Your job contains 1 sequence.
>042465
MDAFGNPLKQSNDFELHEFIDDQNFDQFIDLIRGENEDPFATFDCRVISGCCDDSSTTPD
SHLFDLSAAESTEVTDHNNFVLNSSTLSSLKIGGDVKEGDHYDEDNDGNDASGAARTTTI
IDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQEL
QTTAKNLKAEIADLEASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERG
FYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAESERFVLTFTLNAKDNDQISMQLP
NLKLWVANALLNQGFQVLITPLSA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042465
(324 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 627 2.7e-61 1
UNIPROTKB|Q7XVB7 - symbol:OSJNBa0072D21.7 "OSJNBa0072D21.... 138 1.5e-20 3
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 194 3.0e-15 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 178 2.1e-13 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 194 3.5e-13 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 178 2.1e-12 2
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 191 2.1e-12 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 188 5.0e-12 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 186 6.9e-12 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 186 8.6e-12 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 183 1.1e-11 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 162 1.9e-10 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 166 3.8e-10 2
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 169 7.5e-10 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 163 1.0e-09 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 165 1.3e-09 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 156 1.4e-09 2
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 167 1.5e-09 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 163 2.2e-09 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 160 3.3e-09 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 162 4.6e-09 1
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 139 5.1e-09 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 161 5.7e-09 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 161 6.6e-09 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 155 7.9e-09 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 152 2.6e-08 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 150 5.1e-08 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 148 6.5e-08 1
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 149 8.9e-08 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 150 1.5e-07 1
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 143 4.8e-07 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 137 6.5e-07 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 136 1.7e-06 1
TAIR|locus:2038510 - symbol:AT1G06170 "AT1G06170" species... 136 2.6e-06 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 136 3.1e-06 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 132 3.7e-06 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 131 5.3e-06 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 109 5.6e-06 2
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 135 5.8e-06 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 132 8.4e-06 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 129 9.4e-06 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 128 1.0e-05 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 123 1.3e-05 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 125 2.3e-05 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 130 2.3e-05 1
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 127 3.1e-05 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 126 3.4e-05 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 127 3.8e-05 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 116 4.0e-05 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 123 4.3e-05 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 126 4.3e-05 2
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 103 5.1e-05 2
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 122 7.3e-05 1
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 121 7.3e-05 1
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 119 9.9e-05 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 122 0.00011 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 114 0.00011 2
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 116 0.00011 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 120 0.00012 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 120 0.00013 1
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 122 0.00016 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 118 0.00016 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 119 0.00016 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 120 0.00020 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 119 0.00021 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 113 0.00034 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 113 0.00039 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 118 0.00043 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 116 0.00051 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 114 0.00056 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 115 0.00062 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 114 0.00062 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 108 0.00089 1
UNIPROTKB|Q6Z339 - symbol:B1121A12.20 "Os02g0726700 prote... 112 0.00092 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 111 0.00098 1
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 159/329 (48%), Positives = 209/329 (63%)
Query: 1 MDAFGNPLKQSNDFELHEXXXXXXXXXXXXLIRGEN----EDPFATFDCRVI--SGCCDD 54
M+ N L ND ELH LIRG++ E+P FD + S C D
Sbjct: 1 MEGRVNALSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFID 60
Query: 55 SST---TPDSHLFDLSAAESTEVTDHNNFVLNSSTLSSLKIGGDVKEGDHYDEDNDGNDA 111
+ TP LFD + V + +F S S++ GG+ E D+ NDG+D+
Sbjct: 61 ENQFIPTPVDDLFDELPDLDSNVAE--SF--RSFDGDSVRAGGEEDEEDY----NDGDDS 112
Query: 112 SGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVG 171
S TTT D + +K K D RSRTLISE++RRG+MK+KLY LR+LVPNITKMDKAS+VG
Sbjct: 113 SA---TTTNNDGT-RKTKTD-RSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVG 167
Query: 172 DAVSYVQELQTTAKNLKAEIADLEASSGSSENWNESIENTKNTQ-IQSNSTNSRKKIIMQ 230
DAV YVQELQ+ AK LK++IA LEAS S+ + E + + TQ + + + KKII Q
Sbjct: 168 DAVLYVQELQSQAKKLKSDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKII-Q 226
Query: 231 MDVFQVEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAES-ERFVLTFTLNA 289
MDV QVEE+GFY++LV NKGEGVA SLY++LESLTSF VQNSNL + S + ++LT+TL+
Sbjct: 227 MDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDG 286
Query: 290 KDNDQISMQLPNLKLWVANALLNQGFQVL 318
+Q S+ LPNLKLW+ +LLNQGF+ +
Sbjct: 287 TCFEQ-SLNLPNLKLWITGSLLNQGFEFI 314
>UNIPROTKB|Q7XVB7 [details] [associations]
symbol:OSJNBa0072D21.7 "OSJNBa0072D21.7 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG236355 EMBL:AL662977 ProteinModelPortal:Q7XVB7
Gramene:Q7XVB7 Uniprot:Q7XVB7
Length = 383
Score = 138 (53.6 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 34/71 (47%), Positives = 45/71 (63%)
Query: 103 DEDNDGNDASGAARTTTIIDA---SSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVP 159
D D DG D + R + D +S K RS+T++SE+KRR +MKEKLY+LRALVP
Sbjct: 100 DGDGDG-DGDVSPRDGELGDGDGDNSATRKRRDRSKTIVSERKRRVRMKEKLYELRALVP 158
Query: 160 NITKMDKASLV 170
NITK+ L+
Sbjct: 159 NITKVRTQCLI 169
Score = 112 (44.5 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 250 GEGVAASLYEALESLTSFNVQNSNLVAESERFVLTFTLNAKD--NDQISMQLPNLKLWVA 307
G GVAA + A+ESL+ F V++S + +R V T TL + D ++ +KLWV
Sbjct: 307 GGGVAAPVCAAVESLSCFTVESSTVGCSPDRVVATLTLKVSEAEEDVSAISECTVKLWVM 366
Query: 308 NALLNQGFQ 316
ALL +GF+
Sbjct: 367 AALLKEGFR 375
Score = 96 (38.9 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 163 KMDKASLVGDAVSYVQELQTTAKNLKAEIADLE 195
+MDKAS++ DAV YV++LQ A+ LK E+A LE
Sbjct: 193 QMDKASIIADAVVYVKDLQAHARKLKEEVAALE 225
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 194 (73.4 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 47/124 (37%), Positives = 76/124 (61%)
Query: 112 SGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVG 171
SG+ +++ D ++ P S+ ++SE+ RR K+ ++L+ LR++VPNI+K+DKAS++
Sbjct: 35 SGSGESSSP-DGAATSPAS---SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIK 90
Query: 172 DAVSYVQELQTTAKNLKAEIADLEASSGSSENWNESIE-NTKNTQIQSNSTNS--RKKII 228
D++ Y+QEL K L+AEI +LE+ S EN + N T +Q S N+ R K
Sbjct: 91 DSIDYMQELIDQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKF 150
Query: 229 MQMD 232
QMD
Sbjct: 151 KQMD 154
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 178 (67.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 44/169 (26%), Positives = 92/169 (54%)
Query: 126 KKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAK 185
K+ + +S L +E++RR K+ +L LR+ VP +T M KAS+V DA++Y+ ELQ K
Sbjct: 23 KEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVK 82
Query: 186 NLKAEIADLEASSGSSENWNESIENTKNTQIQSNSTNSR-KKIIMQMDV--FQVEERGFY 242
NL ++E + + E + +++++ N KK+ ++ +V ++ ER F+
Sbjct: 83 NLLETFHEMEEAPPEIDE--EQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFW 140
Query: 243 LKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAESERFVLTFTLNAKD 291
LK+++ K +G+ E + L F + + +L + +++ ++ ++
Sbjct: 141 LKIITEKRDGIFTKFMEVMRFL-GFEIIDISLTTSNGAILISASVQTQE 188
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 194 (73.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 43/127 (33%), Positives = 73/127 (57%)
Query: 113 GAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGD 172
G ++ S + P+ S+ L++E++RR ++ ++L LR++VP I+KMD+ S++GD
Sbjct: 174 GGGAAASVRPRSCRPPQPGAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGD 233
Query: 173 AVSYVQELQTTAKNLKAEIADLEASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMD 232
+ YV+EL KNL+ E A ++SS S+EN + NT S+S+ +I
Sbjct: 234 TIGYVKELMDRIKNLQVEAATGDSSSSSTENLSMLKLNTLKPP-PSSSSGEETPLIRNST 292
Query: 233 VFQVEER 239
F+VE R
Sbjct: 293 RFEVERR 299
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 178 (67.7 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 38/93 (40%), Positives = 59/93 (63%)
Query: 112 SGAARTTTIIDASSKKPKGDHR---SRTLISEQKRRGKMKEKLYQLRALVPNITKMDKAS 168
SG TT ++ GD ++ ++ E+ RR K+ EKLY LR++VPNITKMDKAS
Sbjct: 69 SGGGMTTMMMGGGGGG--GDDAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKAS 126
Query: 169 LVGDAVSYVQELQTTAKNLKAEIADLEASSGSS 201
++ DA+ Y+Q LQ + + E+A LE+++ +S
Sbjct: 127 IIKDAIEYIQRLQAEEQQMLREVAALESAAAAS 159
Score = 41 (19.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 15/71 (21%), Positives = 31/71 (43%)
Query: 228 IMQMDVFQVEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAESERFVLTFTL 287
I ++ V +V +R + + +K A + ALE L V +N+ + + + T +
Sbjct: 219 IQELRVSEVGDRVLVVSVTCSKRRDAMARVCRALEELR-LRVITANITSVAGCPMHTLFV 277
Query: 288 NAKDNDQISMQ 298
D + M+
Sbjct: 278 EVDHMDSVQMK 288
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 191 (72.3 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 51/146 (34%), Positives = 83/146 (56%)
Query: 103 DEDNDGNDASGAARTTTIIDASS---KKPKGD-HRSRTLISEQKRRGKMKEKLYQLRALV 158
D + +G SG+ + I D KK G +++ L++E++RR K+ ++LY LR+LV
Sbjct: 278 DMNENGRVDSGSDCSDQIDDEDDPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLV 337
Query: 159 PNITKMDKASLVGDAVSYVQELQTTAKNLKAEIAD-LEASSGSSE-NWNESIENTKNTQI 216
P ITK+D+AS++GDA++YV+ELQ AK L+ E+ + E GS+ S+ T T
Sbjct: 338 PRITKLDRASILGDAINYVKELQNEAKELQDELEENSETEDGSNRPQGGMSLNGTVVTGF 397
Query: 217 QSN-STNSRKKIIMQ-MDVFQVEERG 240
S NS + Q +D+ ++G
Sbjct: 398 HPGLSCNSNVPSVKQDVDLENSNDKG 423
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 188 (71.2 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 48/151 (31%), Positives = 86/151 (56%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEASS 198
+E++RR K+ ++ Y LRA+VPN++KMDKASL+GDA+SY+ EL++ K KAE +D E
Sbjct: 420 AERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKS--KLQKAE-SDKEELQ 476
Query: 199 GSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGF--YLKLVSNKGEGVAAS 256
+ N+ N K++ N ++++M+V V+ G+ +++ +K A
Sbjct: 477 KQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEV-DVKIIGWDAMIRIQCSKRNHPGAK 535
Query: 257 LYEALESLTSFNVQNSNLVAESERFVLTFTL 287
EAL+ L V +++L ++ + T+
Sbjct: 536 FMEALKEL-DLEVNHASLSVVNDLMIQQATV 565
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 186 (70.5 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 49/129 (37%), Positives = 76/129 (58%)
Query: 76 DHNNFVLNSSTLSSLKIGGDVKEGDHYD-EDNDGNDASGA-----ARTTTIIDASSKKPK 129
D + VL+ L I D G +YD ED G + SGA A +T D KK K
Sbjct: 275 DGADMVLDDGDDDGLSI--DASGGLNYDSEDARGGEDSGAKKESNANSTVTGDGKGKK-K 331
Query: 130 GDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKA 189
G ++ L++E++RR K+ ++LY LR++VP I+KMD+AS++GDA+ Y++EL +L+
Sbjct: 332 G-MPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQN 390
Query: 190 EIADLEASS 198
E+ A+S
Sbjct: 391 ELESSPATS 399
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 186 (70.5 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 55/213 (25%), Positives = 112/213 (52%)
Query: 103 DEDNDGNDASGAARTTTIIDASSKKPK------GDHRSRTLI---SEQKRRGKMKEKLYQ 153
D D+ +AS + +++ KKP+ + R L +E++RR K+ ++ Y
Sbjct: 375 DSDHSDLEAS-VVKEAIVVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYS 433
Query: 154 LRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEAS-SGSSENWN--ESIEN 210
LRA+VPN++KMDKASL+GDA+SY+ EL++ + +++ +++ G S+ N + +
Sbjct: 434 LRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGS 493
Query: 211 TKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQ 270
+ SN ++ I M++DV ++ +++ K + A EAL+ L V
Sbjct: 494 RAKERKSSNQDSTASSIEMEIDV-KIIGWDVMIRVQCGKKDHPGARFMEALKEL-DLEVN 551
Query: 271 NSNLVAESERFV--LTFTLNAK--DNDQISMQL 299
+++L ++ + T + ++ ++DQ+ + L
Sbjct: 552 HASLSVVNDLMIQQATVKMGSQFFNHDQLKVAL 584
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 183 (69.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 52/174 (29%), Positives = 93/174 (53%)
Query: 124 SSKK--PKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQ 181
++KK P + +S+ L SE+KRR ++ + +Y LRA+VP ITK++K + DAV Y+ EL
Sbjct: 251 ANKKLLPTENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELL 310
Query: 182 TTAKNLKAE---IADLEASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEE 238
+ L+ E I ++E ++E +I + + ++ S S KK ++++V + E
Sbjct: 311 VEKQKLEDELKGINEMECKEIAAEE-QSAIADPEAERVSSKSNKRVKKNEVKIEVHETGE 369
Query: 239 RGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAESERFVLTFTLNAKDN 292
R F +++V + L EA++ L + + N + V+T LN K N
Sbjct: 370 RDFLIRVVQEHKQDGFKRLIEAVD-LCELEIIDVNFT-RLDLTVMT-VLNVKAN 420
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 162 (62.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 63/236 (26%), Positives = 113/236 (47%)
Query: 73 EVTDHNNFVLNSSTLSSLKIGGDVKEGDHYDEDNDGNDASGAARTTTIIDASSKKPKGDH 132
EV ++FV S L+ GG ++GD +E+ A+ AA K +
Sbjct: 17 EVKVEDDFV--DSVLNFGGGGGGEEDGDDGEEEQQQQQAAAAAM--------GK----EF 62
Query: 133 RSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIA 192
+S+ L +E++RRG++ ++ LRA+VP ITKM K + + DA+ +++ LQ L+ ++
Sbjct: 63 KSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEVLELQRQLG 122
Query: 193 DL--EA-SSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNK 249
D EA S + +ES T+N Q Q+++ + + LK+ K
Sbjct: 123 DSPGEAWEKQGSASCSESFVPTENAHYQG-----------QVELISLGSSKYNLKIFWTK 171
Query: 250 GEGVAASLYEALESLTSFNVQ--NSNLVAESERFVLTFTLNAK-DNDQISMQLPNL 302
G+ + LE+L S+ VQ + N ++ FT+ K + D + ++L +L
Sbjct: 172 RAGLFTKV---LEALCSYKVQVLSLNTISFYGYAESFFTIEVKGEQDVVMVELRSL 224
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 166 (63.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 49/182 (26%), Positives = 98/182 (53%)
Query: 99 GDHYDEDNDGNDASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALV 158
G +Y+ D + N++ AA + I K KG ++ L++E++RR K+ ++LY LR++V
Sbjct: 273 GLNYESD-EINESGKAAESVQIGGGGKGKKKG-MPAKNLMAERRRRKKLNDRLYMLRSVV 330
Query: 159 PNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEASS--GSSENWN------ESIEN 210
P I+KMD+AS++GDA+ Y++EL +L E+ S +S +++ +++
Sbjct: 331 PKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSC 390
Query: 211 TKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQ 270
++ +S S K +++V E R + + + G+ + +AL++L +VQ
Sbjct: 391 RVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNL-GLDVQ 449
Query: 271 NS 272
+
Sbjct: 450 QA 451
Score = 44 (20.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 39 PFATFDCRVISGCCDDSSTTPDSHLFDLSAAESTEVTDHNN 79
PF D ++ D SS+ S F L ++ + NN
Sbjct: 74 PFNPNDNLLLQHSIDSSSSCSPSQAFSLDPSQQNQFLSTNN 114
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 169 (64.5 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 36/94 (38%), Positives = 61/94 (64%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEASS 198
+E++RR K+ ++ Y LR++VPNI+KMDKASL+GDA+SY++ELQ K ++ E + S
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSL 458
Query: 199 GSSENWNESIENTKNTQIQSNSTNSRKKIIMQMD 232
SE+ ++E + IQ+ + ++I +D
Sbjct: 459 --SESNTITVEESPEVDIQAMNEEVVVRVISPLD 490
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 163 (62.4 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 47/164 (28%), Positives = 91/164 (55%)
Query: 124 SSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTT 183
S+KK +G S+ L++E++RR ++ ++L LR++VP ITKMD+ S++GDA+ Y++EL
Sbjct: 141 SNKKLEGQP-SKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDK 199
Query: 184 AKNLKAEIADLEASSG-SSENWNES-IENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGF 241
L+ + +L ++S S+ NES + N+ ++ N+ +D+ + G
Sbjct: 200 INKLQEDEQELGSNSHLSTLITNESMVRNSLKFEVDQREVNTH------IDICCPTKPGL 253
Query: 242 YLKLVSNKGEGVAASLYEALESLTS-FNVQNSNLVAESERFVLT 284
+ VS E + + + + S S F++Q S +R+++T
Sbjct: 254 VVSTVSTL-ETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVT 296
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 59/228 (25%), Positives = 106/228 (46%)
Query: 63 LFDLSAAESTEVTDHNNFVLN-SSTLSSLKIGGDVKEGDHY------DEDNDGNDASGAA 115
+ +L ++ES + + NF+ S S K + Y D GN G+
Sbjct: 166 IIELGSSES--IIQNRNFINRVKSIFGSGKTTKHTNQTGSYPKPAVSDHSKSGNQQFGSE 223
Query: 116 RT------TTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASL 169
R TT + A++K+ + +E++RR K+ + Y LRA+VP +++MDKASL
Sbjct: 224 RKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASL 283
Query: 170 VGDAVSYVQELQTTAKNLKAEIADLEASSGSSENWNESIENTKNT----QIQSNSTNSRK 225
+ DAVSY++ L++ +L+ EI ++ + ++ + S NT + Q+ + S +
Sbjct: 284 LSDAVSYIESLKSKIDDLETEIKKMKMTE--TDKLDNSSSNTSPSSVEYQVNQKPSKSNR 341
Query: 226 KIIMQMDVFQVEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSN 273
+++ V V E N +A L AL + VQ++N
Sbjct: 342 GSDLEVQVKIVGEEAIIRVQTENVNHPTSA-LMSALMEMDC-RVQHAN 387
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 156 (60.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 30/78 (38%), Positives = 55/78 (70%)
Query: 134 SRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIAD 193
S+ + E+ RR ++ EKL+ LRA+VP ITKMDKAS+V DA++++++LQ + L EI+
Sbjct: 96 SKNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEISV 155
Query: 194 LEASSGSSENWNESIENT 211
L++++ + E ++++
Sbjct: 156 LQSAAAVAATAVEDVDDS 173
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 230 QMDVFQVEERGFYLKLVSNKGEGVAASLYEALESL 264
Q+ V +V E+ + + K G A + A+ESL
Sbjct: 233 QLQVSKVGEKTVAVSIRCAKTRGAMAKVCHAVESL 267
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 63/236 (26%), Positives = 109/236 (46%)
Query: 55 SSTTPDSHLFDLSAAESTEVTDHNNFVLNSSTLSSLKIGGDVKEGDHYDEDNDGNDASGA 114
SS PD + S E + VLN + S GD G+ D + +
Sbjct: 376 SSGNPDPSSY--SGQTQFENKRKRSMVLNEDKVLSF---GDKTAGESDHSDLEASVVKEV 430
Query: 115 ARTTTIIDASSKKPKGDHRSRTLI-SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDA 173
A K G + +E++RR K+ ++ Y LRA+VPN++KMDKASL+GDA
Sbjct: 431 AVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDA 490
Query: 174 VSYVQELQTTAKNLKAEIADLEASSGSSENWNESIENTKNTQ--IQSNSTNSRKKIIMQM 231
++Y+ EL++ K +K E L+ + E E + S+S +S K + M++
Sbjct: 491 IAYINELKS--KVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEI 548
Query: 232 DVFQVEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAESERFVLTFTL 287
+V ++ +++ S+K AA L AL L V ++++ ++ + T+
Sbjct: 549 EV-KIIGWDAMIRVESSKRNHPAARLMSALMDL-ELEVNHASMSVVNDLMIQQATV 602
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 44/134 (32%), Positives = 73/134 (54%)
Query: 134 SRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIAD 193
S+ L++E++RR ++ ++L LR++VP I+KMD+ S++GD + YV+EL K L+ EI
Sbjct: 181 SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEI-- 238
Query: 194 LEASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGF---YLKLVSNKG 250
G + E ++ NT S+S N+ + ++ F VE RG +++
Sbjct: 239 -----GVTP---EELD-LLNTMKDSSSGNNNEMLVRNSTKFDVENRGSGNTRIEICCPAN 289
Query: 251 EGVAASLYEALESL 264
GV S ALE L
Sbjct: 290 PGVLLSTVSALEVL 303
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 160 (61.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 45/191 (23%), Positives = 89/191 (46%)
Query: 110 DASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASL 169
DA AA A++ +P ++ +++E+KRR K+ ++ L +VP + KMDKAS+
Sbjct: 157 DAMVAADVAKAPAAAASRPASQNQEH-ILAERKRREKLSQRFIALSKIVPGLKKMDKASV 215
Query: 170 VGDAVSYVQELQTTAKNLKAEIADLEASSGSSENWNE-SIENTKNTQIQSNSTNSRKKII 228
+GDA+ YV++LQ K L+ E + ++ S ++ + N
Sbjct: 216 LGDAIKYVKQLQDQVKGLEEEARRRPVEAAVLVKKSQLSADDDDGSSCDENFDGGEATAG 275
Query: 229 MQMDVFQVEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVA-ESERFVLTFTL 287
+ +V ER +K+ +G + +E++ + N+N++ S +T
Sbjct: 276 LPEIEARVSERTVLVKIHCENRKGALITALSEVETI-GLTIMNTNVLPFTSSSLDITIMA 334
Query: 288 NAKDNDQISMQ 298
A +N +S++
Sbjct: 335 TAGENFSLSVK 345
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 162 (62.1 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 41/101 (40%), Positives = 57/101 (56%)
Query: 93 GGDVKEGDHYDEDNDGNDASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLY 152
G + GD D D DG SG A+ + + L +E+KRR K+ LY
Sbjct: 258 GRKLHGGDPED-DGDGEGRSGGAKR--------------QQCKNLEAERKRRKKLNGHLY 302
Query: 153 QLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIAD 193
+LR+LVPNITKMD+AS++GDA+ Y+ LQ K L+ E+ D
Sbjct: 303 KLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDELED 343
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 139 (54.0 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 31/90 (34%), Positives = 53/90 (58%)
Query: 125 SKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTA 184
+++ KG +SRT ++E++RR ++ + L+ L+PN TK +AS+V D + Y+ ELQ
Sbjct: 13 AEEGKGSKKSRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLV 72
Query: 185 KNLKAEIADLEASSGSSENWNESIENTKNT 214
LK + + G+ N N ++N KNT
Sbjct: 73 SELKYLVE--KKKCGARHN-NIEVDN-KNT 98
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 161 (61.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 58/201 (28%), Positives = 95/201 (47%)
Query: 79 NFVLNSSTLSS------LKIGGDVKEGDHYDEDNDGNDA--SGAARTTTIIDASSKKPKG 130
NF +SSTL+ L G +VK+ N +D + T +++ K +G
Sbjct: 272 NFSTSSSTLARAPCGDVLSFGENVKQSFENRNPNTYSDQIQNVVPHATVMLEKKKGKKRG 331
Query: 131 D---H-RSRTLI---SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTT 183
H R + L +E+ RR K+ + Y LRA+VPN++KMDK SL+ DAV Y+ EL++
Sbjct: 332 RKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSK 391
Query: 184 AKNLKAEIADLEASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYL 243
A+N++ E +E N + I +N + +M+++V +E +
Sbjct: 392 AENVELEKHAIEIQF----NELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMV 447
Query: 244 KLVSNKGEGVAASLYEALESL 264
++ S K A L AL L
Sbjct: 448 RVESRKDHHPGARLMNALMDL 468
Score = 39 (18.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 65 DLSAAESTEVTDHNNFVLNSSTLS 88
D+S + EVTD F L S T S
Sbjct: 125 DVSDDDDVEVTDMEWFFLVSMTWS 148
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 161 (61.7 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 37/86 (43%), Positives = 53/86 (61%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEASS 198
+E++RR K+ ++ Y LR++VPNI+KMDKASL+GDAVSY+ EL K ++AE L
Sbjct: 437 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL---- 492
Query: 199 GSSENWNESIENTKNTQIQSNSTNSR 224
G S N S+++ N Q R
Sbjct: 493 GYSSNPPISLDSDINVQTSGEDVTVR 518
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 155 (59.6 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 43/171 (25%), Positives = 90/171 (52%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEA 196
+++E+KRR K+ ++ L AL+P + KMDKAS++GDA+ +++ LQ + K + + +
Sbjct: 128 ILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTM 187
Query: 197 SSGSSENWNESIENTKNTQIQSNST-----NSRKKIIMQMDVFQVEERGFYLKLVSNKGE 251
S S+ +N Q S+S+ NS + +++V +V + +K++ K +
Sbjct: 188 ESVVLVK-KSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEV-RVSGKDVLIKILCEKQK 245
Query: 252 GVAASLYEALESLTSFNVQNSNLVAESERFVLTFTLNAKDNDQISMQLPNL 302
G + +E L ++ NSN++ F ++ A+ N+ M++ ++
Sbjct: 246 GNVIKIMGEIEKL-GLSITNSNVLPFGPTFDISII--AQKNNNFDMKIEDV 293
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 152 (58.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 49/165 (29%), Positives = 89/165 (53%)
Query: 125 SKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTA 184
SKK +G S+ L++E++RR ++ ++L LR++VP I+KMD+ S++GDA+ Y++EL
Sbjct: 169 SKKLEGQP-SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKI 227
Query: 185 KNLKAEIADLEASSGS--SENWNESIENTKNTQIQSNSTN---SRKKIIMQMDVFQVEER 239
L+ E +L S+ S S+ + + + N + NS R+ ++D+ +
Sbjct: 228 NKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSPKP 287
Query: 240 GFYLKLVSNKGEGVAASLYEALESLTS-FNVQNS-NLVAESERFV 282
G L V N E + + + + S S F++Q S + AE F+
Sbjct: 288 GLLLSTV-NTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFI 331
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 150 (57.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 38/117 (32%), Positives = 66/117 (56%)
Query: 76 DHNNFVLNSS--TLSSLKIGGDVKEGDHYD-EDNDGNDASGAARTTTIIDASSKKPKGDH 132
++NN NSS +SS +G E D YD E +G +A ++ SS+
Sbjct: 137 NNNNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSKSGPSSRSSSKRC 196
Query: 133 RSRTL--ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNL 187
R+ + +SE++RR ++ EK+ L++L+PN K DKAS++ +A+ Y+++LQ + L
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 148 (57.2 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 45/177 (25%), Positives = 88/177 (49%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEA 196
+I+E+KRR K+ ++ L ALVP + KMDKAS++GDA+ +++ LQ L+ + +
Sbjct: 154 IIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRL 213
Query: 197 SSGSSENWNESIENTKNTQIQSNSTNSRKKI-IMQMDVFQVEERGFYLKLVSNKGEGVAA 255
S ++ I + N S+ + + + +++V + + +K++ K +G A
Sbjct: 214 ESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEV-RFSDEDVLIKILCEKQKGHLA 272
Query: 256 SLYEALESLTSFNVQNSNLVAESERFVLTFTLNAKDNDQISMQLPNLKLWVANALLN 312
+ +E L + NS+++ L T+ AK M L ++ + +AL N
Sbjct: 273 KIMAEIEKLHIL-ITNSSVLNFGP--TLDITIIAKKESDFDMTLMDVVKSLRSALSN 326
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 149 (57.5 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 37/142 (26%), Positives = 73/142 (51%)
Query: 81 VLNSSTLSSLKIGGDVKEGDHYDEDNDGNDASGAARTTTIIDASS---KKPKGDHRSRTL 137
++ S+ S +G D DE N G++ + A + II+ S +K +G +++
Sbjct: 157 LIPSNDYSGYLLGIDTNTTTQRDESNVGDENNNAQFDSGIIEFSKEIRRKGRGKRKNKPF 216
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEAS 197
+E++RR + E+ L+ L+P+ +K D+AS++ D + Y+ EL+ LK + + +
Sbjct: 217 TTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKY-LVERKRC 275
Query: 198 SGSSENWNESIENTKNTQIQSN 219
G +N NE +N N + +
Sbjct: 276 GGRHKN-NEVDDNNNNKNLDDH 296
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 41/126 (32%), Positives = 67/126 (53%)
Query: 85 STLSSLKIGGDVK-EGDHYDEDNDGNDASGAARTTTIIDASSKKPK------GDHRSRTL 137
+T S G K E DH D + + ++R + K+P+ + R L
Sbjct: 465 TTRPSTGTGAPAKSESDHSDLEASVREVE-SSRVVAPPPEAEKRPRKRGRKPANGREEPL 523
Query: 138 I---SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADL 194
+E++RR K+ ++ Y LRA+VPN++KMDKASL+GDA+SY+ EL+ L+ + L
Sbjct: 524 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALETDKETL 583
Query: 195 EASSGS 200
++ S
Sbjct: 584 QSQMES 589
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 143 (55.4 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/87 (32%), Positives = 51/87 (58%)
Query: 102 YDEDNDGNDASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNI 161
Y E + N+ + ++K +G +SRT +E++RR ++ + L+ L+PN
Sbjct: 214 YFEGANNNNGGFENEILEFNNGVTRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNP 273
Query: 162 TKMDKASLVGDAVSYVQELQTTAKNLK 188
TK+D+AS+VG+A+ Y++EL T + K
Sbjct: 274 TKIDRASIVGEAIDYIKELLRTIEEFK 300
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 137 (53.3 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEI--ADLEA 196
+E++RR K+ + +LRA VP +++MDKASL+ DAV Y+ EL+ + L+AE A L
Sbjct: 98 AERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEAEARRAPLAP 157
Query: 197 SSGSSENW 204
S+ ++ W
Sbjct: 158 SAAAAAAW 165
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 136 (52.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAE 190
+I+E++RR K+ ++ +L ++P + KMDKA+++GDAV YV+ELQ K L+ E
Sbjct: 169 IIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEE 222
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 52/192 (27%), Positives = 88/192 (45%)
Query: 77 HNNFVLNSSTLSSLKIGGDVKEGDH-----YDEDNDGNDASGAARTTTIIDASSKKPKGD 131
H NF L S + + D E + YDE+N+ D D ++K +G
Sbjct: 164 HLNFPLQPPNGSFMGVDQDQTETNQGVNLMYDEENNNLD-----------DGLNRKGRGS 212
Query: 132 HRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEI 191
+ + +E++RR K++ L+ L+PN TK D+AS+VG+A+ Y++EL T K +
Sbjct: 213 KKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEFKLLV 272
Query: 192 A-------DLEASSGSSENW---NESIE----NTKNTQIQSNSTNSRKKIIMQMDVFQVE 237
+ E EN+ +E +E N KN ++ S RK +DV ++
Sbjct: 273 EKKRVKQRNREGDDVVDENFKAQSEVVEQCLINKKNNALRC-SWLKRKSKFTDVDVRIID 331
Query: 238 ERGFYLKLVSNK 249
+ +K+V K
Sbjct: 332 DE-VTIKIVQKK 342
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAE 190
+E++RR K+ ++ Y LRA+VPNI+KMDKASL+ DA++Y+ ++Q + + E
Sbjct: 324 AERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETE 375
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 132 (51.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 39/170 (22%), Positives = 84/170 (49%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLK----AEIA 192
+++E+KRR K+ ++ +L A++P + KMDKA+++ DA SY++ELQ K L+ A +
Sbjct: 132 VVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQAAARVT 191
Query: 193 DLEASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKGEG 252
+ ++ S + +++ + TN+ ++M +++ GEG
Sbjct: 192 EAAMATPSPARAMNHLPVPPEIEVRCSPTNN---VVM-------------VRIHCENGEG 235
Query: 253 VAASLYEALESLTSFNVQNSNLVA---ESERFVLTFTLNAKDN-DQISMQ 298
V + +E + + N+N++ + ++T AK N ++ +Q
Sbjct: 236 VIVRILAEVEEI-HLRIINANVMPFLDQGATMIITIAAKAKINRSEVKVQ 284
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 131 (51.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 109 NDASGAARTTTIIDASSKKPKGDHRSRTL----ISEQKRRGKMKEKLYQLRALVPNITKM 164
++A G++ A + G RSR +SE++RR K+ EK+ L++L+PN K
Sbjct: 77 SEAGGSSEPEAAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT 136
Query: 165 DKASLVGDAVSYVQELQTTAKNL 187
DKAS++ +A+ Y+++LQ + L
Sbjct: 137 DKASMLDEAIEYLKQLQLQVQML 159
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 109 (43.4 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 103 DEDNDGNDASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVP--N 160
+ED + D G A K G + + E+ RR +M E L LR+L+P
Sbjct: 78 EEDEEEEDGDGEAE-------EDNKQDGQQKMSHVTVERNRRKQMNEHLTVLRSLMPCFY 130
Query: 161 ITKMDKASLVGDAVSYVQELQTTAKNLKAE 190
+ + D+AS++G V Y+ ELQ ++L+A+
Sbjct: 131 VKRGDQASIIGGVVEYISELQQVLQSLEAK 160
Score = 64 (27.6 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 196 ASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKGEGVAA 255
ASS SS + + + E++ ++ +NS K + ++V + LK VS+K G
Sbjct: 257 ASSSSSPSVSSNHESSVINELVANS----KSALADVEV-KFSGANVLLKTVSHKIPGQVM 311
Query: 256 SLYEALESLTSFNVQNSNLVAESERFVLTFTLNAKDNDQISMQ 298
+ ALE L + + N+ E + +FT+ Q+S +
Sbjct: 312 KIIAALEDL-ALEILQVNINTVDETMLNSFTIKIGIECQLSAE 353
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 135 (52.6 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 30/91 (32%), Positives = 54/91 (59%)
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKA--EIADLE 195
+SE+KRR K+ E+ LR+++P+I+K+DK S++ D + Y+Q+LQ + L++ E AD E
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 196 ASSGSSENWNESIENTKNTQIQSNSTNSRKK 226
+ E + + +N NS++K
Sbjct: 468 TRITMMKRKKPDDEEERAS---ANCMNSKRK 495
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 132 (51.5 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 30/81 (37%), Positives = 54/81 (66%)
Query: 109 NDASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKAS 168
N+A G+A T T SS K +H ++SE++RR K+KE L+++VP+I K+DKAS
Sbjct: 225 NNADGSAATMTTDQGSSIK---NH----VMSERRRREKLKEMFLILKSVVPSIHKVDKAS 277
Query: 169 LVGDAVSYVQELQTTAKNLKA 189
++ + ++Y++EL+ + L++
Sbjct: 278 ILAETIAYLKELEKRVEELES 298
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 129 (50.5 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 47/194 (24%), Positives = 92/194 (47%)
Query: 113 GAARTTTIIDASSKKPKGDHRSRT-LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVG 171
G+ R + + ++P H + +++E+KRR K+ E+L L AL+P + K DKA+++
Sbjct: 112 GSKRKDCVNNGGRREP---HLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLE 168
Query: 172 DAVSYVQELQTTAKNLKAE----------IADLEASSGSSENWNESIENTKNTQIQSNST 221
DA+ ++++LQ K L+ E I ++ S ++ + S +T + +S+
Sbjct: 169 DAIKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSS 228
Query: 222 NSRKKIIMQ-MDVFQ--VEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAES 278
+ I Q M + + V +R +++ K +G + +LE V + L +
Sbjct: 229 SDEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGN 288
Query: 279 ERFVLTFTLNAKDN 292
V+T L DN
Sbjct: 289 STLVITI-LTKMDN 301
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 59/275 (21%), Positives = 124/275 (45%)
Query: 53 DDSSTTPDSHLFDLSAAESTEVTDHN-NF-VLNSSTLSSLKIGGDVKEGDHYDE-DNDGN 109
++++ +PD L + A+ + DH +F L +++K + D N
Sbjct: 23 EENNLSPDESLSNSRRADQSSKFDHQMHFECLREKPKAAVKPMMKINNKQQLISFDFSSN 82
Query: 110 DASGAARTTTIIDA----SSKKPKGDHRSRT-------LISEQKRRGKMKEKLYQLRALV 158
S A I+D +K+ H +R+ +++E+KRR K+ EK L AL+
Sbjct: 83 VISSPAAEEIIMDKLVGRGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALL 142
Query: 159 PNITKMDKASLVGDAVSYVQELQTTAKNLKAEI-ADLEASSGSSENWNESIENTKNTQIQ 217
P + K DK +++ DA+S +++LQ + LK E A + S ++ + +
Sbjct: 143 PGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQMESMILVKKSKVFFDEEPNLSC 202
Query: 218 SNSTNSR-KKIIMQMDVFQVEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVA 276
S S + + + +++ ++ + ++++ K +G ++ +E+ ++NS ++
Sbjct: 203 SPSVHIEFDQALPEIEA-KISQNDILIRILCEKSKGCMINILNTIENF-QLRIENSIVLP 260
Query: 277 ESERFVLTFTLNAKDNDQISMQLPNLKLWVANALL 311
+ L T+ A+ + SM + LK V N L
Sbjct: 261 FGDS-TLDITVLAQMDKDFSMSI--LKDLVRNLRL 292
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 123 (48.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 41/132 (31%), Positives = 66/132 (50%)
Query: 56 STTPDSHLFDLSAAESTEVTDHNNFVLNSSTLSSLKIGGDVKEGDHYDEDNDGNDASGAA 115
S TP + S +ST V+ F + S + +G V E D+ + SGA
Sbjct: 28 SRTPTAQ--PSSPPKSTNVSSAETFFPSVSGGAVSSVGYGVSETGQ-DKYAFEHKRSGAK 84
Query: 116 RTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVS 175
+ ++ K D + L SE+KRR K+ EK+ L+ L+PN K DKAS++ +A+
Sbjct: 85 QRNSL------KRNIDAQFHNL-SEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIE 137
Query: 176 YVQELQTTAKNL 187
Y+++LQ + L
Sbjct: 138 YLKQLQLQVQTL 149
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/65 (40%), Positives = 45/65 (69%)
Query: 127 KPKGDHRSRTL----ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQT 182
+P+G RSR +SE++RR ++ EK+ L++L+PN +K DKAS++ DA+ Y+++LQ
Sbjct: 25 RPRGK-RSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQL 83
Query: 183 TAKNL 187
+ L
Sbjct: 84 QVQML 88
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/117 (28%), Positives = 60/117 (51%)
Query: 131 DHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKA- 189
D + E+KRR K+ E+ LR ++P+I K+DK S++ D + Y+QEL+ + L++
Sbjct: 437 DETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESC 496
Query: 190 -EIADLEASSGSSENWNESIENTKNTQIQ--SNSTNSRKKIIMQMDVFQVE--ERGF 241
E D E + + + + T +N T + KK+ + +V + E + GF
Sbjct: 497 RESTDTETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVN-NVGEAEPADTGF 552
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 129 KGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLK 188
KG ++ +E++RR ++ K LR L PN TK D+AS+VGDA+ Y+ EL T K LK
Sbjct: 260 KGKGKAN-FATERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELK 318
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 31/91 (34%), Positives = 53/91 (58%)
Query: 94 GDVKEGDHYDEDNDGNDASGAARTTTIIDASSKKPKGDHRSRTLIS---EQKRRGKMKEK 150
GD++E + N+ +D S A+T + A ++KP + T + E+KRR + +K
Sbjct: 191 GDIEEEESTYLSNNSDDESDDAKTQ--VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKK 248
Query: 151 LYQLRALVPNITKMDKASLVGDAVSYVQELQ 181
+ L+ L+PN K DKASL+ +A+ Y++ LQ
Sbjct: 249 MRALQDLLPNCYKDDKASLLDEAIKYMRTLQ 279
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 95 DVKEGDHYDEDNDGNDASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQL 154
D D +E DG +G +RT SK+ + +SE++RR ++ EK+ L
Sbjct: 313 DCHSEDVEEESGDGRKEAGPSRT----GLGSKRSRSAEVHN--LSERRRRDRINEKMRAL 366
Query: 155 RALVPNITKMDKASLVGDAVSYVQELQ 181
+ L+PN K+DKAS++ +A+ Y++ LQ
Sbjct: 367 QELIPNCNKVDKASMLDEAIEYLKSLQ 393
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 116 (45.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 125 SKKPKGDHRSRTL----ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQEL 180
+++P RSR+ SE++RR ++ EKL L+ L+PN TK DK S++ +A+ Y++ L
Sbjct: 3 ARRPTPTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSL 62
Query: 181 Q 181
Q
Sbjct: 63 Q 63
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 123 (48.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 42/129 (32%), Positives = 66/129 (51%)
Query: 94 GDVKEGDHYDEDNDGNDASGAARTTTIIDASSKK-PKGDH-RSRTLISEQKRRGKMKEKL 151
G+ +E D+ +ED + ++ TT + SK+ K RS+ ++EQ+RR K+ E+
Sbjct: 6 GNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERF 65
Query: 152 YQLRALVPNIT-KMDKASLVGDAVSYVQELQTTAKNLKAEIADLEASSGSSENWNESIEN 210
LR L+PN K D AS + + + YVQ LQ + K E GS W++ E
Sbjct: 66 QILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ--KYE--------GSYPGWSQ--EP 113
Query: 211 TKNTQIQSN 219
TK T ++N
Sbjct: 114 TKLTPWRNN 122
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 126 (49.4 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLK 188
+++E++RR K+ EK LR++VP +TKMDK S++GD ++YV L+ L+
Sbjct: 365 VVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
Score = 41 (19.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 11/57 (19%), Positives = 26/57 (45%)
Query: 208 IENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKGEGVAASLYEALESL 264
+ENT + Q + ++K +++V + E L++ +G+ + + L L
Sbjct: 415 LENTHHEQQHKRTRTCKRKTSEEVEV-SIIENDVLLEMRCEYRDGLLLDILQVLHEL 470
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 103 (41.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 36/120 (30%), Positives = 59/120 (49%)
Query: 85 STLSSLKIGGDVKEGDHYDEDNDGNDASG--AARTTTIIDASSKKPK------GDHRSRT 136
+T ++ G +EG DE+ G G A + +SS P GD
Sbjct: 73 TTTTTTAANGRRREGR--DEEKGGGGGGGPPAQKKQKGSSSSSSSPAALAAAVGDGDGAA 130
Query: 137 LIS----EQKRRGKMKEKLYQLRALVP--NITKMDKASLVGDAVSYVQELQTTAKNLKAE 190
+S E+ RR +M E L LR+L+P + + D+AS++G V Y++ELQ ++L+A+
Sbjct: 131 KMSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAK 190
Score = 63 (27.2 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 232 DVFQVEERG--FYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAESERFVLTFTL 287
DV +VE G LK VS++ G A + ALESL S + + ++ + VL+FT+
Sbjct: 338 DV-RVEFAGPNLVLKTVSHRAPGQALKIIAALESL-SLEILHVSICTVDDATVLSFTI 393
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 122 (48.0 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 68 AAESTEVT-DHNNFVLNSSTLSSLKIGGDVKEGDHYDEDNDGNDASGAARTTTIIDASSK 126
A S E+ N L SST S L K ++ + R T + +
Sbjct: 113 AVSSQEIPFSQANMTLPSSTSSPLSAHSRRKRKINHLLPQEMTREKRKRRKTK--PSKNN 170
Query: 127 KPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPN--ITKMDKASLVGDAVSYVQELQTTA 184
+ + R + E+ RR +M E + LRAL+P I + D+AS+VG A++YV+ L+
Sbjct: 171 EEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQII 230
Query: 185 KNLKAEIADLEASSGSSENWNESIENTKN--TQIQSN---STNSRKKIIMQMDVFQVEER 239
++L+++ + S+ +E +EN N + I SN +T + I +++ ++
Sbjct: 231 QSLESQKRTQQQSN------SEVVENALNHLSGISSNDLWTTLEDQTCIPKIEATVIQNH 284
Query: 240 GFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAESERFVLTFTLNAKDNDQISMQ 298
LK+ K +G +LE L V + N+ S V +++ N K D+ ++
Sbjct: 285 -VSLKVQCEKKQGQLLKGIISLEKL-KLTVLHLNITTSSHSSV-SYSFNLKMEDECDLE 340
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 121 (47.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 65/245 (26%), Positives = 115/245 (46%)
Query: 75 TDHNNFV---LNSSTLSS---LKIGGDVKE--GDHYDEDNDGNDASGAA-----RTTTII 121
T+ N F+ L TL S L + ++K G D + D +GA R
Sbjct: 42 TEPNQFLQSLLQIQTLESKSCLTLETNIKRDPGQTDDPEKDPRTENGAVTVKEKRKRKRT 101
Query: 122 DASSKKPKGDHRSRTLIS-EQKRRGKMKEKLYQLRALVPN--ITKMDKASLVGDAVSYVQ 178
A K + +++ T I+ E+ RR +M E L LR+L+P + + D+AS+VG A+ +++
Sbjct: 102 RAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIK 161
Query: 179 ELQTTAKNLKAEI---ADLEASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQM---D 232
EL+ ++L+AE E +S + + S+ T N+ I S ST S + D
Sbjct: 162 ELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACT-NSSISSVSTTSENGFTARFGGGD 220
Query: 233 VFQVE----ERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNL-VAESERFVL-TFT 286
+VE + LK+ +G+ + +A+ S+ + +L ++ S FV+ +F
Sbjct: 221 TTEVEATVIQNHVSLKVRCKRGK---RQILKAIVSIEELKLAILHLTISSSFDFVIYSFN 277
Query: 287 LNAKD 291
L +D
Sbjct: 278 LKMED 282
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 119 (46.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 127 KPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKN 186
+P G S + +E++RR K+ + LRA VP +++MDKASL+ DA +Y+ EL+
Sbjct: 104 RPDGPTVSH-VEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARVAR 162
Query: 187 LKAEIADLEAS 197
L+++ A+
Sbjct: 163 LESDARQAAAA 173
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 54 DSSTTPDSHLFDLSAAESTEVTDHNNFVLNSSTLSSLKIGGDVKEGDHYDEDNDGNDASG 113
D S + L D S+ S+ + N N T+S + D K D D + S
Sbjct: 175 DRSKNVEERL-DTSSGGSSGCSYGRN---NKETVSGTSVTIDRKRKHVMDADQESVSQSD 230
Query: 114 AARTTT----IIDASSKKPKGDHRSRTL----ISEQKRRGKMKEKLYQLRALVPNITKMD 165
T+T + + SS++ RSR +SE++RR ++ E++ L+ L+P+ ++ D
Sbjct: 231 IGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTD 290
Query: 166 KASLVGDAVSYVQELQ 181
KAS++ +A+ Y++ LQ
Sbjct: 291 KASILDEAIDYLKSLQ 306
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 114 (45.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/106 (32%), Positives = 58/106 (54%)
Query: 97 KEGDHYDEDNDGNDASGAAR----------TTTIIDASSKKPKGDHRSRTLISEQKRRGK 146
+E + D D DG+D G+ + +TT + A++ PK H + E+ RR +
Sbjct: 95 REEEVADRDGDGDDDDGSPQKRRKCCSPESSTTDV-AAATTPKTAH----IAVERNRRKQ 149
Query: 147 MKEKLYQLRALVP--NITKMDKASLVGDAVSYVQELQTTAKNLKAE 190
M E L LR+L+P + + D+AS++G V Y++ELQ +L+A+
Sbjct: 150 MNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAK 195
Score = 47 (21.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 232 DVFQVEERG--FYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAESERFVLTFTL 287
DV +VE G LK VS + G A + ALE S + ++ + + V +FT+
Sbjct: 319 DV-KVEFAGANLVLKTVSQRSPGQAVKIIAALEG-RSLEILHAKISTVDDTAVNSFTV 374
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 36/144 (25%), Positives = 69/144 (47%)
Query: 47 VISGCCDDSSTTPDSHLFDLSAAESTEVTDHNNFVLNSSTLSSLKIGGDVKEGDHYDEDN 106
V+ G ++ DS L + +++ +N V T + + G + Y+ +
Sbjct: 59 VLDGSNHQTNRNVDSRQDLLKPRKKQKLSSESNLVTEPKT--AWRDGQSLSS---YNSSD 113
Query: 107 DGNDASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDK 166
D + T+ + +K +G + +KRR ++ ++L L++LVPN TK+D
Sbjct: 114 DEKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDI 173
Query: 167 ASLVGDAVSYVQELQTTAKNLKAE 190
++++ DAV YV+ LQ K L +E
Sbjct: 174 STMLEDAVHYVKFLQLQIKLLSSE 197
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLK 188
+I+E+KRR K+ ++ +L ++P + KMDKA+++ DAV YV+E+Q L+
Sbjct: 194 IIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELE 245
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 39/162 (24%), Positives = 81/162 (50%)
Query: 140 EQKRRGKMKEKLYQLRALVPN--ITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEAS 197
E+ RR +M L LR+++P+ I + D+AS+VG A+ +V+ L+ ++L+A+ ++
Sbjct: 199 ERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRSQQSD 258
Query: 198 SGSSE-NWNESIENTKNTQIQ-SNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKGEGVAA 255
+ + S+ N + +++ SN K+ ++ V E LK+ + +G
Sbjct: 259 DNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVI---ESHVNLKIQCTRKQGQLL 315
Query: 256 SLYEALESLTSFNVQNSNLVAESERFVLTFTLNAKDNDQISM 297
LE L F V + N+ + + V +++ N K D+ ++
Sbjct: 316 RSIILLEKLR-FTVLHLNITSPTNTSV-SYSFNLKMEDECNL 355
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 42/162 (25%), Positives = 82/162 (50%)
Query: 144 RGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKA---EIADLEASSGS 200
R K EK LR +VP + ++DK S++ + + Y+QEL+ + L++ + +E +
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKT 405
Query: 201 SENWNES--IENTK-----NTQIQSNSTNSRKKIIMQMDVF---QVEERGFYLKLVSNKG 250
+EN N+S IE T +T+I NS + + + + +++E +++ +
Sbjct: 406 TENLNDSVLIEETSGNYDDSTKIDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSYR 465
Query: 251 EGVAASLYEALESL--TSFNVQNSNLVAESERFVLTFTLNAK 290
+ + A + E L +L +F+V++ L +F LT L AK
Sbjct: 466 DYIVADIMETLSNLHMDAFSVRSHTL----NKF-LTLNLKAK 502
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 40/132 (30%), Positives = 65/132 (49%)
Query: 109 NDASGAARTTTIIDASSKKPK-----GDHRSRTLISEQKRRGKMKEKLYQLRALVPNITK 163
+ A+ +A T KPK G I+E+ RR ++ E++ L+ LVPN K
Sbjct: 109 SQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK 168
Query: 164 MDKASLVGDAVSYVQELQTTAKNLKAEIADLEASSGS--SENWNESIENTKNTQIQSNST 221
DKAS++ + + YV+ LQ K L AS+ S SE+ S ENT ++ ++ T
Sbjct: 169 TDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISEDAGGSHENTSSSG-EAKMT 227
Query: 222 NSRKKIIMQMDV 233
+ +M+ D+
Sbjct: 228 EHQVAKLMEEDM 239
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 113 GAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGD 172
G I+DA + H +E++RR ++ L +LR+L+PN TK DKASL+ +
Sbjct: 91 GRVTAREIMDAKALAASRSHSE----AERRRRQRINGHLARLRSLLPNTTKTDKASLLAE 146
Query: 173 AVSYVQEL--QTTAKNLKAEIADLEASSGSSENWNESIENTKNTQIQ 217
+ +V+EL QTTA A D G+ E+ ++++ ++ Q
Sbjct: 147 VIEHVKELKRQTTAIAAAAAAGDYH---GNDEDDDDAVVGRRSAAAQ 190
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 33/118 (27%), Positives = 62/118 (52%)
Query: 69 AESTEVTDHNNFVLNSSTLSSLKIGGD-----VKEGDHYDEDNDGNDASGAARTTTIIDA 123
A + E+T ++ V++ S + K D +E DE ++ + AR +T
Sbjct: 222 APAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVST---T 278
Query: 124 SSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQ 181
S+K+ + +SE+KRR ++ E++ L+ L+P K DKAS++ +A+ Y++ LQ
Sbjct: 279 STKRSRAAEVHN--LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQ 334
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 125 SKKPKGDHRSRTL----ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQEL 180
SK+P R+R +SE++RR ++ EKL L+ LVP+ K DKAS++ +A+ Y++ L
Sbjct: 218 SKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSL 277
Query: 181 Q 181
Q
Sbjct: 278 Q 278
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 34/133 (25%), Positives = 67/133 (50%)
Query: 60 DSHLFDLSAAESTEVTDHNNFVLNSSTLSSLKIGGDVKEGDHYDEDNDGNDASGAARTTT 119
D H F+ + + T + V +SST++ + ++ + G D+ A +
Sbjct: 89 DEH-FEQQQKKPKKKTRTSRSVSSSSTITDYETSSELVNPSCSSGSSVGEDSIAATDGSV 147
Query: 120 IIDAS--SKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYV 177
++ S S+ K + + ++RR ++ E+L L+ LVPN TK+D ++++ +AV YV
Sbjct: 148 VLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYV 207
Query: 178 QELQTTAKNLKAE 190
+ LQ K L ++
Sbjct: 208 KFLQLQIKLLSSD 220
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 113 (44.8 bits), Expect = 0.00039, P = 0.00039
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 75 TDHNNFVLNSSTLSSLKIGGDVKEGDHYDEDN----DGNDASGAA----RTTTIIDASSK 126
T+ N V S K E + DE N DG S ++ + T + ++
Sbjct: 109 TNSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTR 168
Query: 127 KPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKN 186
KG + +KRR K+ E+L L+ LVPN TK+D ++++ +AV YV+ LQ K
Sbjct: 169 ATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKL 228
Query: 187 LKAE 190
L ++
Sbjct: 229 LSSD 232
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 104 EDNDGNDASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITK 163
+D+D +D G R + + H +SE++RR ++ EK+ L+ L+PN K
Sbjct: 289 QDDDLDDEPGVLRKSGTRSTKRSRTAEVHN----LSERRRRDRINEKMRALQELIPNCNK 344
Query: 164 MDKASLVGDAVSYVQELQ 181
+DKAS++ +A+ Y++ LQ
Sbjct: 345 IDKASMLDEAIEYLKTLQ 362
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 33/155 (21%), Positives = 69/155 (44%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLK-AEIADLE 195
+I+E+KRR K++++ L +VP + K DK SL+G + YV++L+ K L+ E
Sbjct: 289 VIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKALEEGSRRTAE 348
Query: 196 ASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKGEGVAA 255
++ ++++ S + + + LK+ + G+
Sbjct: 349 PTTAFESKCRITVDDDDGGSASSGTDDGSSSSSSPTVEASIHGNTVLLKICCKERRGLLV 408
Query: 256 SLYEALESLTSFNVQNSNLVAESERFVLTFTLNAK 290
+ LE ++ N+++V ++ L T+ AK
Sbjct: 409 MILSELEK-QGLSIINTSVVPFTDS-CLNITITAK 441
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLK-------AE 190
I+E+ RR ++ E++ L+ LVPN K DKAS++ + + YV+ LQ K L A
Sbjct: 151 IAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAS 210
Query: 191 IADLEASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKG 250
++ + +G S N S +Q NS +S Q+ E+ G ++ + KG
Sbjct: 211 VSSQISEAGGSHG-NASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKG 269
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 37/140 (26%), Positives = 71/140 (50%)
Query: 57 TTPDSHLFDLSAAE--STEVTDHNNFVLNSST--LSSLKIGGDVKE---GDHYDEDNDGN 109
+ P + D+S + S + + N +SS+ S G D+KE G D
Sbjct: 168 SNPSQNDLDVSMSHDRSKNIEEKLNPNASSSSGGSSGCSFGKDIKEMASGRCITTDRKRK 227
Query: 110 DASGAARTTTIIDA----SSKKPKGDHRSRTL----ISEQKRRGKMKEKLYQLRALVPNI 161
+ + ++ DA S+++ + RSR +SE++RR ++ E++ L+ L+P+
Sbjct: 228 RINHTDESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHC 287
Query: 162 TKMDKASLVGDAVSYVQELQ 181
+K DKAS++ +A+ Y++ LQ
Sbjct: 288 SKTDKASILDEAIDYLKSLQ 307
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 20/53 (37%), Positives = 40/53 (75%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKA 189
++SE++RR K+ E L++LVP+I K+DKAS++ + ++Y++EL+ + L++
Sbjct: 190 VMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELES 242
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 108 (43.1 bits), Expect = 0.00089, P = 0.00089
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEI 191
+E+KRR ++ L LR LVP+ ++MDKA+L+G+ V YV++L++ A A +
Sbjct: 35 AERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSEAAGSAAVV 87
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 112 (44.5 bits), Expect = 0.00092, P = 0.00092
Identities = 41/125 (32%), Positives = 63/125 (50%)
Query: 103 DEDNDGNDASGAARTTTIIDASSK-KPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNI 161
D+ + G A R ASS + RS+ +EQ+RR K+ ++L LR L+P+
Sbjct: 116 DQRSIGQTPYEATRAEGRSSASSADQGPSTPRSKHSATEQRRRTKINDRLEILRELLPHT 175
Query: 162 T-KMDKASLVGDAVSYVQELQTTAKNLKAEIADLEASSGSSEN--WNESI-----ENTKN 213
K DKAS + + + Y++ LQ + K E AD E + S++ W + NTKN
Sbjct: 176 DQKRDKASFLSEVIEYIRFLQEKVQ--KYEEADPERNHEDSKSMPWAKVYYRSCWRNTKN 233
Query: 214 T-QIQ 217
T Q+Q
Sbjct: 234 TSQVQ 238
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 111 (44.1 bits), Expect = 0.00098, P = 0.00098
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 109 NDASGAARTTTIIDASSKKPKGDHRSRT---LISEQKRRGKMKEKLYQLRALVPNITKMD 165
ND+ G+ + ++ K G HRS T + +KRR ++ E+L L+ LVPN TK+D
Sbjct: 203 NDSIGSQESPVAAKSNGKAQSG-HRSATDPQSLYARKRRERINERLKILQNLVPNGTKVD 261
Query: 166 KASLVGDAVSYVQELQTTAKNLKAE 190
++++ +A+ YV+ LQ K L ++
Sbjct: 262 ISTMLEEAMHYVKFLQLQIKLLSSD 286
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.126 0.345 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 324 312 0.00080 116 3 11 23 0.48 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 75
No. of states in DFA: 599 (64 KB)
Total size of DFA: 200 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.40u 0.16s 35.56t Elapsed: 00:00:01
Total cpu time: 35.41u 0.16s 35.57t Elapsed: 00:00:01
Start: Fri May 10 09:24:34 2013 End: Fri May 10 09:24:35 2013