |+.||..... ......+.... ..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---~~~~~~i~~~~-~~~~~~ 233 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---HEVMKAINDGF-RLPAPM 233 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHHHhcCC-CCCCCC
Confidence 4322211 11123457999999988889999999999999999998 9999865432 12222222221 111111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.....+.+++.+||+.+|++||++.++++
T Consensus 234 ----~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 234 ----DCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred ----CCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 11234789999999999999999999875
No 317
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.7e-41 Score=309.86 Aligned_cols=263 Identities=28% Similarity=0.410 Sum_probs=200.8
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeC--CeE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHK--KCM 162 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~ 162 (361)
..++|.+.+.||+|+||.||+|... +|+.+|+|++............+..|+.+++++ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3567888899999999999999765 688999998865433223345677899999999 999999999998754 368
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999997 5898888654 578899999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCC-----Ccccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhh---------
Q 042457 243 LHSDSS-----NRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLID--------- 307 (361)
Q Consensus 243 ~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------- 307 (361)
...... ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||......+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 643321 1223457889999998754 5578899999999999999999999865432111000000
Q ss_pred -----------hhcc---cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 308 -----------LLDQ---RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 308 -----------~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.... ....+.. .........+.+++.+||+.||++|||+.++++||||++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~ 300 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLD-ELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchh-hhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence 0000 0000000 000001235789999999999999999999999999975
No 318
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.7e-41 Score=297.33 Aligned_cols=247 Identities=23% Similarity=0.310 Sum_probs=186.0
Q ss_pred eeeecCceeEEEEEeCC---CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCC
Q 042457 96 CIGTGGYGSVYRAQLPS---GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
.||+|+||.||+|...+ ...+++|.+..... ......+.+|+..++.++|+||+++++.+......++||||+++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT-PDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCC-hHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 58999999999996543 34688888765433 233467889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCc--cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC--
Q 042457 173 SLFCVLRNDDE--AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS-- 248 (361)
Q Consensus 173 ~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 248 (361)
+|.+++..... ....++.....++.|++.|++|||+. +++||||||+||++++++.+||+|||++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 99999976432 22356788899999999999999999 999999999999999999999999999865432221
Q ss_pred Cccccccccccccccccc-------ccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhccc---CCCCC
Q 042457 249 NRTVVAGTHGYIAPELAY-------TMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQR---APSPI 317 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 317 (361)
......++..|+|||+.. ...++.++||||||+++|||++ |..||...... .......... .+.+.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE---QVLKQVVREQDIKLPKPQ 234 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH---HHHHHHhhccCccCCCCc
Confidence 112233567899999864 3456789999999999999999 78887654321 1122222221 11111
Q ss_pred CChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 318 DDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
... .....+.+++..|| .||++|||+++|++-
T Consensus 235 ~~~---~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 235 LDL---KYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred ccc---cCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 111 11123567778888 599999999998753
No 319
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=7.8e-41 Score=292.50 Aligned_cols=245 Identities=27% Similarity=0.358 Sum_probs=203.2
Q ss_pred eeecCceeEEEEEeC-CCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCCh
Q 042457 97 IGTGGYGSVYRAQLP-SGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 97 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 174 (361)
||+|+||.||++... +++.+++|.+...... ......+..|+.+++.++|+|++++++.+..++..+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999765 5889999998765432 22356788999999999999999999999999999999999999999
Q ss_pred hhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCccccc
Q 042457 175 FCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254 (361)
Q Consensus 175 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 254 (361)
.+++.... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++..............
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 99997654 589999999999999999999998 999999999999999999999999999977654433334456
Q ss_pred ccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHh
Q 042457 255 GTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAF 334 (361)
Q Consensus 255 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 334 (361)
++..|+|||...+...+.++|+||||+++|++++|+.||..... ......+.......+... ...+.+++.
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~------~~~l~~~i~ 225 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKILKDPLRFPEFL------SPEARDLIS 225 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHhcCCCCCCCCC------CHHHHHHHH
Confidence 78899999999888889999999999999999999999865432 222223333222222221 124788999
Q ss_pred hhcCCCCCCCCCc---cccccCCCC
Q 042457 335 ACLRSKPKSRPTM---RRSFPNPEI 356 (361)
Q Consensus 335 ~cl~~dP~~RPs~---~eil~hp~~ 356 (361)
+||..||++|||+ +++++||||
T Consensus 226 ~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 226 GLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHhcCCHhhCCCcccHHHHHhCCCC
Confidence 9999999999999 899999998
No 320
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.1e-41 Score=303.33 Aligned_cols=260 Identities=25% Similarity=0.321 Sum_probs=203.0
Q ss_pred CCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEec
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
|+..+.||+|++|.||+|... +++.+|+|.+..........+.+..|+.+++.++|+|++++++++...+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456778999999999999765 5899999999876433333467788999999999999999999999999999999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 249 (361)
+ ++|.+++.... ..+++..+..++.+++.||+|||+. +++|+||+|+||++++++.++|+|||.+.........
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCccc
Confidence 7 58999997653 2589999999999999999999999 9999999999999999999999999999776543333
Q ss_pred ccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhh-----------------cc
Q 042457 250 RTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLL-----------------DQ 311 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-----------------~~ 311 (361)
.....++..|+|||.+.+. .++.++||||||+++||+++|+.||................ +.
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 3334457789999988766 78999999999999999999999986543211100000000 00
Q ss_pred cCCCCCCChh---hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 312 RAPSPIDDQT---VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 312 ~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
..+....... .......+.+++.+||+.||++||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 0000000000 00112358899999999999999999999999998
No 321
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.2e-41 Score=303.75 Aligned_cols=257 Identities=24% Similarity=0.376 Sum_probs=201.1
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEe--------CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEE
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQL--------PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGF 155 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 155 (361)
.+...+|.+.+.||+|+||.||+++. .++..||+|.+..... ....+.+.+|+.+++.+ +||||++++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 34567788899999999999999964 1345799999875433 23356788999999999 89999999999
Q ss_pred EeeCCeEEEEEEeccCCChhhhhccCCc-------------cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCC
Q 042457 156 CLHKKCMFLIYKYMRRGSLFCVLRNDDE-------------AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSN 222 (361)
Q Consensus 156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~ 222 (361)
+...+..+++|||+++++|.+++..... ...+++.++..++.|++.||.|||+. +++|+||||+
T Consensus 90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 166 (304)
T cd05101 90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAAR 166 (304)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccc
Confidence 9999999999999999999999875321 23578899999999999999999999 9999999999
Q ss_pred CeeeCCCCCeEEeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccC
Q 042457 223 NILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSF 299 (361)
Q Consensus 223 Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~ 299 (361)
||++++++.+||+|||+++........ .....++..|+|||.+.+..++.++||||||+++||+++ |..||.....
T Consensus 167 Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~- 245 (304)
T cd05101 167 NVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV- 245 (304)
T ss_pred eEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-
Confidence 999999999999999999866432221 122235678999999988889999999999999999998 7888754322
Q ss_pred CcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 300 NPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
......+...... .... .....+.+++.+||+.+|.+|||+.|+++.
T Consensus 246 --~~~~~~~~~~~~~-~~~~----~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 246 --EELFKLLKEGHRM-DKPA----NCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred --HHHHHHHHcCCcC-CCCC----CCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 1112222221111 1111 112358889999999999999999999864
No 322
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=9.4e-41 Score=294.63 Aligned_cols=254 Identities=23% Similarity=0.335 Sum_probs=201.9
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCc---chHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--CeE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSE---TELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KCM 162 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 162 (361)
.+|++.+.||+|+||.||+|.. .+++.||+|.+.... ........+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4788999999999999999965 468999999875322 1233456788999999999999999999998764 468
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++++||+++++|.+++.... .+++.....++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999987644 478899999999999999999999 999999999999999999999999999976
Q ss_pred cCCCC---CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 243 LHSDS---SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 243 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
..... .......++..|+|||.+.+..++.++|+||||+++|+|++|+.||..... .................
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~p- 231 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA---MAAIFKIATQPTKPMLP- 231 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH---HHHHHHHHcCCCCCCCC-
Confidence 53321 112234578899999999888889999999999999999999999875422 11122222211111111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
......+.+++.+||+ +|.+|||+.+++.|||.
T Consensus 232 ---~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 232 ---DGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ---cccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 1112248899999999 57999999999999985
No 323
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=8.5e-41 Score=299.87 Aligned_cols=260 Identities=22% Similarity=0.357 Sum_probs=199.8
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeCC-CCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLPS-GKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 164 (361)
.-++|.+.+.||+|+||.||+|...+ ++.||||.++....... ...+..|+..+.+. +|+||+++++++......++
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEE-NKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHH-HHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 34568888999999999999998864 89999999976543322 34566677766666 59999999999999999999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
+|||+. +++.+++..... .+++..+..++.|++.||+|||+.. +++|+||+|+||++++++.++|+|||++..+.
T Consensus 92 v~e~~~-~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 92 CMELMS-TCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred EeeccC-cCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 999985 477766654332 6899999999999999999999732 89999999999999999999999999987654
Q ss_pred CCCCCcccccccccccccccccccc----cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCCh
Q 042457 245 SDSSNRTVVAGTHGYIAPELAYTMV----VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQ 320 (361)
Q Consensus 245 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (361)
.... .....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||..... .............+......
T Consensus 167 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 243 (296)
T cd06618 167 DSKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT--EFEVLTKILQEEPPSLPPNE 243 (296)
T ss_pred CCCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh--HHHHHHHHhcCCCCCCCCCC
Confidence 3222 22234778899999886553 78899999999999999999999864321 11122222322221111110
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.....+.+++.+||+.||++|||++++++||||+.
T Consensus 244 ---~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 244 ---GFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred ---CCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 11224889999999999999999999999999975
No 324
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.4e-41 Score=306.85 Aligned_cols=263 Identities=25% Similarity=0.355 Sum_probs=196.8
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC------
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK------ 160 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 160 (361)
.++|.+.+.||+|+||.||+|... +++.+|+|++............+.+|+++++.++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999764 6889999998654332222345678999999999999999999875433
Q ss_pred --eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 161 --CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 161 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
..++|+||+.+ ++...+.... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.++|+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCc
Confidence 46999999965 6666665432 2589999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCC-----------cccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHh
Q 042457 239 VARLLHSDSSN-----------RTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLI 306 (361)
Q Consensus 239 ~~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 306 (361)
++......... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99765432211 112346788999998765 457889999999999999999999987544321111111
Q ss_pred hhhcccC------------------CCCCCCh---hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 307 DLLDQRA------------------PSPIDDQ---TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 307 ~~~~~~~------------------~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
....... ....... ........+.+++.+||+.||++|||+.|+++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 1100000 0000000 000111347899999999999999999999999998
No 325
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=7.7e-41 Score=293.48 Aligned_cols=254 Identities=23% Similarity=0.328 Sum_probs=208.2
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|++.+.||+|+||.||++... +++.+++|.+............+..|+.+++.++|+||+++++++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999654 678999999876554444456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 169 MRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 169 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
+++++|.+++.... ....+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99999999886622 123689999999999999999999999 9999999999999999999999999999776543
Q ss_pred CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 248 SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
......++..|+|||.+.+..++.++|+||||+++|||++|+.||..... ......+.....+.. . .....
T Consensus 157 -~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~-~----~~~~~ 227 (256)
T cd08530 157 -MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM---QDLRYKVQRGKYPPI-P----PIYSQ 227 (256)
T ss_pred -CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCCCCC-c----hhhCH
Confidence 22234578899999999888899999999999999999999999875432 111222222222211 1 12223
Q ss_pred HHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
.+.+++.+||+.+|++|||+.++++||++
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 228 DLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 58899999999999999999999999985
No 326
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.3e-41 Score=308.03 Aligned_cols=267 Identities=23% Similarity=0.321 Sum_probs=203.7
Q ss_pred HHHHHHHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC
Q 042457 81 FEEIIVATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK 159 (361)
Q Consensus 81 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 159 (361)
..++...+++|.+.+.||+|+||.||+|.. .+|+.||+|++..........+.+.+|+.++++++|+||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 455666789999999999999999999964 5789999999876543333346678899999999999999999988643
Q ss_pred ------CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeE
Q 042457 160 ------KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAF 233 (361)
Q Consensus 160 ------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~k 233 (361)
...+++++++ +++|.+++... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEE
Confidence 3467888876 78998887643 489999999999999999999999 999999999999999999999
Q ss_pred EeeecCccccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhh---
Q 042457 234 VADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLL--- 309 (361)
Q Consensus 234 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--- 309 (361)
|+|||++...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||................
T Consensus 161 l~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (345)
T cd07877 161 ILDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 237 (345)
T ss_pred Eeccccccccccc---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9999998764322 223457889999998765 567889999999999999999999986433211000000000
Q ss_pred -----------------cc--cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 310 -----------------DQ--RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 310 -----------------~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.. ..+..............+.+++.+|++.||.+|||+.++++||||++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 238 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305 (345)
T ss_pred CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence 00 00000000000001124789999999999999999999999999985
No 327
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.2e-41 Score=297.03 Aligned_cols=250 Identities=30% Similarity=0.482 Sum_probs=198.0
Q ss_pred cCCCCcCeeeecCceeEEEEEeCC-C---CEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLPS-G---KIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 164 (361)
.+|++.+.||+|+||.||+|.... + ..||+|.+..... ......|..|+.+++.++||||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 347788999999999999997643 3 3699999876533 2335789999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
||||+++++|.+++..... .+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus 83 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 83 ITEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 9999999999999876432 589999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCCCcc---ccc--ccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcc-cCCCCC
Q 042457 245 SDSSNRT---VVA--GTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQ-RAPSPI 317 (361)
Q Consensus 245 ~~~~~~~---~~~--gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~ 317 (361)
....... ... .+..|+|||.+.+..++.++||||||+++||+++ |..||...... .....+... ..+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~~~~~~~~~~ 234 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIEQDYRLPPPM 234 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHHcCCcCCCcc
Confidence 3222111 111 2357999999998889999999999999999887 99998654321 111222111 112221
Q ss_pred CChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 318 DDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.. ...+.+++.+||+.+|.+||+++++++.
T Consensus 235 ~~------~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 235 DC------PTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred cC------CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11 2247889999999999999999998753
No 328
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.4e-41 Score=294.76 Aligned_cols=245 Identities=25% Similarity=0.400 Sum_probs=195.2
Q ss_pred hcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee-CCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH-KKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~ 166 (361)
..+|.+.+.||+|+||.||++.. .|..||+|..+.... .+.+..|+.++++++|+|++++++++.. .+..++++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCch----HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 35788899999999999999987 578899999865432 3568899999999999999999997654 56789999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+++++|.+++..... ..+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||++......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 80 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred ECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999876442 2488999999999999999999999 9999999999999999999999999998754332
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
. ....++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... ....... ..
T Consensus 156 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~~~-~~~~~~~----~~ 224 (256)
T cd05082 156 Q---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVEKG-YKMDAPD----GC 224 (256)
T ss_pred C---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhcC-CCCCCCC----CC
Confidence 2 12234568999999988889999999999999999998 9999764321 1111111111 1111111 11
Q ss_pred HHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
...+.+++.+||+.+|++|||+.++++
T Consensus 225 ~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 225 PPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 224788999999999999999999875
No 329
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.1e-40 Score=297.41 Aligned_cols=255 Identities=22% Similarity=0.356 Sum_probs=196.9
Q ss_pred cCCCCcCeeeecCceeEEEEEe-----CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--Ce
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-----PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--KC 161 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~ 161 (361)
+.|.+.+.||+|+||.||++.+ .++..||+|.++.... ......+.+|+.+++.++|+|++++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 4578889999999999999974 3578899999875543 23356789999999999999999999999875 56
Q ss_pred EEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
.++||||+++++|.+++..... .+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++|+|||+++
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 8999999999999999865432 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---cccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccC--------Ccc---hhHhh
Q 042457 242 LLHSDSSN---RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSF--------NPK---IMLID 307 (361)
Q Consensus 242 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~--------~~~---~~~~~ 307 (361)
.+...... .....++..|+|||.+.+..++.++||||||+++|||++++.|+...... ... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 66433221 12234667899999988888999999999999999999987764321100 000 00111
Q ss_pred hhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 308 LLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
........+.... ....+.+++.+||+.||++|||+++++++
T Consensus 238 ~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 238 VLEEGKRLPRPPN----CPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHHcCccCCCCCC----CCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 1111111111111 12358899999999999999999999864
No 330
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=4.1e-41 Score=307.19 Aligned_cols=264 Identities=24% Similarity=0.270 Sum_probs=199.3
Q ss_pred cCCC-CcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHH------------HHHHHHHHHHHHhcCCCCcceeeeE
Q 042457 89 EDFD-IKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELA------------FLESFQTEARLLSQIRHRNIVKLYG 154 (361)
Q Consensus 89 ~~~~-~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~------------~~~~~~~e~~~l~~l~h~niv~~~~ 154 (361)
++|. +.+.||+|+||.||+|... +++.||+|.+........ ....+.+|+++++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4454 3467999999999999754 689999999865432210 0124678999999999999999999
Q ss_pred EEeeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEE
Q 042457 155 FCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFV 234 (361)
Q Consensus 155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl 234 (361)
++...+..+++|||+. ++|.+++.... .+++.....++.|++.||+|||+. +++|+||+|+||+++.++.++|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence 9999999999999996 68988886543 588999999999999999999999 9999999999999999999999
Q ss_pred eeecCccccCCC--------------CCCccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccC
Q 042457 235 ADFGVARLLHSD--------------SSNRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSF 299 (361)
Q Consensus 235 ~Dfg~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 299 (361)
+|||++...... ........++..|+|||.+.+. .++.++|+||||+++|||++|+.||......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999998765411 1111223467789999988764 4688999999999999999999998754432
Q ss_pred CcchhHhhhhcccCCC------------------CCCC-hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 300 NPKIMLIDLLDQRAPS------------------PIDD-QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 300 ~~~~~~~~~~~~~~~~------------------~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
................ +... .........+.+++.+||+.+|++|||++|++.||||+..
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 1111111111100000 0000 0000112357899999999999999999999999999874
No 331
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2e-40 Score=300.25 Aligned_cols=253 Identities=25% Similarity=0.368 Sum_probs=200.4
Q ss_pred cCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
+.|...+.||+|+||.||++.. .++..||+|.+..... .......+..|++.++.++|+|++++++++...+..++||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 3467788899999999999975 4688999999875432 2233467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+.+ +|.+.+..... .+++.++..++.+++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 105 e~~~g-~l~~~~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 105 EYCLG-SASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred eCCCC-CHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 99974 77777654322 589999999999999999999999 9999999999999999999999999988654322
Q ss_pred CCCccccccccccccccccc---ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhH
Q 042457 247 SSNRTVVAGTHGYIAPELAY---TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVI 323 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
....++..|+|||.+. ...++.++||||||+++|||++|+.||..... ......+.....+.....
T Consensus 179 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~---- 247 (317)
T cd06635 179 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIAQNESPTLQSN---- 247 (317)
T ss_pred ----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHHhccCCCCCCc----
Confidence 2235788999999873 45688899999999999999999999764321 122222222222111111
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.....+.+++.+||+.+|.+|||+.++++|+|+..
T Consensus 248 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 248 EWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred cccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 11124789999999999999999999999999855
No 332
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.1e-40 Score=291.77 Aligned_cols=244 Identities=24% Similarity=0.399 Sum_probs=195.7
Q ss_pred CeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCCh
Q 042457 95 YCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 174 (361)
+.||+|+||.||++...+++.|++|.+...... .....+.+|++++++++|+||+++++++......++|+||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 358999999999998877999999998765543 3357789999999999999999999999999999999999999999
Q ss_pred hhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCc--cc
Q 042457 175 FCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR--TV 252 (361)
Q Consensus 175 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~--~~ 252 (361)
.+++..... .+++..+..++.+++.+++|||++ +++|+||+|+||+++.++.++|+|||++.......... ..
T Consensus 80 ~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 80 LTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 999876432 578999999999999999999999 99999999999999999999999999987654222111 11
Q ss_pred ccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 253 VAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 253 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
...+..|+|||.+.+..++.++|+||||+++|||+| |..||...... . ...........+... .....+.+
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~---~-~~~~~~~~~~~~~~~----~~~~~~~~ 226 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ---Q-TRERIESGYRMPAPQ----LCPEEIYR 226 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH---H-HHHHHhcCCCCCCCc----cCCHHHHH
Confidence 223567999999988889999999999999999999 88887654321 1 111111111111110 11235889
Q ss_pred HHhhhcCCCCCCCCCcccccc
Q 042457 332 IAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 332 li~~cl~~dP~~RPs~~eil~ 352 (361)
++.+||+.+|.+|||+.|+++
T Consensus 227 li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 227 LMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred HHHHHhccChhhCcCHHHHHH
Confidence 999999999999999999986
No 333
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.9e-41 Score=308.06 Aligned_cols=256 Identities=25% Similarity=0.352 Sum_probs=196.7
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC------
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK------ 160 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 160 (361)
..+|...+.||+|+||.||+|.. .+|+.||+|++............+.+|+.+++.++|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 46899999999999999999975 46899999998754333333456789999999999999999999987542
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
..++|+||+.. +|..+... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMGH-----PLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEeccccc-CHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 46999999864 67665421 478999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc---------
Q 042457 241 RLLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD--------- 310 (361)
Q Consensus 241 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~--------- 310 (361)
...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ....+..
T Consensus 165 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~ 238 (342)
T cd07879 165 RHADAE---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGPEF 238 (342)
T ss_pred cCCCCC---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHHH
Confidence 754321 223457888999998765 468889999999999999999999997543211 0110000
Q ss_pred --------------ccCCCCCCChhh--HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 311 --------------QRAPSPIDDQTV--IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 311 --------------~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.....+...... ......+.+++.+||+.||++|||+.+++.||||+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~ 302 (342)
T cd07879 239 VQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDS 302 (342)
T ss_pred HHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhh
Confidence 000000000000 001124779999999999999999999999999976
No 334
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.2e-41 Score=306.32 Aligned_cols=258 Identities=24% Similarity=0.381 Sum_probs=201.2
Q ss_pred HHHHhcCCCCcCeeeecCceeEEEEEeC--------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeE
Q 042457 84 IIVATEDFDIKYCIGTGGYGSVYRAQLP--------SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYG 154 (361)
Q Consensus 84 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~ 154 (361)
+++...+|.+.+.||+|+||.||++... .+..||+|.+...... ...+.+..|+.+++++ +|+||+++++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATD-KDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCH-HHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 3445567899999999999999999642 1236899988754332 3357788999999999 7999999999
Q ss_pred EEeeCCeEEEEEEeccCCChhhhhccCC-------------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCC
Q 042457 155 FCLHKKCMFLIYKYMRRGSLFCVLRNDD-------------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISS 221 (361)
Q Consensus 155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~ 221 (361)
+|...+..++++||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +++|+||||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp 162 (334)
T cd05100 86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAA 162 (334)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceecccccc
Confidence 9999999999999999999999987532 123588999999999999999999999 999999999
Q ss_pred CCeeeCCCCCeEEeeecCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCccc
Q 042457 222 NNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSS 298 (361)
Q Consensus 222 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~ 298 (361)
+||++++++.+||+|||+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred ceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999999999765432211 111224567999999999889999999999999999998 8888764332
Q ss_pred CCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 299 FNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
......+...... .... .....+.+++.+||+.+|++|||+.|++++
T Consensus 243 ---~~~~~~~~~~~~~-~~~~----~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 243 ---EELFKLLKEGHRM-DKPA----NCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred ---HHHHHHHHcCCCC-CCCC----CCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 1122222222111 1111 111247899999999999999999999865
No 335
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=298.83 Aligned_cols=262 Identities=23% Similarity=0.275 Sum_probs=212.6
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchH-HHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETEL-AFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
+..+.|+.-+.||+|+||.||-++. .+|+.+|.|.+....... ......+.|-.+|.+++.+.||.+--.+...+.+|
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 3456788889999999999999955 479999999886543211 11245678999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
+|+..|.||+|.-+|.+.+. ..+++..++.++.+|+.||.+||.+ +||.|||||+|||+|+.|+++|+|+|+|..+
T Consensus 262 lVLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEec
Confidence 99999999999999987664 3589999999999999999999999 9999999999999999999999999999988
Q ss_pred CCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhH-hhhhcccCCCCCCChhh
Q 042457 244 HSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIML-IDLLDQRAPSPIDDQTV 322 (361)
Q Consensus 244 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 322 (361)
........ .+||.+|||||++.++.|+...|.||+||++|||+.|+.||.....-.....+ ..+.......+..
T Consensus 338 ~~g~~~~~-rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~k---- 412 (591)
T KOG0986|consen 338 PEGKPIRG-RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDK---- 412 (591)
T ss_pred CCCCcccc-ccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccc----
Confidence 65544333 37999999999999999999999999999999999999999765543333222 2222221111111
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 323 IQDIILVSKIAFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 323 ~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
-.....++....|++||++|. .++++-+||||+.
T Consensus 413 --FS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ 451 (591)
T KOG0986|consen 413 --FSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD 451 (591)
T ss_pred --cCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence 112467778889999999997 5568999999986
No 336
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.1e-40 Score=297.16 Aligned_cols=259 Identities=24% Similarity=0.367 Sum_probs=198.5
Q ss_pred CCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeCCeEEEEEEe
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
|.+.+.||+|++|+||+|... +++.|++|++........ .....+|+..+++++ |+|++++++++...+..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE-ECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchh-HHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 567788999999999999875 578899999875543221 233457899999998 99999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+ +++|.+++..... ..+++..+..++.|++.+|.|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 80 ~-~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 80 M-EGNLYQLMKDRKG-KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred C-CCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence 9 8899888876542 2589999999999999999999999 999999999999999999999999999976643222
Q ss_pred Cccccccccccccccccc-ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc----------------
Q 042457 249 NRTVVAGTHGYIAPELAY-TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ---------------- 311 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~---------------- 311 (361)
.....++..|+|||.+. +..++.++|+||||+++|||++|+.||......+...........
T Consensus 155 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 155 -YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred -cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 22345788899999875 455789999999999999999999998654321111100000000
Q ss_pred --cCCCCCCC--h-hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 312 --RAPSPIDD--Q-TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 312 --~~~~~~~~--~-~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
..+..... . ........+.+++.+||+.||++|||++|++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00000000 0 000112358899999999999999999999999997
No 337
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.6e-40 Score=296.83 Aligned_cols=257 Identities=25% Similarity=0.358 Sum_probs=202.3
Q ss_pred CCCCcCeeeecCceeEEEEEe----CCCCEEEEEEeccCcc--hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQL----PSGKIVALKKLHHSET--ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 162 (361)
+|.+.+.||+|++|.||++.. .+++.||||.++.... .....+.+..|+.++.++ +|+||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 467788999999999999864 3578899999875422 122345678999999999 599999999999999999
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++||||+++++|.+++.... .+++..+..++.|+++||.|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 99999999999999987543 588999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCCCC-cccccccccccccccccccc--cCccchhhhHHHHHHHHHhCCCCCCCcccCCc-chhHhhhhcccCCCCCC
Q 042457 243 LHSDSSN-RTVVAGTHGYIAPELAYTMV--VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNP-KIMLIDLLDQRAPSPID 318 (361)
Q Consensus 243 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 318 (361)
....... .....++..|+|||.+.+.. .+.++||||||+++|||++|..||........ ............+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKT 234 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcc
Confidence 5433221 22345788999999987655 78899999999999999999999864322111 11112222222222211
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCCCCCc---cccccCCCCCC
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKSRPTM---RRSFPNPEINP 358 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~---~eil~hp~~~~ 358 (361)
. ...+.+++.+||+.||++|||+ .++++||||+.
T Consensus 235 ~------~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~ 271 (288)
T cd05583 235 M------SAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQG 271 (288)
T ss_pred c------CHHHHHHHHHHhcCCHhhccCcchHHHHhcCccccc
Confidence 1 1247889999999999999995 56699999976
No 338
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.7e-40 Score=297.29 Aligned_cols=252 Identities=25% Similarity=0.363 Sum_probs=198.6
Q ss_pred CCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 91 FDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
|...+.||+|+||.||+|.. .+|+.|++|.+..... .......+..|+++++.++|+|++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55567799999999999975 4688999999865432 223346788899999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+. +++.+++..... .+++.++..++.|++.++.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~~--~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 96 577777654332 589999999999999999999999 999999999999999999999999998864321
Q ss_pred Cccccccccccccccccc---ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 249 NRTVVAGTHGYIAPELAY---TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
.....++..|+|||.+. ...++.++||||||+++|||++|..||..... ............+...... .
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~----~ 245 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIAQNDSPTLQSNE----W 245 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhcCCCCCCccc----c
Confidence 22345788999999874 45678899999999999999999999765432 1111222222111111100 1
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
...+.+++.+||+.+|.+||++.+++.||||+..
T Consensus 246 ~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 246 TDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 1247889999999999999999999999999763
No 339
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.5e-40 Score=294.31 Aligned_cols=243 Identities=26% Similarity=0.433 Sum_probs=188.8
Q ss_pred eeeecCceeEEEEEeCC-CC--EEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 96 CIGTGGYGSVYRAQLPS-GK--IVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
.||+|+||.||+|...+ +. .+++|.+..... ....+.+..|+++++++ +||||+++++++...+..+++|||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC-HHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 58999999999997753 43 468888874332 22246788999999999 799999999999999999999999999
Q ss_pred CChhhhhccCC-------------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 172 GSLFCVLRNDD-------------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 172 g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
++|.+++.... ....+++.++..++.|++.|++|||+. +++|+||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 99999986532 122478999999999999999999998 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcc-cCCCC
Q 042457 239 VARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQ-RAPSP 316 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~-~~~~~ 316 (361)
++....... .......+..|+|||++.+..++.++||||||+++|||++ |..||..... .......... ....+
T Consensus 158 l~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---~~~~~~~~~~~~~~~~ 233 (270)
T cd05047 158 LSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AELYEKLPQGYRLEKP 233 (270)
T ss_pred Cccccchhh-hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH---HHHHHHHhCCCCCCCC
Confidence 985322111 1111223567999999988889999999999999999997 9999864332 1111112111 11111
Q ss_pred CCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 317 IDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.. ....+.+++.+||+.||.+|||+.++++
T Consensus 234 ~~------~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 234 LN------CDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred Cc------CCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 11 1124789999999999999999999875
No 340
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=284.65 Aligned_cols=259 Identities=24% Similarity=0.345 Sum_probs=209.9
Q ss_pred HhcCCCCc-CeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEee----C
Q 042457 87 ATEDFDIK-YCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLH----K 159 (361)
Q Consensus 87 ~~~~~~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~ 159 (361)
.+++|.+. ++||-|-.|.|-.+.. .+|+.+|+|++.... ...+|+++--.. .|||||.++++|.+ .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-------KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-------KARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-------HHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 35566665 4699999999999854 478999999997543 344677765444 79999999998875 3
Q ss_pred CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC---CCCeEEee
Q 042457 160 KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS---KLEAFVAD 236 (361)
Q Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---~~~~kl~D 236 (361)
..+.+|||.|+||.|++.+++.+. ..+++.++-.|+.||+.|+.|||+. +|.||||||+|+|... |..+||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred eeeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecc
Confidence 578899999999999999987653 3699999999999999999999999 9999999999999954 45689999
Q ss_pred ecCccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccC-CcchhHhhhhcccCCC
Q 042457 237 FGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSF-NPKIMLIDLLDQRAPS 315 (361)
Q Consensus 237 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~ 315 (361)
||+++.... .......+-|+.|.|||++...+|+...|+||+||+||-|++|.+||-..... -...+..++..+....
T Consensus 208 fGFAK~t~~-~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~F 286 (400)
T KOG0604|consen 208 FGFAKETQE-PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEF 286 (400)
T ss_pred cccccccCC-CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccC
Confidence 999986543 34455667899999999999999999999999999999999999998654432 2334556666666665
Q ss_pred CCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 316 PIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
|....... .+...++|+.+|..+|.+|.|++|+++|||+.+.
T Consensus 287 P~pEWs~V--Se~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 287 PEPEWSCV--SEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred CChhHhHH--HHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 55433222 2347789999999999999999999999999874
No 341
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.5e-40 Score=292.81 Aligned_cols=245 Identities=27% Similarity=0.404 Sum_probs=187.9
Q ss_pred CeeeecCceeEEEEEeC----CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee-CCeEEEEEEec
Q 042457 95 YCIGTGGYGSVYRAQLP----SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH-KKCMFLIYKYM 169 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~ 169 (361)
+.||+|+||.||+|... ++..||+|.+..... ....+.+..|+.+++.++|||++++++++.. ++..++++||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCC-HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 35899999999999753 245799998864332 2235678899999999999999999998764 55689999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC-
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS- 248 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~- 248 (361)
.+++|.+++..... .+++..+..++.|++.||+|||+. +++|+||||+|||+++++.+||+|||+++.......
T Consensus 80 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 80 KHGDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 99999999975432 467788899999999999999999 999999999999999999999999999876533211
Q ss_pred ---CcccccccccccccccccccccCccchhhhHHHHHHHHHhC-CCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 249 ---NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMG-RHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 249 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
......++..|+|||.+.+..++.++||||||+++|||++| ..||..... ................. .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~---- 226 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS---FDITVYLLQGRRLLQPE-Y---- 226 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHhcCCCCCCCC-c----
Confidence 11123356789999998888899999999999999999995 566653322 11222222222111111 0
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
....+.+++.+||+.+|++||++.++++.
T Consensus 227 ~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 227 CPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 11248899999999999999999999853
No 342
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2e-40 Score=299.08 Aligned_cols=254 Identities=24% Similarity=0.374 Sum_probs=199.7
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCc-chHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSE-TELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
+.|...+.||+|+||.||+|... +++.+|+|.+.... ........+.+|+++++.++|+|++++++++...+..++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34666788999999999999754 67889999886432 22233467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
||+. |++.+.+..... .+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9996 577777654332 578999999999999999999999 9999999999999999999999999998765332
Q ss_pred CCCccccccccccccccccc---ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhH
Q 042457 247 SSNRTVVAGTHGYIAPELAY---TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVI 323 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
....++..|+|||.+. ...++.++||||||+++|+|++|+.||..... ............+.....
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~---- 237 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIAQNESPALQSG---- 237 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH---HHHHHHHhhcCCCCcCcc----
Confidence 2235788999999874 35678899999999999999999999764332 111222222222111110
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCC
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPS 359 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~ 359 (361)
.....+.+++.+||+.+|++||++.++++|||+...
T Consensus 238 ~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 238 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred cccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 112247889999999999999999999999999753
No 343
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.4e-40 Score=294.46 Aligned_cols=249 Identities=26% Similarity=0.413 Sum_probs=197.7
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCC----EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGK----IVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 162 (361)
..+|++.+.||+|+||.||+|... +|. .+|+|.+..... ......+.+|+..+++++|+|++++++++.. ...
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 456888899999999999999764 233 589998876544 2335678899999999999999999999987 778
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++++||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 999999999999999976543 489999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCCcc--cccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhccc-CCCCCC
Q 042457 243 LHSDSSNRT--VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQR-APSPID 318 (361)
Q Consensus 243 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 318 (361)
......... ...++..|+|||.+....++.++|+||||+++||+++ |+.||..... ......+.... .+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 235 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA---VEIPDLLEKGERLPQPPI 235 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH---HHHHHHHhCCCCCCCCCC
Confidence 643322111 1223568999999888889999999999999999999 9999875432 11122222221 111211
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.. ..+.+++.+||..||++|||+.++++
T Consensus 236 ~~------~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 236 CT------IDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CC------HHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 11 24778899999999999999999864
No 344
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.7e-40 Score=291.91 Aligned_cols=235 Identities=26% Similarity=0.410 Sum_probs=186.8
Q ss_pred CeeeecCceeEEEEEeCCCC-----------EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 95 YCIGTGGYGSVYRAQLPSGK-----------IVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
+.||+|+||.||+|...+.. .+++|.+...... ...+.+|+.+++.++|+||+++++++.. ...+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 35899999999999775432 5788877654432 4778899999999999999999999988 7789
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC-------CeEEee
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL-------EAFVAD 236 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~-------~~kl~D 236 (361)
+|+||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++ .++|+|
T Consensus 77 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCC
Confidence 99999999999999976543 588999999999999999999999 999999999999999887 799999
Q ss_pred ecCccccCCCCCCccccccccccccccccccc--ccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccC
Q 042457 237 FGVARLLHSDSSNRTVVAGTHGYIAPELAYTM--VVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRA 313 (361)
Q Consensus 237 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 313 (361)
||++..... .....++..|+|||++.+. .++.++||||||+++|||++ |..|+........ . ... ....
T Consensus 152 fg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-~--~~~-~~~~ 223 (259)
T cd05037 152 PGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-E--RFY-QDQH 223 (259)
T ss_pred CCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-H--HHH-hcCC
Confidence 999876543 2223466789999998776 78999999999999999999 5777765432111 1 111 1111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 314 PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
..+.... ..+.+++.+||+.+|.+|||+.++++
T Consensus 224 ~~~~~~~------~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 224 RLPMPDC------AELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred CCCCCCc------hHHHHHHHHHhccChhhCCCHHHHHH
Confidence 1111111 35889999999999999999999875
No 345
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.3e-41 Score=308.62 Aligned_cols=258 Identities=24% Similarity=0.351 Sum_probs=201.7
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCe----
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKC---- 161 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 161 (361)
..++|.+.+.||+|++|.||+|... +++.||+|++............+.+|+.+++.++|+|++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3567999999999999999999765 57899999987654333334667789999999999999999998876554
Q ss_pred --EEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecC
Q 042457 162 --MFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGV 239 (361)
Q Consensus 162 --~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~ 239 (361)
.++|+||+ +++|.+++... .+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccc
Confidence 89999998 67999888753 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC-----
Q 042457 240 ARLLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA----- 313 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----- 313 (361)
+...... .....++..|+|||.+.+ ..++.++||||||+++||+++|+.||....... ....+.+...
T Consensus 165 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~---~~~~i~~~~~~~~~~ 238 (343)
T cd07851 165 ARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID---QLKRIMNLVGTPDEE 238 (343)
T ss_pred ccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHhcCCCCHH
Confidence 9765432 223457888999998765 467889999999999999999999986433211 1111111000
Q ss_pred ------------------CCCCCC--hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 314 ------------------PSPIDD--QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 314 ------------------~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
...... .........+.+++.+||+.||++|||+.++++||||++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~ 303 (343)
T cd07851 239 LLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE 303 (343)
T ss_pred HHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence 000000 000001235889999999999999999999999999976
No 346
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.6e-40 Score=292.56 Aligned_cols=253 Identities=23% Similarity=0.387 Sum_probs=198.7
Q ss_pred CCCCcCeeeecCceeEEEEEeCC--CCEEEEEEeccCc--------chHHHHHHHHHHHHHHhc-CCCCcceeeeEEEee
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLPS--GKIVALKKLHHSE--------TELAFLESFQTEARLLSQ-IRHRNIVKLYGFCLH 158 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~--------~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~ 158 (361)
+|++.+.||+|+||.||+|.... ++.+|+|.+.... ........+..|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999998754 6889999875432 122334567788888875 799999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhccC-CccCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEEeCCCCCCeeeCCCCCeEEee
Q 042457 159 KKCMFLIYKYMRRGSLFCVLRND-DEAIQLDWTKRVNIVKSMAHALSYLHY-DCIPSIVHRDISSNNILLNSKLEAFVAD 236 (361)
Q Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~i~H~dlk~~Nill~~~~~~kl~D 236 (361)
.+..+++|||+++++|.+++... .....+++..++.++.|++.||.|||+ . +++|+||+|+||+++.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999887542 122368999999999999999999996 5 899999999999999999999999
Q ss_pred ecCccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCC
Q 042457 237 FGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSP 316 (361)
Q Consensus 237 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 316 (361)
||.+....... ......++..|+|||.+.+..++.++|+||||+++|||++|+.||..... ......+.......
T Consensus 158 fg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~- 232 (269)
T cd08528 158 FGLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM---LSLATKIVEAVYEP- 232 (269)
T ss_pred ccceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH---HHHHHHHhhccCCc-
Confidence 99998654433 33345588899999999988899999999999999999999999864322 11122222222211
Q ss_pred CCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 317 IDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.... .....+.+++.+||+.||++|||+.|+.++
T Consensus 233 ~~~~---~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 233 LPEG---MYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred CCcc---cCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 1110 011248889999999999999999998764
No 347
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.1e-40 Score=303.23 Aligned_cols=263 Identities=23% Similarity=0.329 Sum_probs=201.3
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee-CCeE
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH-KKCM 162 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~ 162 (361)
...+++|++.+.||.|+||.||++.. .+|+.||+|++..........+.+..|+++++.++|||++++++++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 34678899999999999999999964 478999999886543332334677889999999999999999999876 4578
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++++||+ +++|.+++... .+++.....++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++..
T Consensus 86 ~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 86 YFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 9999998 56888887643 478888889999999999999999 999999999999999999999999999875
Q ss_pred cCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc-----------
Q 042457 243 LHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD----------- 310 (361)
Q Consensus 243 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~----------- 310 (361)
.... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.............+...
T Consensus 158 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd07856 158 QDPQ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTIC 234 (328)
T ss_pred cCCC---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 4321 222356788999998765 5689999999999999999999999865432110000000000
Q ss_pred ---------c-cCCCCCCChhhH-HHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 311 ---------Q-RAPSPIDDQTVI-QDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 311 ---------~-~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
. ....+....... .....+.+++.+||+.+|++|||+.+++.||||++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~ 293 (328)
T cd07856 235 SENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAP 293 (328)
T ss_pred chhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccc
Confidence 0 000000000000 01235889999999999999999999999999964
No 348
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-42 Score=314.76 Aligned_cols=256 Identities=25% Similarity=0.408 Sum_probs=208.0
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEeC--CCC--EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQLP--SGK--IVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK 160 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 160 (361)
.+..+...+.++||+|.||.|++|.|. +|+ .||||.++...... ...+|++|+.+|.+++|+|++++||+..+ .
T Consensus 106 lIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-q 183 (1039)
T KOG0199|consen 106 LIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-Q 183 (1039)
T ss_pred eccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-c
Confidence 344555667788999999999999775 344 68999998766543 46899999999999999999999999988 5
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
...+|+|.++.|+|.+.|++ .....|-......++.|||.||.||..+ ++|||||..+|+|+.....+||+|||+.
T Consensus 184 p~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLm 259 (1039)
T KOG0199|consen 184 PAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLM 259 (1039)
T ss_pred hhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccce
Confidence 68899999999999999998 3344688889999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCcccc---cccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCC
Q 042457 241 RLLHSDSSNRTVV---AGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSP 316 (361)
Q Consensus 241 ~~~~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 316 (361)
+.+.......... .-...|+|||.+....++.++|||+|||++|||+| |..||......+.... .+ -.++++.+
T Consensus 260 RaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~-iD-~~erLpRP 337 (1039)
T KOG0199|consen 260 RALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN-ID-AGERLPRP 337 (1039)
T ss_pred eccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh-cc-ccccCCCC
Confidence 9886544333211 12457999999999999999999999999999999 8999876554221111 11 23344444
Q ss_pred CCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCC
Q 042457 317 IDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNP 354 (361)
Q Consensus 317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp 354 (361)
..... .++++++.||..+|.+|||+..|.+.-
T Consensus 338 k~cse------dIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 338 KYCSE------DIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCChH------HHHHHHHHhccCCccccccHHHHHHhH
Confidence 44332 489999999999999999999986443
No 349
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6e-41 Score=305.61 Aligned_cols=256 Identities=23% Similarity=0.337 Sum_probs=217.5
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
....|.+...||+|.|+.|.+|+. .+|..||||.+.....+......+.+|+++|..++|||||+++.+......+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 346688999999999999999965 4689999999988877666667789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+.+|.+++++.+.+ .........++.|+..+++|||++ .|+|||||++|+||+.+.++||+|||++..+.
T Consensus 134 ~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~- 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD- 206 (596)
T ss_pred EEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec-
Confidence 99999999999999877 455588899999999999999999 99999999999999999999999999998876
Q ss_pred CCCCccccccccccccccccccccc-CccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 246 DSSNRTVVAGTHGYIAPELAYTMVV-TEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
........+|++.|.|||++.+..+ .+++|+||+|+++|-|+.|..||++..- .......+.+....+.....
T Consensus 207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l---k~Lr~rvl~gk~rIp~~ms~--- 280 (596)
T KOG0586|consen 207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL---KELRPRVLRGKYRIPFYMSC--- 280 (596)
T ss_pred ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc---ccccchheeeeecccceeec---
Confidence 3344556789999999999998765 5799999999999999999999985432 22223334444333333222
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
...+++++++-.+|.+|++++++..|.|...
T Consensus 281 ---dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 281 ---DCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred ---hhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 2667888999999999999999999999864
No 350
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.3e-40 Score=293.06 Aligned_cols=255 Identities=24% Similarity=0.328 Sum_probs=198.7
Q ss_pred CCCCcCeeeecCceeEEEEEeCC-CCEEEEEEeccCc---chHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLPS-GKIVALKKLHHSE---TELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
+|.+.+.||+|+||.||++.... +..+++|.++... ........+..|+.+++.++|||++++++++...+..+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47788999999999999996643 4445566554321 1222234566789999999999999999999999999999
Q ss_pred EEeccCCChhhhhccC-CccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 166 YKYMRRGSLFCVLRND-DEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
+||+++++|.+++... .....+++..++.++.|++.|+.|||+. +++|+||+|+||++++ +.++|+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999888642 1223689999999999999999999999 9999999999999976 569999999987764
Q ss_pred CCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 245 SDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 245 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
..........++..|+|||.+.+..++.++|+||||+++|+|++|..||..... ............+.. . ..
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~----~~ 228 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF---LSVVLRIVEGPTPSL-P----ET 228 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHHcCCCCCC-c----ch
Confidence 443333345578899999998888889999999999999999999999864321 112222222222111 1 11
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
....+.+++.+||+.+|++||++.|+++||||
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 229 YSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred hcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 12357889999999999999999999999997
No 351
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=280.23 Aligned_cols=255 Identities=20% Similarity=0.330 Sum_probs=201.0
Q ss_pred CCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEEEEec
Q 042457 92 DIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 92 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
+....||+|+.|.|++.+.. +|...|||.+.......+ .+.++..++++..- ++|.||+.+|+|..+..+++-||.|
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee-~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEE-NKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHH-HHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 33455999999999999765 589999999987766543 46677777777665 4899999999999999999999988
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 249 (361)
...++.+++.... ++++.-+-++...++.||.||-+++ +|+|||+||+|||+|+.|++|++|||++..+.... .
T Consensus 174 -s~C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk-A 247 (391)
T KOG0983|consen 174 -STCAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK-A 247 (391)
T ss_pred -HHHHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccc-c
Confidence 4456666655433 5778778899999999999999886 99999999999999999999999999997765433 3
Q ss_pred ccccccccccccccccc---ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 250 RTVVAGTHGYIAPELAY---TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
.+...|.+.|||||.+. ...|+.++||||||+.++||.||+.||..-.. .-..+..+++..++.........
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t--dFe~ltkvln~ePP~L~~~~gFS--- 322 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT--DFEVLTKVLNEEPPLLPGHMGFS--- 322 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc--cHHHHHHHHhcCCCCCCcccCcC---
Confidence 33446889999999875 34688899999999999999999999875332 12234445554443222222111
Q ss_pred HHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..+.+++..||.+|+.+||...++|+|||++.
T Consensus 323 p~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 323 PDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred HHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence 13788999999999999999999999999875
No 352
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.9e-40 Score=293.55 Aligned_cols=251 Identities=27% Similarity=0.389 Sum_probs=197.6
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeCC----CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLPS----GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 162 (361)
..++|.+.+.||+|+||.||+|...+ ...|++|....... ....+.+.+|+.++++++|+||+++++++.. +..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 34568888999999999999997643 24689998875543 2334678899999999999999999999875 457
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++||||+++++|.+++..... .+++..++.++.+++.||+|||+. +++|+||||+||+++.++.++|+|||++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeee
Confidence 899999999999999976432 589999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCC-cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcc-cCCCCCCC
Q 042457 243 LHSDSSN-RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQ-RAPSPIDD 319 (361)
Q Consensus 243 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 319 (361)
....... .....++..|+|||.+.+..++.++||||||+++||+++ |+.||...... .....+... ..+.+...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~ 233 (270)
T cd05056 157 LEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN---DVIGRIENGERLPMPPNC 233 (270)
T ss_pred cccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHcCCcCCCCCCC
Confidence 5443221 122234567999999888889999999999999999996 99998754432 111222221 11111111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
...+.+++.+|+..+|++|||+.++++.
T Consensus 234 ------~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 234 ------PPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred ------CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1258889999999999999999998753
No 353
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.2e-40 Score=304.96 Aligned_cols=259 Identities=24% Similarity=0.346 Sum_probs=201.0
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC----
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK---- 160 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 160 (361)
...++|.+.+.||+|+||.||++.. .+|..||||++............+..|+.+++.++|+||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 3567899999999999999999964 47899999998654433333466889999999999999999999987653
Q ss_pred --eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 161 --CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 161 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
..++||||+ +++|.+++... .+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999998 77898887643 589999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc-----
Q 042457 239 VARLLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR----- 312 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~----- 312 (361)
++...... .....++..|+|||.+.+ ..++.++|+||||+++|++++|+.||....... ....+....
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~ 237 (343)
T cd07880 164 LARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD---QLMEIMKVTGTPSK 237 (343)
T ss_pred cccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCH
Confidence 98765332 223356889999998865 457889999999999999999999987543211 000000000
Q ss_pred -----------------CCCCCCChh-h--HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 313 -----------------APSPIDDQT-V--IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 313 -----------------~~~~~~~~~-~--~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.+....... . ......+.+++.+|++.||++|||+.++++||||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence 000000000 0 001124779999999999999999999999999975
No 354
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.8e-40 Score=291.10 Aligned_cols=244 Identities=25% Similarity=0.425 Sum_probs=195.0
Q ss_pred cCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
++|.+.+.||+|+||.||++.. +++.||+|....... .+.+.+|+.++++++|+|++++++++.... .+++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~----~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVT----AQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcch----HHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEEC
Confidence 4588899999999999999986 778899999865432 356889999999999999999999987654 7999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~- 154 (254)
T cd05083 80 MSKGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV- 154 (254)
T ss_pred CCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC-
Confidence 999999999976432 2578999999999999999999999 99999999999999999999999999987543221
Q ss_pred CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDII 327 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
.....+..|+|||.+.+..++.++|+||||+++|||++ |+.||...... .....+.......+.. ....
T Consensus 155 --~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~-----~~~~ 224 (254)
T cd05083 155 --DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK---EVKECVEKGYRMEPPE-----GCPA 224 (254)
T ss_pred --CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH---HHHHHHhCCCCCCCCC-----cCCH
Confidence 11234567999999988889999999999999999998 99998654321 1112222221111111 1123
Q ss_pred HHHHHHhhhcCCCCCCCCCccccccC
Q 042457 328 LVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 328 ~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
.+.+++.+||+.+|++|||++++++.
T Consensus 225 ~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 225 DVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 57899999999999999999998753
No 355
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1e-39 Score=286.65 Aligned_cols=249 Identities=27% Similarity=0.458 Sum_probs=199.3
Q ss_pred CCCcCeeeecCceeEEEEEeCC-----CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 91 FDIKYCIGTGGYGSVYRAQLPS-----GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
+.+.+.||.|+||.||++...+ +..||+|.+....... ..+.+..|+..++.++|+||+++++++...+..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ-QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH-HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 3567889999999999997754 4789999997654432 357888999999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|||+++++|.+++...... .+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 80 ~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EeccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 9999999999999764421 289999999999999999999999 999999999999999999999999999976654
Q ss_pred CCCCcc-cccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhH
Q 042457 246 DSSNRT-VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVI 323 (361)
Q Consensus 246 ~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
...... ...++..|+|||.+.+..++.++||||+|+++++|++ |+.||..... ................. .
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-~--- 228 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN---EEVLEYLKKGYRLPKPE-N--- 228 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhcCCCCCCCC-c---
Confidence 322211 2236789999999888889999999999999999998 8888765322 22222222222211111 1
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 324 QDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 324 ~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
....+.+++.+||+.||++|||+.|+++
T Consensus 229 -~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 229 -CPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred -CCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 1224888999999999999999999876
No 356
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4e-40 Score=293.47 Aligned_cols=254 Identities=26% Similarity=0.397 Sum_probs=200.1
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-----CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee--CCe
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-----SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH--KKC 161 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~ 161 (361)
+.|.+.+.||+|+||.||++.+. ++..+|+|.+...... ...+.+..|++.++.++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 45777889999999999999753 3678999999866554 345789999999999999999999999987 557
Q ss_pred EEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
.+++|||+++++|.+++..... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 8999999999999999976543 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCc---ccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCc-----------chhHhh
Q 042457 242 LLHSDSSNR---TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNP-----------KIMLID 307 (361)
Q Consensus 242 ~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-----------~~~~~~ 307 (361)
......... ....++..|+|||...+..++.++||||||+++|||++|+.|+........ ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 765322211 112345679999999888899999999999999999999999754322110 011112
Q ss_pred hhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 308 LLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
........+... .....+.+++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 238 LLKEGERLPRPP----SCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHcCCcCCCCc----cCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 222211111111 11235889999999999999999999875
No 357
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7.2e-40 Score=290.67 Aligned_cols=255 Identities=24% Similarity=0.382 Sum_probs=202.0
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCe
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP------SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKC 161 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 161 (361)
.++|+....||+|+||.||+|+.. +.+.|++|.+...... ...+.+..|++++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDE-NLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccch-HHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 367888999999999999999753 3467999988654432 235778999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhccCCcc------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEe
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDEA------IQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVA 235 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~ 235 (361)
.++||||+++++|.+++...... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEc
Confidence 99999999999999999765422 2589999999999999999999999 99999999999999999999999
Q ss_pred eecCccccCCCCC-CcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccC
Q 042457 236 DFGVARLLHSDSS-NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRA 313 (361)
Q Consensus 236 Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 313 (361)
|||++........ ......++..|+|||.+.+..++.++||||||+++|+|++ |..||..... ............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~---~~~~~~~~~~~~ 236 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD---EEVLNRLQAGKL 236 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch---HHHHHHHHcCCc
Confidence 9999865432221 2223346778999999888888999999999999999999 8888864332 122222222222
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 314 PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
..+.... ....+.+++.+||+.+|++|||+.|+++.
T Consensus 237 ~~~~~~~----~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 237 ELPVPEG----CPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CCCCCCC----CCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 2111111 11258899999999999999999999864
No 358
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=7.8e-40 Score=289.41 Aligned_cols=246 Identities=20% Similarity=0.295 Sum_probs=183.2
Q ss_pred eeeecCceeEEEEEeCCC---CEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCC
Q 042457 96 CIGTGGYGSVYRAQLPSG---KIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
.||+|+||.||+|...++ ..+++|.+...... ...+.+.+|+..++.++||||+++++.|......++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASS-KEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCCh-HHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 599999999999965443 34667776654332 23478899999999999999999999999999999999999999
Q ss_pred ChhhhhccCCc-cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC--CC
Q 042457 173 SLFCVLRNDDE-AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SN 249 (361)
Q Consensus 173 ~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~--~~ 249 (361)
+|.+++..... ....++..+..++.|++.||+|||+. +++|+||||+|||++.++.++|+|||++....... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999976432 22467777889999999999999999 99999999999999999999999999976432211 11
Q ss_pred cccccccccccccccccc-------cccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCC---CCCC
Q 042457 250 RTVVAGTHGYIAPELAYT-------MVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAP---SPID 318 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~ 318 (361)
.....++..|+|||++.. ..++.++||||||+++|||++ |..||..... .........+... .+..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~ 234 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD---REVLNHVIKDQQVKLFKPQL 234 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHhhcccccCCCcc
Confidence 223457889999998743 245789999999999999997 5778764332 1111222111111 1111
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
... ....+.+++..|| .+|++|||++++++
T Consensus 235 ~~~---~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 235 ELP---YSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred CCC---CcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 101 1124677888999 67999999999875
No 359
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.4e-40 Score=304.42 Aligned_cols=261 Identities=21% Similarity=0.296 Sum_probs=195.6
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC-------
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK------- 159 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------- 159 (361)
..+|.+.+.||.|+||.||+|.. .+|+.||+|.+...... ..+.+.+|+++++.++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~--~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQ--SVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCc--hHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 36788999999999999999965 46889999998765442 246788999999999999999999776543
Q ss_pred -------CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC-CCC
Q 042457 160 -------KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS-KLE 231 (361)
Q Consensus 160 -------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~-~~~ 231 (361)
...++++||++ ++|.+++... .+++..++.++.|++.||.|||+. +++|+||||+||+++. ++.
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 35789999997 5888887543 488999999999999999999999 9999999999999974 567
Q ss_pred eEEeeecCccccCCCCCC---cccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHh-
Q 042457 232 AFVADFGVARLLHSDSSN---RTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLI- 306 (361)
Q Consensus 232 ~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~- 306 (361)
++|+|||++......... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.............
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 899999998765332111 122346888999997654 567889999999999999999999996443211000000
Q ss_pred ------------------hhhcccCCCCCCChh--hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 307 ------------------DLLDQRAPSPIDDQT--VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 307 ------------------~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
............... .......+.+++.+||+.||.+|||+.|+++||||+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 000000000000000 0011134778999999999999999999999999973
No 360
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.7e-40 Score=296.68 Aligned_cols=251 Identities=25% Similarity=0.406 Sum_probs=195.3
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCC----EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGK----IVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 162 (361)
.++|+..+.||+|+||.||+|... +|. .||+|.+....... ....+.+|+.+++.++||||++++|+|... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK-ANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHH-HHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 456778889999999999999753 443 57899887554322 235688999999999999999999999764 46
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++++||+++|+|.+++..... .+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeeehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 799999999999999876432 478899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCC
Q 042457 243 LHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDD 319 (361)
Q Consensus 243 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
....... .....++..|+|||.+.+..++.++||||||+++||+++ |+.||...... ............+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~ 234 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR----EIPDLLEKGERLPQPP 234 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHCCCCCCCCC
Confidence 6433221 222335678999999988889999999999999999998 89998653321 1122222211111111
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 320 QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 320 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
. ....+.+++.+||..+|++||++.++++.
T Consensus 235 ~----~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 235 I----CTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred C----CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1 11247889999999999999999998753
No 361
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.7e-40 Score=299.75 Aligned_cols=261 Identities=22% Similarity=0.319 Sum_probs=195.8
Q ss_pred CCCCcCeeeecCceeEEEEEeC-C--CCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeC----Ce
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-S--GKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHK----KC 161 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~----~~ 161 (361)
+|.+.+.||+|+||.||++... + +..||+|.+..........+.+.+|+.+++++ +|+||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777889999999999999764 3 77899999875433323346678899999999 599999999976543 45
Q ss_pred EEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 162 MFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
.++++||+. ++|.+++.... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 788899885 68888886544 589999999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCCC----Ccccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCc------------chh
Q 042457 242 LLHSDSS----NRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNP------------KIM 304 (361)
Q Consensus 242 ~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~------------~~~ 304 (361)
....... ......|+..|+|||.+.+ ..++.++|+||+|+++|++++|+.||........ ...
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 6543221 1223458889999998765 4688999999999999999999999875432100 000
Q ss_pred Hhhhhc--------ccCCCC-CC-ChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 305 LIDLLD--------QRAPSP-ID-DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 305 ~~~~~~--------~~~~~~-~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
...... .....+ .. ..........+.+++.+||+.||.+|||+.|+++|||++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~ 296 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLA 296 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence 000000 000000 00 000000123588999999999999999999999999996
No 362
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.9e-41 Score=283.85 Aligned_cols=268 Identities=24% Similarity=0.322 Sum_probs=202.0
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC---C--CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee-CCe
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP---S--GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH-KKC 161 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~---~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~ 161 (361)
-..|+....||+|.||.||++.-. + ...+|+|+++........-....+|+.+++.++|||++.+..++.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 346888999999999999999432 2 2379999998775433333556789999999999999999999887 778
Q ss_pred EEEEEEeccCCChhhhhccCC--ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC----CCeEEe
Q 042457 162 MFLIYKYMRRGSLFCVLRNDD--EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK----LEAFVA 235 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~----~~~kl~ 235 (361)
+++++||.+. +|...++..+ ....++......|+.||+.|+.|||++ -+.||||||.||||..+ |.+||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEee
Confidence 9999999976 8888876432 234688889999999999999999999 89999999999999887 999999
Q ss_pred eecCccccCCCCC---Cccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCccc-------C--Ccc
Q 042457 236 DFGVARLLHSDSS---NRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSS-------F--NPK 302 (361)
Q Consensus 236 Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-------~--~~~ 302 (361)
|+|+++.+...-. .....+-|..|.|||.+.+. .|+.+.|||+.|||+.||+|-.+-|..... + +.-
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 9999998865432 22345679999999988864 689999999999999999999888754321 0 000
Q ss_pred hhHhhhhcccCCC--------CC------------CChh-hHH-------HHHHHHHHHhhhcCCCCCCCCCccccccCC
Q 042457 303 IMLIDLLDQRAPS--------PI------------DDQT-VIQ-------DIILVSKIAFACLRSKPKSRPTMRRSFPNP 354 (361)
Q Consensus 303 ~~~~~~~~~~~~~--------~~------------~~~~-~~~-------~~~~l~~li~~cl~~dP~~RPs~~eil~hp 354 (361)
....+++...... |. .+.. ... ......+|+.++|.+||.+|.|++|.++|+
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 0111111110000 00 0000 000 001266889999999999999999999999
Q ss_pred CCCCC
Q 042457 355 EINPS 359 (361)
Q Consensus 355 ~~~~~ 359 (361)
||.+.
T Consensus 339 yF~~d 343 (438)
T KOG0666|consen 339 YFTED 343 (438)
T ss_pred ccccC
Confidence 99875
No 363
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.4e-40 Score=290.07 Aligned_cols=237 Identities=22% Similarity=0.421 Sum_probs=185.9
Q ss_pred eeeecCceeEEEEEeCC--------CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 96 CIGTGGYGSVYRAQLPS--------GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
.||+|+||.||+|.... ...+++|.+..... ...+.+..|+.+++.++|||++++++++..+...++|||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHR--NYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhH--HHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 58999999999996532 23488888754332 234678899999999999999999999999899999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCC--------eEEeeecC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLE--------AFVADFGV 239 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~--------~kl~Dfg~ 239 (361)
|+++|+|.+++..... .+++..++.++.|++.||+|||+. +++|+||||+||+++.++. ++++|||+
T Consensus 80 ~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 80 YVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred cCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 9999999999976543 578999999999999999999999 9999999999999987765 58999998
Q ss_pred ccccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCC-CCCCCcccCCcchhHhhhhcccCCCCC
Q 042457 240 ARLLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGR-HPGDLLSSFNPKIMLIDLLDQRAPSPI 317 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (361)
+..... .....++..|+|||.+.+ ..++.++||||||+++|||++|. .|+....... ...........+.
T Consensus 155 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~----~~~~~~~~~~~~~ 226 (258)
T cd05078 155 SITVLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK----KLQFYEDRHQLPA 226 (258)
T ss_pred ccccCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH----HHHHHHccccCCC
Confidence 865432 222457788999999876 45789999999999999999984 5654332211 1112222222221
Q ss_pred CChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 318 DDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
... ..+.+++.+||+.||++|||++++++.
T Consensus 227 ~~~------~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 227 PKW------TELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred CCc------HHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 111 247899999999999999999999864
No 364
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1e-39 Score=289.27 Aligned_cols=251 Identities=27% Similarity=0.416 Sum_probs=194.7
Q ss_pred CCCcCeeeecCceeEEEEEeC----CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC------
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP----SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK------ 160 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 160 (361)
|.+.+.||+|+||.||+|.+. +++.||||++..........+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566788999999999999653 3688999999776544444677889999999999999999999887542
Q ss_pred eEEEEEEeccCCChhhhhccCC---ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeee
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDD---EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADF 237 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 237 (361)
..++++||+++|+|.+++.... ....+++...+.++.|++.||+|||+. +++|+||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2478999999999988874321 223578899999999999999999999 9999999999999999999999999
Q ss_pred cCccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhccc-C
Q 042457 238 GVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQR-A 313 (361)
Q Consensus 238 g~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~-~ 313 (361)
|+++........ .....++..|++||.+.+..++.++||||||+++|||++ |+.||..... ......+.... .
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~~~~~~~~~~~ 234 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEIYNYLIKGNRL 234 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHHHHHHHcCCcC
Confidence 998865432211 112234578999999988888999999999999999999 8888764332 11111111111 1
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 314 PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
..+.. ....+.+++.+||+.+|++|||+.++++.
T Consensus 235 ~~~~~------~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 235 KQPPD------CLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred CCCCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11111 12258899999999999999999998764
No 365
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.3e-40 Score=291.12 Aligned_cols=245 Identities=28% Similarity=0.419 Sum_probs=191.8
Q ss_pred CeeeecCceeEEEEEeCC-------CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 95 YCIGTGGYGSVYRAQLPS-------GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
+.||+|+||.||+|+..+ +..+|+|.+...... .....+.+|+.+++.++||||+++++++...+..+++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD-QEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccch-hhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 358999999999997642 257999988654322 224678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCC----ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC-----CeEEeeec
Q 042457 168 YMRRGSLFCVLRNDD----EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL-----EAFVADFG 238 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~-----~~kl~Dfg 238 (361)
|+++++|.+++.... ....+++.+++.++.|++.||.|||+. +++|+||+|+||+++.++ .++++|||
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 999999999987532 122478999999999999999999998 999999999999999877 89999999
Q ss_pred CccccCCCCCC--cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhccc-CC
Q 042457 239 VARLLHSDSSN--RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQR-AP 314 (361)
Q Consensus 239 ~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~-~~ 314 (361)
++......... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+.... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~---~~~~~~~~~~~~~ 233 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ---EVLQHVTAGGRLQ 233 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---HHHHHHhcCCccC
Confidence 98765332211 112235678999999998899999999999999999998 99998643321 1111111111 11
Q ss_pred CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 315 SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.+.. ....+.+++.+||+.+|.+|||++++++
T Consensus 234 ~~~~------~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 234 KPEN------CPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred Cccc------chHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 1111 1235789999999999999999999875
No 366
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=281.46 Aligned_cols=257 Identities=24% Similarity=0.317 Sum_probs=215.7
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 164 (361)
.-++|+..+.||+|.||.|-+++- .+|+.+|+|+++.... ..+.......|-++|+..+||.+..+--.++..+.+|+
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 346788999999999999999954 4799999999986542 23335677889999999999999999999999999999
Q ss_pred EEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 165 IYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 165 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
||||..||.|.-+|.... .+++...+.+-..|+.||.|||++ +|+.||||.+|.|+|.+|.+||+|||+++.--
T Consensus 246 VMeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc
Confidence 999999999999998765 688889999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 245 SDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 245 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
.........+||+.|+|||++....|..+.|.|.+|++||||++|+.||...+. +....-++......|.....
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh---~kLFeLIl~ed~kFPr~ls~--- 393 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH---EKLFELILMEDLKFPRTLSP--- 393 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch---hHHHHHHHhhhccCCccCCH---
Confidence 666667788999999999999999999999999999999999999999875432 22222233333333333222
Q ss_pred HHHHHHHHHhhhcCCCCCCCC-----CccccccCCCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRP-----TMRRSFPNPEINP 358 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RP-----s~~eil~hp~~~~ 358 (361)
+...|+...|.+||.+|. .++||.+|+||..
T Consensus 394 ---eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~ 429 (516)
T KOG0690|consen 394 ---EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFAS 429 (516)
T ss_pred ---HHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhcc
Confidence 256677789999999998 6889999999975
No 367
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=5e-40 Score=284.15 Aligned_cols=260 Identities=20% Similarity=0.332 Sum_probs=212.3
Q ss_pred HHHHHHHhcCCCCcCeeeecCceeEEEEEe------CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeE
Q 042457 81 FEEIIVATEDFDIKYCIGTGGYGSVYRAQL------PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYG 154 (361)
Q Consensus 81 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 154 (361)
..++.+...+++....+.+|.||.||.|.| ++.+.|.+|.++....+.+ ...+..|..++..+.|||+.++.+
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQ-v~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQ-VNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHH-HHHHHHHHHHHhcCcCCCccceeE
Confidence 456777888899999999999999999944 3456688898887665443 678899999999999999999999
Q ss_pred EEeeC-CeEEEEEEeccCCChhhhhc-----cCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC
Q 042457 155 FCLHK-KCMFLIYKYMRRGSLFCVLR-----NDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS 228 (361)
Q Consensus 155 ~~~~~-~~~~lv~e~~~~g~L~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~ 228 (361)
++.++ ...++++.++.-|+|..+|. +......++..+...++.|++.|++|||.+ +++|.||..+|+++|+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh
Confidence 99875 46899999999999999998 444455788899999999999999999999 9999999999999999
Q ss_pred CCCeEEeeecCccccCCCCCCc--ccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhH
Q 042457 229 KLEAFVADFGVARLLHSDSSNR--TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIML 305 (361)
Q Consensus 229 ~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~ 305 (361)
..++||+|=.+++.+.....+. ........||+||.+.+..|+.++||||||++||||+| |+.|+.+.++++....+
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl 511 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL 511 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH
Confidence 9999999999999876544332 11224568999999999999999999999999999999 99998776654433333
Q ss_pred hhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 306 IDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.+-. +...|... +.++..++.-||+.+|++||+++|+..
T Consensus 512 kdGy--RlaQP~NC------PDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 512 KDGY--RLAQPFNC------PDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred hccc--eecCCCCC------cHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 2221 22333332 235888888999999999999999864
No 368
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.7e-40 Score=321.73 Aligned_cols=257 Identities=26% Similarity=0.436 Sum_probs=197.7
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee---------
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH--------- 158 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------- 158 (361)
.+|+....||+||||.||+++.+ ||+.+|||++.... +......+.+|+..+++++|||||+++..+.+
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 46777888999999999999654 89999999998776 44456778899999999999999999821100
Q ss_pred --------------------------------------------------------------------------------
Q 042457 159 -------------------------------------------------------------------------------- 158 (361)
Q Consensus 159 -------------------------------------------------------------------------------- 158 (361)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred C------------------------------CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHc
Q 042457 159 K------------------------------KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHY 208 (361)
Q Consensus 159 ~------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~ 208 (361)
+ ..+||-||||+..+|.++++.+.... .....++++++|++||+|+|+
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHHh
Confidence 0 12578899999988888887765211 356788999999999999999
Q ss_pred CCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC------------------CCCCCccccccccccccccccccc--
Q 042457 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH------------------SDSSNRTVVAGTHGYIAPELAYTM-- 268 (361)
Q Consensus 209 ~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~------------------~~~~~~~~~~gt~~y~aPE~~~~~-- 268 (361)
. +++||||||.||++|++..+||+|||+++... .+....+..+||.-|+|||++.+.
T Consensus 716 ~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 716 Q---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred C---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 9 99999999999999999999999999998721 001123456799999999998754
Q ss_pred -ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCc
Q 042457 269 -VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTM 347 (361)
Q Consensus 269 -~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 347 (361)
.|+.|+|+||+|++|+||+. ||. ...+....+.++.+...+.+.+ ........-.++|.+++++||.+|||+
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~y---PF~--TsMERa~iL~~LR~g~iP~~~~--f~~~~~~~e~slI~~Ll~hdP~kRPtA 865 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLY---PFG--TSMERASILTNLRKGSIPEPAD--FFDPEHPEEASLIRWLLSHDPSKRPTA 865 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhc---cCC--chHHHHHHHHhcccCCCCCCcc--cccccchHHHHHHHHHhcCCCccCCCH
Confidence 49999999999999999984 333 1222233344455555555411 111222234688999999999999999
Q ss_pred cccccCCCCCC
Q 042457 348 RRSFPNPEINP 358 (361)
Q Consensus 348 ~eil~hp~~~~ 358 (361)
.|+|++.||-.
T Consensus 866 ~eLL~s~llpp 876 (1351)
T KOG1035|consen 866 TELLNSELLPP 876 (1351)
T ss_pred HHHhhccCCCc
Confidence 99999999863
No 369
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=315.14 Aligned_cols=258 Identities=26% Similarity=0.413 Sum_probs=208.7
Q ss_pred HHHHHhcCCCCcCeeeecCceeEEEEEeC--------CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeee
Q 042457 83 EIIVATEDFDIKYCIGTGGYGSVYRAQLP--------SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLY 153 (361)
Q Consensus 83 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~ 153 (361)
.+++..++..+.+.||+|.||.|++|... ....||||.++..... ...+.+..|+++|+.+ +|+|++.++
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 56677777777889999999999999642 1457999999887766 4578899999999998 599999999
Q ss_pred EEEeeCCeEEEEEEeccCCChhhhhccCC-----------cc--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCC
Q 042457 154 GFCLHKKCMFLIYKYMRRGSLFCVLRNDD-----------EA--IQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDIS 220 (361)
Q Consensus 154 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~--~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk 220 (361)
|+|...+..++|+||+..|+|.++|+..+ .. ..++....+.++.|||.||+||++. +++||||.
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLA 445 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLA 445 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhh
Confidence 99999999999999999999999998765 00 1388999999999999999999999 99999999
Q ss_pred CCCeeeCCCCCeEEeeecCccccCCCCCCc-cccc--ccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCc
Q 042457 221 SNNILLNSKLEAFVADFGVARLLHSDSSNR-TVVA--GTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLL 296 (361)
Q Consensus 221 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~--gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~ 296 (361)
++|||+..+..+||+|||+++......... .... -...|||||.+....++.++||||||++||||+| |..||...
T Consensus 446 aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~ 525 (609)
T KOG0200|consen 446 ARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI 525 (609)
T ss_pred hhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence 999999999999999999998765443332 2222 2456999999999999999999999999999999 99998752
Q ss_pred ccCCcchhHhhhhcc-cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 297 SSFNPKIMLIDLLDQ-RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 297 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.. .......+.++ +...|.... .++.++++.||+.+|++||++.|+.+
T Consensus 526 ~~--~~~l~~~l~~G~r~~~P~~c~------~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 526 PP--TEELLEFLKEGNRMEQPEHCS------DEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred Cc--HHHHHHHHhcCCCCCCCCCCC------HHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 21 11112222232 223333322 24889999999999999999998764
No 370
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=6.3e-39 Score=315.51 Aligned_cols=147 Identities=27% Similarity=0.443 Sum_probs=131.6
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
++|.+.+.||+|+||.||+|... +++.||+|++..... .......+..|+.++..++|+||+++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999765 689999999875432 2333467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
||+.+++|.+++.... .+++..++.++.||+.||.|||.. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997654 578899999999999999999999 99999999999999999999999999875
No 371
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-40 Score=256.90 Aligned_cols=263 Identities=22% Similarity=0.316 Sum_probs=205.0
Q ss_pred CCCCcCeeeecCceeEEEEE-eCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 90 DFDIKYCIGTGGYGSVYRAQ-LPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+|...++||+|.||+||+|+ +++++.||+|+++..+.....-....+|+-+++.++|.|||++++....++...+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 35556789999999999995 45689999999987776555557788999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS 248 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 248 (361)
|.. +|..+..+-++ .++......++.|+++||.++|++ ++.||||||.|.|++.+|..|++|||+++.+.-+-.
T Consensus 83 cdq-dlkkyfdslng--~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred hhH-HHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence 955 88888776544 588899999999999999999999 999999999999999999999999999998765554
Q ss_pred Cccccccccccccccccccc-ccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhccc----CC--------
Q 042457 249 NRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQR----AP-------- 314 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~----~~-------- 314 (361)
......-|..|.+|.++.+. -|+...|+||-||++.|+.. |++.|...+..++.......+... .+
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdy 236 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDY 236 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCC
Confidence 45555678999999998865 47889999999999999998 666665433222111111111110 00
Q ss_pred ---CCCCChhhHHHH-----HHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 315 ---SPIDDQTVIQDI-----ILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 315 ---~~~~~~~~~~~~-----~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
+.......+..+ ..=.+++++.+.-+|.+|.++++.++||||.+
T Consensus 237 k~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 237 KPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred cccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 000111112111 11356778888899999999999999999976
No 372
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-39 Score=302.78 Aligned_cols=266 Identities=24% Similarity=0.421 Sum_probs=220.2
Q ss_pred CHHHHHHHhcCCCCcCeeeecCceeEEEEE-eCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEe
Q 042457 80 TFEEIIVATEDFDIKYCIGTGGYGSVYRAQ-LPSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCL 157 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 157 (361)
.++.+...+..|++...||.|.+|.||+++ .++|+.+|+|++....... ++...|.++++.. +|||++.++|++.
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d---eEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE---EEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc---HHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 344555667789999999999999999995 4578999999987766543 5667889999987 6999999999987
Q ss_pred e-----CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCe
Q 042457 158 H-----KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEA 232 (361)
Q Consensus 158 ~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~ 232 (361)
. ++.+|||||||.+|+.-+++++.. ...+.|..+..|+..++.|+.+||.+ .++|||+|-.|||++.++.+
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcE
Confidence 5 467999999999999999998765 44799999999999999999999999 99999999999999999999
Q ss_pred EEeeecCccccCCCCCCccccccccccccccccccc-----ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhh
Q 042457 233 FVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTM-----VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLID 307 (361)
Q Consensus 233 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~ 307 (361)
||.|||++..+......+....||+.|||||++... .|+..+|+||||++..||--|.+|+-+.- +-..+..
T Consensus 163 KLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH---PmraLF~ 239 (953)
T KOG0587|consen 163 KLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH---PMRALFL 239 (953)
T ss_pred EEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc---hhhhhcc
Confidence 999999999988777777788899999999998643 36779999999999999999999965433 2223333
Q ss_pred hhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 308 LLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
+..+.++... .+..|. .++.++|..||.+|-++||++.++|+|||+++
T Consensus 240 IpRNPPPkLk-rp~kWs--~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 240 IPRNPPPKLK-RPKKWS--KKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred CCCCCCcccc-chhhHH--HHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 3333332222 222332 25889999999999999999999999999984
No 373
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=5.7e-39 Score=278.68 Aligned_cols=228 Identities=21% Similarity=0.201 Sum_probs=182.2
Q ss_pred cCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCChhhhh
Q 042457 100 GGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCVL 178 (361)
Q Consensus 100 G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l 178 (361)
|.+|.||++.. .+|+.+|+|++..... +..|...+....|||++++++++...+..+++|||+++|+|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 89999999965 4688999999875432 223445555567999999999999999999999999999999998
Q ss_pred ccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCccccccccc
Q 042457 179 RNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG 258 (361)
Q Consensus 179 ~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~ 258 (361)
.... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++++|||.+....... ....++..
T Consensus 77 ~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~ 147 (237)
T cd05576 77 SKFL---NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---DGEAVENM 147 (237)
T ss_pred HHhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc---ccCCcCcc
Confidence 7654 489999999999999999999999 99999999999999999999999999876553321 22335677
Q ss_pred ccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcC
Q 042457 259 YIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLR 338 (361)
Q Consensus 259 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 338 (361)
|+|||...+..++.++|+||+|+++|||++|+.|+........ . ......+.. ....+.+++.+|++
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~-----~--~~~~~~~~~------~~~~~~~li~~~l~ 214 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN-----T--HTTLNIPEW------VSEEARSLLQQLLQ 214 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc-----c--ccccCCccc------CCHHHHHHHHHHcc
Confidence 9999998888889999999999999999999988653221000 0 000011111 11247889999999
Q ss_pred CCCCCCCCc-----cccccCCCC
Q 042457 339 SKPKSRPTM-----RRSFPNPEI 356 (361)
Q Consensus 339 ~dP~~RPs~-----~eil~hp~~ 356 (361)
.||++|||+ +++++||||
T Consensus 215 ~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 215 FNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCHHHhcCCCccchHHHHcCCCC
Confidence 999999997 899999997
No 374
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-41 Score=327.81 Aligned_cols=256 Identities=26% Similarity=0.385 Sum_probs=209.1
Q ss_pred hcCCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
+-++.....||.|.||.||.| ..++|...|+|.++.............+|..++..++|||+|+++|+-.+.+..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 345667788999999999999 5567999999998777665555677889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
|||++|+|.+.++..+ ..++.-...+..|++.|++|||+. |||||||||.||+++.+|.+|++|||.|..+...
T Consensus 1314 EyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 9999999999998765 456666778899999999999999 9999999999999999999999999999887654
Q ss_pred CCC----cccccccccccccccccccc---cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC-CCCCC
Q 042457 247 SSN----RTVVAGTHGYIAPELAYTMV---VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA-PSPID 318 (361)
Q Consensus 247 ~~~----~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~ 318 (361)
... .....||+.|||||++.+.. ...++||||+||+..||+||+.||...+..- .....+..+.. +.|..
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~--aIMy~V~~gh~Pq~P~~ 1465 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW--AIMYHVAAGHKPQIPER 1465 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh--HHHhHHhccCCCCCchh
Confidence 322 23456999999999987543 5568999999999999999999998655321 11222222222 22222
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
...+-.+++..||..||++|=++.|+++|-|-+
T Consensus 1466 ------ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1466 ------LSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred ------hhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence 112356888999999999999999999998865
No 375
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-40 Score=294.83 Aligned_cols=253 Identities=24% Similarity=0.360 Sum_probs=205.2
Q ss_pred cCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCC
Q 042457 94 KYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
.+.||+|.||+||-|.. ++|+.||||++.+-.-.......+.+|+.+|++++||.||.+...|+..+.+++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 35699999999999955 47999999999776655444578899999999999999999999999999999999999665
Q ss_pred ChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC---CCCeEEeeecCccccCCCCCC
Q 042457 173 SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS---KLEAFVADFGVARLLHSDSSN 249 (361)
Q Consensus 173 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---~~~~kl~Dfg~~~~~~~~~~~ 249 (361)
-|+-.|....+ .+++.....++.||+.||.|||.+ +|+|+||||+|||+.+ .-++||+|||+++.+.. ...
T Consensus 649 MLEMILSsEkg--RL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE-ksF 722 (888)
T KOG4236|consen 649 MLEMILSSEKG--RLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE-KSF 722 (888)
T ss_pred HHHHHHHhhcc--cchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch-hhh
Confidence 55555554433 688888899999999999999999 9999999999999954 35799999999998854 444
Q ss_pred cccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH-HH
Q 042457 250 RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI-IL 328 (361)
Q Consensus 250 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 328 (361)
+...+||+.|+|||++.++.|...-|+||.|+|+|--++|..||....+.+.. ..+..-..++. +|.++ ..
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQ--IQNAaFMyPp~------PW~eis~~ 794 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQ--IQNAAFMYPPN------PWSEISPE 794 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHH--hhccccccCCC------chhhcCHH
Confidence 55678999999999999999999999999999999999999998754332211 11111111111 22222 24
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCCCCCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPEINPSL 360 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~~~~~~ 360 (361)
..+||...|+..-.+|-|.++-+.|||+++..
T Consensus 795 AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 795 AIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred HHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 67899999999999999999999999999753
No 376
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-40 Score=284.66 Aligned_cols=263 Identities=20% Similarity=0.300 Sum_probs=206.2
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-C-C----cceeeeEEEe
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIR-H-R----NIVKLYGFCL 157 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h-~----niv~~~~~~~ 157 (361)
...+++|.+...+|+|.||.|-.+.. ..+..||||+++... ...+..+-|+++++++. + | -++.+.+++.
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd 161 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD 161 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence 34488999999999999999999954 347899999997643 33466778999999993 2 3 3788888999
Q ss_pred eCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC---------
Q 042457 158 HKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS--------- 228 (361)
Q Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~--------- 228 (361)
..++.|+|+|.+ |-|+.++|..++.. +++..+++.++.|+++++++||+. +++|.||||+|||+-+
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~y~-~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~ 236 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENNYI-PFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNP 236 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCCcc-ccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEecc
Confidence 999999999998 66999999886644 688999999999999999999999 9999999999999832
Q ss_pred -----------CCCeEEeeecCccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcc
Q 042457 229 -----------KLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLS 297 (361)
Q Consensus 229 -----------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 297 (361)
+..++++|||.++.-.. .....+.|..|.|||++.+-.++..+||||+||||+|+.||...|...+
T Consensus 237 k~~~~~~r~~ks~~I~vIDFGsAtf~~e---~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe 313 (415)
T KOG0671|consen 237 KKKVCFIRPLKSTAIKVIDFGSATFDHE---HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE 313 (415)
T ss_pred CCccceeccCCCcceEEEecCCcceecc---CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC
Confidence 34578999999975432 2355678999999999999999999999999999999999999887555
Q ss_pred cCCcchhHhhhhcccC------------------CCCCC-------------------ChhhHHHHHHHHHHHhhhcCCC
Q 042457 298 SFNPKIMLIDLLDQRA------------------PSPID-------------------DQTVIQDIILVSKIAFACLRSK 340 (361)
Q Consensus 298 ~~~~~~~~~~~~~~~~------------------~~~~~-------------------~~~~~~~~~~l~~li~~cl~~d 340 (361)
+.+.-.+...++...+ ..+.. ......+...+.+|++.||..|
T Consensus 314 n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 314 NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence 3221112222222110 00000 0001123456899999999999
Q ss_pred CCCCCCccccccCCCCCC
Q 042457 341 PKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 341 P~~RPs~~eil~hp~~~~ 358 (361)
|.+|+|+.|+|+||||+.
T Consensus 394 P~~RiTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 394 PARRITLREALSHPFFAR 411 (415)
T ss_pred ccccccHHHHhcCHHhhc
Confidence 999999999999999985
No 377
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=285.45 Aligned_cols=253 Identities=19% Similarity=0.258 Sum_probs=182.3
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeCC----CCEEEEEEeccCcchHHH---------HHHHHHHHHHHhcCCCCcceee
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLPS----GKIVALKKLHHSETELAF---------LESFQTEARLLSQIRHRNIVKL 152 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~~ 152 (361)
+..++|.+.+.||+|+||.||+|...+ +..+|+|........... ......+...+..++|+|++++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 345689999999999999999997654 345666654332221100 0112234445667789999999
Q ss_pred eEEEeeCC----eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC
Q 042457 153 YGFCLHKK----CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS 228 (361)
Q Consensus 153 ~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~ 228 (361)
++++.... ..+++++++. .++.+.+.... ..++..+..++.|++.||+|||+. +++||||||+|||++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDG 161 (294)
T ss_pred EEeeeEecCCceEEEEEEehhc-cCHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcC
Confidence 99776543 3467777763 35555554432 357788899999999999999999 9999999999999999
Q ss_pred CCCeEEeeecCccccCCCCC-------CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCc
Q 042457 229 KLEAFVADFGVARLLHSDSS-------NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNP 301 (361)
Q Consensus 229 ~~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 301 (361)
++.++|+|||+++....... ......||+.|+|||+..+..++.++|||||||++|||++|+.||........
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 99999999999976632211 11234689999999999999999999999999999999999999986533211
Q ss_pred ch------hHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcccccc
Q 042457 302 KI------MLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFP 352 (361)
Q Consensus 302 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 352 (361)
.. ....+.......+ . ....+.+++..|++.+|++||+++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 242 LIHAAKCDFIKRLHEGKIKIK-N------ANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHHhHHHHHHHhhhhhhccC-C------CCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 11 0111111111111 1 1234889999999999999999999875
No 378
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-39 Score=293.24 Aligned_cols=243 Identities=23% Similarity=0.310 Sum_probs=195.6
Q ss_pred hcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 165 (361)
++.|.+...+|.|+|+.|-.+.. .+++..++|++.....+ ..+|+.++... +||||+++.+.+.+..+.|+|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v 394 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV 394 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccccc------cccccchhhhhcCCCcceeecceecCCceeeee
Confidence 56788888899999999999854 57888999999776322 23566665555 799999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeee-CCCCCeEEeeecCccccC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILL-NSKLEAFVADFGVARLLH 244 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill-~~~~~~kl~Dfg~~~~~~ 244 (361)
||.+.++-+.+.+.... .+. ..+..|+.+|+.++.|||.+ +++||||||+|||+ ++.++++|+|||.++...
T Consensus 395 ~e~l~g~ell~ri~~~~---~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 395 MELLDGGELLRRIRSKP---EFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE 467 (612)
T ss_pred ehhccccHHHHHHHhcc---hhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence 99999998877776554 233 67778999999999999999 99999999999999 688999999999998765
Q ss_pred CCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHH
Q 042457 245 SDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQ 324 (361)
Q Consensus 245 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (361)
.. ....+-|..|.|||++....+++++|+||||++||+|++|+.||...... .++........... .
T Consensus 468 ~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei~~~i~~~~~s~----~ 534 (612)
T KOG0603|consen 468 RS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEIHTRIQMPKFSE----C 534 (612)
T ss_pred hh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHHHHhhcCCcccc----c
Confidence 44 23345678899999999999999999999999999999999998754432 11221111111110 1
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccccCCCC
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~ 356 (361)
......+|+.+||+.||.+||++.++..||||
T Consensus 535 vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 535 VSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred cCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 11247889999999999999999999999999
No 379
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.2e-38 Score=294.44 Aligned_cols=267 Identities=18% Similarity=0.245 Sum_probs=187.1
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-----------------CCCCEEEEEEeccCcchHH------------HHHHHHHH
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-----------------PSGKIVALKKLHHSETELA------------FLESFQTE 137 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~------------~~~~~~~e 137 (361)
..++|++.++||+|+||.||+|.. .+++.||||++........ ..+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999953 2456899999875432110 01223346
Q ss_pred HHHHhcCCCCc-----ceeeeEEEee--------CCeEEEEEEeccCCChhhhhccCCc---------------------
Q 042457 138 ARLLSQIRHRN-----IVKLYGFCLH--------KKCMFLIYKYMRRGSLFCVLRNDDE--------------------- 183 (361)
Q Consensus 138 ~~~l~~l~h~n-----iv~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~--------------------- 183 (361)
+.++.+++|.+ +++++++|.. .+..++||||+++++|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 67777776654 4677887764 3468999999999999998864211
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC-ccccccccccccc
Q 042457 184 AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN-RTVVAGTHGYIAP 262 (361)
Q Consensus 184 ~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aP 262 (361)
...+++..+..++.|++.+|.|||+. +++||||||+|||++.++.+||+|||++......... .....+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12356788899999999999999999 9999999999999999999999999999765432221 1122347899999
Q ss_pred cccccccc----------------------CccchhhhHHHHHHHHHhCCC-CCCCcccCCcchh-------Hhh-hhcc
Q 042457 263 ELAYTMVV----------------------TEKCDVFGFGVVALEVLMGRH-PGDLLSSFNPKIM-------LID-LLDQ 311 (361)
Q Consensus 263 E~~~~~~~----------------------~~~~Dv~slG~~l~el~tg~~-p~~~~~~~~~~~~-------~~~-~~~~ 311 (361)
|.+..... ..+.||||+||+++||++|.. |+......+.+.. ... ....
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 98753221 124699999999999999875 6654322211111 000 1111
Q ss_pred cCCCCCCChhhHHHHHHHHHHHhhhcCCCC---CCCCCccccccCCCCCCCC
Q 042457 312 RAPSPIDDQTVIQDIILVSKIAFACLRSKP---KSRPTMRRSFPNPEINPSL 360 (361)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~eil~hp~~~~~~ 360 (361)
...... .........+|+.+|+..+| .+|+|++|+|+||||.+++
T Consensus 460 ~~~~~~----~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~~ 507 (507)
T PLN03224 460 KYDFSL----LDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPEF 507 (507)
T ss_pred CCCccc----ccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCCC
Confidence 111111 11112247788889999766 6899999999999998764
No 380
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2.8e-37 Score=268.11 Aligned_cols=243 Identities=28% Similarity=0.422 Sum_probs=197.0
Q ss_pred CceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCChhhhhc
Q 042457 101 GYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCVLR 179 (361)
Q Consensus 101 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~ 179 (361)
+||.||+|... +|+.+++|++........ .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 58999999876 489999999976654332 4788899999999999999999999999999999999999999999987
Q ss_pred cCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcccccccccc
Q 042457 180 NDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGY 259 (361)
Q Consensus 180 ~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 259 (361)
... .+++..+..++.+++.++.+||+. +++|+||+|+||++++++.++|+|||.+....... ......++..|
T Consensus 80 ~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~ 152 (244)
T smart00220 80 KRG---RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEY 152 (244)
T ss_pred hcc---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCC
Confidence 654 388999999999999999999999 99999999999999999999999999998765432 22334578899
Q ss_pred cccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCC
Q 042457 260 IAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRS 339 (361)
Q Consensus 260 ~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 339 (361)
++||.+.+..++.++||||||+++|++++|..||..... ... ..+.............. .....+.+++.+|+..
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~l~~ 227 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--LLE-LFKKIGKPKPPFPPPEW--KISPEAKDLIRKLLVK 227 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--HHH-HHHHHhccCCCCccccc--cCCHHHHHHHHHHccC
Confidence 999999888889999999999999999999999865321 111 22222222111111000 0122588899999999
Q ss_pred CCCCCCCccccccCCCC
Q 042457 340 KPKSRPTMRRSFPNPEI 356 (361)
Q Consensus 340 dP~~RPs~~eil~hp~~ 356 (361)
+|++||++.++++||||
T Consensus 228 ~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 228 DPEKRLTAEEALQHPFF 244 (244)
T ss_pred CchhccCHHHHhhCCCC
Confidence 99999999999999997
No 381
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-39 Score=309.17 Aligned_cols=264 Identities=25% Similarity=0.323 Sum_probs=213.3
Q ss_pred HHHHHHHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCcceeeeEEEee
Q 042457 81 FEEIIVATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETE-LAFLESFQTEARLLSQIRHRNIVKLYGFCLH 158 (361)
Q Consensus 81 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 158 (361)
..++....++|.+.+.||+|+||.|..++.. +++.+|+|++..-..- .....-|..|-++|..-+.+-|+.+.-.|++
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3455667789999999999999999999764 6889999998763321 1223678899999999999999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeec
Q 042457 159 KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 238 (361)
++++|+|||||+||+|..++.+.. .+++..++.++..|.-||.-||+. |+|||||||+|||+|.+|++||+|||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccch
Confidence 999999999999999999998776 588888899999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCC-Cccccccccccccccccc----c-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc-
Q 042457 239 VARLLHSDSS-NRTVVAGTHGYIAPELAY----T-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ- 311 (361)
Q Consensus 239 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~----~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~- 311 (361)
.|-.+..+.. .....+|||.|.+||++. + +.|...+|.||+||++|||+.|..||...+-.. ....+++-
T Consensus 221 sClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslve---TY~KIm~hk 297 (1317)
T KOG0612|consen 221 SCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVE---TYGKIMNHK 297 (1317)
T ss_pred hHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHH---HHHHHhchh
Confidence 9988775544 355678999999999885 3 678999999999999999999999986433211 11222222
Q ss_pred -cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCC---ccccccCCCCCC
Q 042457 312 -RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPT---MRRSFPNPEINP 358 (361)
Q Consensus 312 -~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil~hp~~~~ 358 (361)
.+..|.... ......+||.+.+. +|+.|.. ++++-.||||..
T Consensus 298 ~~l~FP~~~~----VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g 343 (1317)
T KOG0612|consen 298 ESLSFPDETD----VSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEG 343 (1317)
T ss_pred hhcCCCcccc----cCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccC
Confidence 333331111 12235666666555 6889998 999999999975
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=9.3e-38 Score=300.20 Aligned_cols=264 Identities=19% Similarity=0.230 Sum_probs=173.0
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC-C----CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEE------
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP-S----GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGF------ 155 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~------ 155 (361)
..++|.+.+.||+|+||.||+|... + +..||+|++...... +....+ .+....+.++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~----e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV----EIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh----HHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 5678999999999999999999764 4 689999987643321 111111 1122222222222211
Q ss_pred EeeCCeEEEEEEeccCCChhhhhccCCcc-----------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeC
Q 042457 156 CLHKKCMFLIYKYMRRGSLFCVLRNDDEA-----------------IQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRD 218 (361)
Q Consensus 156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~d 218 (361)
+......++|+||+.+++|.+++...... .......+..++.|++.||.|||+. +|+|||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRD 280 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRD 280 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCc
Confidence 24556799999999999999988754210 0112334567999999999999999 999999
Q ss_pred CCCCCeeeCC-CCCeEEeeecCccccCCCC-CCccccccccccccccccccc----------------------ccCccc
Q 042457 219 ISSNNILLNS-KLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPELAYTM----------------------VVTEKC 274 (361)
Q Consensus 219 lk~~Nill~~-~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~ 274 (361)
|||+|||+++ ++.+||+|||+++.+.... .......+++.|+|||.+... .++.++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999986 5789999999998654322 223345688999999965322 233467
Q ss_pred hhhhHHHHHHHHHhCCCCCCCcccC------CcchhHhhhhcccCCCCCCC-hhhH----HHHHHHHHHHhhhcCCCCCC
Q 042457 275 DVFGFGVVALEVLMGRHPGDLLSSF------NPKIMLIDLLDQRAPSPIDD-QTVI----QDIILVSKIAFACLRSKPKS 343 (361)
Q Consensus 275 Dv~slG~~l~el~tg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~l~~li~~cl~~dP~~ 343 (361)
|||||||+||||+++..+++..... ..............+..... .... .......+|+.+||+.||++
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~k 440 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQ 440 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCccc
Confidence 9999999999999987775421100 00000000000000000000 0000 00112458999999999999
Q ss_pred CCCccccccCCCCCCC
Q 042457 344 RPTMRRSFPNPEINPS 359 (361)
Q Consensus 344 RPs~~eil~hp~~~~~ 359 (361)
|||++|+|+||||++.
T Consensus 441 R~ta~e~L~Hpff~~~ 456 (566)
T PLN03225 441 RISAKAALAHPYFDRE 456 (566)
T ss_pred CCCHHHHhCCcCcCCC
Confidence 9999999999999863
No 383
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-38 Score=290.72 Aligned_cols=203 Identities=31% Similarity=0.479 Sum_probs=174.3
Q ss_pred CCCcCeeeecCceeEEEEE-eCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC------eEE
Q 042457 91 FDIKYCIGTGGYGSVYRAQ-LPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK------CMF 163 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~ 163 (361)
+...+.||+|+||.||+|+ ..+|+.||||.+..... ....+....|++++++++|+|||++++.-.... ...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~-~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS-LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcc-cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 3445679999999999997 56899999999876432 222467789999999999999999999766543 578
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeC--CCCC--eEEeeecC
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLN--SKLE--AFVADFGV 239 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~--~~~~--~kl~Dfg~ 239 (361)
++||||.+|||+..|++......+++.+.+.++.+++.||.|||++ +|+||||||.||++- ++|+ -||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 9999999999999999987777899999999999999999999999 999999999999983 3343 69999999
Q ss_pred ccccCCCCCCccccccccccccccccc-ccccCccchhhhHHHHHHHHHhCCCCCCCccc
Q 042457 240 ARLLHSDSSNRTVVAGTHGYIAPELAY-TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSS 298 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 298 (361)
|+.++.+. ......||..|.+||+.. ...|+...|.|||||++||+.||..||.....
T Consensus 171 Arel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~ 229 (732)
T KOG4250|consen 171 ARELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG 229 (732)
T ss_pred cccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence 99886555 455567999999999988 48899999999999999999999999975544
No 384
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.2e-40 Score=267.47 Aligned_cols=265 Identities=22% Similarity=0.329 Sum_probs=200.2
Q ss_pred CCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC--------C
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK--------K 160 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------~ 160 (361)
.|.-..++|+|.||+||+++.. +|+.||+|+....+.....-....+|+++|..++|+|++.++..|... .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 4555677999999999999654 578899987655444333345667999999999999999999988643 3
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
..|+|+++|+. +|..+|.+... .++..++.+++.++..||.|+|.. .|+|||+|+.|+|++.++.+||+|||++
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~~v--r~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNRKV--RFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCccc--cccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccc
Confidence 58999999965 88888876543 688899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----Ccccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCC-
Q 042457 241 RLLHSDSS----NRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAP- 314 (361)
Q Consensus 241 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 314 (361)
+.+..... ..+..+-|..|.+||.+.+ ..|+++.|||.-||+|.||+||.+-+........-......+....+
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 87654322 2233456899999998876 46899999999999999999999887654432211111111111100
Q ss_pred ----------------CCCCCh--hh-HHHH------HHHHHHHhhhcCCCCCCCCCccccccCCCCCCCC
Q 042457 315 ----------------SPIDDQ--TV-IQDI------ILVSKIAFACLRSKPKSRPTMRRSFPNPEINPSL 360 (361)
Q Consensus 315 ----------------~~~~~~--~~-~~~~------~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~~ 360 (361)
+|.... .. .+.. ....+|+.+++..||.+|+++.++++|.||.+..
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 000000 00 0001 1467899999999999999999999999997654
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=279.30 Aligned_cols=269 Identities=25% Similarity=0.382 Sum_probs=210.4
Q ss_pred HHHHHHHhcCCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchH-----HHHHHHHHHHHHHhcCCCCcceeeeE
Q 042457 81 FEEIIVATEDFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETEL-----AFLESFQTEARLLSQIRHRNIVKLYG 154 (361)
Q Consensus 81 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~ 154 (361)
|.+-....++|-+.+.||+|||+.||++ .+...+.||||+-....... ...+...+|.++-+.++||.||++|+
T Consensus 455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD 534 (775)
T KOG1151|consen 455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD 534 (775)
T ss_pred hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee
Confidence 3344455677888899999999999999 55678899999865544322 23345678999999999999999999
Q ss_pred EEee-CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC---CC
Q 042457 155 FCLH-KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS---KL 230 (361)
Q Consensus 155 ~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---~~ 230 (361)
++.. .+..|-|+|||+|.+|.-+|+... .+++.+++.|+.||+.||.||.+. .++|+|-||||.|||+-+ .|
T Consensus 535 yfslDtdsFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 535 YFSLDTDSFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred eeeeccccceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccc
Confidence 9985 457899999999999999998776 589999999999999999999976 458999999999999944 47
Q ss_pred CeEEeeecCccccCCCCCC-------cccccccccccccccccc----cccCccchhhhHHHHHHHHHhCCCCCCCcccC
Q 042457 231 EAFVADFGVARLLHSDSSN-------RTVVAGTHGYIAPELAYT----MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSF 299 (361)
Q Consensus 231 ~~kl~Dfg~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 299 (361)
.+||+|||+++.++.+... .....||..|++||.+.- .+.+.|.||||.|||+|+.+.|+.||......
T Consensus 611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ 690 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ 690 (775)
T ss_pred eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence 8999999999998766543 223468999999998753 34788999999999999999999999753321
Q ss_pred CcchhHh-hhhc---ccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCCC
Q 042457 300 NPKIMLI-DLLD---QRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPSL 360 (361)
Q Consensus 300 ~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~~ 360 (361)
. ..... .++. -..+....... +...+|++||++.-++|....++..||||.++.
T Consensus 691 Q-dILqeNTIlkAtEVqFP~KPvVss------eAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~ 748 (775)
T KOG1151|consen 691 Q-DILQENTILKATEVQFPPKPVVSS------EAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHI 748 (775)
T ss_pred H-HHHhhhchhcceeccCCCCCccCH------HHHHHHHHHHHhhhhhhhhHHHHccCccccchh
Confidence 1 11111 1111 11222112111 367889999999999999999999999998753
No 386
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-39 Score=299.79 Aligned_cols=249 Identities=25% Similarity=0.350 Sum_probs=194.4
Q ss_pred CCCcCeeeecCcee-EEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEEEEe
Q 042457 91 FDIKYCIGTGGYGS-VYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 91 ~~~~~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
|.-.+.+|.|+.|+ ||+|.+ +|+.||||++-... ..-..+|+..|+.- +||||+++++.-.+....|+..|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~-----~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL 584 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF-----FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL 584 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh-----HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence 34445689999874 899999 88999999986433 24556899999987 599999999999999999999999
Q ss_pred ccCCChhhhhccCCc-cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC---C--CCeEEeeecCccc
Q 042457 169 MRRGSLFCVLRNDDE-AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS---K--LEAFVADFGVARL 242 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---~--~~~kl~Dfg~~~~ 242 (361)
| ..+|.+++..... .....-...+.++.|++.||++||+. +|+||||||.|||++. + .+++|+|||+++.
T Consensus 585 C-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 585 C-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred h-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 9 5599999987411 11112144578899999999999998 9999999999999965 3 4688999999998
Q ss_pred cCCCCCC---cccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCC
Q 042457 243 LHSDSSN---RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPID 318 (361)
Q Consensus 243 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (361)
+..+... .....||.+|+|||++....-+.+.||||+||++|..++ |.+||.+....+. +++.+.......
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-----NIl~~~~~L~~L 735 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-----NILTGNYTLVHL 735 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-----hhhcCccceeee
Confidence 8765433 344679999999999998888889999999999999999 5999986543322 233332221111
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
.+.. +. +..+||.+|++++|..||++.+||.||+|=
T Consensus 736 ~~~~-d~--eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 736 EPLP-DC--EAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred ccCc-hH--HHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 0000 11 478899999999999999999999999993
No 387
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=269.00 Aligned_cols=260 Identities=25% Similarity=0.318 Sum_probs=202.3
Q ss_pred CCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEEEEEEec
Q 042457 92 DIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 92 ~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
+....||.|+||+|+|-.+ +.|+..|||+++....+.+ ..+++.|.+...+- +.||||+++|.+..++..|+-||.|
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~ke-q~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKE-QKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHH-HHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 3345599999999999955 4799999999988776444 46677787765554 7899999999999999999999999
Q ss_pred cCCChhhhhccC--CccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 170 RRGSLFCVLRND--DEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 170 ~~g~L~~~l~~~--~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
. .||..+...- -....+++.-.-.|......||.||-... .|+|||+||+|||+|..|.+||+|||++..+.. .
T Consensus 146 d-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~-S 221 (361)
T KOG1006|consen 146 D-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD-S 221 (361)
T ss_pred h-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH-H
Confidence 4 4665443221 11225778778888889999999999876 899999999999999999999999999976643 2
Q ss_pred CCccccccccccccccccc--ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHH
Q 042457 248 SNRTVVAGTHGYIAPELAY--TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQD 325 (361)
Q Consensus 248 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
...+...|...|||||.+. +..|+.+|||||||++|+|+.||..|+..... .-..+..+..+.++.........+.
T Consensus 222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~~~~~~~~~ 299 (361)
T KOG1006|consen 222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILLFDKECVHY 299 (361)
T ss_pred HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeecCccccccc
Confidence 2334456888999999875 33488999999999999999999999875443 2233444555555544333333334
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 326 IILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 326 ~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
...+..++.-|+-+|-++||+..+++++||++.
T Consensus 300 s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 300 SFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM 332 (361)
T ss_pred CHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence 456889999999999999999999999999864
No 388
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-38 Score=273.72 Aligned_cols=258 Identities=22% Similarity=0.333 Sum_probs=213.3
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 162 (361)
+-..+|.+...||+|+||.|.++..+ +.+.+|||+++.... +.+..+--+.|-++|... +-|.++++..+++..+.+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence 34456888999999999999999654 567899999987542 222345556677777766 578899999999999999
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
|.||||+.||+|--+++.-+ .+.+..+..++..||-||-+||++ +|+.||||..|||+|.+|.+||+|||+++.
T Consensus 426 yFVMEyvnGGDLMyhiQQ~G---kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVG---KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred eeEEEEecCchhhhHHHHhc---ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccc
Confidence 99999999999998888765 577888899999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhh
Q 042457 243 LHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTV 322 (361)
Q Consensus 243 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (361)
--.+.......+||+.|+|||++...+|+.+.|.||||++||||+.|++||+..+ .......+.+.....|...+
T Consensus 500 ni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD---E~elF~aI~ehnvsyPKslS-- 574 (683)
T KOG0696|consen 500 NIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED---EDELFQAIMEHNVSYPKSLS-- 574 (683)
T ss_pred cccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHHccCcCccccc--
Confidence 6556666777899999999999999999999999999999999999999988654 34445556555544333222
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCc-----cccccCCCCCC
Q 042457 323 IQDIILVSKIAFACLRSKPKSRPTM-----RRSFPNPEINP 358 (361)
Q Consensus 323 ~~~~~~l~~li~~cl~~dP~~RPs~-----~eil~hp~~~~ 358 (361)
.+...+++..+.+.|.+|... ++|-+||||+.
T Consensus 575 ----kEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~ 611 (683)
T KOG0696|consen 575 ----KEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR 611 (683)
T ss_pred ----HHHHHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence 236677788899999999854 57889999974
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-38 Score=277.90 Aligned_cols=256 Identities=23% Similarity=0.321 Sum_probs=210.5
Q ss_pred cCCCCcCeeeecCceeEEEEEeCCCC-EEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLPSGK-IVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~~~~-~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
.+++.+..||-|+||.|=++..++.. .+|+|.+++..- ...+.+....|-.+|...+.|.||++|-.|.+...+|++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45566677999999999999885444 388888866542 3344578889999999999999999999999999999999
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
|-|-||.|+..|++.+ .++......++..+.+|++|||.+ +|+.|||||+|.++|.+|-+||.|||+++.+...
T Consensus 500 EaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999999876 688889999999999999999999 9999999999999999999999999999998766
Q ss_pred CCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHH
Q 042457 247 SSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDI 326 (361)
Q Consensus 247 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
....+ .+||+.|.|||++.+...+.+.|.||||+++|||++|.+||...++.. ....++.+.-..... ....
T Consensus 574 ~KTwT-FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk---tYn~ILkGid~i~~P----r~I~ 645 (732)
T KOG0614|consen 574 RKTWT-FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK---TYNLILKGIDKIEFP----RRIT 645 (732)
T ss_pred Cceee-ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH---HHHHHHhhhhhhhcc----cccc
Confidence 55544 579999999999999999999999999999999999999988655422 222233222111111 1111
Q ss_pred HHHHHHHhhhcCCCCCCCCC-----ccccccCCCCCC
Q 042457 327 ILVSKIAFACLRSKPKSRPT-----MRRSFPNPEINP 358 (361)
Q Consensus 327 ~~l~~li~~cl~~dP~~RPs-----~~eil~hp~~~~ 358 (361)
....+|+++.+..+|.+|.- +.+|-.|-||..
T Consensus 646 k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 646 KTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred hhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence 23668888999999999986 788999999964
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-36 Score=254.38 Aligned_cols=260 Identities=23% Similarity=0.358 Sum_probs=214.1
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 163 (361)
.-++|.+...||+|+|..|..+++. +.+.+|+|++++.-- +.+.+.=.+.|-.+.... +||.+|-+..+++.+..++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 3467999999999999999999765 577899998875421 222234455677777766 7999999999999999999
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
+|.||++||+|--+++..+ .++++.++.+...|+-||.|||++ ||+.||||..|||+|..|.+||+|+|+++.-
T Consensus 328 fvieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence 9999999999988887766 689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcch-----hHhhhhcccCCCCCC
Q 042457 244 HSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKI-----MLIDLLDQRAPSPID 318 (361)
Q Consensus 244 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 318 (361)
-.+.......+||+.|.|||++.+..|....|.|++|++|+||+.|+.||+.....+++. ...-+++.+...|..
T Consensus 402 l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprs 481 (593)
T KOG0695|consen 402 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRS 481 (593)
T ss_pred CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccce
Confidence 666677778899999999999999999999999999999999999999998655433322 233444444444433
Q ss_pred ChhhHHHHHHHHHHHhhhcCCCCCCCC------CccccccCCCCCC
Q 042457 319 DQTVIQDIILVSKIAFACLRSKPKSRP------TMRRSFPNPEINP 358 (361)
Q Consensus 319 ~~~~~~~~~~l~~li~~cl~~dP~~RP------s~~eil~hp~~~~ 358 (361)
.+. ....+++.-|++||.+|. .+.++-.|+||+.
T Consensus 482 lsv------kas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~ 521 (593)
T KOG0695|consen 482 LSV------KASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS 521 (593)
T ss_pred eeh------hhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence 222 255677789999999997 4678999999973
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-35 Score=268.87 Aligned_cols=257 Identities=21% Similarity=0.330 Sum_probs=198.3
Q ss_pred CCCCcCeeeecCceeEEEEE-eCCCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQ-LPSGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
-|..++.||-|+||+|.+++ .++...+|.|.+.+.+- ...+......|-++|...+.+-||++|-.|++.+++|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 36667889999999999994 44567899999876543 33345678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC--
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS-- 245 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~-- 245 (361)
|++||++-++|-+-+ .+.+..++.++..+..|+++.|.. |++||||||+|||+|.+|.+||+|||+|.-+.-
T Consensus 710 YIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred ccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999887655 688888999999999999999999 999999999999999999999999999865420
Q ss_pred -C-----CC-C---------------------------------cccccccccccccccccccccCccchhhhHHHHHHH
Q 042457 246 -D-----SS-N---------------------------------RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALE 285 (361)
Q Consensus 246 -~-----~~-~---------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~e 285 (361)
. .. . ....+||+.|+|||++....++..+|.||.|+||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 0 00 0 011358999999999999999999999999999999
Q ss_pred HHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCC---CccccccCCCCCC
Q 042457 286 VLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRP---TMRRSFPNPEINP 358 (361)
Q Consensus 286 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~eil~hp~~~~ 358 (361)
|+.|+.||.............++. ..+..+.......+....+.+ .|+ +++.|. -.+||-.||||+.
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~-~~l~~~~~~~ls~e~~~li~k---Lc~--sad~RLGkng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWR-NFLHIPYQGNLSKEALDLIQK---LCC--SADSRLGKNGADQVKAHPFFKG 933 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehh-hccccccccccCHHHHHHHHH---Hhc--ChhhhhcccchhhhhcCccccc
Confidence 999999998766544333322222 122222222222333223322 243 345554 4667999999985
No 392
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=257.36 Aligned_cols=133 Identities=23% Similarity=0.467 Sum_probs=112.5
Q ss_pred hcCCCCcCeeeecCceeEEEEE-eCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-----C---CcceeeeEEEee
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQ-LPSGKIVALKKLHHSETELAFLESFQTEARLLSQIR-----H---RNIVKLYGFCLH 158 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~~~ 158 (361)
..+|-+.++||.|-|++||++. ..+.+.||+|+.+... .+.+..+.|+++|++++ | ..||++++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh---HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 3788999999999999999994 4577899999987543 23466789999999884 3 369999999986
Q ss_pred C----CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeC
Q 042457 159 K----KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLN 227 (361)
Q Consensus 159 ~----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~ 227 (361)
. .++|+|+|+. |.+|..++.....+ -++...+.+|+.||+.||.|||..| +|+|.||||+|||+.
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~Yr-Glpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYR-GLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 4 4799999998 77888888765543 4888999999999999999999998 999999999999993
No 393
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=2.9e-35 Score=262.77 Aligned_cols=270 Identities=19% Similarity=0.249 Sum_probs=209.0
Q ss_pred CHHHHHHHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC------CCcceee
Q 042457 80 TFEEIIVATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIR------HRNIVKL 152 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~ 152 (361)
.+.-.+....+|.+....|+|-|++|.+|... .|+.||||++...... .+.=+.|+++|++|+ --|++++
T Consensus 423 rv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M---~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 423 RVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM---HKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred EEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH---hhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 33444567789999999999999999999654 5789999999876532 244458999999995 2479999
Q ss_pred eEEEeeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC-CC
Q 042457 153 YGFCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK-LE 231 (361)
Q Consensus 153 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-~~ 231 (361)
+-.|.+.+++|||+|.. ..+|.+.|...+....|....+..++.|+.-||..|-.. +++|.||||.||||++. ..
T Consensus 500 ~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~i 575 (752)
T KOG0670|consen 500 FRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNI 575 (752)
T ss_pred HHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcce
Confidence 99999999999999987 569999999887777788999999999999999999998 99999999999999876 45
Q ss_pred eEEeeecCccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccC------------
Q 042457 232 AFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSF------------ 299 (361)
Q Consensus 232 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~------------ 299 (361)
+||||||.|.....+. .+.+.-+.-|.|||++.|..|+...|+||.||.||||.||+..|......
T Consensus 576 LKLCDfGSA~~~~ene--itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk 653 (752)
T KOG0670|consen 576 LKLCDFGSASFASENE--ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGK 653 (752)
T ss_pred eeeccCcccccccccc--ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCC
Confidence 7999999997664332 22233456799999999999999999999999999999999887644321
Q ss_pred ----------------CcchhH----hhhhccc---------CC----------CCCCChhhHHHHHHHHHHHhhhcCCC
Q 042457 300 ----------------NPKIML----IDLLDQR---------AP----------SPIDDQTVIQDIILVSKIAFACLRSK 340 (361)
Q Consensus 300 ----------------~~~~~~----~~~~~~~---------~~----------~~~~~~~~~~~~~~l~~li~~cl~~d 340 (361)
+..... .+-+.++ .| ...........+..+.+|+.+|+..|
T Consensus 654 ~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~Ld 733 (752)
T KOG0670|consen 654 FPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILD 733 (752)
T ss_pred CcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccC
Confidence 000000 0000000 00 00000111233456889999999999
Q ss_pred CCCCCCccccccCCCCCC
Q 042457 341 PKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 341 P~~RPs~~eil~hp~~~~ 358 (361)
|++|.|..|.|+||||+.
T Consensus 734 P~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 734 PEKRITVNQALKHPFITE 751 (752)
T ss_pred hhhcCCHHHHhcCCcccC
Confidence 999999999999999975
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-36 Score=248.50 Aligned_cols=259 Identities=25% Similarity=0.327 Sum_probs=198.7
Q ss_pred CcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC-----eEEEEE
Q 042457 93 IKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK-----CMFLIY 166 (361)
Q Consensus 93 ~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~ 166 (361)
-.+.||.|+||.||..+. .+|+.||+|++..-......-+.+.+|++++..++|.|++..++..+-.. ++|+++
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 345699999999999965 47999999998766554444577889999999999999999998877543 467888
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
|.| ..+|...+-+.. .++-..+.-++.||++||.|||+. +|.||||||.|.|++.|...||+|||+++.-+.+
T Consensus 137 ELm-QSDLHKIIVSPQ---~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 137 ELM-QSDLHKIIVSPQ---ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHH-HhhhhheeccCC---CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchh
Confidence 888 558888877655 688888999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-Cccccccccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhh---------------
Q 042457 247 SS-NRTVVAGTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLL--------------- 309 (361)
Q Consensus 247 ~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--------------- 309 (361)
.. ..+..+-|..|.|||++++. .|+.+.||||.||++.|++..+..|...+.........+.+
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGA 289 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGA 289 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhh
Confidence 32 33445578899999999874 58999999999999999999888887555432222222211
Q ss_pred -----cccCCCCCCC-----hhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 310 -----DQRAPSPIDD-----QTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 310 -----~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
......+... ........+...+..+++..||.+|.+..+.+.|+++.+
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 1111111100 000011123456777899999999999999999999865
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=2.6e-35 Score=238.22 Aligned_cols=257 Identities=19% Similarity=0.341 Sum_probs=196.8
Q ss_pred HhcCCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeC--CeE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGFCLHK--KCM 162 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~ 162 (361)
..++|++.+++|+|.+++||.| ...+++.++||+++... .+.+.+|+.+|+.+. ||||+++++...+. ...
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence 3567889999999999999999 45678899999998654 367889999999996 99999999998875 457
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC-CCeEEeeecCcc
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK-LEAFVADFGVAR 241 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfg~~~ 241 (361)
.||+||..+.+...+.. .++...+...+.+++.||.|+|+. ||.|||+||.|+++|.. -..+|+|+|+|.
T Consensus 111 aLiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred hhHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHh
Confidence 89999999988776654 577788999999999999999999 99999999999999875 468999999998
Q ss_pred ccCCCCCCcccccccccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCC-cccCCcchhH--------------
Q 042457 242 LLHSDSSNRTVVAGTHGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDL-LSSFNPKIML-------------- 305 (361)
Q Consensus 242 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~-~~~~~~~~~~-------------- 305 (361)
.+..... ....+.+..|.-||.+-. ..|+..-|+|||||++..|+..+.||-. .+..++....
T Consensus 182 FYHp~~e-YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 182 FYHPGKE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN 260 (338)
T ss_pred hcCCCce-eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence 8765433 333446667889998754 5678899999999999999999988742 2222111111
Q ss_pred ----------hhhhcccCCCCCC---ChhhHH-HHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 306 ----------IDLLDQRAPSPID---DQTVIQ-DIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 306 ----------~~~~~~~~~~~~~---~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.+++......+.. .+.... ...+..+++.+.|.+|-.+|||++|.+.||||..
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 1111111100000 000000 0135788999999999999999999999999975
No 396
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=247.55 Aligned_cols=259 Identities=25% Similarity=0.317 Sum_probs=194.9
Q ss_pred hcCCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC------
Q 042457 88 TEDFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK------ 160 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 160 (361)
..+|.-.+.+|.|.. .|..+ ..-.++.||+|++..........+...+|..++..+.|+|+++++.++.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 345666667888887 55555 3336889999988655332333466778999999999999999999997543
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
..|+|||+|. .+|...+.. .++-..+..+..|++.|+.|||+. +|+||||||+||++..+..+||.|||++
T Consensus 95 e~y~v~e~m~-~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVILM-----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhhh-hHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 5799999994 588777762 477788999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhh-------------
Q 042457 241 RLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLID------------- 307 (361)
Q Consensus 241 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~------------- 307 (361)
+.-... ...+..+.|..|.|||++.+..+.+..||||+||++.||++|+.-|.+....+......+
T Consensus 166 r~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 166 RTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred cccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 764433 345556788899999999998899999999999999999999988764332111110000
Q ss_pred ------hhcc-----------cCC---CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 308 ------LLDQ-----------RAP---SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 308 ------~~~~-----------~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
.... ..+ .+...+........+.+++.+||-.||++|.|++++|+||||+
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 0000 000 0000001111233478899999999999999999999999997
No 397
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-35 Score=268.31 Aligned_cols=261 Identities=27% Similarity=0.457 Sum_probs=212.9
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 165 (361)
...+|.....+|.|.||.|||++. ..++..|+|+++...... .....+|+-+++..+|+||+.++|.+...+..++.
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd--~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD--FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc--ccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 456788899999999999999954 478999999998765433 46677899999999999999999999999999999
Q ss_pred EEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 166 YKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 166 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
||||.+|+|.+..+-.. ++++.++...++...+|++|||+. +-+|||||-.|||+++.+.+|++|||.+..+..
T Consensus 91 MEycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 99999999999887665 689999999999999999999999 889999999999999999999999999987766
Q ss_pred CCCCcccccccccccccccc---cccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhc-ccCCCCCCChh
Q 042457 246 DSSNRTVVAGTHGYIAPELA---YTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLD-QRAPSPIDDQT 321 (361)
Q Consensus 246 ~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 321 (361)
.-..+....||+.|||||+. ..+.|...+|||+.|+...|+---+.|--+. .+...+.-... ...+....+..
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl---hpmr~l~LmTkS~~qpp~lkDk~ 241 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL---HPMRALFLMTKSGFQPPTLKDKT 241 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc---chHHHHHHhhccCCCCCcccCCc
Confidence 55666777899999999975 3567889999999999999998777762211 11111111111 11122222222
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCCC
Q 042457 322 VIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPSL 360 (361)
Q Consensus 322 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~~ 360 (361)
.+.. .+-++++.|+.++|++|||++.+|+|||+.+.+
T Consensus 242 kws~--~fh~fvK~altknpKkRptaeklL~h~fvs~~l 278 (829)
T KOG0576|consen 242 KWSE--FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTL 278 (829)
T ss_pred cchH--HHHHHHHHHhcCCCccCCChhhheeceeeccch
Confidence 3333 578999999999999999999999999998753
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=100.00 E-value=2e-32 Score=232.11 Aligned_cols=212 Identities=33% Similarity=0.589 Sum_probs=185.4
Q ss_pred eeecCceeEEEEEeCC-CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCChh
Q 042457 97 IGTGGYGSVYRAQLPS-GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLF 175 (361)
Q Consensus 97 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~ 175 (361)
||+|++|.||++...+ |+.+++|.+....... ..+.+.+|+..++.++|++++++++++......++++|++++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999998754 8999999998765432 2467889999999999999999999999999999999999999999
Q ss_pred hhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC-CCCeEEeeecCccccCCCCCCccccc
Q 042457 176 CVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS-KLEAFVADFGVARLLHSDSSNRTVVA 254 (361)
Q Consensus 176 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~ 254 (361)
+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+..............
T Consensus 80 ~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (215)
T cd00180 80 DLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV 154 (215)
T ss_pred HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhccc
Confidence 9987653 2588999999999999999999999 9999999999999999 89999999999986654332233345
Q ss_pred cccccccccccccc-ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHH
Q 042457 255 GTHGYIAPELAYTM-VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIA 333 (361)
Q Consensus 255 gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 333 (361)
+...|++||..... ..+.++|+|++|++++++ ..+.+++
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------~~~~~~l 194 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------PELKDLI 194 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------HHHHHHH
Confidence 77889999998776 788999999999999999 2588999
Q ss_pred hhhcCCCCCCCCCccccccCC
Q 042457 334 FACLRSKPKSRPTMRRSFPNP 354 (361)
Q Consensus 334 ~~cl~~dP~~RPs~~eil~hp 354 (361)
.+|++.+|++||++.++++|+
T Consensus 195 ~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 195 RKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHhhCCcccCcCHHHHhhCC
Confidence 999999999999999999875
No 399
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=225.02 Aligned_cols=222 Identities=25% Similarity=0.362 Sum_probs=173.3
Q ss_pred HHHHhcCCCCcCeeeecCceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCe
Q 042457 84 IIVATEDFDIKYCIGTGGYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKC 161 (361)
Q Consensus 84 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 161 (361)
+++..+...-...||+|++|.|-+-++ .+|+..|+|++...-.... .+..+.|+++..+. .+|.+|.++|.......
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~-q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQE-QKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHH-HHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 344555555567799999999988854 5899999999987765444 45667788876654 79999999999999999
Q ss_pred EEEEEEeccCCChhhhhccC-CccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 162 MFLIYKYMRRGSLFCVLRND-DEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 162 ~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
.++.||.| ..||..+.++. .....+++.-+-+|+..+..||.|||++. .++|||+||+|||++.+|++|+||||++
T Consensus 120 vwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccc
Confidence 99999999 45776665431 11226788889999999999999999986 8999999999999999999999999998
Q ss_pred cccCCCCCCccccccccccccccccc----ccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhccc
Q 042457 241 RLLHSDSSNRTVVAGTHGYIAPELAY----TMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQR 312 (361)
Q Consensus 241 ~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 312 (361)
..+.. .-..+...|...|||||.+. ...|+.++||||||+.+.||.+++.||+.- ..+-..+..+++..
T Consensus 197 G~L~d-SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w--~tpF~qLkqvVeep 269 (282)
T KOG0984|consen 197 GYLVD-SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW--GTPFQQLKQVVEEP 269 (282)
T ss_pred eeehh-hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc--CCHHHHHHHHhcCC
Confidence 76643 22333456888999999875 346889999999999999999999998732 23333444444443
No 400
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=4.2e-32 Score=273.31 Aligned_cols=200 Identities=18% Similarity=0.218 Sum_probs=144.2
Q ss_pred cCCC-CcceeeeEEE-------eeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCe
Q 042457 143 QIRH-RNIVKLYGFC-------LHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSI 214 (361)
Q Consensus 143 ~l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i 214 (361)
.++| +||++++++| .+....+.++|++ +++|.+++.... ..+++.+++.++.||++||+|||++ +|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 3445 5788888877 2334577888887 669999997543 2589999999999999999999999 99
Q ss_pred EEeCCCCCCeeeCCC-------------------CCeEEeeecCccccCCCC----------------CCcccccccccc
Q 042457 215 VHRDISSNNILLNSK-------------------LEAFVADFGVARLLHSDS----------------SNRTVVAGTHGY 259 (361)
Q Consensus 215 ~H~dlk~~Nill~~~-------------------~~~kl~Dfg~~~~~~~~~----------------~~~~~~~gt~~y 259 (361)
+||||||+||||+.. +.+|++|||+++...... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 999999999999654 445566666654321100 001113478889
Q ss_pred cccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCC
Q 042457 260 IAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRS 339 (361)
Q Consensus 260 ~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 339 (361)
+|||++.+..++.++|||||||+||||++|..|+..... ..........+... .........++.+||++
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~L~~ 251 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-----TMSSLRHRVLPPQI-----LLNWPKEASFCLWLLHP 251 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-----HHHHHHHhhcChhh-----hhcCHHHHHHHHHhCCC
Confidence 999999999999999999999999999999988653211 11111111111110 11112356778899999
Q ss_pred CCCCCCCccccccCCCCCC
Q 042457 340 KPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 340 dP~~RPs~~eil~hp~~~~ 358 (361)
||.+|||+.|+++||||++
T Consensus 252 ~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 252 EPSCRPSMSELLQSEFINE 270 (793)
T ss_pred ChhhCcChHHHhhchhhhh
Confidence 9999999999999999975
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=2.8e-30 Score=221.70 Aligned_cols=199 Identities=36% Similarity=0.556 Sum_probs=172.1
Q ss_pred CCCcCeeeecCceeEEEEEeCC-CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEec
Q 042457 91 FDIKYCIGTGGYGSVYRAQLPS-GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
|.+.+.||+|++|.||++...+ ++.+++|.+...... ...+.+.+|++.+++++|+|++++++++......++++|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 4567889999999999998765 889999999866543 23578889999999999999999999999999999999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC-C
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-S 248 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 248 (361)
++++|.+++..... .+++.....++.+++.++.+||+. +++|+|++|+||+++.++.++|+|||.+....... .
T Consensus 80 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 80 EGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred CCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 99999999876542 178999999999999999999999 99999999999999999999999999988765442 1
Q ss_pred Ccccccccccccccccc-cccccCccchhhhHHHHHHHHHhCCCCCCC
Q 042457 249 NRTVVAGTHGYIAPELA-YTMVVTEKCDVFGFGVVALEVLMGRHPGDL 295 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 295 (361)
......++..|++||.+ ....++.++|+|+||++++||++|+.||..
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 22334577889999988 667778899999999999999999999854
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=9.8e-32 Score=235.35 Aligned_cols=262 Identities=25% Similarity=0.372 Sum_probs=197.5
Q ss_pred HHHHhcCCCCcCeeeecCceeEEEEEeC----CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEee
Q 042457 84 IIVATEDFDIKYCIGTGGYGSVYRAQLP----SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLH 158 (361)
Q Consensus 84 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 158 (361)
+....+.|..+++||+|.|++||++... .++.||+|.+...... ..+..|+++|..+ .+.||+++.+++..
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p----~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP----SRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc----hHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 3445677899999999999999999543 4678999998766543 5578999999998 58999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC-CCeEEeee
Q 042457 159 KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK-LEAFVADF 237 (361)
Q Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-~~~kl~Df 237 (361)
++...+|+||+++....+++. .++...+...++.+..||+++|.. ||+|||+||+|+|.+.. +.-.|.||
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDF 177 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDF 177 (418)
T ss_pred CCeeEEEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEec
Confidence 999999999999999988886 467889999999999999999999 99999999999999766 45789999
Q ss_pred cCccccCCCC--------------C------------------------------Ccccccccccccccccccc-cccCc
Q 042457 238 GVARLLHSDS--------------S------------------------------NRTVVAGTHGYIAPELAYT-MVVTE 272 (361)
Q Consensus 238 g~~~~~~~~~--------------~------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~ 272 (361)
|++....... . ......||++|.|||++.. ...+.
T Consensus 178 gLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtt 257 (418)
T KOG1167|consen 178 GLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTT 257 (418)
T ss_pred hhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCC
Confidence 9987221000 0 0011248999999998764 55688
Q ss_pred cchhhhHHHHHHHHHhCCCCCCCcccCCc------------chhHhhhhccc---------------------------C
Q 042457 273 KCDVFGFGVVALEVLMGRHPGDLLSSFNP------------KIMLIDLLDQR---------------------------A 313 (361)
Q Consensus 273 ~~Dv~slG~~l~el~tg~~p~~~~~~~~~------------~~~~~~~~~~~---------------------------~ 313 (361)
+.||||.|+|++-+++++.||-...+... .........++ .
T Consensus 258 aiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~ 337 (418)
T KOG1167|consen 258 AIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIY 337 (418)
T ss_pred ccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcc
Confidence 99999999999999999999843222100 00000000000 0
Q ss_pred CCCC--CChhhHHH--HHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 314 PSPI--DDQTVIQD--IILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 314 ~~~~--~~~~~~~~--~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.... .....+.+ ...+.+++.+|+..||.+|.|+++.|+||||.+
T Consensus 338 ~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 338 KSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred cccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 0000 00000011 125789999999999999999999999999975
No 403
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-31 Score=239.44 Aligned_cols=198 Identities=25% Similarity=0.354 Sum_probs=167.2
Q ss_pred cCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc--hHH----HHHHHHHHHHHHhcCC---CCcceeeeEEEee
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET--ELA----FLESFQTEARLLSQIR---HRNIVKLYGFCLH 158 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~----~~~~~~~e~~~l~~l~---h~niv~~~~~~~~ 158 (361)
.+|...+.+|+|+||.|+.+.++ +...|+||.+.+..- +.+ .+-..-.|+.+|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 35788899999999999999765 456799998876532 111 1123557999999997 9999999999999
Q ss_pred CCeEEEEEEec-cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeee
Q 042457 159 KKCMFLIYKYM-RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADF 237 (361)
Q Consensus 159 ~~~~~lv~e~~-~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 237 (361)
++.+||+||-. ++-+|++++.... .+++.....|++||+.|+++||+. +|+|||||-+||.++.+|-+||+||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeec
Confidence 99999999965 4558999998765 689999999999999999999999 9999999999999999999999999
Q ss_pred cCccccCCCCCCccccccccccccccccccccc-CccchhhhHHHHHHHHHhCCCCCC
Q 042457 238 GVARLLHSDSSNRTVVAGTHGYIAPELAYTMVV-TEKCDVFGFGVVALEVLMGRHPGD 294 (361)
Q Consensus 238 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~ 294 (361)
|.+....+.+ .....||..|.|||++.+..| ....|||++|++||.++....||-
T Consensus 715 gsaa~~ksgp--fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSGP--FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCCC--cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9987554333 345679999999999998876 457899999999999999888864
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=3.3e-30 Score=213.23 Aligned_cols=166 Identities=19% Similarity=0.170 Sum_probs=127.3
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|+|.++++..+. .+++.+++.++.|++.||.|||+. + ||+|||++.++.+++ ||++.......
T Consensus 1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 688899876432 589999999999999999999998 5 999999999999999 99987654322
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCC---CChhhHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPI---DDQTVIQDIIL 328 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 328 (361)
..||+.|+|||++.+..++.++|||||||++|||+||+.||....... ............... ...........
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNGMPADDPRDRSNLESVSAARS 140 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHHhccCCccccccHHHHHhhhh
Confidence 257899999999999999999999999999999999999986543321 112222222111111 11111111125
Q ss_pred HHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 329 VSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 329 l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
+.+++.+||+.||.+|||+.|+++|+|+.
T Consensus 141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 141 FADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 89999999999999999999999999874
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=215.20 Aligned_cols=244 Identities=20% Similarity=0.321 Sum_probs=182.6
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeE-EEeeCCeEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYG-FCLHKKCMF 163 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~-~~~~~~~~~ 163 (361)
..+.|.+.+.||+|.||.+-+++++ +.+.+++|.+...... .++|.+|...--.+ .|.||+.-|+ .|+..+.+.
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt---~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT---QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh---HHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 3456888999999999999999765 5788999998776544 47888888776666 4899998776 466778889
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeC--CCCCeEEeeecCcc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLN--SKLEAFVADFGVAR 241 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~--~~~~~kl~Dfg~~~ 241 (361)
+++||++.|+|.+-+...+ +.+....+++.|++.|+.|||+. ++||||||.+|||+- +..++||+|||+.+
T Consensus 99 F~qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred EeeccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccc
Confidence 9999999999998776643 77888899999999999999999 999999999999993 34579999999987
Q ss_pred ccCCCCCCccccccccccccccccccc-----ccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCC
Q 042457 242 LLHSDSSNRTVVAGTHGYIAPELAYTM-----VVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSP 316 (361)
Q Consensus 242 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 316 (361)
.....- .....+..|.+||..... ...+.+|+|.||++++.++||+.||......++.........++....
T Consensus 172 k~g~tV---~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~ 248 (378)
T KOG1345|consen 172 KVGTTV---KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPA 248 (378)
T ss_pred ccCcee---hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCcc
Confidence 543221 112235578999976432 346789999999999999999999986555555554443333332221
Q ss_pred CCChhhHHHHHHHHHHHhhhcCCCCCCC
Q 042457 317 IDDQTVIQDIILVSKIAFACLRSKPKSR 344 (361)
Q Consensus 317 ~~~~~~~~~~~~l~~li~~cl~~dP~~R 344 (361)
..... ..-...+.++.++-+.++|++|
T Consensus 249 ~P~~F-~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 249 LPKKF-NPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred Cchhh-cccCHHHHHHHHHhcCCccccc
Confidence 11110 0111236677778888999888
No 406
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.2e-29 Score=205.87 Aligned_cols=243 Identities=21% Similarity=0.325 Sum_probs=186.9
Q ss_pred CCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEecc
Q 042457 91 FDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMR 170 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 170 (361)
..+..+|.+...|+.|+|+|+ |..++.|++....-+...-++|..|.-.++-+.||||++++|.|....++.++..||+
T Consensus 192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 344556889999999999995 4557778887766655556789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEe--eecCccccCCCCC
Q 042457 171 RGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVA--DFGVARLLHSDSS 248 (361)
Q Consensus 171 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~--Dfg~~~~~~~~~~ 248 (361)
.|+|++.|+.... ...+..+..+++.++|+|++|||+.. +-|.-.-|++..+++|++.+.+|+ |-.++..
T Consensus 271 ~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfq------ 342 (448)
T KOG0195|consen 271 FGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ------ 342 (448)
T ss_pred chHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeee------
Confidence 9999999987643 35788899999999999999999873 234455789999999999988873 3222211
Q ss_pred Cccccccccccccccccccccc---CccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc-cCCCCCCChhhHH
Q 042457 249 NRTVVAGTHGYIAPELAYTMVV---TEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ-RAPSPIDDQTVIQ 324 (361)
Q Consensus 249 ~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 324 (361)
.....-.+.||+||.+...+. -.++|+|||++++|||.|...||.+.+..+..... .+++ +...|....
T Consensus 343 -e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki--aleglrv~ippgis---- 415 (448)
T KOG0195|consen 343 -EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI--ALEGLRVHIPPGIS---- 415 (448)
T ss_pred -ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh--hhccccccCCCCcc----
Confidence 111224678999999876653 35899999999999999999999887765433221 1111 111222211
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCccccc
Q 042457 325 DIILVSKIAFACLRSKPKSRPTMRRSF 351 (361)
Q Consensus 325 ~~~~l~~li~~cl~~dP~~RPs~~eil 351 (361)
..+.+|+.-|++.||.+||.+..|+
T Consensus 416 --~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 416 --RHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred --HHHHHHHHHHhcCCCCcCCCcceeh
Confidence 1478899999999999999999886
No 407
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=4.8e-28 Score=232.49 Aligned_cols=259 Identities=20% Similarity=0.287 Sum_probs=194.3
Q ss_pred CcCeeeecCceeEEEEEe-CCCCEEEEEEec----cCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 93 IKYCIGTGGYGSVYRAQL-PSGKIVALKKLH----HSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 93 ~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~----~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
....+|.|++|.|+.... ......+.|... ...........+..|+-+-..+.|+|++..+..+.+.....-.||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 456799999998877743 344445555433 333333333447788888889999999888887777666666699
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
||++ +|..++.... .++..++..++.|+..|++|||.. |+.|||+|++|++++.++.+||+|||.+.....+.
T Consensus 402 ~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred cccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 9999 9999998763 578888999999999999999999 99999999999999999999999999998765443
Q ss_pred CC----cccccccccccccccccccccCc-cchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhh
Q 042457 248 SN----RTVVAGTHGYIAPELAYTMVVTE-KCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTV 322 (361)
Q Consensus 248 ~~----~~~~~gt~~y~aPE~~~~~~~~~-~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (361)
.. .....|+..|+|||.+.+..|.+ ..||||.|+++..|++|+.||......+..........+...........
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLL 554 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHH
Confidence 32 34456899999999999888876 68999999999999999999976554433211111111111111111111
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 323 IQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 323 ~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.........++-++|+.||.+|.|+++|++.+||+.
T Consensus 555 ~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~ 590 (601)
T KOG0590|consen 555 SLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRS 590 (601)
T ss_pred HhchhhHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence 222344678889999999999999999999999986
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=1.2e-25 Score=203.08 Aligned_cols=166 Identities=19% Similarity=0.151 Sum_probs=128.6
Q ss_pred HHHhcCCCCcCeeeecCceeEEEEEeC--CCCEEEEEEeccCcc---hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeC
Q 042457 85 IVATEDFDIKYCIGTGGYGSVYRAQLP--SGKIVALKKLHHSET---ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHK 159 (361)
Q Consensus 85 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 159 (361)
.....+|.+.+.||+|+||+||+|... +++.||||++..... .....+.+.+|++++++++|+|+++.+.. .
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~ 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence 355678999999999999999999764 577889998753311 22234678999999999999999853322 2
Q ss_pred CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCC-CCCCeeeCCCCCeEEeeec
Q 042457 160 KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDI-SSNNILLNSKLEAFVADFG 238 (361)
Q Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dl-k~~Nill~~~~~~kl~Dfg 238 (361)
+..++||||++|++|... .. .. ...++.+++++|.|||+. +|+|||| ||+|||++.++.++|+|||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RP------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cc------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 457999999999999632 11 11 146789999999999999 9999999 9999999999999999999
Q ss_pred CccccCCCCCC--------ccccccccccccccccc
Q 042457 239 VARLLHSDSSN--------RTVVAGTHGYIAPELAY 266 (361)
Q Consensus 239 ~~~~~~~~~~~--------~~~~~gt~~y~aPE~~~ 266 (361)
+++.+...... -....+++.|+|||.+.
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 99876543211 12345778899999875
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=2.9e-24 Score=194.68 Aligned_cols=263 Identities=29% Similarity=0.432 Sum_probs=201.8
Q ss_pred CCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHH-HHHHHHHHHHHHhcCCCC-cceeeeEEEeeCCeEEEEEEe
Q 042457 91 FDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELA-FLESFQTEARLLSQIRHR-NIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~ 168 (361)
|.+...||.|+||.||++... ..+++|.+........ ....+.+|...++.+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999876 7899999877655432 467899999999999988 799999999877778999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC-CeEEeeecCccccCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL-EAFVADFGVARLLHSDS 247 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~~ 247 (361)
+.++++.+++........+.......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997766543112578889999999999999999999 999999999999999998 79999999998554433
Q ss_pred C------Ccccccccccccccccccc---cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC-C---
Q 042457 248 S------NRTVVAGTHGYIAPELAYT---MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA-P--- 314 (361)
Q Consensus 248 ~------~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~--- 314 (361)
. ......|+..|+|||.+.+ ...+...|+||+|++++++++|..||.................... +
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence 2 2355679999999999887 5788899999999999999999999665442100111111111111 1
Q ss_pred CCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 315 SPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
..............+.+++..|+..+|..|.+..+...+++...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 280 (384)
T COG0515 237 SPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH 280 (384)
T ss_pred cccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence 11111000111234778888999999999999999888866543
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-24 Score=197.01 Aligned_cols=202 Identities=22% Similarity=0.315 Sum_probs=164.3
Q ss_pred CCCCcCeeeecCceeEEEEEeCCC--CEEEEEEeccCcchHHHHHHHHHHHHHHhcCCC----CcceeeeEEE-eeCCeE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLPSG--KIVALKKLHHSETELAFLESFQTEARLLSQIRH----RNIVKLYGFC-LHKKCM 162 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~-~~~~~~ 162 (361)
+|.+.+.||+|+||.||.+...+. ..+|+|.-........ ..+..|..++..+.. .++..+++.. ......
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 799999999999999999976543 4788888765433211 146678888887762 5888888888 477788
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC-----CCeEEeee
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK-----LEAFVADF 237 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-----~~~kl~Df 237 (361)
++||+.+ |.+|.++..... ...++..+..+++.|++.+|.+||+. |++||||||.|+++... ..+.|.||
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 9999987 889999876554 44799999999999999999999999 99999999999999765 45899999
Q ss_pred cCcc--ccCCCCC--------CcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCccc
Q 042457 238 GVAR--LLHSDSS--------NRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSS 298 (361)
Q Consensus 238 g~~~--~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 298 (361)
|+++ ....... ......||.+|++++...+...+.+.|+||++.++.|++.|..||.....
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~ 242 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM 242 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence 9998 3321111 12234599999999999999999999999999999999999999976554
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=7.1e-25 Score=179.11 Aligned_cols=219 Identities=18% Similarity=0.297 Sum_probs=179.5
Q ss_pred HHhcCCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCC-CcceeeeEEEeeCCeEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRH-RNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~ 163 (361)
+....|.++++||.|+||.+|.| ...+|..||||.-...... ..+.-|..+.+.+++ ..|..+..+..+...-.
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 34567999999999999999999 4568999999987665543 345678888888875 67888888888888899
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC---CCeEEeeecCc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK---LEAFVADFGVA 240 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~---~~~kl~Dfg~~ 240 (361)
+||+.. |.+|++++.-... .++..+.+-++-|++.-++|+|.+ +++||||||+|+|..-+ .++.++|||++
T Consensus 88 lVMdLL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa 161 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLA 161 (341)
T ss_pred eeeecc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccch
Confidence 999988 8899999876654 588999999999999999999999 99999999999999654 56789999999
Q ss_pred cccCCCCCC-------cccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccC
Q 042457 241 RLLHSDSSN-------RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRA 313 (361)
Q Consensus 241 ~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 313 (361)
+.+...... .....||.+|.+-....+...+...|+=|+|.+|..+--|..||..............+.+...
T Consensus 162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~ 241 (341)
T KOG1163|consen 162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKM 241 (341)
T ss_pred hhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhc
Confidence 877543321 2335699999999988888889999999999999999999999998776554444455555444
Q ss_pred C
Q 042457 314 P 314 (361)
Q Consensus 314 ~ 314 (361)
.
T Consensus 242 s 242 (341)
T KOG1163|consen 242 S 242 (341)
T ss_pred C
Confidence 3
No 412
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.91 E-value=2.2e-25 Score=215.28 Aligned_cols=245 Identities=22% Similarity=0.323 Sum_probs=179.4
Q ss_pred CCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHH--HhcCCCCcceeeeEEEeeCCeEEEEEE
Q 042457 90 DFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARL--LSQIRHRNIVKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~~~~~~~lv~e 167 (361)
++...+.||.+.|=+|.+|+.++|. |+||++-....+.. ++.|.++++- ...++|||.+++.-+-......|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~s-L~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTIS-LRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCC-chHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 6777888999999999999998888 99999876653221 2333333333 455689999999888777888899999
Q ss_pred eccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC--
Q 042457 168 YMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS-- 245 (361)
Q Consensus 168 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~-- 245 (361)
|..+ +|+|.+.... -+...+...|+.|++.|+.-+|.. +|+|||||.+|||++.-+.+.|+||..-+...-
T Consensus 102 yvkh-nLyDRlSTRP---FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP---FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccch---HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9855 8998887654 477788899999999999999999 999999999999999999999999987643321
Q ss_pred C-CCCccc----cccccccccccccccc-----------ccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhh
Q 042457 246 D-SSNRTV----VAGTHGYIAPELAYTM-----------VVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDL 308 (361)
Q Consensus 246 ~-~~~~~~----~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 308 (361)
+ +..... ...-..|.|||.+... ..+++.||||+||++.||++ |++||+... .
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ----------L 244 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ----------L 244 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH----------H
Confidence 1 111111 1233469999976431 15679999999999999999 899987321 1
Q ss_pred hcccCCCCCCChhhHHHH--HHHHHHHhhhcCCCCCCCCCccccccC
Q 042457 309 LDQRAPSPIDDQTVIQDI--ILVSKIAFACLRSKPKSRPTMRRSFPN 353 (361)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~--~~l~~li~~cl~~dP~~RPs~~eil~h 353 (361)
+..+.......+...+.+ ..+..++..|++.||++|.|+++.|+.
T Consensus 245 ~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 245 LAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 111111000001111100 137889999999999999999999864
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=2.6e-23 Score=177.44 Aligned_cols=216 Identities=19% Similarity=0.271 Sum_probs=178.4
Q ss_pred HHhcCCCCcCeeeecCceeEEEE-EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRA-QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 163 (361)
+..-.|++.++||+|+||.++.| .+-+++.||||.-...... -++..|....+.| ..++|...+-+..++..-.
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A----PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~Ni 100 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA----PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNI 100 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCCc----chHHHHHHHHHHHcCCCCCCceeeeccccchhh
Confidence 44567999999999999999999 4568999999976544432 3466788888877 4689999998888888889
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC-----CCeEEeeec
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK-----LEAFVADFG 238 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-----~~~kl~Dfg 238 (361)
||+|.. |-||++++.-++. .++..++..++.|++.-++|+|++ .+|.|||||+|+||..- ..+.++|||
T Consensus 101 LVidLL-GPSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG 174 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFG 174 (449)
T ss_pred hhhhhh-CcCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEecc
Confidence 999988 8899999887665 589999999999999999999999 99999999999999543 457899999
Q ss_pred CccccCCCCCC-------cccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc
Q 042457 239 VARLLHSDSSN-------RTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ 311 (361)
Q Consensus 239 ~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 311 (361)
+++.+..+... .....||.+||+-....+..-+.+.|+=|+|-++...+-|..||..............+-+.
T Consensus 175 mAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~ 254 (449)
T KOG1165|consen 175 MAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGET 254 (449)
T ss_pred chhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccc
Confidence 99987654332 23356999999999999999999999999999999999999999877654444444444443
No 414
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.90 E-value=1e-23 Score=193.99 Aligned_cols=206 Identities=25% Similarity=0.443 Sum_probs=156.9
Q ss_pred HhcCCCCcceeeeEEEeeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCe-EEeCC
Q 042457 141 LSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSI-VHRDI 219 (361)
Q Consensus 141 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i-~H~dl 219 (361)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+.... ..++|.-...++++++.||.|||.. .| .|+.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 356899999999999999999999999999999999998743 3689999999999999999999988 54 99999
Q ss_pred CCCCeeeCCCCCeEEeeecCccccCC--CCCCccccccccccccccccccc-------ccCccchhhhHHHHHHHHHhCC
Q 042457 220 SSNNILLNSKLEAFVADFGVARLLHS--DSSNRTVVAGTHGYIAPELAYTM-------VVTEKCDVFGFGVVALEVLMGR 290 (361)
Q Consensus 220 k~~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~slG~~l~el~tg~ 290 (361)
+++|+++|..+.+||+|||+...... .........-..-|.|||.+.+. ..+.++||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999999877642 11111222234569999988653 1467899999999999999999
Q ss_pred CCCCCcccCCc-chhHhhhhcccCCCCCCChhhH-HHHHHHHHHHhhhcCCCCCCCCCccccc
Q 042457 291 HPGDLLSSFNP-KIMLIDLLDQRAPSPIDDQTVI-QDIILVSKIAFACLRSKPKSRPTMRRSF 351 (361)
Q Consensus 291 ~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~eil 351 (361)
.||+....... ......+.+.........-... +....+..++.+||..+|++||+++++-
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~ 218 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIR 218 (484)
T ss_pred CccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence 99986443222 2222333331221111111111 2223588999999999999999999874
No 415
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.90 E-value=3.6e-25 Score=203.77 Aligned_cols=237 Identities=23% Similarity=0.302 Sum_probs=192.7
Q ss_pred eeecCceeEEEEE----eCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 97 IGTGGYGSVYRAQ----LPSGKIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 97 lg~G~~g~V~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+|+|+||.|+.++ .+.|..+|.|.++..............|..++...+ ||.++++.-.++.+...++++++..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 7999999999873 335778899988765432222235567888888886 99999999999999999999999999
Q ss_pred CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcc
Q 042457 172 GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251 (361)
Q Consensus 172 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 251 (361)
|.|...+.+.. .+++.........++-+++++|+. +++|+|+|++||+++.+|.+++.|||+++........
T Consensus 82 g~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-- 153 (612)
T KOG0603|consen 82 GDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-- 153 (612)
T ss_pred chhhhccccCC---chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc--
Confidence 99998887655 577788888899999999999999 9999999999999999999999999999876443332
Q ss_pred cccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHH
Q 042457 252 VVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSK 331 (361)
Q Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (361)
+||..|||||++. ....++|.||||++++||+||..||.. .....+.......|.... ..+.+
T Consensus 154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------~~~~~Il~~~~~~p~~l~------~~a~~ 216 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------DTMKRILKAELEMPRELS------AEARS 216 (612)
T ss_pred --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------HHHHHHhhhccCCchhhh------HHHHH
Confidence 7899999999987 557789999999999999999999875 334445554444443322 23677
Q ss_pred HHhhhcCCCCCCCCCc-----cccccCCCCCC
Q 042457 332 IAFACLRSKPKSRPTM-----RRSFPNPEINP 358 (361)
Q Consensus 332 li~~cl~~dP~~RPs~-----~eil~hp~~~~ 358 (361)
++..++..+|.+|.-. .|+.+|+||+.
T Consensus 217 ~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~ 248 (612)
T KOG0603|consen 217 LFRQLFKRNPENRLGAGPDGVDEIKQHEFFQS 248 (612)
T ss_pred HHHHHHhhCHHHHhccCcchhHHHhccchhee
Confidence 8888999999999866 68999999975
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=1.3e-23 Score=176.93 Aligned_cols=189 Identities=14% Similarity=0.153 Sum_probs=142.4
Q ss_pred ccccCCCCcCHHHHH--HHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchH-HHHHH------HHHHHHHH
Q 042457 71 SVWNYDGRITFEEII--VATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETEL-AFLES------FQTEARLL 141 (361)
Q Consensus 71 ~~~~~~~~~~~~~~~--~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~------~~~e~~~l 141 (361)
.+...+....|.++. ...++|+..+.+|.|+||.||.... ++..+|+|.+....... ..... +.+|+..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l 89 (232)
T PRK10359 11 TVFYKDNDNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQT 89 (232)
T ss_pred EEEecCCcccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHH
Confidence 334444444555553 4688999999999999999999866 57789999997554322 22223 57899999
Q ss_pred hcCCCCcceeeeEEEeeC--------CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCC
Q 042457 142 SQIRHRNIVKLYGFCLHK--------KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPS 213 (361)
Q Consensus 142 ~~l~h~niv~~~~~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ 213 (361)
.+++|++|.....++... +..+++|||++|.+|.++.. ++. ....+++.++..+|.. +
T Consensus 90 ~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---g 155 (232)
T PRK10359 90 DRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---G 155 (232)
T ss_pred HHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---C
Confidence 999999999999886643 35789999999999987632 222 3466999999999999 9
Q ss_pred eEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHH
Q 042457 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVL 287 (361)
Q Consensus 214 i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 287 (361)
++|||++|+||+++.++ ++|+|||.......+.... .+.....+..++|+||||+.+..+.
T Consensus 156 i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d------------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 156 MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKD------------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CccCCCChHHEEEeCCC-EEEEECCCcccccchhhHH------------HHHHHhHhcccccccceeEeehHHH
Confidence 99999999999999988 9999999886542211111 1334445667899999999987654
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.90 E-value=1.9e-23 Score=173.84 Aligned_cols=141 Identities=20% Similarity=0.207 Sum_probs=108.3
Q ss_pred cCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHH------------------------HHHHHHHHHHHhcCCCCcc
Q 042457 94 KYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAF------------------------LESFQTEARLLSQIRHRNI 149 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~------------------------~~~~~~e~~~l~~l~h~ni 149 (361)
...||+|+||.||+|...+|+.||||+++........ ......|+..+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4579999999999998888999999999764321100 1122358999999987776
Q ss_pred eeeeEEEeeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHH-HcCCCCCeEEeCCCCCCeeeCC
Q 042457 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYL-HYDCIPSIVHRDISSNNILLNS 228 (361)
Q Consensus 150 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~i~H~dlk~~Nill~~ 228 (361)
.....+... ..++||||++++++........ .++......++.|++.+|.++ |+. +++||||||+|||+++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~---~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~~ 153 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKDA---PLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYHD 153 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhcC---CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEEC
Confidence 443332222 2389999999887765432222 588899999999999999999 688 9999999999999984
Q ss_pred CCCeEEeeecCcccc
Q 042457 229 KLEAFVADFGVARLL 243 (361)
Q Consensus 229 ~~~~kl~Dfg~~~~~ 243 (361)
+.++|+|||++...
T Consensus 154 -~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 -GKLYIIDVSQSVEH 167 (190)
T ss_pred -CcEEEEEccccccC
Confidence 78999999999754
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.89 E-value=3e-22 Score=167.34 Aligned_cols=141 Identities=21% Similarity=0.281 Sum_probs=110.6
Q ss_pred cCeeeecCceeEEEEEeCCCCEEEEEEeccCcchH------------------------HHHHHHHHHHHHHhcCCCCcc
Q 042457 94 KYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETEL------------------------AFLESFQTEARLLSQIRHRNI 149 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------------~~~~~~~~e~~~l~~l~h~ni 149 (361)
...||+|++|.||+|...+|+.||||++....... .....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999999987789999999987653210 001234578899999999887
Q ss_pred eeeeEEEeeCCeEEEEEEeccCCChhhh-hccCCccCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEEeCCCCCCeeeC
Q 042457 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCV-LRNDDEAIQLDWTKRVNIVKSMAHALSYLHY-DCIPSIVHRDISSNNILLN 227 (361)
Q Consensus 150 v~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~i~H~dlk~~Nill~ 227 (361)
.....+.... .++||||++++++... +... .++......++.+++.++.++|+ . +++|+||||+||+++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~----~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKDV----PLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhhc----cCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 5444433332 4899999998865433 3322 46788899999999999999999 8 999999999999999
Q ss_pred CCCCeEEeeecCccccC
Q 042457 228 SKLEAFVADFGVARLLH 244 (361)
Q Consensus 228 ~~~~~kl~Dfg~~~~~~ 244 (361)
++.++|+|||++....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 7899999999998664
No 419
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.87 E-value=8.6e-22 Score=170.80 Aligned_cols=234 Identities=19% Similarity=0.211 Sum_probs=149.5
Q ss_pred CCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCC----------CcceeeeEEEe-
Q 042457 91 FDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSET-ELAFLESFQTEARLLSQIRH----------RNIVKLYGFCL- 157 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h----------~niv~~~~~~~- 157 (361)
+.....||.|+++.||.++.. +|+.+|+|++..... .....+++.+|.-....+.+ -.++--++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 344667999999999999775 589999998765443 23345777777766655432 12222222222
Q ss_pred --------eCC--------eEEEEEEeccCCChhhhhcc----CCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEe
Q 042457 158 --------HKK--------CMFLIYKYMRRGSLFCVLRN----DDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHR 217 (361)
Q Consensus 158 --------~~~--------~~~lv~e~~~~g~L~~~l~~----~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~ 217 (361)
... +.+++|+-+ .++|.+++.. ......+....++.+..|+++.+++||+. |++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 111 246777777 5688777542 11112345566778889999999999999 99999
Q ss_pred CCCCCCeeeCCCCCeEEeeecCccccCCCCCCcccccccccccccccccc--------cccCccchhhhHHHHHHHHHhC
Q 042457 218 DISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT--------MVVTEKCDVFGFGVVALEVLMG 289 (361)
Q Consensus 218 dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~el~tg 289 (361)
||+|+|++++.+|.++|+||+........ ......+..|.+||.... -.++.+.|.|++|+++|.|++|
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~---~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTR---YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEE---EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCce---eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 99999999999999999999877544221 111234567899997643 2478899999999999999999
Q ss_pred CCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCC
Q 042457 290 RHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSR 344 (361)
Q Consensus 290 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 344 (361)
..||+............. .. . +..+.+..||..+|++||.+|
T Consensus 247 ~lPf~~~~~~~~~~~~f~----------~C--~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEWDFS----------RC--R-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGGGGT----------TS--S----HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccccch----------hc--C-CcCHHHHHHHHHHccCCcccC
Confidence 999986554322221000 01 1 233458899999999999998
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=3.5e-21 Score=158.77 Aligned_cols=185 Identities=14% Similarity=0.079 Sum_probs=138.4
Q ss_pred CCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHH--HHHHHHHHHHHHhcCC-CCcceeeeEEEeeCCeEEEEEEe
Q 042457 92 DIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELA--FLESFQTEARLLSQIR-HRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 92 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
.+...|+.|+||+||.+.. .+.+++.+.+........ ....+.+|+++|++++ |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3466799999999998876 778888888876544211 1225789999999995 5889999886 346999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCC-CCCCeeeCCCCCeEEeeecCccccCCCC
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDI-SSNNILLNSKLEAFVADFGVARLLHSDS 247 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dl-k~~Nill~~~~~~kl~Dfg~~~~~~~~~ 247 (361)
+.|.+|...+.. ....++.|++++|.++|+. ||+|+|| ||+|||++.++.++|+|||++.......
T Consensus 80 I~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 80 LAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999998654321 1135788999999999999 9999999 7999999999999999999998554332
Q ss_pred CC-----c--------cccccccccccccccc--ccccCccchhhhHHHHHHHHHhCCCCCC
Q 042457 248 SN-----R--------TVVAGTHGYIAPELAY--TMVVTEKCDVFGFGVVALEVLMGRHPGD 294 (361)
Q Consensus 248 ~~-----~--------~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~tg~~p~~ 294 (361)
.. . .....++.|++|+... ...--...+.++-|.-+|.++|+..+..
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 11 0 0112466777776422 2222256789999999999999988753
No 421
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.84 E-value=4.5e-22 Score=180.07 Aligned_cols=180 Identities=21% Similarity=0.312 Sum_probs=142.8
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
..++.|++|...+|.++|.........++...+.++.|++.|+.| + +.+|+|+||.||+...+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 478999999999999999876666678899999999999999999 5 8999999999999999999999999998
Q ss_pred cccCCCC------CCcccccccccccccccccccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccC
Q 042457 241 RLLHSDS------SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRA 313 (361)
Q Consensus 241 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 313 (361)
....... ...+...||..||+||.+.+..|+.++||||||++|+|+++ -...++ ......++.++.+
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e------r~~t~~d~r~g~i 477 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE------RIATLTDIRDGII 477 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH------HHHhhhhhhcCCC
Confidence 8765544 12344569999999999999999999999999999999997 333332 1222344555555
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 314 PSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
++......+ .=..|+.+++...|.+||++.+.--|+|.+
T Consensus 478 p~~~~~d~p-----~e~~ll~~lls~~p~~RP~~~~~~~~~~~~ 516 (516)
T KOG1033|consen 478 PPEFLQDYP-----EEYTLLQQLLSPSPEERPSAIEVALHEFLQ 516 (516)
T ss_pred ChHHhhcCc-----HHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence 522222211 234677799999999999888888887754
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.83 E-value=8.7e-20 Score=153.29 Aligned_cols=135 Identities=17% Similarity=0.186 Sum_probs=104.4
Q ss_pred CcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-----CCCcceeeeEEEeeCC---e-EE
Q 042457 93 IKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQI-----RHRNIVKLYGFCLHKK---C-MF 163 (361)
Q Consensus 93 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~---~-~~ 163 (361)
-...||+|+||.||. ...++. .+||+........ .+.+.+|+.+++.+ +||||++++|++.++. . ..
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~~~--~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGDGG--DKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred CcceecCCCceEEEE-CCCCcC-eEEEEEeccccch--HHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 356799999999996 323444 4799886543322 36789999999999 5799999999999874 3 33
Q ss_pred EEEEe--ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHH-HHHHcCCCCCeEEeCCCCCCeeeCC----CCCeEEee
Q 042457 164 LIYKY--MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHAL-SYLHYDCIPSIVHRDISSNNILLNS----KLEAFVAD 236 (361)
Q Consensus 164 lv~e~--~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~~Lh~~~~~~i~H~dlk~~Nill~~----~~~~kl~D 236 (361)
+|+|| +.+++|.+++.+. .+++. ..++.+++.++ +|||++ +|+||||||+|||++. +..++|+|
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred EEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 78999 6689999999653 24444 35678888777 999999 9999999999999963 34799999
Q ss_pred ecCc
Q 042457 237 FGVA 240 (361)
Q Consensus 237 fg~~ 240 (361)
++-+
T Consensus 153 g~G~ 156 (210)
T PRK10345 153 NIGE 156 (210)
T ss_pred CCCC
Confidence 4433
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=1.3e-20 Score=185.31 Aligned_cols=199 Identities=25% Similarity=0.329 Sum_probs=159.2
Q ss_pred HHHHHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC---CCcceeeeEEEeeC
Q 042457 83 EIIVATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIR---HRNIVKLYGFCLHK 159 (361)
Q Consensus 83 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 159 (361)
+.++..+.|.+.+.+|+|+||+||+|...+|+.||+|+-+...... |---.+++.+|+ -+-|..+...+.-.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE-----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE-----FYICLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee-----eeehHHHHHhhchhhhcchHHHHHHHccC
Confidence 4456667889999999999999999988889999999977665432 111223344444 23355555555666
Q ss_pred CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeC-------CCCCe
Q 042457 160 KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLN-------SKLEA 232 (361)
Q Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~-------~~~~~ 232 (361)
+.-++|+||.+.|+|.+++.... .++|.-...+..|+++.+.+||.. +||||||||+|.||. ++.-+
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~~~---~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l 840 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINTNK---VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGL 840 (974)
T ss_pred CcceeeeeccccccHHHhhccCC---CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccce
Confidence 77899999999999999998544 689999999999999999999999 999999999999993 23458
Q ss_pred EEeeecCccccCC--CCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCC
Q 042457 233 FVADFGVARLLHS--DSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHP 292 (361)
Q Consensus 233 kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 292 (361)
+|+|||.+-.+.- +.......++|-.+-.+|...|..++..+|.|.++.+++-|+.|+.-
T Consensus 841 ~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 841 YLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred EEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 9999999866532 33344556788899999999999999999999999999999999754
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.82 E-value=1.6e-19 Score=155.40 Aligned_cols=143 Identities=22% Similarity=0.223 Sum_probs=111.3
Q ss_pred CCCCcCeeeecCceeEEEEE--eCCCCEEEEEEeccCcch----------------------HHHHHHHHHHHHHHhcCC
Q 042457 90 DFDIKYCIGTGGYGSVYRAQ--LPSGKIVALKKLHHSETE----------------------LAFLESFQTEARLLSQIR 145 (361)
Q Consensus 90 ~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~----------------------~~~~~~~~~e~~~l~~l~ 145 (361)
-|.+.+.||+|++|.||+|. ..+|+.||+|++...... ......+..|+..+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47888999999999999998 568999999998754311 001133568999999997
Q ss_pred CC--cceeeeEEEeeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCC-eEEeCCCCC
Q 042457 146 HR--NIVKLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPS-IVHRDISSN 222 (361)
Q Consensus 146 h~--niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~-i~H~dlk~~ 222 (361)
+. .+.+++++ ...++||||+++.+|........ .+.......++.|++.++.+||+. + ++|+||||+
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~ 178 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEY 178 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChh
Confidence 53 33444443 23589999999988876543222 355666789999999999999999 9 999999999
Q ss_pred CeeeCCCCCeEEeeecCcccc
Q 042457 223 NILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 223 Nill~~~~~~kl~Dfg~~~~~ 243 (361)
||+++ ++.++|+|||.+...
T Consensus 179 NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hEEEE-CCCEEEEEChhhhcc
Confidence 99999 789999999998754
No 425
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=1e-19 Score=159.13 Aligned_cols=189 Identities=24% Similarity=0.365 Sum_probs=134.0
Q ss_pred CCCcceeeeEEEeeC---------------------------CeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHH
Q 042457 145 RHRNIVKLYGFCLHK---------------------------KCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVK 197 (361)
Q Consensus 145 ~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~ 197 (361)
+|||||++.++|.+. ...|+||...+. +|..++-.+. .+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHHH
Confidence 599999999876532 357889987754 8888887653 56667788999
Q ss_pred HHHHHHHHHHcCCCCCeEEeCCCCCCeee--CCCC--CeEEeeecCccccCCC------CCCcccccccccccccccccc
Q 042457 198 SMAHALSYLHYDCIPSIVHRDISSNNILL--NSKL--EAFVADFGVARLLHSD------SSNRTVVAGTHGYIAPELAYT 267 (361)
Q Consensus 198 ~i~~~l~~Lh~~~~~~i~H~dlk~~Nill--~~~~--~~kl~Dfg~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~ 267 (361)
|+++|+.|||.+ ++.|||+|++|||+ |+|. ...|+|||.+-.-... ........|...-||||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 99999999999999 4444 4678999987533221 111222346778999998764
Q ss_pred cc------cCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCC-CCCCChhhHHHHHHHHHHHhhhcCCC
Q 042457 268 MV------VTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAP-SPIDDQTVIQDIILVSKIAFACLRSK 340 (361)
Q Consensus 268 ~~------~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~d 340 (361)
.+ .-.|+|.|+.|.+.||+++...||-......-+ ....-+.+++ .+...+. .+.+++...|+.|
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~--~r~Yqe~qLPalp~~vpp------~~rqlV~~lL~r~ 497 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLD--TRTYQESQLPALPSRVPP------VARQLVFDLLKRD 497 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheec--hhhhhhhhCCCCcccCCh------HHHHHHHHHhcCC
Confidence 32 235899999999999999999998753321111 1111122222 2222222 3678888999999
Q ss_pred CCCCCCccc
Q 042457 341 PKSRPTMRR 349 (361)
Q Consensus 341 P~~RPs~~e 349 (361)
|++|+|.+=
T Consensus 498 pskRvsp~i 506 (598)
T KOG4158|consen 498 PSKRVSPNI 506 (598)
T ss_pred ccccCCccH
Confidence 999999753
No 426
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.81 E-value=2.2e-19 Score=151.22 Aligned_cols=147 Identities=19% Similarity=0.210 Sum_probs=113.5
Q ss_pred HHHHHHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchH--------------------HHHHHHHHHHHHH
Q 042457 82 EEIIVATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETEL--------------------AFLESFQTEARLL 141 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------~~~~~~~~e~~~l 141 (361)
+++......|.+.+.||+|+||.||++...+|+.||||++....... .....+..|...+
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 34444455588889999999999999988889999999876433110 0112356788888
Q ss_pred hcCCCCc--ceeeeEEEeeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCC
Q 042457 142 SQIRHRN--IVKLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDI 219 (361)
Q Consensus 142 ~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dl 219 (361)
..+.|++ +.+.++. ...+++|||+++++|...... .....++.+++.++.++|+. +++|+||
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl 151 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDL 151 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence 8887764 4444432 345899999999998765431 23467889999999999998 9999999
Q ss_pred CCCCeeeCCCCCeEEeeecCccccC
Q 042457 220 SSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 220 k~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
+|+||++++++.++|+|||++....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999999996554
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=4.6e-19 Score=150.87 Aligned_cols=136 Identities=18% Similarity=0.331 Sum_probs=114.1
Q ss_pred CeeeecCceeEEEEEeCCCCEEEEEEeccCcch------HHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEe
Q 042457 95 YCIGTGGYGSVYRAQLPSGKIVALKKLHHSETE------LAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKY 168 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 168 (361)
+.||+|++|.||+|.. +|..+++|+....... ......+..|+.++..++|+++.....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4689999999999988 7778999986543221 11124577899999999999988777777777888999999
Q ss_pred ccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 169 MRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 169 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++|++|.+++.... + .+..++.+++.+|.++|+. +++|+|++|.|||++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999886432 2 7889999999999999999 999999999999999 78899999998864
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.79 E-value=9.5e-19 Score=147.55 Aligned_cols=131 Identities=21% Similarity=0.372 Sum_probs=107.5
Q ss_pred eeecCceeEEEEEeCCCCEEEEEEeccCcc------hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEecc
Q 042457 97 IGTGGYGSVYRAQLPSGKIVALKKLHHSET------ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMR 170 (361)
Q Consensus 97 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 170 (361)
||+|+||.||+|.+ +|..|++|....... .....+.+..|++++..++|+++.....++...+..+++|||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 89999999999996 678899998654321 11123567789999999998876655556666677899999999
Q ss_pred CCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 171 RGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 171 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
|++|.+.+..... .++.+++.+|.+||+. +++|+|++|.||+++ ++.++++|||++..
T Consensus 81 g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEEGND----------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhhcHH----------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999988754321 7899999999999999 999999999999999 78999999998865
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.78 E-value=1.1e-18 Score=168.29 Aligned_cols=141 Identities=20% Similarity=0.286 Sum_probs=113.3
Q ss_pred HhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEe-ccCcc-----hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKL-HHSET-----ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK 160 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~-~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 160 (361)
....|...+.||+|+||.||+|.+.+.. +++|+. ..... .....+.+.+|+++++.++|++++....++....
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 3445567889999999999999885444 444432 21111 1122356889999999999999998888888777
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
..++||||+++++|.+++. ....++.+++++|.+||+. +++||||||+|||+ +++.++|+|||++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 7899999999999998874 3467999999999999999 99999999999999 6779999999998
Q ss_pred ccc
Q 042457 241 RLL 243 (361)
Q Consensus 241 ~~~ 243 (361)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 753
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.77 E-value=3.3e-19 Score=172.72 Aligned_cols=220 Identities=24% Similarity=0.305 Sum_probs=153.9
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
..+|+.++.+..|+||.||..++. ..+.+|+|+-+ ... +.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~l-------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QNL-------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cch-------hhhc--cccccCCccee----------------
Confidence 357888999999999999999775 35678874322 111 0000 22222333333
Q ss_pred EeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCC
Q 042457 167 KYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246 (361)
Q Consensus 167 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 246 (361)
|+-...+...+. +.. +++.+++|||+. +|+|||+||+|.+++.-|.+|++|||+.+.....
T Consensus 136 -----gDc~tllk~~g~---lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 136 -----GDCATLLKNIGP---LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred -----chhhhhcccCCC---Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 455555554332 221 127899999999 9999999999999999999999999998754221
Q ss_pred C---------------CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcc
Q 042457 247 S---------------SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQ 311 (361)
Q Consensus 247 ~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 311 (361)
. ......+||+.|.|||++....|....|.|++|+|+||.+-|+.||..... +.....++..
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp---eelfg~visd 273 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP---EELFGQVISD 273 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH---HHHHhhhhhh
Confidence 1 112335799999999999999999999999999999999999999875432 2333333333
Q ss_pred cCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCC---CccccccCCCCCC
Q 042457 312 RAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRP---TMRRSFPNPEINP 358 (361)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~eil~hp~~~~ 358 (361)
....+..++.... +..+++.+.|+.+|..|- .+-++-+|+||+.
T Consensus 274 ~i~wpE~dea~p~---Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~ 320 (1205)
T KOG0606|consen 274 DIEWPEEDEALPP---EAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQL 320 (1205)
T ss_pred hccccccCcCCCH---HHHHHHHHHHHhChHhhcccchhhhhhhccceee
Confidence 3333333332222 377888899999999996 5567789999974
No 431
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=3.4e-19 Score=171.58 Aligned_cols=262 Identities=21% Similarity=0.264 Sum_probs=194.2
Q ss_pred hcCCCCcCeeeecCceeEEEEEeC--CCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeCCeEEE
Q 042457 88 TEDFDIKYCIGTGGYGSVYRAQLP--SGKIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGFCLHKKCMFL 164 (361)
Q Consensus 88 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l 164 (361)
...|.+.+.||+|+|+.|-..... ....+|+|.+..........+....|..+-..+. |+|++++++.....+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 445777778999999999888553 3445677766555433333455556777777776 9999999999999999999
Q ss_pred EEEeccCCChhhhh-ccCCccCCCCHHHHHHHHHHHHHHHHHHH-cCCCCCeEEeCCCCCCeeeCCCC-CeEEeeecCcc
Q 042457 165 IYKYMRRGSLFCVL-RNDDEAIQLDWTKRVNIVKSMAHALSYLH-YDCIPSIVHRDISSNNILLNSKL-EAFVADFGVAR 241 (361)
Q Consensus 165 v~e~~~~g~L~~~l-~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh-~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfg~~~ 241 (361)
.++|..++++.+.+ ..... ..+....-..+.|+..++.|+| .. ++.|+|+||+|.+++..+ ..+++|||++.
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~--~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDST--GTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred ccCcccccccccccccCCcc--CCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 99999999999888 33321 2444556789999999999999 77 999999999999999999 99999999998
Q ss_pred ccCC-CCC--Ccccccc-cccccccccccc-cccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCC
Q 042457 242 LLHS-DSS--NRTVVAG-THGYIAPELAYT-MVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSP 316 (361)
Q Consensus 242 ~~~~-~~~--~~~~~~g-t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 316 (361)
.+.. ... ......| ++.|+|||...+ ....+..|+||.|+++.-+++|..|++.....+.... ..........
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~--~~~~~~~~~~ 251 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS--SWKSNKGRFT 251 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce--eecccccccc
Confidence 8765 222 2233467 999999999887 4556789999999999999999999876554332211 1111110000
Q ss_pred CCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 317 IDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.... ........+++.+++..+|+.|.+.+++-.+||+..
T Consensus 252 ~~~~--~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 252 QLPW--NSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cCcc--ccCChhhhhcccccccCCchhccccccccccccccc
Confidence 0000 001113567777899999999999999999999875
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.74 E-value=1.6e-17 Score=138.62 Aligned_cols=138 Identities=21% Similarity=0.260 Sum_probs=98.9
Q ss_pred cCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHH----------------------HHHHHHHhcCCCC--cc
Q 042457 94 KYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESF----------------------QTEARLLSQIRHR--NI 149 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~----------------------~~e~~~l~~l~h~--ni 149 (361)
.+.||+|+||.||+|...+|+.||||++............+ ..|...+..+.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999988889999999987543321111111 2455555555433 24
Q ss_pred eeeeEEEeeCCeEEEEEEeccCCChhh-hhccCCccCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEEeCCCCCCeeeC
Q 042457 150 VKLYGFCLHKKCMFLIYKYMRRGSLFC-VLRNDDEAIQLDWTKRVNIVKSMAHALSYLHY-DCIPSIVHRDISSNNILLN 227 (361)
Q Consensus 150 v~~~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~i~H~dlk~~Nill~ 227 (361)
.+.++. ...+++|||++++.+.. .+.... .. .+...++.+++.++.++|. . +++|+||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 444433 23589999999965432 122111 11 5678899999999999999 7 999999999999999
Q ss_pred CCCCeEEeeecCccccC
Q 042457 228 SKLEAFVADFGVARLLH 244 (361)
Q Consensus 228 ~~~~~kl~Dfg~~~~~~ 244 (361)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8899999999997554
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.72 E-value=1.2e-16 Score=128.21 Aligned_cols=135 Identities=18% Similarity=0.154 Sum_probs=114.1
Q ss_pred CcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCC--CcceeeeEEEeeCCeEEEEEEecc
Q 042457 93 IKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRH--RNIVKLYGFCLHKKCMFLIYKYMR 170 (361)
Q Consensus 93 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~ 170 (361)
+.+.||+|.++.||++...+ ..+++|....... ...+..|+..++.++| .++.+++++....+..++++||++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~ 76 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIE 76 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecC
Confidence 35679999999999999844 7899999865543 3567889999999976 589999998888888999999999
Q ss_pred CCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 171 RGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 171 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
++.+..+ +......++.+++++++++|.....+++|+|++|+||++++++.++++|||.+..
T Consensus 77 g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 77 GETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 8877654 4566778899999999999987545799999999999999989999999998853
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.69 E-value=3.9e-16 Score=134.68 Aligned_cols=137 Identities=18% Similarity=0.244 Sum_probs=106.1
Q ss_pred Ceee-ecCceeEEEEEeCCCCEEEEEEeccCcc-----------hHHHHHHHHHHHHHHhcCCCCcc--eeeeEEEeeCC
Q 042457 95 YCIG-TGGYGSVYRAQLPSGKIVALKKLHHSET-----------ELAFLESFQTEARLLSQIRHRNI--VKLYGFCLHKK 160 (361)
Q Consensus 95 ~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~~ 160 (361)
..|| .|+.|+||.+.. ++..++||.+..... +......+.+|++++..++|+++ ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4588 899999999988 477899998854221 11223567889999999998775 66777654432
Q ss_pred ----eEEEEEEeccC-CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEe
Q 042457 161 ----CMFLIYKYMRR-GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVA 235 (361)
Q Consensus 161 ----~~~lv~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~ 235 (361)
..++|+|++++ .+|.+++... .++.. .+.+++.++.+||+. ||+|+||||+|||++.++.++|+
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEE
Confidence 23599999997 6898887643 24433 367899999999999 99999999999999998899999
Q ss_pred eecCcccc
Q 042457 236 DFGVARLL 243 (361)
Q Consensus 236 Dfg~~~~~ 243 (361)
|||.+...
T Consensus 185 Dfg~~~~~ 192 (239)
T PRK01723 185 DFDRGELR 192 (239)
T ss_pred ECCCcccC
Confidence 99988753
No 435
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.63 E-value=3.8e-16 Score=133.83 Aligned_cols=207 Identities=24% Similarity=0.333 Sum_probs=145.5
Q ss_pred HHHHhcCCCCcceeeeEEEeeCC-----eEEEEEEeccCCChhhhhccCC-ccCCCCHHHHHHHHHHHHHHHHHHHcCCC
Q 042457 138 ARLLSQIRHRNIVKLYGFCLHKK-----CMFLIYKYMRRGSLFCVLRNDD-EAIQLDWTKRVNIVKSMAHALSYLHYDCI 211 (361)
Q Consensus 138 ~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~ 211 (361)
..-+-.+.|.|||++..|+.+.. ...++.|||..|++..+|++.. ....+......+|+.||..||.|||+ +.
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CD 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence 34455567999999999887643 5788999999999999998743 23357777888999999999999997 57
Q ss_pred CCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC----CCCCcccccccccccccccccccccCccchhhhHHHHHHHHH
Q 042457 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHS----DSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVL 287 (361)
Q Consensus 212 ~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 287 (361)
|.++|+++..+.|++..++-+|++--........ .........+-++|.|||+=.....+.++|||+||...+||-
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 7899999999999999999888753221111000 001112234678899999866666778999999999999998
Q ss_pred hCCCC-CCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 288 MGRHP-GDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 288 tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
-|..- ....+....+....+........ .=..++..|++.+|..||+|++++-||-+=
T Consensus 277 ilEiq~tnseS~~~~ee~ia~~i~~len~------------lqr~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIANVIIGLENG------------LQRGSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred HheeccCCCcceeehhhhhhhheeeccCc------------cccCcCcccccCCCCCCcchhhhhcCceee
Confidence 77643 33222222222222221111100 123456699999999999999999999653
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.62 E-value=4.2e-16 Score=144.05 Aligned_cols=255 Identities=23% Similarity=0.219 Sum_probs=183.6
Q ss_pred cCCCCcCeeee--cCceeEEEEEe---CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeE
Q 042457 89 EDFDIKYCIGT--GGYGSVYRAQL---PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCM 162 (361)
Q Consensus 89 ~~~~~~~~lg~--G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 162 (361)
..|.....+|. |.+|.+|.+.. .++..+|+|+-+...........=.+|+....++ .|+|.++.+..+...+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 44666788999 99999999965 4688899998544332211112223566666666 499999988888999999
Q ss_pred EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHH----HHHHHHcCCCCCeEEeCCCCCCeeeCCC-CCeEEeee
Q 042457 163 FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAH----ALSYLHYDCIPSIVHRDISSNNILLNSK-LEAFVADF 237 (361)
Q Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~~Lh~~~~~~i~H~dlk~~Nill~~~-~~~kl~Df 237 (361)
++-+|.+. .+|..+-..... .+.....+....+..+ |+.++|.. +++|-|+||.||+...+ ...+++||
T Consensus 194 fiqtE~~~-~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeecccc-chhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 99999985 677776655332 3555666777777777 99999999 99999999999999999 88999999
Q ss_pred cCccccCCCCCCccc-----ccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCc--ccCCcchhHhhhhc
Q 042457 238 GVARLLHSDSSNRTV-----VAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLL--SSFNPKIMLIDLLD 310 (361)
Q Consensus 238 g~~~~~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~--~~~~~~~~~~~~~~ 310 (361)
|+...+......... ..+...|++||.. .+-++.++|+|++|.++.+..+|..+.... ..+.+...
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~------ 340 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ------ 340 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc------
Confidence 999888665533222 2577889999975 455788999999999999999887664432 11111100
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCCCC
Q 042457 311 QRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINPSL 360 (361)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~~~ 360 (361)
...+.... . .....+...+.++++.+|-.|++.+.+.+|+++...+
T Consensus 341 ~~ip~e~~-~---~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~ 386 (524)
T KOG0601|consen 341 GYIPLEFC-E---GGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL 386 (524)
T ss_pred ccCchhhh-c---CcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh
Confidence 00110000 0 0111244578899999999999999999999997643
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.58 E-value=1.3e-14 Score=135.80 Aligned_cols=143 Identities=21% Similarity=0.248 Sum_probs=101.0
Q ss_pred cCeeeecCceeEEEEEeCCCCEEEEEEeccCcchH----------------------------HHH----------HHHH
Q 042457 94 KYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETEL----------------------------AFL----------ESFQ 135 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----------------------------~~~----------~~~~ 135 (361)
.+.||.|++|.||+|++.+|+.||||+.+...... ... -+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 35799999999999999999999999986542110 000 0244
Q ss_pred HHHHHHhcC----CCCcceeeeEEEee-CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHH-HHHHHHcC
Q 042457 136 TEARLLSQI----RHRNIVKLYGFCLH-KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAH-ALSYLHYD 209 (361)
Q Consensus 136 ~e~~~l~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~-~l~~Lh~~ 209 (361)
.|+..+.++ +|.+-+.+-..+.+ ....++||||++|++|.++...... .. ....++..++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhC
Confidence 555555554 23333333333332 3457999999999999887653211 12 23456666666 46788988
Q ss_pred CCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 210 ~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
|++|+|++|.||+++.+++++++|||++..+.
T Consensus 277 ---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 ---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999997764
No 438
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.51 E-value=1.9e-13 Score=128.03 Aligned_cols=169 Identities=19% Similarity=0.251 Sum_probs=128.7
Q ss_pred EeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCChhhhhccCCccCCCC
Q 042457 109 QLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLD 188 (361)
Q Consensus 109 ~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~ 188 (361)
+..++.+|.|...+.... ...+...+.++.|+.++||||++++......+..|+|+|-+. .|..++.+ ++
T Consensus 33 ~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~ 102 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LG 102 (690)
T ss_pred eeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hH
Confidence 445788888888877665 334566778899999999999999999999999999999873 56666653 33
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCccccccccccccccccccc
Q 042457 189 WTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTM 268 (361)
Q Consensus 189 ~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 268 (361)
......-+.||+.||.|||..+ +++|+++.-..|+|+..|..||++|.++..............--..|..|+.+...
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s 180 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS 180 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCcc
Confidence 4566778899999999999776 89999999999999999999999999886543322211212222345666644322
Q ss_pred ccCccchhhhHHHHHHHHHhCCC
Q 042457 269 VVTEKCDVFGFGVVALEVLMGRH 291 (361)
Q Consensus 269 ~~~~~~Dv~slG~~l~el~tg~~ 291 (361)
. ...|.|-||++++|++.|..
T Consensus 181 ~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 181 E--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred c--cchhhhhHHHHHHHHhCccc
Confidence 2 34699999999999999943
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.46 E-value=3.5e-13 Score=110.46 Aligned_cols=129 Identities=20% Similarity=0.196 Sum_probs=94.8
Q ss_pred CeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcce-eeeEEEeeCCeEEEEEEeccCCC
Q 042457 95 YCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIV-KLYGFCLHKKCMFLIYKYMRRGS 173 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~g~ 173 (361)
+.++.|.++.||+++. .+..+++|........ ...+..|+..++.+.+.+++ +++.+. ....++||||++|.+
T Consensus 4 ~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~ 77 (170)
T cd05151 4 SPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTEL---LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSE 77 (170)
T ss_pred eecCCcccCceEEEEE-CCeEEEEEeCCCCccc---ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCc
Confidence 4578899999999987 4778999987654321 13456888888888655544 444443 233579999999988
Q ss_pred hhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCC--CCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 174 LFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDC--IPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 174 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~--~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
+...- . ....++.+++++|+.||... ..+++|+|++|.||+++ ++.++++||+.+.
T Consensus 78 l~~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 78 LLTED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 76430 0 11345789999999999983 12369999999999999 6689999999875
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.46 E-value=1.2e-13 Score=130.81 Aligned_cols=146 Identities=21% Similarity=0.249 Sum_probs=94.0
Q ss_pred cCCCCcCeeeecCceeEEEEEeCC-CCEEEEEEeccCcch----------------------------H----HHHHH--
Q 042457 89 EDFDIKYCIGTGGYGSVYRAQLPS-GKIVALKKLHHSETE----------------------------L----AFLES-- 133 (361)
Q Consensus 89 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~----------------------------~----~~~~~-- 133 (361)
.+|+. +.||.|++|.||+|++.+ |+.||||+.+..-.. . +..+.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 689999999999999887 999999999754210 0 11112
Q ss_pred ----HHHHHHHHhcCC----CCcceeeeEEEee-CCeEEEEEEeccCCChhhh--hccCC-ccCCCCHHHHHHHHHHHHH
Q 042457 134 ----FQTEARLLSQIR----HRNIVKLYGFCLH-KKCMFLIYKYMRRGSLFCV--LRNDD-EAIQLDWTKRVNIVKSMAH 201 (361)
Q Consensus 134 ----~~~e~~~l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~g~L~~~--l~~~~-~~~~l~~~~~~~i~~~i~~ 201 (361)
+..|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.+.+. +...+ ....+.......++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 334444444432 3333443344433 3456899999999999764 22221 00112222233333333
Q ss_pred HHHHHHcCCCCCeEEeCCCCCCeeeCCCC----CeEEeeecCccccCC
Q 042457 202 ALSYLHYDCIPSIVHRDISSNNILLNSKL----EAFVADFGVARLLHS 245 (361)
Q Consensus 202 ~l~~Lh~~~~~~i~H~dlk~~Nill~~~~----~~kl~Dfg~~~~~~~ 245 (361)
... |++|+|++|.||+++.++ +++++|||++..+..
T Consensus 277 -----f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 -----FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -----HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 345 999999999999999888 999999999877643
No 441
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=1e-13 Score=128.49 Aligned_cols=250 Identities=19% Similarity=0.185 Sum_probs=179.4
Q ss_pred HhcCCCCcCeeeecCceeEEEEEe--CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEeeCCeEE
Q 042457 87 ATEDFDIKYCIGTGGYGSVYRAQL--PSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 87 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 163 (361)
...+|.++..||.|.|+.|+.... .++..+++|.+...-........-..|+.+...+ .|.++++++..+......+
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 345788899999999999999854 4688899998876554332223334566666655 5888888887777777788
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCC-CCeEEeeecCccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSK-LEAFVADFGVARL 242 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfg~~~~ 242 (361)
+--|||+++++..... ....++...++++..|++.++.++|+. .++|+|++|+||++..+ +..+++|||.+..
T Consensus 343 ip~e~~~~~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSV---TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred CchhhhcCcchhhhhH---HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccccc
Confidence 9999999998875552 222577888999999999999999998 99999999999999876 7788999999864
Q ss_pred cCCCCCCccccccccccc--ccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCCh
Q 042457 243 LHSDSSNRTVVAGTHGYI--APELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQ 320 (361)
Q Consensus 243 ~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (361)
+.. ......+.-+++ +++......+..+.|++|||.-+.|.++|..--..... ...+..+..+......
T Consensus 417 ~~~---~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~------~~~i~~~~~p~~~~~~ 487 (524)
T KOG0601|consen 417 LAF---SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ------SLTIRSGDTPNLPGLK 487 (524)
T ss_pred cce---ecccccccccccccchhhccccccccccccccccccccccccCcccCccccc------ceeeecccccCCCchH
Confidence 221 111222333444 45555567788899999999999999998765322111 1222333333222211
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCC
Q 042457 321 TVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEIN 357 (361)
Q Consensus 321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~ 357 (361)
..+..+.+.+..+++..||.+.++..|+-|.
T Consensus 488 ------~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 488 ------LQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ------HhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 2356667788999999999999998887653
No 442
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.41 E-value=4.2e-12 Score=104.91 Aligned_cols=138 Identities=18% Similarity=0.192 Sum_probs=98.6
Q ss_pred CeeeecCceeEEEEEeCC-------CCEEEEEEeccCcc-----------h---------HHHHHHHH----HHHHHHhc
Q 042457 95 YCIGTGGYGSVYRAQLPS-------GKIVALKKLHHSET-----------E---------LAFLESFQ----TEARLLSQ 143 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~-----------~---------~~~~~~~~----~e~~~l~~ 143 (361)
..||.|--+.||.|...+ +..+|||+.+.+.. + ......+. +|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999996543 47899998754211 0 01122233 78999998
Q ss_pred CCC--CcceeeeEEEeeCCeEEEEEEeccCCChhh-hhccCCccCCCCHHHHHHHHHHHHHHHHHH-HcCCCCCeEEeCC
Q 042457 144 IRH--RNIVKLYGFCLHKKCMFLIYKYMRRGSLFC-VLRNDDEAIQLDWTKRVNIVKSMAHALSYL-HYDCIPSIVHRDI 219 (361)
Q Consensus 144 l~h--~niv~~~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~i~H~dl 219 (361)
+.. -++.+.+++ ..-++||||+.++.+.. .+++. .++..+...+..+++.+|..| |.. +++||||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 853 456666654 44689999997654422 23221 244556678889999999999 788 9999999
Q ss_pred CCCCeeeCCCCCeEEeeecCccccC
Q 042457 220 SSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 220 k~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
++.||++++ +.+.|+|||.+....
T Consensus 152 s~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEEC-CcEEEEECCCceeCC
Confidence 999999974 679999999886553
No 443
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.34 E-value=4.4e-13 Score=130.87 Aligned_cols=262 Identities=20% Similarity=0.237 Sum_probs=179.3
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeC-CCCEEEEEEeccCcchH-HHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKIVALKKLHHSETEL-AFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMF 163 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 163 (361)
...+.+.+.+-+..|.++.++.+.-. .|...+.|.......-. ...+....+-.+.-..++|-+++..-.+......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 34456667777888999999887432 34444444433222100 00111222222222233455554444444566789
Q ss_pred EEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 164 LIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
|+++|..+++|...|++.. ..+..-.......+.+.+++||.. .+.|+|++|.|.+...++..+++|||.....
T Consensus 881 L~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccc
Confidence 9999999999999998766 345455566777889999999998 7999999999999999999999999833221
Q ss_pred CC------C---------------C----------CCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCC
Q 042457 244 HS------D---------------S----------SNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHP 292 (361)
Q Consensus 244 ~~------~---------------~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 292 (361)
.. . . .......+|+.|.+||...+......+|.|+.|+.++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 00 0 0 001223589999999999999999999999999999999999999
Q ss_pred CCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCcc---ccccCCCCCCC
Q 042457 293 GDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMR---RSFPNPEINPS 359 (361)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~---eil~hp~~~~~ 359 (361)
|..... .....++.....+.+....... ....+++...+..+|.+|-.+. ++-.||||+..
T Consensus 1035 ~na~tp---q~~f~ni~~~~~~~p~g~~~~s---~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1035 FNAETP---QQIFENILNRDIPWPEGPEEGS---YEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred CCCcch---hhhhhccccCCCCCCCCccccC---hhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence 875543 3333455555555444322221 2366777788999999999999 99999999874
No 444
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.33 E-value=2.1e-11 Score=104.40 Aligned_cols=142 Identities=19% Similarity=0.232 Sum_probs=109.8
Q ss_pred CeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCC--CcceeeeEEEeeCC---eEEEEEEec
Q 042457 95 YCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRH--RNIVKLYGFCLHKK---CMFLIYKYM 169 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~---~~~lv~e~~ 169 (361)
+.|+.|.++.+|++...+|..+++|........ .....+..|.++++.+++ .++.+++.+..... ..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 458999999999998877788999997654331 123567889999999875 34577777776643 578999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCC---------------------------------------
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDC--------------------------------------- 210 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~--------------------------------------- 210 (361)
+|.++.+.+.. ..++..+...++.+++++|..||+..
T Consensus 83 ~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 83 DGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 99988876532 14677788888889999999888531
Q ss_pred --------------CCCeEEeCCCCCCeeeCC--CCCeEEeeecCcc
Q 042457 211 --------------IPSIVHRDISSNNILLNS--KLEAFVADFGVAR 241 (361)
Q Consensus 211 --------------~~~i~H~dlk~~Nill~~--~~~~kl~Dfg~~~ 241 (361)
...++|+|+.+.||+++. ++.+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 135799999999999998 5668899999875
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.31 E-value=3.8e-11 Score=96.02 Aligned_cols=132 Identities=21% Similarity=0.337 Sum_probs=100.9
Q ss_pred eeeecCceeEEEEEeCCCCEEEEEEec-cCcc-----hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEec
Q 042457 96 CIGTGGYGSVYRAQLPSGKIVALKKLH-HSET-----ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~~~~vavK~~~-~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
.+++|+-+.+|.+.+ -|..+++|.-. +.-. ..-..+....|+.++.+++--.|.--.-+..+.+...++|||.
T Consensus 3 ~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 478999999999988 44446777532 2211 1112345678999999886555555555666777788999999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
+|..|.+.+... ...++..+-.-+.-||.. +|+|+||.++||++.++. +.++|||++..
T Consensus 82 ~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999888754 246788888899999999 999999999999998875 99999999864
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.26 E-value=1.5e-10 Score=92.25 Aligned_cols=146 Identities=19% Similarity=0.227 Sum_probs=104.2
Q ss_pred CcCeeeecCceeEEEEEeCCCCEEEEEEecc-Ccc-----hHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEE
Q 042457 93 IKYCIGTGGYGSVYRAQLPSGKIVALKKLHH-SET-----ELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 93 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~-~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 166 (361)
....+-||+-+.|+++.+ .|+..+||.-.. .-. ..-......+|++.+.+++--.|.--.-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456688999999999999 788877775322 211 1122356778999998886444444444555666678999
Q ss_pred EeccC-CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC---CeEEeeecCccc
Q 042457 167 KYMRR-GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL---EAFVADFGVARL 242 (361)
Q Consensus 167 e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~---~~kl~Dfg~~~~ 242 (361)
||+++ .++.+++...-... ........++..|-+.+.-||.+ +++||||..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99977 46777776543221 22233378899999999999999 999999999999996554 357999999864
Q ss_pred c
Q 042457 243 L 243 (361)
Q Consensus 243 ~ 243 (361)
.
T Consensus 166 s 166 (229)
T KOG3087|consen 166 S 166 (229)
T ss_pred c
Confidence 3
No 447
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=5.8e-12 Score=118.61 Aligned_cols=158 Identities=17% Similarity=0.188 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCC---------ccccccccccccccccc
Q 042457 196 VKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN---------RTVVAGTHGYIAPELAY 266 (361)
Q Consensus 196 ~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~---------~~~~~gt~~y~aPE~~~ 266 (361)
+.+++.|+.|+|... ++||++|.|++|.++.++..||+.|+.+......... .........|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 344559999999885 8999999999999999999999999988655432111 11123456899999999
Q ss_pred ccccCccchhhhHHHHHHHHHh-CCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCC
Q 042457 267 TMVVTEKCDVFGFGVVALEVLM-GRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRP 345 (361)
Q Consensus 267 ~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 345 (361)
+...+.++|+||+|+++|.+.. |+.-+.......... ......+....... .....++.+=+.+++..++.-||
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-~~~~~~~~~~~~~s----~~~p~el~~~l~k~l~~~~~~rp 257 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-FSRNLLNAGAFGYS----NNLPSELRESLKKLLNGDSAVRP 257 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhh-hhhccccccccccc----ccCcHHHHHHHHHHhcCCcccCc
Confidence 9888999999999999999995 555444332211111 11111110000000 11222466777789999999999
Q ss_pred CccccccCCCCCCCC
Q 042457 346 TMRRSFPNPEINPSL 360 (361)
Q Consensus 346 s~~eil~hp~~~~~~ 360 (361)
++.+++..|||.+..
T Consensus 258 ~~~~l~~~~ff~D~~ 272 (700)
T KOG2137|consen 258 TLDLLLSIPFFSDPG 272 (700)
T ss_pred chhhhhcccccCCch
Confidence 999999999998864
No 448
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.15 E-value=1.5e-09 Score=94.87 Aligned_cols=140 Identities=19% Similarity=0.139 Sum_probs=99.9
Q ss_pred eeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHH----------HHHHHHHHHhcCCCC--cceeeeEEEee-----C
Q 042457 97 IGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLE----------SFQTEARLLSQIRHR--NIVKLYGFCLH-----K 159 (361)
Q Consensus 97 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~----------~~~~e~~~l~~l~h~--niv~~~~~~~~-----~ 159 (361)
+-......|++..+ +|+.+.||......... ..+ .+.+|...+.++... ..++.+++... .
T Consensus 30 v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~-~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 30 FRELEGRRTLRFEL-AGKSYFLKWHRGTGWGE-IFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EecCCCceEEEEEE-CCEEEEEEEecCCcHHH-HhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 44444455778877 77889999774433111 111 367888888877432 33445555543 2
Q ss_pred CeEEEEEEeccCC-ChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC-------CCC
Q 042457 160 KCMFLIYKYMRRG-SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS-------KLE 231 (361)
Q Consensus 160 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~-------~~~ 231 (361)
...++|+|++++. +|.+++..... ...+......++.+++..+.-||.. |++|+|++++|||++. +..
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 3478999999886 78888753211 1355667789999999999999999 9999999999999975 467
Q ss_pred eEEeeecCccc
Q 042457 232 AFVADFGVARL 242 (361)
Q Consensus 232 ~kl~Dfg~~~~ 242 (361)
+.++||+.+..
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 89999998853
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.15 E-value=5.2e-10 Score=92.18 Aligned_cols=128 Identities=26% Similarity=0.342 Sum_probs=83.7
Q ss_pred eEEEEEeCCCCEEEEEEeccCcc------------------------hHHHHHHHHHHHHHHhcCCCC--cceeeeEEEe
Q 042457 104 SVYRAQLPSGKIVALKKLHHSET------------------------ELAFLESFQTEARLLSQIRHR--NIVKLYGFCL 157 (361)
Q Consensus 104 ~V~~~~~~~~~~vavK~~~~~~~------------------------~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~ 157 (361)
.||.|...+|..+|+|..+.... .........+|.+.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999988999999998754211 111224567899999999765 456665442
Q ss_pred eCCeEEEEEEecc--CCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHH-HHcCCCCCeEEeCCCCCCeeeCCCCCeEE
Q 042457 158 HKKCMFLIYKYMR--RGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSY-LHYDCIPSIVHRDISSNNILLNSKLEAFV 234 (361)
Q Consensus 158 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~-Lh~~~~~~i~H~dlk~~Nill~~~~~~kl 234 (361)
.-.+||||++ |..+..+.... ++......++.+++..+.. +|.. +++||||++.||+++++ .+.|
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence 2379999998 55554433322 1123456678888886665 5677 99999999999999988 9999
Q ss_pred eeecCccccC
Q 042457 235 ADFGVARLLH 244 (361)
Q Consensus 235 ~Dfg~~~~~~ 244 (361)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999886543
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.04 E-value=1.1e-08 Score=91.61 Aligned_cols=195 Identities=16% Similarity=0.249 Sum_probs=127.7
Q ss_pred CCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCcceeeeEEEe------eC-CeEE
Q 042457 92 DIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQI-RHRNIVKLYGFCL------HK-KCMF 163 (361)
Q Consensus 92 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~------~~-~~~~ 163 (361)
.....||+|+-+.+|..---.+ .+-|+......... . +-...|... .||-+-.-+.+=+ +. ...-
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d--~VAKIYh~Pppa~~--a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iG 86 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRD--QVAKIYHAPPPAAQ--A---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIG 86 (637)
T ss_pred CCCccccCCccceeeecchhhc--hhheeecCCCchHH--H---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeE
Confidence 3456699999999997632122 34466554433211 1 223333433 5664433122111 11 2256
Q ss_pred EEEEeccCCC-hhhhhc---cCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecC
Q 042457 164 LIYKYMRRGS-LFCVLR---NDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGV 239 (361)
Q Consensus 164 lv~e~~~~g~-L~~~l~---~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~ 239 (361)
++|...++.- ...+++ ....-...+|...++.++.+|.+.+-||.. |.+-||++++|+|+.+++.+.|.|-..
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccc
Confidence 6777766542 222221 122233579999999999999999999999 999999999999999999999988554
Q ss_pred ccccCCCCCCccccccccccccccccc-----ccccCccchhhhHHHHHHHHHhC-CCCCCCcc
Q 042457 240 ARLLHSDSSNRTVVAGTHGYIAPELAY-----TMVVTEKCDVFGFGVVALEVLMG-RHPGDLLS 297 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg-~~p~~~~~ 297 (361)
-... .+.......+|...|.+||.-. +..-+...|-|.||+++++++.| ++||....
T Consensus 164 fqi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~ 226 (637)
T COG4248 164 FQIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIP 226 (637)
T ss_pred eeec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCccc
Confidence 3322 2222333456889999999644 34456789999999999999985 99997654
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.02 E-value=4.1e-09 Score=89.52 Aligned_cols=138 Identities=23% Similarity=0.250 Sum_probs=100.1
Q ss_pred CCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcch--------------------HHHHHHHHHHHHHHhcCCCC--c
Q 042457 91 FDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETE--------------------LAFLESFQTEARLLSQIRHR--N 148 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------------------~~~~~~~~~e~~~l~~l~h~--n 148 (361)
..+.+.||-|.-+.||.|..++|.++|||.=+....+ .-......+|.+.|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 4556789999999999999999999999964332111 01123456788999988654 5
Q ss_pred ceeeeEEEeeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC
Q 042457 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS 228 (361)
Q Consensus 149 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~ 228 (361)
+.+.+++ +.-.+|||+.+|.-|...- ++....-.++..|++-+.-+-.. |++|||++.-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 6655554 3347999999987765432 22334445666666666666666 9999999999999999
Q ss_pred CCCeEEeeecCcccc
Q 042457 229 KLEAFVADFGVARLL 243 (361)
Q Consensus 229 ~~~~kl~Dfg~~~~~ 243 (361)
+|.+.++||-.+...
T Consensus 238 dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 238 DGDIVVIDWPQAVPI 252 (304)
T ss_pred CCCEEEEeCcccccC
Confidence 999999999766543
No 452
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.00 E-value=5.4e-09 Score=95.77 Aligned_cols=170 Identities=17% Similarity=0.291 Sum_probs=126.0
Q ss_pred CceeEEEEEe-CCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEee----CCeEEEEEEeccCC-Ch
Q 042457 101 GYGSVYRAQL-PSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLH----KKCMFLIYKYMRRG-SL 174 (361)
Q Consensus 101 ~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~g-~L 174 (361)
...+.|++.. .||..|++|+++...... ...-..-++.++++.|+|+|++..++.. +..+++||+|.++. +|
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~--~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQS--TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccC--cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 3457889854 489999999994332211 1122356889999999999999998873 45689999999864 56
Q ss_pred hhhhccCC------------ccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccc
Q 042457 175 FCVLRNDD------------EAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 175 ~~~l~~~~------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~ 242 (361)
.++--... .....++..+|.++.|+..||.++|+. |+..+-|.+++|+++++.+++|+.-|....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence 55542211 122467788999999999999999999 999999999999999999999988887665
Q ss_pred cCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHHHhCCCC
Q 042457 243 LHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHP 292 (361)
Q Consensus 243 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 292 (361)
+..+.. |-+.+ -.+-|.=.||.+++.|.||..-
T Consensus 443 l~~d~~--------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 443 LQEDPT--------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred ecCCCC--------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 543330 11111 1356899999999999999644
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.85 E-value=7.5e-08 Score=79.97 Aligned_cols=140 Identities=16% Similarity=0.100 Sum_probs=102.0
Q ss_pred eeecCceeEEEEEeCCCCEEEEEEeccCcc-h---HHHHHHHHHHHHHHhcCCC--CcceeeeEEEe-eC----CeEEEE
Q 042457 97 IGTGGYGSVYRAQLPSGKIVALKKLHHSET-E---LAFLESFQTEARLLSQIRH--RNIVKLYGFCL-HK----KCMFLI 165 (361)
Q Consensus 97 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~---~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~-~~----~~~~lv 165 (361)
-|.||-+.|++..+ +|+.+-+|+-...-. . .-....|.+|+..+.++.. -.+.+.. ++. .. -..+||
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 46688899999888 555799997652111 1 1123678899999988853 2244444 332 21 246899
Q ss_pred EEeccC-CChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCC--eEEeeecCccc
Q 042457 166 YKYMRR-GSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLE--AFVADFGVARL 242 (361)
Q Consensus 166 ~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~--~kl~Dfg~~~~ 242 (361)
+|-+.+ -+|.+++.+... .+.+...+..++.+++..+.-||.. ++.|+|+.+.||+++.++. +.++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~-~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV-SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCc-CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997764 478888765432 2467778889999999999999999 9999999999999986667 89999987654
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.82 E-value=3.3e-08 Score=83.48 Aligned_cols=106 Identities=22% Similarity=0.318 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhcCC--CCcceeeeEEEeeCC----eEEEEEEeccCC-ChhhhhccCCccCCCCHHHHHHHHHHHHHHHH
Q 042457 132 ESFQTEARLLSQIR--HRNIVKLYGFCLHKK----CMFLIYKYMRRG-SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALS 204 (361)
Q Consensus 132 ~~~~~e~~~l~~l~--h~niv~~~~~~~~~~----~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~ 204 (361)
....+|...+..+. .-...+.+++..... ..++|+|++++. +|.+++..... .+......++.+++..++
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLIA 132 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHHH
Confidence 34667777777764 233556666666532 458999999885 79998876332 556677899999999999
Q ss_pred HHHcCCCCCeEEeCCCCCCeeeCCCC---CeEEeeecCcccc
Q 042457 205 YLHYDCIPSIVHRDISSNNILLNSKL---EAFVADFGVARLL 243 (361)
Q Consensus 205 ~Lh~~~~~~i~H~dlk~~Nill~~~~---~~kl~Dfg~~~~~ 243 (361)
-||.. +++|+|+++.|||++.+. .+.++||+-++..
T Consensus 133 ~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999 999999999999998887 7899999987653
No 455
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.77 E-value=5.9e-08 Score=91.88 Aligned_cols=143 Identities=22% Similarity=0.250 Sum_probs=92.5
Q ss_pred CeeeecCceeEEEEEeCCCCEEEEEEeccCcch----------------------------HHHHH----------HHHH
Q 042457 95 YCIGTGGYGSVYRAQLPSGKIVALKKLHHSETE----------------------------LAFLE----------SFQT 136 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------------~~~~~----------~~~~ 136 (361)
.-|+.++-|.||+|++.+|+.||||+.+.+-.. .+..+ ++..
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 568999999999999999999999998653211 00011 2334
Q ss_pred HHHHHhcCC----CCcceeeeEEEee-CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHH-HHHHHcCC
Q 042457 137 EARLLSQIR----HRNIVKLYGFCLH-KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHA-LSYLHYDC 210 (361)
Q Consensus 137 e~~~l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~-l~~Lh~~~ 210 (361)
|...+.+++ +..-+++=.++.+ .+...|+|||++|..+.+....... ..+... ++..++++ +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~--g~d~k~---ia~~~~~~f~~q~~~d- 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA--GIDRKE---LAELLVRAFLRQLLRD- 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc--CCCHHH---HHHHHHHHHHHHHHhc-
Confidence 554444442 2222333334433 4557899999999999887422211 244333 33333332 2222223
Q ss_pred CCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCC
Q 042457 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS 245 (361)
Q Consensus 211 ~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 245 (361)
|++|+|..|.||+++.++++.+.|||+...+..
T Consensus 285 --gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 --GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred --CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 999999999999999999999999999877643
No 456
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.71 E-value=4e-07 Score=75.94 Aligned_cols=141 Identities=16% Similarity=0.203 Sum_probs=96.2
Q ss_pred HHhcCCCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHH-HHHH------HHHHHHHHhcCCC---CcceeeeEE
Q 042457 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELA-FLES------FQTEARLLSQIRH---RNIVKLYGF 155 (361)
Q Consensus 86 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-~~~~------~~~e~~~l~~l~h---~niv~~~~~ 155 (361)
....+|...+.+-......|.+-.. +|..+++|..+......+ .... ..+++..+.+++. .....++..
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 4677888888888888888888888 778899998876543221 1111 2233444444432 233333333
Q ss_pred Eee-----CCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCC
Q 042457 156 CLH-----KKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKL 230 (361)
Q Consensus 156 ~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~ 230 (361)
... ....+++|||++|..|.++.. ++. .+...+.+++.-||+. |++|+|..|.|+++++++
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~~ 172 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNNG 172 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECCc
Confidence 332 234678999999998876542 222 3556678889999999 999999999999999654
Q ss_pred CeEEeeecCccc
Q 042457 231 EAFVADFGVARL 242 (361)
Q Consensus 231 ~~kl~Dfg~~~~ 242 (361)
++++||+..+.
T Consensus 173 -i~iID~~~k~~ 183 (229)
T PF06176_consen 173 -IRIIDTQGKRM 183 (229)
T ss_pred -EEEEECccccc
Confidence 99999987653
No 457
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.70 E-value=4.4e-07 Score=77.65 Aligned_cols=132 Identities=16% Similarity=0.185 Sum_probs=84.4
Q ss_pred CeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCc--ceeeeEEEeeCCeEEEEEEeccCC
Q 042457 95 YCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRN--IVKLYGFCLHKKCMFLIYKYMRRG 172 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~g 172 (361)
..||+|..+.||+. .|..+++|....... .....+|.+.++.+..-. +.+.++++...+...+|||+++|.
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~----~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~ 79 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGFD----KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK 79 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCCC----HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence 45899999999984 245678888765332 244578999998885433 467778887777788999999986
Q ss_pred C-hhhhhccCCccCCCCHHHHHHHHHHHHHHH---------------------------------------HHHHcC-CC
Q 042457 173 S-LFCVLRNDDEAIQLDWTKRVNIVKSMAHAL---------------------------------------SYLHYD-CI 211 (361)
Q Consensus 173 ~-L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l---------------------------------------~~Lh~~-~~ 211 (361)
+ +...+.. +......++..+++.+ .+|... ..
T Consensus 80 ~~~~~~~~~-------~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~ 152 (226)
T TIGR02172 80 RSFSRIISD-------NPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDT 152 (226)
T ss_pred cchhhhhcC-------CHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCC
Confidence 3 2211110 0011111111112211 222211 12
Q ss_pred CCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 212 PSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 212 ~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
+.++|+|+.|.||++++++ +.++||+.+.
T Consensus 153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 3578999999999999888 9999999874
No 458
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.63 E-value=1.4e-06 Score=73.61 Aligned_cols=155 Identities=21% Similarity=0.248 Sum_probs=100.3
Q ss_pred cCHHHHHHHhcCCCCcCee---eecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHH----------------------
Q 042457 79 ITFEEIIVATEDFDIKYCI---GTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLES---------------------- 133 (361)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l---g~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~---------------------- 133 (361)
.+++.+....++..+.... +.|.-+.||+|...++..+|+|+.+.....-.....
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 4566666666666665554 456667899998888999999998754322111111
Q ss_pred HHHHHHHHhcCC--CCcceeeeEEEeeCCeEEEEEEeccCCC-hhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCC
Q 042457 134 FQTEARLLSQIR--HRNIVKLYGFCLHKKCMFLIYKYMRRGS-LFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDC 210 (361)
Q Consensus 134 ~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~g~-L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~ 210 (361)
..+|+..|+++. +=.+.+-+++. .-.|||||+.... -.-.|... .+.......+..++++.+.-|-...
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv----~~e~~e~~~~~~~~v~~~~~l~~~a 186 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKDV----PLELEEAEGLYEDVVEYMRRLYKEA 186 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcccC----CcCchhHHHHHHHHHHHHHHHHHhc
Confidence 224555555542 22223333322 2368999986542 12222222 2333356778888889988888733
Q ss_pred CCCeEEeCCCCCCeeeCCCCCeEEeeecCccccC
Q 042457 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244 (361)
Q Consensus 211 ~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 244 (361)
++||+||+.-|||+. ++.+.|+|+|-+....
T Consensus 187 --~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 187 --GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred --CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 999999999999999 7899999999887654
No 459
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.54 E-value=3.1e-07 Score=91.98 Aligned_cols=203 Identities=16% Similarity=0.180 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHhcCCCCcceeeeEEEeeCCeE----EEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHH
Q 042457 131 LESFQTEARLLSQIRHRNIVKLYGFCLHKKCM----FLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYL 206 (361)
Q Consensus 131 ~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~----~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L 206 (361)
+.....|...+.++.|+|++.+++|....... .+..+++...++...++... ..+....+.+..++..|+.|+
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~---~i~~~~~r~~~~~~~~GL~~~ 302 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG---SIPLETLRILHQKLLEGLAYL 302 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc---ccCHHHHHHHHHHHhhhHHHH
Confidence 34455677888889999999999998765433 24457888888888887665 578888899999999999999
Q ss_pred HcCCCCCeEEeCCCCC---CeeeCCCCCeEEe--eecCccccCCCCCCcccccccccccccccccccccCc--cchhhhH
Q 042457 207 HYDCIPSIVHRDISSN---NILLNSKLEAFVA--DFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTE--KCDVFGF 279 (361)
Q Consensus 207 h~~~~~~i~H~dlk~~---Nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--~~Dv~sl 279 (361)
|+. ...|.-|..+ +--.+.++...++ ||+.......... ......+..|.++|......+.. ..|+|++
T Consensus 303 h~~---~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~-~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~l 378 (1351)
T KOG1035|consen 303 HSL---SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK-SFSDLLAEIRNADEDLKENTAKKSRLTDLWCL 378 (1351)
T ss_pred HHh---ccceeEEecccccccccCccceeecchhhhcccccCCCccc-chhhcCccccccccccccccchhhhhhHHHHH
Confidence 998 5555555555 4455666667766 8888776543322 22223455678888766555444 4799999
Q ss_pred HHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHHHHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 280 GVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVSKIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 280 G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
|.....+..|..+-..... ....+.... . . .......+|+..++++|+++.+++.|+|++.
T Consensus 379 gll~~~~~~~~~i~~~~~~------~~~~l~~~~----~-----~---~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 379 GLLLLQLSQGEDISEKSAV------PVSLLDVLS----T-----S---ELLDALPKCLDEDSEERLSALELLTHPFLRF 439 (1351)
T ss_pred HHHHhhhhhcCcccccccc------hhhhhcccc----c-----h---hhhhhhhhhcchhhhhccchhhhhhchhccc
Confidence 9999999988765221110 001111100 0 0 2556666999999999999999999999875
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.45 E-value=4.2e-06 Score=71.95 Aligned_cols=142 Identities=20% Similarity=0.204 Sum_probs=82.1
Q ss_pred CeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCC--cceeeeEEEee---CCeEEEEEEec
Q 042457 95 YCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHR--NIVKLYGFCLH---KKCMFLIYKYM 169 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~---~~~~~lv~e~~ 169 (361)
+.++.|..+.||+....+ ..+++|..... .....+..|..+++.+... .+.+++.++.. ....+++|+++
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i 77 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYI 77 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEe
Confidence 568999999999999866 68999997654 2235667888888877432 35666765543 33578999999
Q ss_pred cCCChhh----------------hh---ccC-CccCCCCHHH---------HHHH------------HHHHHH-HHHHHH
Q 042457 170 RRGSLFC----------------VL---RND-DEAIQLDWTK---------RVNI------------VKSMAH-ALSYLH 207 (361)
Q Consensus 170 ~~g~L~~----------------~l---~~~-~~~~~l~~~~---------~~~i------------~~~i~~-~l~~Lh 207 (361)
++..+.. .+ +.. .......+.. .... ...+.+ .+..++
T Consensus 78 ~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (239)
T PF01636_consen 78 PGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELE 157 (239)
T ss_dssp SSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHH
Confidence 9988877 11 111 0000111100 0000 111222 233333
Q ss_pred c----CCCCCeEEeCCCCCCeeeC-CCCCeEEeeecCcc
Q 042457 208 Y----DCIPSIVHRDISSNNILLN-SKLEAFVADFGVAR 241 (361)
Q Consensus 208 ~----~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfg~~~ 241 (361)
. .....++|+|+.+.||+++ +++.+.|+||+.+.
T Consensus 158 ~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 158 ALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred hhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 2 1234799999999999999 66666899998764
No 461
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.42 E-value=1.9e-06 Score=71.38 Aligned_cols=104 Identities=23% Similarity=0.320 Sum_probs=82.8
Q ss_pred HHHHHHhcCCC-CcceeeeEEEeeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCe
Q 042457 136 TEARLLSQIRH-RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSI 214 (361)
Q Consensus 136 ~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i 214 (361)
.|.-+++.+++ +++.+++|+|-+ +++.||...+++...-..-..-...+|..+.+|+.++++.+.++++.....+
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~ 83 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF 83 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 57788888876 699999999943 6799999877665321110011146899999999999999999999665578
Q ss_pred EEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 215 VHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 215 ~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
..+|++++|+-+++++++|++|...+...
T Consensus 84 ~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 84 YLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEeecchHHeEEeCCCcEEEEechhcchh
Confidence 89999999999999999999999877544
No 462
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.41 E-value=2.5e-08 Score=93.65 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=156.1
Q ss_pred CcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCc-ceeeeEEEeeCCeEEEEEEeccC
Q 042457 93 IKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRN-IVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 93 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
.-+.+++|++++++|.+-.-.+....+.+... ....-++++|.+++||| .++.++-+..++..+++++++.+
T Consensus 246 ~fh~fvK~altknpKkRptaeklL~h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~ 318 (829)
T KOG0576|consen 246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICST 318 (829)
T ss_pred HHHHHHHHHhcCCCccCCChhhheeceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcC
Confidence 34457899999999986533333345544332 33446889999999999 77888888888889999999987
Q ss_pred C-ChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCc
Q 042457 172 G-SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR 250 (361)
Q Consensus 172 g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 250 (361)
+ +-..-... ....+...+...+.+.-.++++++|+. .-+|+| ||+..+ +..+.+||+....+.... ..
T Consensus 319 ~rs~~~~~~~--se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~ 387 (829)
T KOG0576|consen 319 GRSSALEMTV--SEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KP 387 (829)
T ss_pred CccccccCCh--hhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc-cc
Confidence 7 22211111 111344555667778888999999987 557888 777665 578999999887664432 34
Q ss_pred ccccccccccccccccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCCCCCCChhhHHHHHHHH
Q 042457 251 TVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAPSPIDDQTVIQDIILVS 330 (361)
Q Consensus 251 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 330 (361)
....+++.|+|||+...+.+....|+|++|.--.++--|-+|-..... ....+-.+.-.........+.. ..=.
T Consensus 388 ~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~-----~~~~~g~~p~s~~L~~~~aw~~-~~~~ 461 (829)
T KOG0576|consen 388 RTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPA-----VLPMIGNGPNSPMLTDKSAWSP-VFHR 461 (829)
T ss_pred ccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCcc-----ccCCCCCCCCccccchhhhcCc-cccc
Confidence 456689999999999999999999999999876777667666322100 0000000000000000000000 0000
Q ss_pred HHHhhhcCCCCCCCCCccccccCCCCCC
Q 042457 331 KIAFACLRSKPKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 331 ~li~~cl~~dP~~RPs~~eil~hp~~~~ 358 (361)
.+...|+...|..|+..-..+-|.+|+.
T Consensus 462 ~~~~~~~~g~P~~pkv~mgacfsKvfng 489 (829)
T KOG0576|consen 462 DFPAPCLNGLPPTPKVHMGACFSKVFNG 489 (829)
T ss_pred CCcccccCCCCCCCcchhhHHHHHHhcc
Confidence 2344788888999998888887776654
No 463
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.41 E-value=4.7e-06 Score=72.43 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=84.0
Q ss_pred eeecCc-eeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcceeeeEEEeeCCeEEEEEEeccCCCh
Q 042457 97 IGTGGY-GSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNIVKLYGFCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 97 lg~G~~-g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~L 174 (361)
|..|.+ ..||+.... +..+++|...... ...+.+|+++++.+. +--+.+++++....+..++|||+++|.++
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l 79 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPA 79 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccH
Confidence 444555 789999774 4778889876543 134557888887773 44466777877776678999999999877
Q ss_pred hhhhc-------------------cCCc-cCCCC--HHHHHHHHH--------------------HHHHHHHHHHc----
Q 042457 175 FCVLR-------------------NDDE-AIQLD--WTKRVNIVK--------------------SMAHALSYLHY---- 208 (361)
Q Consensus 175 ~~~l~-------------------~~~~-~~~l~--~~~~~~i~~--------------------~i~~~l~~Lh~---- 208 (361)
..... .... ...+. ......... .+......|-.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 159 (244)
T cd05150 80 AALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPA 159 (244)
T ss_pred hHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCC
Confidence 64321 1000 00111 000000000 01111222211
Q ss_pred CCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 209 ~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
...+.++|+|+.|.|||++++..+.|+||+.+.
T Consensus 160 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 160 EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred cCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 122468999999999999998778899998774
No 464
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.40 E-value=2.7e-06 Score=80.52 Aligned_cols=141 Identities=18% Similarity=0.171 Sum_probs=89.3
Q ss_pred CeeeecCceeEEEEEeCCCCEEEEEEeccCcch-----------------------------HHHHH------HHHHHHH
Q 042457 95 YCIGTGGYGSVYRAQLPSGKIVALKKLHHSETE-----------------------------LAFLE------SFQTEAR 139 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----------------------------~~~~~------~~~~e~~ 139 (361)
+.||.-+.|.||+|++++|+.||||+-+..-.. .+..+ +|..|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 569999999999999999999999987653221 00011 2344444
Q ss_pred HHhcC----CCCc---ceeeeEEEee-CCeEEEEEEeccCCChhhhh--ccCCccCCCCHHHHHHHHHHHHHHHHHHHcC
Q 042457 140 LLSQI----RHRN---IVKLYGFCLH-KKCMFLIYKYMRRGSLFCVL--RNDDEAIQLDWTKRVNIVKSMAHALSYLHYD 209 (361)
Q Consensus 140 ~l~~l----~h~n---iv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l--~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~ 209 (361)
-..++ .|-+ -|.+=.++.+ .....|+||||+|..+.+.- .+. .++...+..-+.+...-+-+-|
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~----gi~~~~i~~~l~~~~~~qIf~~-- 320 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR----GISPHDILNKLVEAYLEQIFKT-- 320 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc----CCCHHHHHHHHHHHHHHHHHhc--
Confidence 43333 3444 1222233333 34578999999999887653 333 2444443333333222222222
Q ss_pred CCCCeEEeCCCCCCeeeCC----CCCeEEeeecCccccC
Q 042457 210 CIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLH 244 (361)
Q Consensus 210 ~~~~i~H~dlk~~Nill~~----~~~~kl~Dfg~~~~~~ 244 (361)
|++|+|=.|.||+++. ++.+.+-|||+...+.
T Consensus 321 ---GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 321 ---GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred ---CCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 8999999999999983 6789999999987664
No 465
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.40 E-value=3.1e-06 Score=67.68 Aligned_cols=131 Identities=18% Similarity=0.242 Sum_probs=90.5
Q ss_pred CCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCccee-eeEEEeeCCeEEEEEEec
Q 042457 91 FDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVK-LYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~~ 169 (361)
......|++|.+|.||+|.+ .|..+|+|+-+.++. ...+..|++++..+.-.++.+ ++.|.. .++.|||.
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds~----r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i 94 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEW-RGGEVALKVRRRDSP----RRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYI 94 (201)
T ss_pred hhhhhhhhcccccEEEEeec-cCceEEEEEecCCcc----hhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhh
Confidence 34456799999999999999 556799998766544 367889999999888666554 333332 23559999
Q ss_pred cCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCC-CCCeeeCCCCCeEEeeecCcccc
Q 042457 170 RRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDIS-SNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 170 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk-~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
.|-.|.+.-... + .+-+..+++..--|... ||-|+.|+ |...++-+++.+.|+||.-|+.-
T Consensus 95 ~G~~L~~~~~~~------~----rk~l~~vlE~a~~LD~~---GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 95 DGRPLGKLEIGG------D----RKHLLRVLEKAYKLDRL---GIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred cCcchhhhhhcc------c----HHHHHHHHHHHHHHHHh---ccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 988886654321 1 23344555665555666 89999887 44444444459999999988744
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=98.28 E-value=1.7e-05 Score=80.89 Aligned_cols=80 Identities=19% Similarity=0.329 Sum_probs=57.6
Q ss_pred cCeeeecCceeEEEEEeCCC---CEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCcc--eeeeEEEeeC---CeEEE
Q 042457 94 KYCIGTGGYGSVYRAQLPSG---KIVALKKLHHSETELAFLESFQTEARLLSQIR-HRNI--VKLYGFCLHK---KCMFL 164 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni--v~~~~~~~~~---~~~~l 164 (361)
...++.|.++.+|+....++ ..+++|+........ ....+.+|+++++.+. |.++ .+++++|.+. +..|+
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~-~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ-SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc-cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 45688899999999877654 367888765432111 1246779999999985 6654 7888888764 46789
Q ss_pred EEEeccCCCh
Q 042457 165 IYKYMRRGSL 174 (361)
Q Consensus 165 v~e~~~~g~L 174 (361)
||||++|..+
T Consensus 122 VME~v~G~~~ 131 (822)
T PLN02876 122 IMEYLEGRIF 131 (822)
T ss_pred EEEecCCccc
Confidence 9999988654
No 467
>PRK10593 hypothetical protein; Provisional
Probab=98.23 E-value=4.2e-05 Score=68.41 Aligned_cols=78 Identities=21% Similarity=0.202 Sum_probs=57.3
Q ss_pred CCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCC---CcceeeeEEEeeC---CeEEEE
Q 042457 92 DIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRH---RNIVKLYGFCLHK---KCMFLI 165 (361)
Q Consensus 92 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~~---~~~~lv 165 (361)
.-.+.||.|..+.||.....+++ +++|..+.... ...+..|.+.++.+.. -.+.+++++|... +..++|
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~~----~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV 91 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQGN-PMPLMARSFST----PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL 91 (297)
T ss_pred heeeecCCccceeEEEEEcCCCC-EEEEEeccccc----chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence 33456999999999999875664 67777543111 1567789999988843 3678888888653 568999
Q ss_pred EEeccCCCh
Q 042457 166 YKYMRRGSL 174 (361)
Q Consensus 166 ~e~~~~g~L 174 (361)
||+++++++
T Consensus 92 mE~i~G~~~ 100 (297)
T PRK10593 92 LERLRGVSV 100 (297)
T ss_pred EeccCCEec
Confidence 999998765
No 468
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.22 E-value=4.7e-05 Score=63.38 Aligned_cols=134 Identities=21% Similarity=0.325 Sum_probs=91.4
Q ss_pred cCeeeecCceeEEEEEeCCCCEEEEEEeccCc--------------chHHHHHHHHHHHHHHhcCC------CCcceeee
Q 042457 94 KYCIGTGGYGSVYRAQLPSGKIVALKKLHHSE--------------TELAFLESFQTEARLLSQIR------HRNIVKLY 153 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~e~~~l~~l~------h~niv~~~ 153 (361)
...||+|+.-.||.- +++....||+..... ......++..+|+.....+. +.+|.+++
T Consensus 6 ~~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CcccccCCCceEEEC--CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 456999999888864 445557888887655 00111345556666555554 78999999
Q ss_pred EEEeeCCeEEEEEEeccCC------ChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeC
Q 042457 154 GFCLHKKCMFLIYKYMRRG------SLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLN 227 (361)
Q Consensus 154 ~~~~~~~~~~lv~e~~~~g------~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~ 227 (361)
|+..++...-+|+|.+.+. +|.+++.+.. ++. .+...+-+-..||-.. .|+.+|++|+||++.
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~----~~~----~~~~~L~~f~~~l~~~---~Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG----LTE----ELRQALDEFKRYLLDH---HIVIRDLNPHNIVVQ 152 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC----ccH----HHHHHHHHHHHHHHHc---CCeecCCCcccEEEE
Confidence 9999999999999987532 5677775442 444 3444455566677777 899999999999994
Q ss_pred CC--C--CeEEee-ecCc
Q 042457 228 SK--L--EAFVAD-FGVA 240 (361)
Q Consensus 228 ~~--~--~~kl~D-fg~~ 240 (361)
.. + .+.|+| ||..
T Consensus 153 ~~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 153 RRDSGEFRLVLIDGLGEK 170 (199)
T ss_pred ecCCCceEEEEEeCCCCc
Confidence 33 2 466666 4443
No 469
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.19 E-value=1.9e-05 Score=68.26 Aligned_cols=74 Identities=12% Similarity=0.223 Sum_probs=45.2
Q ss_pred CeeeecCce-eEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCC---cceeeeEEEeeC---CeEEEEEE
Q 042457 95 YCIGTGGYG-SVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHR---NIVKLYGFCLHK---KCMFLIYK 167 (361)
Q Consensus 95 ~~lg~G~~g-~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~---~~~~lv~e 167 (361)
+.++.|+.. .||+. +..+++|....... ...+..|.+.+..+... .+.+.++..... ...+++|+
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~~~----~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~ 74 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAAGY----AGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYR 74 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCccch----HHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEE
Confidence 346766665 58875 23477787554221 24677899888877532 344444444332 23588999
Q ss_pred eccCCChhh
Q 042457 168 YMRRGSLFC 176 (361)
Q Consensus 168 ~~~~g~L~~ 176 (361)
+++|.++.+
T Consensus 75 ~i~G~~l~~ 83 (235)
T cd05155 75 WLEGETATA 83 (235)
T ss_pred eecCCCCCc
Confidence 999987743
No 470
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.10 E-value=4.2e-05 Score=63.24 Aligned_cols=127 Identities=24% Similarity=0.451 Sum_probs=91.6
Q ss_pred cCCCCcCeeeecCc-eeEEEEEeCCCCEEEEEEecc---Ccc----------hH------HHHHHHHHHHHHHhcCC---
Q 042457 89 EDFDIKYCIGTGGY-GSVYRAQLPSGKIVALKKLHH---SET----------EL------AFLESFQTEARLLSQIR--- 145 (361)
Q Consensus 89 ~~~~~~~~lg~G~~-g~V~~~~~~~~~~vavK~~~~---~~~----------~~------~~~~~~~~e~~~l~~l~--- 145 (361)
.+++..+.||.|.- |.||+++. +|+.+|+|.+.. ... .. ....-|..|.+...+++
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 67888999999999 99999999 788999999322 000 00 23346788888888774
Q ss_pred CCcc--eeeeEEEeeCC------------------eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHH
Q 042457 146 HRNI--VKLYGFCLHKK------------------CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSY 205 (361)
Q Consensus 146 h~ni--v~~~~~~~~~~------------------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~ 205 (361)
+.++ |+++||..-.. ...||.||.+... .++. +-+.+|.+-+..
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~----~~~~~~~~dl~~ 179 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQI----RDIPQMLRDLKI 179 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccch----hHHHHHHHHHHH
Confidence 4566 99999985431 1356777765433 1222 335667777888
Q ss_pred HHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 206 LHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 206 Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
+|.. +|+-+|+++.|.. .-+|+|||.+
T Consensus 180 ~~k~---gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 180 LHKL---GIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHC---CeeeccCcccccc-----CCEEEecccC
Confidence 9999 9999999999987 4578999854
No 471
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.06 E-value=7.2e-05 Score=64.52 Aligned_cols=74 Identities=15% Similarity=0.150 Sum_probs=47.4
Q ss_pred CeeeecCceeEEEEEeCC--CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCc-ceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLPS--GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRN-IVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.|..|-...+|+....+ +..+++|........ ......|+.+++.+...+ ..++++.+. + .++|||++|
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~---~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i~G 76 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL---IIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFIPG 76 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc---eecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEeeCC
Confidence 456778888999998764 678999976543211 122336788888774333 344444332 2 479999998
Q ss_pred CChh
Q 042457 172 GSLF 175 (361)
Q Consensus 172 g~L~ 175 (361)
.++.
T Consensus 77 ~~l~ 80 (235)
T cd05157 77 RTLE 80 (235)
T ss_pred CcCC
Confidence 7763
No 472
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.00 E-value=6.9e-05 Score=65.60 Aligned_cols=138 Identities=12% Similarity=0.103 Sum_probs=77.7
Q ss_pred eeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcc-eeeeEEEeeCCeEEEEEEeccCCChh
Q 042457 97 IGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNI-VKLYGFCLHKKCMFLIYKYMRRGSLF 175 (361)
Q Consensus 97 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~L~ 175 (361)
+..|-.+.+|+... ++..+++|.......... -+...|..+++.+....+ .++++.+. -++|+||++|..+.
T Consensus 4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~--~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~ 76 (256)
T TIGR02721 4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALG--VDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVIT 76 (256)
T ss_pred CCCcCcCCeEEEEe-CCccEEEeeCCccccccc--CcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccc
Confidence 45678889999985 667788887654322110 134578888888754333 33444332 36899999987664
Q ss_pred hh-----------------hccCC-ccCCCCHHHH-HHHHHHH---------HHHHHHHHcC-----CCCCeEEeCCCCC
Q 042457 176 CV-----------------LRNDD-EAIQLDWTKR-VNIVKSM---------AHALSYLHYD-----CIPSIVHRDISSN 222 (361)
Q Consensus 176 ~~-----------------l~~~~-~~~~l~~~~~-~~i~~~i---------~~~l~~Lh~~-----~~~~i~H~dlk~~ 222 (361)
.. ++... ...+++.... .....++ ...+..+-.. ..+.++|+|+.|.
T Consensus 77 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~ 156 (256)
T TIGR02721 77 LDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY 156 (256)
T ss_pred cccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence 21 11111 0111222211 1111111 1112222111 1235899999999
Q ss_pred CeeeCCCCCeEEeeecCccc
Q 042457 223 NILLNSKLEAFVADFGVARL 242 (361)
Q Consensus 223 Nill~~~~~~kl~Dfg~~~~ 242 (361)
||++++++ +.++||..+..
T Consensus 157 Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 157 NLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cEEEeCCC-CEEEeccccCc
Confidence 99999876 78999998753
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.94 E-value=0.00022 Score=65.91 Aligned_cols=77 Identities=21% Similarity=0.195 Sum_probs=52.4
Q ss_pred CeeeecCceeEEEEEeCCC-CEEEEEEeccC-----cchHHHHHHHHHHHHHHhcCC---CCcceeeeEEEeeCCeEEEE
Q 042457 95 YCIGTGGYGSVYRAQLPSG-KIVALKKLHHS-----ETELAFLESFQTEARLLSQIR---HRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~-----~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv 165 (361)
+.||.|.+..||++...+| +.++||.-... .......+....|.+.|+.+. ..++.+++.+.. +..++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEEE
Confidence 4589999999999998777 48999984311 110112355667788887763 245666777633 557899
Q ss_pred EEeccCCC
Q 042457 166 YKYMRRGS 173 (361)
Q Consensus 166 ~e~~~~g~ 173 (361)
|||+++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998643
No 474
>PRK05231 homoserine kinase; Provisional
Probab=97.84 E-value=0.00062 Score=61.68 Aligned_cols=156 Identities=15% Similarity=0.134 Sum_probs=81.5
Q ss_pred CHHHHHHHhcCCCC-----cCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCC--Ccceee
Q 042457 80 TFEEIIVATEDFDI-----KYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRH--RNIVKL 152 (361)
Q Consensus 80 ~~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~ 152 (361)
+.+++...-+.|.+ .+.++.|....+|+.+..+| .+++|+.. ... . +....|...+..+.. -.+.+.
T Consensus 8 s~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~-~~~-~---~~l~~~~~~l~~L~~~glpvP~~ 81 (319)
T PRK05231 8 SDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQG-EYVLTLFE-RLT-A---EDLPFFLGLMQHLAARGVPVPAP 81 (319)
T ss_pred CHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCC-cEEEEEec-cCC-h---HHhHHHHHHHHHHHHCCCCCCcc
Confidence 34444443345544 24466677789999987665 58889875 211 1 222234444444321 113333
Q ss_pred eE------EEeeCCeEEEEEEeccCCChhhh--------------hccCCc--------cCCCCH-HHHHH---------
Q 042457 153 YG------FCLHKKCMFLIYKYMRRGSLFCV--------------LRNDDE--------AIQLDW-TKRVN--------- 194 (361)
Q Consensus 153 ~~------~~~~~~~~~lv~e~~~~g~L~~~--------------l~~~~~--------~~~l~~-~~~~~--------- 194 (361)
+. +....+..+++++|.+|..+... ++.... ...+.| .....
T Consensus 82 i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (319)
T PRK05231 82 VARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADE 161 (319)
T ss_pred eeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChh
Confidence 32 12235567899999998754211 111000 001111 11111
Q ss_pred ---HH-HHHHHHHHHHHcC----CCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 195 ---IV-KSMAHALSYLHYD----CIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 195 ---i~-~~i~~~l~~Lh~~----~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
.+ ..+...+..+... ...+++|+|+.+.||+++++...-|+||+.+.
T Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 162 QAALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred HHHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 11 1111222333211 23489999999999999977656899999874
No 475
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.81 E-value=0.00035 Score=62.53 Aligned_cols=142 Identities=16% Similarity=0.115 Sum_probs=83.3
Q ss_pred cCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCC--cceeeeEE------EeeCCeEEEE
Q 042457 94 KYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHR--NIVKLYGF------CLHKKCMFLI 165 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~------~~~~~~~~lv 165 (361)
.+.+..|....+|+....+ ..+++|+.... . ......|++++..+.+. .+.+.+.. ....+..+.+
T Consensus 19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~~-~----~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l 92 (296)
T cd05153 19 FEGISAGIENTNYFVTTDS-GRYVLTLFEKV-S----AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAAL 92 (296)
T ss_pred eecccCccccceEEEEeCC-CcEEEEEcCCC-C----hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEE
Confidence 3457778778999997744 46888987642 1 13455677777766432 24444432 1234567899
Q ss_pred EEeccCCChhhh----h----------ccC----Cc----cCCCCHHHHH----------HHHHHHHHHHHHHHc----C
Q 042457 166 YKYMRRGSLFCV----L----------RND----DE----AIQLDWTKRV----------NIVKSMAHALSYLHY----D 209 (361)
Q Consensus 166 ~e~~~~g~L~~~----l----------~~~----~~----~~~l~~~~~~----------~i~~~i~~~l~~Lh~----~ 209 (361)
++|++|..+... . +.. .. .....|.... .....+...+.++.. .
T Consensus 93 ~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~ 172 (296)
T cd05153 93 VEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSD 172 (296)
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhc
Confidence 999998776330 0 100 00 0111222211 011223334445443 1
Q ss_pred CCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 210 ~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
...+++|+|+.|.||+++++..+.|+||+.+.
T Consensus 173 ~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 173 LPRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 22379999999999999998777899998774
No 476
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.81 E-value=0.00023 Score=63.99 Aligned_cols=140 Identities=24% Similarity=0.266 Sum_probs=81.7
Q ss_pred CeeeecCceeEEEEEeCC-------CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCc-ceeeeEEEeeCCeEEEEE
Q 042457 95 YCIGTGGYGSVYRAQLPS-------GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRN-IVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 166 (361)
+.+..|-...+|+....+ ++.+++|........ ..+...|.+++..+...+ ..++++++.. ..|+
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~---~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~ 76 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVEL---LIDRERELVVFARLSERNLGPKLYGIFPN----GRIE 76 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcc---eechHHHHHHHHHHHhCCCCCceEEEeCC----Cchh
Confidence 345667777999998755 578999997654321 134457777777774322 3445555532 3589
Q ss_pred EeccCCChhhh-h----------------ccCCcc--------CCCCHHHHHH--------------------------H
Q 042457 167 KYMRRGSLFCV-L----------------RNDDEA--------IQLDWTKRVN--------------------------I 195 (361)
Q Consensus 167 e~~~~g~L~~~-l----------------~~~~~~--------~~l~~~~~~~--------------------------i 195 (361)
||++|..+... + +..... ...-|..... +
T Consensus 77 e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (302)
T cd05156 77 EFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLF 156 (302)
T ss_pred heeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHH
Confidence 99988776431 1 111100 0000111111 1
Q ss_pred HHHHHHHHHHHHc------CCCCCeEEeCCCCCCeeeCCC----CCeEEeeecCcc
Q 042457 196 VKSMAHALSYLHY------DCIPSIVHRDISSNNILLNSK----LEAFVADFGVAR 241 (361)
Q Consensus 196 ~~~i~~~l~~Lh~------~~~~~i~H~dlk~~Nill~~~----~~~kl~Dfg~~~ 241 (361)
...+...+..+.. .....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 157 ~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 157 LEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 1122223334432 233478999999999999985 789999999874
No 477
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.70 E-value=0.0012 Score=59.35 Aligned_cols=142 Identities=17% Similarity=0.127 Sum_probs=79.7
Q ss_pred CeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCC--cceeeeEEE------eeCCeEEEEE
Q 042457 95 YCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHR--NIVKLYGFC------LHKKCMFLIY 166 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~------~~~~~~~lv~ 166 (361)
..++.|....+|+.+..+| .+++|........ +....|.+++..+... .+.+++... ...+..++++
T Consensus 28 ~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~~~----~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~ 102 (307)
T TIGR00938 28 KGIAEGVENSNYLLTTDVG-RYILTLYEKRVKA----EELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV 102 (307)
T ss_pred cccCCccccceEEEEeCCC-cEEEEEecCCCCH----HHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence 4466777789999887555 5778876543221 2233455655555321 234443321 1245678999
Q ss_pred EeccCCChhhh--------------hccCCcc---------CCCCHHHHH------------HHHHHHHHHHHHHHc---
Q 042457 167 KYMRRGSLFCV--------------LRNDDEA---------IQLDWTKRV------------NIVKSMAHALSYLHY--- 208 (361)
Q Consensus 167 e~~~~g~L~~~--------------l~~~~~~---------~~l~~~~~~------------~i~~~i~~~l~~Lh~--- 208 (361)
+|++|..+... ++..... ..-.|.... .....+.+.++++..
T Consensus 103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~ 182 (307)
T TIGR00938 103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP 182 (307)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence 99988654211 1110000 001121110 011123334555542
Q ss_pred -CCCCCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 209 -DCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 209 -~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
....+++|+|+.+.|+++++++...|+||+.+.
T Consensus 183 ~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 183 RDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred hcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 223489999999999999998777899999874
No 478
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.50 E-value=0.0026 Score=56.80 Aligned_cols=137 Identities=18% Similarity=0.285 Sum_probs=85.2
Q ss_pred eeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCC--CcceeeeEEEeeCC--eEEEEEEeccCC
Q 042457 97 IGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRH--RNIVKLYGFCLHKK--CMFLIYKYMRRG 172 (361)
Q Consensus 97 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~--~~~lv~e~~~~g 172 (361)
+..|..-.+|..... ++.++++ ...............+|+..++.+.- --+.+.++.|.++. ..+.||+|++|.
T Consensus 33 ~~~G~sn~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe 110 (321)
T COG3173 33 ISGGWSNDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGE 110 (321)
T ss_pred ccCCcccceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecce
Confidence 333444455555543 7778888 33211112223555677888877642 34556678887766 779999999986
Q ss_pred ChhhhhccCCccCCCCHHHHHHHH-HHHHHHHHHHHcC------------------------------------------
Q 042457 173 SLFCVLRNDDEAIQLDWTKRVNIV-KSMAHALSYLHYD------------------------------------------ 209 (361)
Q Consensus 173 ~L~~~l~~~~~~~~l~~~~~~~i~-~~i~~~l~~Lh~~------------------------------------------ 209 (361)
.+.+.+.... .. .+++ ..+++.|+-||+-
T Consensus 111 ~~~~~~~~~~----~~----~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~ 182 (321)
T COG3173 111 VVWSALPPES----LG----RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADR 182 (321)
T ss_pred eccCcCCccc----ch----HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHH
Confidence 5544432211 11 1122 2555555555543
Q ss_pred --------C-----CCCeEEeCCCCCCeeeCCCCCeEEeeecCcccc
Q 042457 210 --------C-----IPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243 (361)
Q Consensus 210 --------~-----~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 243 (361)
. .+.++|||+.+.|++++++.-+-+.||+++..-
T Consensus 183 ~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 183 LIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred HHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 1 146899999999999999988999999998643
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.44 E-value=0.00025 Score=62.47 Aligned_cols=137 Identities=15% Similarity=0.143 Sum_probs=92.9
Q ss_pred CCCcCeeeecCceeEEEEEeCCCCEEEEEEeccCcc------------------hHHH--HHHHHHHHHHHhcCC-CC-c
Q 042457 91 FDIKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSET------------------ELAF--LESFQTEARLLSQIR-HR-N 148 (361)
Q Consensus 91 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------------------~~~~--~~~~~~e~~~l~~l~-h~-n 148 (361)
+++.+.||-|.-+.+|.+-..+|++.++|.-+.... +.-. .-...+|...|+.+. |. -
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 677889999999999999998999999885322111 0000 113446777777774 22 2
Q ss_pred ceeeeEEEeeCCeEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCC
Q 042457 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNS 228 (361)
Q Consensus 149 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~ 228 (361)
+.+.+++ +.-++|||++.+-.|...-+- .+..+ +...+...+--|..+ |++|||.+-=||++++
T Consensus 174 VPkpiD~----~RH~Vvmelv~g~Pl~~v~~v------~d~~~---ly~~lm~~Iv~la~~---GlIHgDFNEFNimv~d 237 (465)
T KOG2268|consen 174 VPKPIDH----NRHCVVMELVDGYPLRQVRHV------EDPPT---LYDDLMGLIVRLANH---GLIHGDFNEFNIMVKD 237 (465)
T ss_pred CCCcccc----cceeeHHHhhcccceeeeeec------CChHH---HHHHHHHHHHHHHHc---CceecccchheeEEec
Confidence 3344443 345899999998888755332 12222 334444445556666 9999999999999999
Q ss_pred CCCeEEeeecCcccc
Q 042457 229 KLEAFVADFGVARLL 243 (361)
Q Consensus 229 ~~~~kl~Dfg~~~~~ 243 (361)
++.++++||--+...
T Consensus 238 d~~i~vIDFPQmvS~ 252 (465)
T KOG2268|consen 238 DDKIVVIDFPQMVST 252 (465)
T ss_pred CCCEEEeechHhhcc
Confidence 999999999865443
No 480
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.44 E-value=0.003 Score=56.82 Aligned_cols=142 Identities=23% Similarity=0.287 Sum_probs=94.7
Q ss_pred CcCeeeecCceeEEEEEeCCCCEEEEEEeccCcc-----------------------hHHHHH-HHHHHHHHHhcCCCCc
Q 042457 93 IKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSET-----------------------ELAFLE-SFQTEARLLSQIRHRN 148 (361)
Q Consensus 93 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~-~~~~e~~~l~~l~h~n 148 (361)
+..+|..|--+.||.+.-.+|..+|||+.+.+-. ....++ =...|++-|.+++...
T Consensus 148 inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG 227 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG 227 (520)
T ss_pred cccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 4457888999999999998999999998764311 000000 1224666666665444
Q ss_pred ceeeeEEEeeCCeEEEEEEeccCCChh-hhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeC
Q 042457 149 IVKLYGFCLHKKCMFLIYKYMRRGSLF-CVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLN 227 (361)
Q Consensus 149 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~ 227 (361)
|..- .-... ..-.|||+|+...... -.|+.. .++...+..+-.+++.-|.-|.+.| ++||.||+=-|+|+.
T Consensus 228 IP~P-ePIlL-k~hVLVM~FlGrdgw~aPkLKd~----~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyh 299 (520)
T KOG2270|consen 228 IPCP-EPILL-KNHVLVMEFLGRDGWAAPKLKDA----SLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYH 299 (520)
T ss_pred CCCC-Cceee-ecceEeeeeccCCCCcCcccccc----cCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEE
Confidence 3211 11111 1246899998533322 222222 4677778888889999999998887 899999999999987
Q ss_pred CCCCeEEeeecCcccc
Q 042457 228 SKLEAFVADFGVARLL 243 (361)
Q Consensus 228 ~~~~~kl~Dfg~~~~~ 243 (361)
+ |.+.|+|.+-+...
T Consensus 300 d-G~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 300 D-GKLYIIDVSQSVEH 314 (520)
T ss_pred C-CEEEEEEccccccC
Confidence 6 47889998876543
No 481
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.44 E-value=0.00078 Score=59.65 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=48.1
Q ss_pred CcCeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC---CCcceeeeEEEeeCCeEEEEEEec
Q 042457 93 IKYCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIR---HRNIVKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 93 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~ 169 (361)
..+.++.|....+|+.. .+++.+.||.-.... ...|..|.+-|+.+. --.+.+.+++....+..+|++||.
T Consensus 21 ~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~-----~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 21 SIEPVSGGDINEAYRLD-TDGGSYFVKVNSESG-----RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp EEEEE--SSSSEEEEEE-TTS-EEEEEEEEGGG-----CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred eeEecCCCChhheEEEE-CCCccEEEEecChhh-----HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence 34568889999999988 478889999876322 245778888887773 456778889888877789999999
Q ss_pred cCC
Q 042457 170 RRG 172 (361)
Q Consensus 170 ~~g 172 (361)
+.+
T Consensus 95 ~~~ 97 (288)
T PF03881_consen 95 EMG 97 (288)
T ss_dssp ---
T ss_pred cCC
Confidence 876
No 482
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.41 E-value=0.00013 Score=67.84 Aligned_cols=191 Identities=17% Similarity=0.235 Sum_probs=106.0
Q ss_pred EEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCC-eEEEEEEeccCCChhhhhccCCc
Q 042457 105 VYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKK-CMFLIYKYMRRGSLFCVLRNDDE 183 (361)
Q Consensus 105 V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~ 183 (361)
++.|....|+.. ..-+...... ..+.....+++.+.|+|+..++.+..... ...+|+|++ +.||++.+.....
T Consensus 5 ~~~a~~~~~~~c-~nglplt~~s----~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~l 78 (725)
T KOG1093|consen 5 TFFAQEKPGDVC-SNGLPLTPNS----IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGNL 78 (725)
T ss_pred EEehhcCCCccc-cCCCcCCCcH----HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhccc
Confidence 455555455533 3333333322 45667788999999999999998877543 477889988 6799988865431
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcccccccccccccc
Q 042457 184 AIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE 263 (361)
Q Consensus 184 ~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 263 (361)
.... ++ .+ ++.|-+ + .+.+| -+. .. | |-
T Consensus 79 ----~~~s----------~~----~~---~~~~~~-----~-------~~~td-~~~---t~-------------~--~~ 106 (725)
T KOG1093|consen 79 ----KDES----------LL----AH---GVLHLN-----I-------IYITD-HFL---TK-------------Y--PS 106 (725)
T ss_pred ----chhh----------hc----cc---ccceeh-----h-------hhccc-ccc---cc-------------C--CC
Confidence 1000 00 11 333321 1 22233 000 00 0 00
Q ss_pred cccccccCccchhhhHHHHHHHHHhCCCCCCCcccCCcchhHhhhhcccCC---CCCCChhhHHHHHHHHHHHhhhcCCC
Q 042457 264 LAYTMVVTEKCDVFGFGVVALEVLMGRHPGDLLSSFNPKIMLIDLLDQRAP---SPIDDQTVIQDIILVSKIAFACLRSK 340 (361)
Q Consensus 264 ~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~d 340 (361)
. ..+|+||||+|.++.|+..|..-+...........+......... ........++....++++.+.|+-..
T Consensus 107 ~-----~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~ 181 (725)
T KOG1093|consen 107 P-----IGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLE 181 (725)
T ss_pred C-----CCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccc
Confidence 0 114999999999999999887664322211100000000000000 00000112233345788999999999
Q ss_pred CCCCCCccccccCCCCCC
Q 042457 341 PKSRPTMRRSFPNPEINP 358 (361)
Q Consensus 341 P~~RPs~~eil~hp~~~~ 358 (361)
|..||...++.+++-|.+
T Consensus 182 ~~ir~l~~~~~k~~i~~e 199 (725)
T KOG1093|consen 182 PIIRPLPMELSKRCSFTE 199 (725)
T ss_pred cccccchhHHhcCccHHH
Confidence 999999999999887754
No 483
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.37 E-value=1.4e-05 Score=82.53 Aligned_cols=163 Identities=12% Similarity=-0.003 Sum_probs=118.3
Q ss_pred HHHHHHHHHHhcCCCCcceeeeEEEee--CCeEEEEEEeccCCChhhhhccCCc-cCCCCHHHHHHHHHHHHHHHHHHHc
Q 042457 132 ESFQTEARLLSQIRHRNIVKLYGFCLH--KKCMFLIYKYMRRGSLFCVLRNDDE-AIQLDWTKRVNIVKSMAHALSYLHY 208 (361)
Q Consensus 132 ~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~ 208 (361)
+....|.+..+...|+++.....-... ....+..++++.+|.+.+.+-++.. ...++..-......+......-+|.
T Consensus 1274 emll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1274 EMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred HhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhh
Confidence 445556666667789888766554443 2356889999999999988866433 2234433333333443555555555
Q ss_pred CCCC--CeEEeCCCCCCeeeCCCCCeEEeeecCccccCCCCCCcccccccccccccccccccccCccchhhhHHHHHHHH
Q 042457 209 DCIP--SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVVTEKCDVFGFGVVALEV 286 (361)
Q Consensus 209 ~~~~--~i~H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 286 (361)
..+. --+|++||+-|.++..+..++++++|+.+.............+++-|++|+......++.++|+|..|+.+|+.
T Consensus 1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred cccCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 5432 36899999999999999999999999998544444445556688889999998888899899999999999999
Q ss_pred HhCCCCCC
Q 042457 287 LMGRHPGD 294 (361)
Q Consensus 287 ~tg~~p~~ 294 (361)
--|..+|-
T Consensus 1434 s~~n~~fi 1441 (2724)
T KOG1826|consen 1434 SDGNAYFI 1441 (2724)
T ss_pred hcccHHHH
Confidence 88877753
No 484
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.31 E-value=0.0031 Score=55.75 Aligned_cols=31 Identities=23% Similarity=0.443 Sum_probs=25.6
Q ss_pred CCeEEeCCCCCCeeeCCCCC-eEEeeecCccc
Q 042457 212 PSIVHRDISSNNILLNSKLE-AFVADFGVARL 242 (361)
Q Consensus 212 ~~i~H~dlk~~Nill~~~~~-~kl~Dfg~~~~ 242 (361)
+.++|+|+++.||++++++. .-|+||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 35899999999999997555 46999998754
No 485
>PLN02236 choline kinase
Probab=97.11 E-value=0.0065 Score=55.58 Aligned_cols=139 Identities=16% Similarity=0.230 Sum_probs=78.5
Q ss_pred eeeecCceeEEEEEeCC-----CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcc-eeeeEEEeeCCeEEEEEEec
Q 042457 96 CIGTGGYGSVYRAQLPS-----GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNI-VKLYGFCLHKKCMFLIYKYM 169 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~ 169 (361)
.+..|-...+|+..+.+ ++.+++|....... . .-+...|..+++.+...++ .++++.+... .|.+|+
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~--~-~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi 115 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVE--L-FFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFI 115 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCC--e-eechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEee
Confidence 34457778899987543 36789998765432 1 1223568888887754333 3455655332 589999
Q ss_pred cCCChhhh-----------------hccCC---ccCCCCHHHHHHHHHHH-----------------HHHHHHH----Hc
Q 042457 170 RRGSLFCV-----------------LRNDD---EAIQLDWTKRVNIVKSM-----------------AHALSYL----HY 208 (361)
Q Consensus 170 ~~g~L~~~-----------------l~~~~---~~~~l~~~~~~~i~~~i-----------------~~~l~~L----h~ 208 (361)
++.++... ++... .....-+.++.++..++ ...+..| ..
T Consensus 116 ~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~ 195 (344)
T PLN02236 116 HARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSG 195 (344)
T ss_pred CCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcc
Confidence 87666421 11111 00011233333333221 1112122 21
Q ss_pred -CCCCCeEEeCCCCCCeeeCC-CCCeEEeeecCcc
Q 042457 209 -DCIPSIVHRDISSNNILLNS-KLEAFVADFGVAR 241 (361)
Q Consensus 209 -~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfg~~~ 241 (361)
.....++|+|+++.|||+++ ++.+.++||..+.
T Consensus 196 ~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 196 DDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred cCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 12236899999999999986 4679999998875
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.07 E-value=0.0099 Score=55.01 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=48.7
Q ss_pred cCeeeecCceeEEEEEeCCCCEEEEEEec-----cCcchHHHHHHHHHHHHHHhcCC---CCcceeeeEEEeeCCeEEEE
Q 042457 94 KYCIGTGGYGSVYRAQLPSGKIVALKKLH-----HSETELAFLESFQTEARLLSQIR---HRNIVKLYGFCLHKKCMFLI 165 (361)
Q Consensus 94 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~-----~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv 165 (361)
.+.||.|....||+.... +..++||+-. .+....-....-..|.+.|+.+. ..++.+++.++.+. .+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~--~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTM--ALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCC--CEEE
Confidence 456899999999999874 5569999765 11110001223334566666553 34788888888843 5788
Q ss_pred EEeccC
Q 042457 166 YKYMRR 171 (361)
Q Consensus 166 ~e~~~~ 171 (361)
||++++
T Consensus 114 ME~L~~ 119 (418)
T PLN02756 114 MRYLEP 119 (418)
T ss_pred EeecCC
Confidence 999977
No 487
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.94 E-value=0.013 Score=52.85 Aligned_cols=30 Identities=20% Similarity=0.380 Sum_probs=27.4
Q ss_pred CCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 212 PSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 212 ~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
.+++|+|+.+.|+++++++.+.++||..+.
T Consensus 196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDETRGGYFINFEKAS 225 (309)
T ss_pred eeeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence 479999999999999999999999998875
No 488
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.79 E-value=0.019 Score=51.76 Aligned_cols=29 Identities=34% Similarity=0.563 Sum_probs=25.3
Q ss_pred CCeEEeCCCCCCeeeCCCCCeEEeeecCcc
Q 042457 212 PSIVHRDISSNNILLNSKLEAFVADFGVAR 241 (361)
Q Consensus 212 ~~i~H~dlk~~Nill~~~~~~kl~Dfg~~~ 241 (361)
.+++|+|+.+.||++++ +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 47999999999999988 578899999764
No 489
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.69 E-value=0.019 Score=52.23 Aligned_cols=139 Identities=14% Similarity=0.187 Sum_probs=76.3
Q ss_pred eeecCceeEEEEEeCC----CCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcc-eeeeEEEeeCCeEEEEEEeccC
Q 042457 97 IGTGGYGSVYRAQLPS----GKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNI-VKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 97 lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~ 171 (361)
|..|-...+|+....+ +..|++|+....... .-+..+|..+++.+..-++ .++++++. .+ +|.+|+++
T Consensus 22 l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~---~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~g 94 (330)
T PLN02421 22 ISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY---VIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFINA 94 (330)
T ss_pred eCCcccceEEEEEecCCCCCCceEEEEEecCCcCe---EechHHHHHHHHHHHhcCCCCceeEEeC-Cc---EeehhhcC
Confidence 4446677889886543 237889987653321 1233477888887754444 34555553 22 58999977
Q ss_pred CChhhh-----------------hccCCc--cC-CCCHHHHHHHHHHH----------------------HHHHHHH---
Q 042457 172 GSLFCV-----------------LRNDDE--AI-QLDWTKRVNIVKSM----------------------AHALSYL--- 206 (361)
Q Consensus 172 g~L~~~-----------------l~~~~~--~~-~l~~~~~~~i~~~i----------------------~~~l~~L--- 206 (361)
..+..- ++.... .. .--|..+.++..++ ..-+..+
T Consensus 95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 174 (330)
T PLN02421 95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI 174 (330)
T ss_pred CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence 665210 111110 00 11233332222221 1111111
Q ss_pred H-cC-CCCCeEEeCCCCCCeeeCC-CCCeEEeeecCccc
Q 042457 207 H-YD-CIPSIVHRDISSNNILLNS-KLEAFVADFGVARL 242 (361)
Q Consensus 207 h-~~-~~~~i~H~dlk~~Nill~~-~~~~kl~Dfg~~~~ 242 (361)
. .. ...-++|+|+.+.|||+++ ++.++++||..+..
T Consensus 175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 1 11 1124789999999999975 57899999998743
No 490
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=96.68 E-value=0.067 Score=48.39 Aligned_cols=136 Identities=20% Similarity=0.219 Sum_probs=80.2
Q ss_pred CceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC---CCc---ceeeeEEEe--eCC--eEEEEEEecc
Q 042457 101 GYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIR---HRN---IVKLYGFCL--HKK--CMFLIYKYMR 170 (361)
Q Consensus 101 ~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~n---iv~~~~~~~--~~~--~~~lv~e~~~ 170 (361)
.-..+|+....+|+. ++|..... .+. .+...|...+..+. .+= +...-|-.. ... ..+-+++|++
T Consensus 37 ~eN~~f~~~~~~g~~-iLki~~~~-~~~---~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~ 111 (331)
T COG2334 37 EENSNFRVQTEDGRY-ILKIYRPG-WTR---AEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLP 111 (331)
T ss_pred ccCceEEEEecCCCe-EEEEecCC-CCH---HHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecC
Confidence 456799998877776 88988766 222 44556677776663 221 222222211 123 6788999999
Q ss_pred CCChhh-hh--------------c----cC-----CccCCCCHHH-------------HHHHHHHHHHHHHHHHcCCC--
Q 042457 171 RGSLFC-VL--------------R----ND-----DEAIQLDWTK-------------RVNIVKSMAHALSYLHYDCI-- 211 (361)
Q Consensus 171 ~g~L~~-~l--------------~----~~-----~~~~~l~~~~-------------~~~i~~~i~~~l~~Lh~~~~-- 211 (361)
|..+.. .. + .. .......|.. -.....++...+..+.+...
T Consensus 112 G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~ 191 (331)
T COG2334 112 GRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAH 191 (331)
T ss_pred CcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhh
Confidence 988873 11 0 00 0011233320 01133344444444443321
Q ss_pred --CC---eEEeCCCCCCeeeCCCCC-eEEeeecCcc
Q 042457 212 --PS---IVHRDISSNNILLNSKLE-AFVADFGVAR 241 (361)
Q Consensus 212 --~~---i~H~dlk~~Nill~~~~~-~kl~Dfg~~~ 241 (361)
.. ++|+|+.|.||+++++.. +.++||+.+.
T Consensus 192 lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 192 LPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred CCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 23 899999999999999985 8899999874
No 491
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.52 E-value=0.027 Score=51.21 Aligned_cols=75 Identities=13% Similarity=0.212 Sum_probs=45.7
Q ss_pred eeeecCceeEEEEEeCCC-CEEEEEEec----c-CcchHHHHHHHHHHHHHHhcCC--CCc-ceeeeEEEeeCCeEEEEE
Q 042457 96 CIGTGGYGSVYRAQLPSG-KIVALKKLH----H-SETELAFLESFQTEARLLSQIR--HRN-IVKLYGFCLHKKCMFLIY 166 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~~-~~vavK~~~----~-~~~~~~~~~~~~~e~~~l~~l~--h~n-iv~~~~~~~~~~~~~lv~ 166 (361)
.||.|...-||++..++| +.|+||.-. . .....-..+...-|.+.|+... .|. +.+++.+ +.....+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence 479999999999987655 589999642 1 1111112344456777776653 343 4444433 334456899
Q ss_pred EeccCC
Q 042457 167 KYMRRG 172 (361)
Q Consensus 167 e~~~~g 172 (361)
|+++..
T Consensus 80 EdL~~~ 85 (370)
T TIGR01767 80 EDLSHH 85 (370)
T ss_pred hhCccc
Confidence 998553
No 492
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.27 E-value=0.55 Score=42.61 Aligned_cols=93 Identities=15% Similarity=0.120 Sum_probs=52.3
Q ss_pred cCHHHHHHHhcCCCCc--C--eeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCC--ccee-
Q 042457 79 ITFEEIIVATEDFDIK--Y--CIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHR--NIVK- 151 (361)
Q Consensus 79 ~~~~~~~~~~~~~~~~--~--~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~- 151 (361)
++-+.+..+.+.+.+. . ..-.+.-..||+....+|..+++|........ ......|.+.+..+... .++.
T Consensus 11 l~p~~~~~a~~~~g~~~~~~~~~l~s~eN~vy~v~~~~~~~~vlKv~r~~~~~---~~~i~~E~~~l~~L~~~gipv~~p 87 (325)
T PRK11768 11 LTPDLILDALESLGLRVDGRLLALNSYENRVYQFGDEDGRRVVAKFYRPERWS---DAQILEEHAFALELAEAEIPVVAP 87 (325)
T ss_pred CChHHHHHHHHHcCCCCccceEeeccccceEEEEecCCCCEEEEEEcCcccCC---HHHHHHHHHHHHHHHHCCCCCCCC
Confidence 4555555555554332 1 12234556799998888889999987643322 24455666666655211 1222
Q ss_pred --eeE--EEeeCCeEEEEEEeccCCCh
Q 042457 152 --LYG--FCLHKKCMFLIYKYMRRGSL 174 (361)
Q Consensus 152 --~~~--~~~~~~~~~lv~e~~~~g~L 174 (361)
.-| ....++..+.++++.+|...
T Consensus 88 ~~~~G~~~~~~~g~~~~l~~~~~G~~~ 114 (325)
T PRK11768 88 LAFNGQTLHEHQGFRFALFPRRGGRAP 114 (325)
T ss_pred ccCCCCEEEEECCEEEEEEeeeCCCCC
Confidence 112 22234567889999987654
No 493
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.27 E-value=0.073 Score=45.01 Aligned_cols=75 Identities=17% Similarity=0.219 Sum_probs=52.7
Q ss_pred CeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCC---CCcceeeeEEEeeCCeEEEEEEeccC
Q 042457 95 YCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIR---HRNIVKLYGFCLHKKCMFLIYKYMRR 171 (361)
Q Consensus 95 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~ 171 (361)
+.+.-|.--..|.... +...+.||+-.. .....|..|+.-|..+. --++.+++.+-...++.|+|+||.+-
T Consensus 22 ~~v~gG~inea~~v~d-g~~~~FvK~n~~-----~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~ 95 (286)
T COG3001 22 EEVSGGDINEAWRLRD-GTDPFFVKCNQR-----EQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPT 95 (286)
T ss_pred cccCCccccceeEeec-CCcceEEEecch-----hhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccC
Confidence 3355455555666555 566788887432 22467888887777664 35577888888889999999999988
Q ss_pred CChh
Q 042457 172 GSLF 175 (361)
Q Consensus 172 g~L~ 175 (361)
+.+.
T Consensus 96 ~~~d 99 (286)
T COG3001 96 GPLD 99 (286)
T ss_pred CCCC
Confidence 7664
No 494
>PRK06148 hypothetical protein; Provisional
Probab=96.23 E-value=0.11 Score=54.52 Aligned_cols=151 Identities=17% Similarity=0.235 Sum_probs=81.2
Q ss_pred HHhcCCCCc---CeeeecCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcC-------CCCcceeee-E
Q 042457 86 VATEDFDIK---YCIGTGGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQI-------RHRNIVKLY-G 154 (361)
Q Consensus 86 ~~~~~~~~~---~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~niv~~~-~ 154 (361)
...+.|.+. +.|+ |..-.+|+.+..+|..+++|+....... .....|...+..+ .-|.+++-. |
T Consensus 19 ~~~~~ygl~~~~~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~~----~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G 93 (1013)
T PRK06148 19 LLAQHFGISATATPLD-GERDLNFRLTTDDGADYILKIVNPSEPR----VESDFQTAALDHLAAVAPDLPVPRLIPSLSG 93 (1013)
T ss_pred HHHHHcCCceEEeecC-CcCCceEEEEeCCCCeEEEEEcCCccch----hHHHHHHHHHHHHHhhCCCCCcCeeeecCCC
Confidence 344455543 3353 4567889998888889999998765322 1222333444433 233333322 1
Q ss_pred ----EEee-CC--eEEEEEEeccCCChhhhhc---------------------c---CCccCCCCHHH------------
Q 042457 155 ----FCLH-KK--CMFLIYKYMRRGSLFCVLR---------------------N---DDEAIQLDWTK------------ 191 (361)
Q Consensus 155 ----~~~~-~~--~~~lv~e~~~~g~L~~~l~---------------------~---~~~~~~l~~~~------------ 191 (361)
.... ++ ..+.+++|.+|..+.+... . ......+.|..
T Consensus 94 ~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~ 173 (1013)
T PRK06148 94 ASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHF 173 (1013)
T ss_pred CeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhh
Confidence 1111 22 4677899999987754110 0 00001122211
Q ss_pred -----HHHHHHHHHHHHH-----HHHcCCCCCeEEeCCCCCCeeeCCCC--CeE-EeeecCccc
Q 042457 192 -----RVNIVKSMAHALS-----YLHYDCIPSIVHRDISSNNILLNSKL--EAF-VADFGVARL 242 (361)
Q Consensus 192 -----~~~i~~~i~~~l~-----~Lh~~~~~~i~H~dlk~~Nill~~~~--~~k-l~Dfg~~~~ 242 (361)
...++..+.+... .+. .....++|+|+.+.|||++.++ ++. |+|||.+..
T Consensus 174 i~d~~~r~~l~~~~~~~~~~v~p~l~-~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 174 IDDPEDRALVERFLARFERNVAPRLA-ALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHh-cCCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 1122223333222 121 2223799999999999999875 554 999998743
No 495
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.06 E-value=0.014 Score=49.31 Aligned_cols=29 Identities=34% Similarity=0.492 Sum_probs=20.8
Q ss_pred CeEEeCCCCCCeee-CCCCCeEEeeecCcc
Q 042457 213 SIVHRDISSNNILL-NSKLEAFVADFGVAR 241 (361)
Q Consensus 213 ~i~H~dlk~~Nill-~~~~~~kl~Dfg~~~ 241 (361)
.++|+|+.+.|||+ +.++.++++||..+.
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 57899999999999 888999999998874
No 496
>PTZ00384 choline kinase; Provisional
Probab=95.92 E-value=0.085 Score=48.90 Aligned_cols=73 Identities=19% Similarity=0.257 Sum_probs=43.1
Q ss_pred eeeecCceeEEEEEeCCCC-------EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcc-eeeeEEEeeCCeEEEEEE
Q 042457 96 CIGTGGYGSVYRAQLPSGK-------IVALKKLHHSETELAFLESFQTEARLLSQIRHRNI-VKLYGFCLHKKCMFLIYK 167 (361)
Q Consensus 96 ~lg~G~~g~V~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e 167 (361)
.|..|-...+|++...++. .|.++..... . +..-+-..|..+++.+...++ .++++.+.. +++.|
T Consensus 57 ~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~-~--~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~e 129 (383)
T PTZ00384 57 KMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTY-N--SLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQE 129 (383)
T ss_pred EeCCcccceEEEEEecCCCCCccccceEEEEeccCC-C--ceEeccHHHHHHHHHHHhCCCCCeEEEecCC----EEEEE
Confidence 4545778899999765431 2444442211 1 111223468888888865444 445555532 58999
Q ss_pred eccCCChh
Q 042457 168 YMRRGSLF 175 (361)
Q Consensus 168 ~~~~g~L~ 175 (361)
|++|..|.
T Consensus 130 fIeGr~l~ 137 (383)
T PTZ00384 130 WVEGNTMG 137 (383)
T ss_pred EeccccCC
Confidence 99988764
No 497
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.89 E-value=0.057 Score=48.83 Aligned_cols=72 Identities=19% Similarity=0.306 Sum_probs=57.1
Q ss_pred eEEEEEEeccCCChhhhhccCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 161 CMFLIYKYMRRGSLFCVLRNDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
..|++|++. |+++.. +. .-.|.+...++.+.+..++-+.... ..-|||+.-.|||++ +|++.|+||.++
T Consensus 300 y~yl~~kdh-gt~is~-ik------~~~~~e~lsff~s~~sil~~lekkf--~fehrnlt~~niLId-~GnvtLIDfkls 368 (488)
T COG5072 300 YLYLHFKDH-GTPISI-IK------ADRSEEELSFFWSCISILDILEKKF--PFEHRNLTLDNILID-EGNVTLIDFKLS 368 (488)
T ss_pred EEEEEEecC-Cceeee-ee------cccHHHHHHHHHHHHHHHhhhhhcC--Ccccccccccceeee-cCceEEEEeeee
Confidence 356666664 444432 21 3578899999999999999888776 788999999999999 999999999999
Q ss_pred ccc
Q 042457 241 RLL 243 (361)
Q Consensus 241 ~~~ 243 (361)
+.-
T Consensus 369 Rl~ 371 (488)
T COG5072 369 RLS 371 (488)
T ss_pred ecc
Confidence 843
No 498
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.60 E-value=0.08 Score=44.55 Aligned_cols=118 Identities=14% Similarity=0.120 Sum_probs=71.2
Q ss_pred cCceeEEEEEeCCCCEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCcceeeeEEEeeCCeEEEEEEeccCCChhhhhc
Q 042457 100 GGYGSVYRAQLPSGKIVALKKLHHSETELAFLESFQTEARLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCVLR 179 (361)
Q Consensus 100 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~ 179 (361)
++.++.-+++.+-|. ..+|++....... ...-|..+.+++.+++ .|+++..= ....+-++.|.|-....
T Consensus 73 ~gNsTl~~~kt~iG~-L~lKKi~slp~~~-~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i----- 141 (308)
T PF07387_consen 73 NGNSTLLIGKTKIGP-LFLKKIRSLPCCI-NDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI----- 141 (308)
T ss_pred CCceEEEEeccccch-hhhhhccCCCccc-chhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc-----
Confidence 444555555443333 4556555443321 1245677888888775 36666521 33356788898833111
Q ss_pred cCCccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEEeCCCCCCeeeCCCCCeEEeeecCc
Q 042457 180 NDDEAIQLDWTKRVNIVKSMAHALSYLHYDCIPSIVHRDISSNNILLNSKLEAFVADFGVA 240 (361)
Q Consensus 180 ~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~~ 240 (361)
. . ..++..=+..|.-.|+.. .+.+|||-.|+|||-|.+|.+||.|-+..
T Consensus 142 -------~---~-~N~i~agi~~L~~fH~~~-~~~lHGD~np~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 142 -------N---F-SNFITAGIKDLMDFHSEN-QHCLHGDCNPDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred -------c---h-hHHHHHhHHHHHHhhccC-CCeecCCCChhheeecCCCCEEecChhhh
Confidence 0 1 112222245666778543 38999999999999999999999998743
No 499
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=95.39 E-value=0.017 Score=33.80 Aligned_cols=14 Identities=21% Similarity=0.190 Sum_probs=5.2
Q ss_pred HHHHHHHHHHhhhc
Q 042457 37 LILVCIFTFLCLRR 50 (361)
Q Consensus 37 ~~~~~~~~~~~~~r 50 (361)
++++++++++.+||
T Consensus 24 I~~vl~~~l~~~~r 37 (40)
T PF08693_consen 24 IIIVLGAFLFFWYR 37 (40)
T ss_pred HHHHHHHHhheEEe
Confidence 33333333333343
No 500
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=95.37 E-value=0.0074 Score=45.47 Aligned_cols=30 Identities=20% Similarity=0.439 Sum_probs=17.2
Q ss_pred eEEEehHHHHHHHHHHHHHHHHhhhccccc
Q 042457 25 RLVVIILPIVLLLILVCIFTFLCLRRPKVR 54 (361)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 54 (361)
.++.|++++++++++++++++|+.||++++
T Consensus 65 ~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 65 AIIGIIFGVMAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred ceeehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 345566666666666666666666655544
Done!