BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042465
(324 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/331 (49%), Positives = 215/331 (64%), Gaps = 30/331 (9%)
Query: 1 MDAFGNPLKQSNDFELHEFIDDQNFDQFIDLIRGE----NEDPFATFDCRVI--SGCCDD 54
M+ N L ND ELH F+ D NFDQFI+LIRG+ +E+P FD + S C D
Sbjct: 1 MEGRVNALSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFID 60
Query: 55 SS---TTPDSHLFDLSAAESTEVTDHNNFV---LNSSTLSSLKIGGDVKEGDHYDEDNDG 108
+ TP LFD E+ D ++ V S S++ GG+ E D+ NDG
Sbjct: 61 ENQFIPTPVDDLFD-------ELPDLDSNVAESFRSFDGDSVRAGGEEDEEDY----NDG 109
Query: 109 NDASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKAS 168
+D+S TT + ++K K D RSRTLISE++RRG+MK+KLY LR+LVPNITKMDKAS
Sbjct: 110 DDSSA----TTTNNDGTRKTKTD-RSRTLISERRRRGRMKDKLYALRSLVPNITKMDKAS 164
Query: 169 LVGDAVSYVQELQTTAKNLKAEIADLEASSGSSENWNESIENTKNTQIQSNSTNSRKKII 228
+VGDAV YVQELQ+ AK LK++IA LEAS S+ + E + + TQ K I
Sbjct: 165 IVGDAVLYVQELQSQAKKLKSDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKI 224
Query: 229 MQMDVFQVEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAES-ERFVLTFTL 287
+QMDV QVEE+GFY++LV NKGEGVA SLY++LESLTSF VQNSNL + S + ++LT+TL
Sbjct: 225 IQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTL 284
Query: 288 NAKDNDQISMQLPNLKLWVANALLNQGFQVL 318
+ +Q S+ LPNLKLW+ +LLNQGF+ +
Sbjct: 285 DGTCFEQ-SLNLPNLKLWITGSLLNQGFEFI 314
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 112/207 (54%), Gaps = 14/207 (6%)
Query: 101 HYDEDNDGNDASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPN 160
YD +A + ++ D ++ P S+ ++SE+ RR K+ ++L+ LR++VPN
Sbjct: 25 EYDRSWPLEEAISGSYDSSSPDGAASSPA----SKNIVSERNRRQKLNQRLFALRSVVPN 80
Query: 161 ITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEASSGSSENWNE--------SIENTK 212
ITKMDKAS++ DA+SY++ LQ K L+AEI +LE++ SS ++++ + + K
Sbjct: 81 ITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKK 140
Query: 213 NTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNS 272
Q+ S S+ S + ++++ V + ER + + NK L E ESL + + S
Sbjct: 141 MKQLDSGSSTSLIE-VLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESL-NLKILTS 198
Query: 273 NLVAESERFVLTFTLNAKDNDQISMQL 299
NL + S T + A + +Q ++L
Sbjct: 199 NLTSFSGMIFHTVFIEADEEEQEVLRL 225
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 99/183 (54%), Gaps = 21/183 (11%)
Query: 133 RSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIA 192
+++ L++E++RR K+ ++LY LR+LVP ITK+D+AS++GDA++YV+ELQ AK L+ E+
Sbjct: 312 QAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELE 371
Query: 193 D-LEASSGSSE-------------------NWNESIENTKNTQIQSNSTNSRKKIIMQMD 232
+ E GS+ + N ++ + K NS + +++ Q+D
Sbjct: 372 ENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVD 431
Query: 233 VFQVEERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAESERFVLTFTLNAKDN 292
V Q++ R F++K++ G L EAL+SL V N+N F + DN
Sbjct: 432 VAQLDGREFFVKVICEYKPGGFTRLMEALDSL-GLEVTNANTTRYLSLVSNVFKVEKNDN 490
Query: 293 DQI 295
+ +
Sbjct: 491 EMV 493
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 122 DASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQ 181
D ++ P S+ ++SE+ RR K+ ++L+ LR++VPNI+K+DKAS++ D++ Y+QEL
Sbjct: 44 DGAATSPAS---SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELI 100
Query: 182 TTAKNLKAEIADLEASSGSSENWNESIE-NTKNTQIQSNSTNS--RKKIIMQMDV----- 233
K L+AEI +LE+ S EN + N T +Q S N+ R K QMD
Sbjct: 101 DQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQ 160
Query: 234 -FQVE----------ERGFYLKLVSNKGEGVAASLYEALESLTSFNVQNSNLVAESERFV 282
+ +E E+ + + +K L + LESL + N+ +N + + R
Sbjct: 161 HYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESL-NLNILTTNFSSFTSRLS 219
Query: 283 LTFTLNA 289
T L
Sbjct: 220 TTLFLQV 226
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 134 SRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIAD 193
++ L++E++RR K+ ++LY LR++VP I+KMD+AS++GDA+ Y++EL +L E+
Sbjct: 266 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 194 LEASSGSSENWNESIE----NTKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNK 249
SS S + + K S+S S K +++V E + + + +
Sbjct: 326 TPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCGR 385
Query: 250 GEGVAASLYEALESL 264
G+ S AL++L
Sbjct: 386 RPGLLLSTMRALDNL 400
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEASS 198
+E++RR K+ ++ Y LR++VPNI+KMDKASL+GDAVSY+ EL K ++AE L SS
Sbjct: 437 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERLGYSS 496
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 15/161 (9%)
Query: 115 ARTTTIIDASSKKPKGDHRSRT---------LISEQKRRGKMKEKLYQLRALVPNITKMD 165
A + ++ KKP+ R + +E++RR K+ ++ Y LRA+VPN++KMD
Sbjct: 387 AESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMD 446
Query: 166 KASLVGDAVSYVQELQTTAKNLKAEIADLEASSGSSENWNESIENTKNTQIQSNSTNSRK 225
KASL+GDA+SY+ EL++ + KAE +D E + N+ N K++ N
Sbjct: 447 KASLLGDAISYISELKSKLQ--KAE-SDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQES 503
Query: 226 KIIMQMDVFQVEERGF--YLKLVSNKGEGVAASLYEALESL 264
++++M+V V+ G+ +++ +K A EAL+ L
Sbjct: 504 SVLIEMEV-DVKIIGWDAMIRIQCSKRNHPGAKFMEALKEL 543
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 128 PKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNL 187
P + +S+ L SE+KRR ++ + +Y LRA+VP ITK++K + DAV Y+ EL + L
Sbjct: 257 PTENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKL 316
Query: 188 KAE---IADLEASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLK 244
+ E I ++E ++E +I + + ++ S S KK ++++V + ER F ++
Sbjct: 317 EDELKGINEMECKEIAAEE-QSAIADPEAERVSSKSNKRVKKNEVKIEVHETGERDFLIR 375
Query: 245 LVSNKGEGVAASLYEALE 262
+V + L EA++
Sbjct: 376 VVQEHKQDGFKRLIEAVD 393
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEASS 198
+E++RR K+ ++ Y LR++VPNI+KMDKASL+GDA+SY++ELQ K ++ E + S
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKS- 457
Query: 199 GSSENWNESIENTKNTQIQSNSTNSRKKIIMQMD 232
SE+ ++E + IQ+ + ++I +D
Sbjct: 458 -LSESNTITVEESPEVDIQAMNEEVVVRVISPLD 490
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 16/174 (9%)
Query: 105 DNDGND-ASGAARTTTIIDASSKKPKGDHRSRT---------LISEQKRRGKMKEKLYQL 154
D+D +D + + +++ KKP+ R + +E++RR K+ ++ Y L
Sbjct: 375 DSDHSDLEASVVKEAIVVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSL 434
Query: 155 RALVPNITKMDKASLVGDAVSYVQELQTT---AKNLKAEI-ADLEASSGSSENWNESIEN 210
RA+VPN++KMDKASL+GDA+SY+ EL++ A++ K EI L+ S N
Sbjct: 435 RAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSR 494
Query: 211 TKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKGEGVAASLYEALESL 264
K + SN ++ I M++DV ++ +++ K + A EAL+ L
Sbjct: 495 AKERK-SSNQDSTASSIEMEIDV-KIIGWDVMIRVQCGKKDHPGARFMEALKEL 546
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Query: 133 RSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIA 192
+S L +E++RR K+ +L LR+ VP +T M KAS+V DA++Y+ ELQ KNL
Sbjct: 30 KSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFH 89
Query: 193 DLEASSGSSENWNESIENTKNTQIQSNSTNSRKK---IIMQMDVFQVEERGFYLKLVSNK 249
++E + + E + +++++ N K I + + ++ ER F+LK+++ K
Sbjct: 90 EMEEAPPEID--EEQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKIITEK 147
Query: 250 GEGVAASLYEALESL 264
+G+ E + L
Sbjct: 148 RDGIFTKFMEVMRFL 162
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 103 DEDNDGNDASGAART------TTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRA 156
D GN G+ R TT + A++K+ + +E++RR K+ + Y LRA
Sbjct: 211 DHSKSGNQQFGSERKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRA 270
Query: 157 LVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEAS 197
+VP +++MDKASL+ DAVSY++ L++ +L+ EI ++ +
Sbjct: 271 IVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMKMT 311
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
Query: 112 SGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVG 171
SG A + I K K ++ L++E++RR K+ ++LY LR++VP I+KMD+AS++G
Sbjct: 284 SGKAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILG 343
Query: 172 DAVSYVQELQTTAKNLKAEI-----ADLEASSGSSENWN---ESIENTKNTQIQSNSTNS 223
DA+ Y++EL +L E+ L +S S +++ ++ +S S
Sbjct: 344 DAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPS 403
Query: 224 RKKIIMQMDVFQVEERGFYLKLVSNKGEGVAASLYEALESL 264
K +++V E R + + + G+ + +AL++L
Sbjct: 404 PKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNL 444
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 42/52 (80%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAE 190
+E++RR K+ ++ Y LRA+VPN++KMDKASL+GDA++Y+ EL++ ++E
Sbjct: 456 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESE 507
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 42/57 (73%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLE 195
+E+ RR K+ + Y LRA+VPN++KMDK SL+ DAV Y+ EL++ A+N++ E +E
Sbjct: 347 AERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIE 403
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 45/64 (70%)
Query: 125 SKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTA 184
++K +G +SRT +E++RR ++ + L+ L+PN TK+D+AS+VG+A+ Y++EL T
Sbjct: 237 TRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTI 296
Query: 185 KNLK 188
+ K
Sbjct: 297 EEFK 300
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAE 190
+E++RR K+ ++ Y LRA+VPNI+KMDKASL+ DA++Y+ ++Q + + E
Sbjct: 324 AERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETE 375
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 77 HNNFVLNSSTLSSLKIGGDVKEGDH-----YDEDNDGNDASGAARTTTIIDASSKKPKGD 131
H NF L S + + D E + YDE+N+ D D ++K +G
Sbjct: 164 HLNFPLQPPNGSFMGVDQDQTETNQGVNLMYDEENNNLD-----------DGLNRKGRGS 212
Query: 132 HRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLK 188
+ + +E++RR K++ L+ L+PN TK D+AS+VG+A+ Y++EL T K
Sbjct: 213 KKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEFK 269
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLK 188
+++E++RR K+ EK LR++VP +TKMDK S++GD ++YV L+ L+
Sbjct: 365 VVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 81 VLNSSTLSSLKIGGDVKEGDHYDEDNDGNDASGAARTTTIIDASS---KKPKGDHRSRTL 137
++ S+ S +G D DE N G++ + A + II+ S +K +G +++
Sbjct: 157 LIPSNDYSGYLLGIDTNTTTQRDESNVGDENNNAQFDSGIIEFSKEIRRKGRGKRKNKPF 216
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLK 188
+E++RR + E+ L+ L+P+ +K D+AS++ D + Y+ EL+ LK
Sbjct: 217 TTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELK 267
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 95 DVKEGDHYDEDNDGNDASGAARTTTIIDASSKKPKGDHRSRTL----ISEQKRRGKMKEK 150
D D +E DG +G +RT G RSR+ +SE++RR ++ EK
Sbjct: 313 DCHSEDVEEESGDGRKEAGPSRTGL----------GSKRSRSAEVHNLSERRRRDRINEK 362
Query: 151 LYQLRALVPNITKMDKASLVGDAVSYVQELQ 181
+ L+ L+PN K+DKAS++ +A+ Y++ LQ
Sbjct: 363 MRALQELIPNCNKVDKASMLDEAIEYLKSLQ 393
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKA--EIADLE 195
+SE+KRR K+ E+ LR+++P+I+K+DK S++ D + Y+Q+LQ + L++ E AD E
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAE 190
+I+E+KRR K+ ++ L ALVP + KMDKAS++GDA+ +++ LQ L+ +
Sbjct: 154 IIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQ 207
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 33/175 (18%)
Query: 124 SSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTT 183
S+KK +G S+ L++E++RR ++ ++L LR++VP ITKMD+ S++GDA+ Y++EL
Sbjct: 141 SNKKLEG-QPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDK 199
Query: 184 AKNLKAEIADLEASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGF-- 241
L+ + +L GS+ + + I N +S NS K F+V++R
Sbjct: 200 INKLQEDEQEL----GSNSHLSTLITN------ESMVRNSLK--------FEVDQREVNT 241
Query: 242 YLKLVSNKGEGVAASLYEALESL------------TSFNVQNSNLVAESERFVLT 284
++ + G+ S LE+L + F++Q S +R+++T
Sbjct: 242 HIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVT 296
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 35/45 (77%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQ 181
+++E+KRR K+ ++ L AL+P + KMDKAS++GDA+ +++ LQ
Sbjct: 128 ILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQ 172
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 125 SKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTA 184
SKK +G S+ L++E++RR ++ ++L LR++VP I+KMD+ S++GDA+ Y++EL
Sbjct: 169 SKKLEG-QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKI 227
Query: 185 KNLKAEIADLEASSGS 200
L+ E +L S+ S
Sbjct: 228 NKLQDEEQELGNSNNS 243
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 105 DNDGNDASGAARTTTIIDA----SSKKPKGDHRSRT-------LISEQKRRGKMKEKLYQ 153
D N S A I+D +K+ H +R+ +++E+KRR K+ EK
Sbjct: 78 DFSSNVISSPAAEEIIMDKLVGRGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIA 137
Query: 154 LRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAE 190
L AL+P + K DK +++ DA+S +++LQ + LK E
Sbjct: 138 LSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEE 174
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNL 187
+SE+KRR K+ EK+ L+ L+PN K DKAS++ +A+ Y+++LQ + L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 39/54 (72%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAE 190
+++E+KRR K+ E+L L AL+P + K DKA+++ DA+ ++++LQ K L+ E
Sbjct: 134 VLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEE 187
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKA 189
+ E+KRR K+ E+ LR ++P+I K+DK S++ D + Y+QEL+ + L++
Sbjct: 444 VLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELES 495
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 37/50 (74%)
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNL 187
+SE++RR ++ EK+ L++L+PN K DKAS++ +A+ Y+++LQ + L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 94 GDVKEGDHYDEDNDGNDASGAARTTTIIDASSKKPKGDHRSRTLIS---EQKRRGKMKEK 150
GD++E + N+ +D S A+T + A ++KP + T + E+KRR + +K
Sbjct: 191 GDIEEEESTYLSNNSDDESDDAKTQ--VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKK 248
Query: 151 LYQLRALVPNITKMDKASLVGDAVSYVQELQ 181
+ L+ L+PN K DKASL+ +A+ Y++ LQ
Sbjct: 249 MRALQDLLPNCYKDDKASLLDEAIKYMRTLQ 279
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEAS 197
I+E+ RR ++ E++ L+ LVPN K DKAS++ + + YV+ LQ K L AS
Sbjct: 143 IAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAS 202
Query: 198 SGS--SENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKG 250
+ S SE+ S ENT +S+ K Q+ E+ G ++ + KG
Sbjct: 203 ASSQISEDAGGSHENT-------SSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKG 250
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 40/53 (75%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKA 189
++SE+KRR K+ E L++L+P+I +++KAS++ + ++Y++ELQ + L++
Sbjct: 418 VMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELES 470
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 40/53 (75%)
Query: 137 LISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLKA 189
++SE+KRR K+ E L++L+P+I +++KAS++ + ++Y++ELQ + L++
Sbjct: 420 VMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELES 472
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 33/43 (76%)
Query: 139 SEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQ 181
SE+KRR K+ +++ L+ LVPN +K DKAS++ + + Y+++LQ
Sbjct: 221 SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 263
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLK-------AE 190
I+E+ RR ++ E++ L+ LVPN K DKAS++ + + YV+ LQ K L A
Sbjct: 151 IAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAS 210
Query: 191 IADLEASSGSSENWNESIENTKNTQIQSNSTNSRKKIIMQMDVFQVEERGFYLKLVSNKG 250
++ + +G S N S +Q NS +S Q+ E+ G ++ + KG
Sbjct: 211 VSSQISEAGGSHG-NASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKG 269
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 18/122 (14%)
Query: 69 AESTEVTDHNNFVLNSSTLSSLKIGGD-----VKEGDHYDEDNDGNDASGAARTTTIIDA 123
A + E+T ++ V++ S + K D +E DE ++ + AR +T
Sbjct: 222 APAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTT--- 278
Query: 124 SSKKPKGDHRSRTL----ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQE 179
S+K RSR +SE+KRR ++ E++ L+ L+P K DKAS++ +A+ Y++
Sbjct: 279 STK------RSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKS 332
Query: 180 LQ 181
LQ
Sbjct: 333 LQ 334
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%)
Query: 102 YDEDNDGNDASGAARTTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNI 161
Y+ +D + T+ + +K +G + +KRR ++ ++L L++LVPN
Sbjct: 109 YNSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNG 168
Query: 162 TKMDKASLVGDAVSYVQELQTTAKNLKAE 190
TK+D ++++ DAV YV+ LQ K L +E
Sbjct: 169 TKVDISTMLEDAVHYVKFLQLQIKLLSSE 197
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 90 LKIGGDVKEGDHYDEDNDGNDASGAARTTTI---IDASSKKPKGDHRSRTLISEQKRRGK 146
++ G +E + Y E++ + G + TT+ D+ RS+ ++EQ+RR K
Sbjct: 1 MRTGKGNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSK 60
Query: 147 MKEKLYQLRALVPNI-TKMDKASLVGDAVSYVQELQTTAKNLKAEIADLEASSGSSENWN 205
+ E+ LR L+PN K D AS + + + YVQ LQ + + GS W+
Sbjct: 61 INERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYE----------GSYPGWS 110
Query: 206 ESIENTKNTQIQSN 219
+ E TK T ++N
Sbjct: 111 Q--EPTKLTPWRNN 122
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 112 SGAARTTTIIDA--SSKKPKGDHRSRTLIS------EQKRRGKMKEKLYQLRALVPNITK 163
+GAA ++ + S KPK S+ + + E++RR ++ + LR ++PN+ K
Sbjct: 64 AGAATSSKLFSRGFSVTKPKSKTESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLVK 123
Query: 164 MDKASLVGDAVSYVQELQTTAKNL 187
DKAS++G+ V Y EL+ +++
Sbjct: 124 QDKASVLGETVRYFNELKKMVQDI 147
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 117 TTTIIDASSKKPKGDHRSRTLISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSY 176
+ T + ++ KG + +KRR K+ E+L L+ LVPN TK+D ++++ +AV Y
Sbjct: 159 SVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHY 218
Query: 177 VQELQTTAKNLKAE 190
V+ LQ K L ++
Sbjct: 219 VKFLQLQIKLLSSD 232
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 103 DEDNDGNDASGAARTTTIIDASSKKPKGDHRSRTLI----SEQKRRGKMKEKLYQLRALV 158
+E N N + AR D++S K RSR I SE++RR K+ E + L+ L+
Sbjct: 255 EETNVENQGTEEAR-----DSTSSK-----RSRAAIMHKLSERRRRQKINEMMKALQELL 304
Query: 159 PNITKMDKASLVGDAVSYVQELQT 182
P TK D++S++ D + YV+ LQ+
Sbjct: 305 PRCTKTDRSSMLDDVIEYVKSLQS 328
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNL 187
I+E+ RR ++ E++ L+ LVPN K DKAS++ + + YV+ LQ K L
Sbjct: 112 IAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 133 RSRTL----ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTAKNLK 188
RSRT ++E++RR K+ EK+ L+ L+P K K S + DA+ YV+ LQ+ + +
Sbjct: 253 RSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGMM 312
Query: 189 AEI 191
+ +
Sbjct: 313 SPM 315
>sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2
SV=2
Length = 308
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 93 GGDVKEGDHYDEDNDGNDASGAARTTTIIDASSKKPKGD--HRSRT------LISEQKRR 144
GG K + + + S +TTT+ + + D H + + +E++RR
Sbjct: 23 GGGCKRIEKEPLPSHPSHPSPEIQTTTVKKGKKRTKRNDKNHEEESPDHEIHIWTERERR 82
Query: 145 GKMKEKLYQLRALVPNIT-KMDKASLVGDAVSYVQELQTTAKNLKAE-IADLEASSGS 200
KM++ +L AL+P + K DK+++V +AVS ++ L+ T + L+ + + L+ SS S
Sbjct: 83 KKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKLQYSSAS 140
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 130 GDHRSRTLISEQKRRGKMKEKLYQLRALVP--NITKMDKASLVGDAVSYVQELQTTAKNL 187
G + + E+ RR +M E L LR+L+P + + D+AS++G V Y+ ELQ ++L
Sbjct: 98 GQQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSL 157
Query: 188 KAE 190
+A+
Sbjct: 158 EAK 160
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 131 DHRSRTLISEQKRRGKMKEKLYQLRALVPN--ITKMDKASLVGDAVSYVQELQTTAKNLK 188
+ R + E+ RR +M E L LR+L+P + + D+AS+VG A+ +++EL+ ++L+
Sbjct: 112 NQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLE 171
Query: 189 AE 190
AE
Sbjct: 172 AE 173
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis thaliana GN=BIM1 PE=1 SV=2
Length = 529
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 133 RSRTLISEQKRRGKMKEKLYQLRALVPNI-TKMDKASLVGDAVSYVQELQTTA 184
RS+ +EQ+RR K+ ++ LR L+PN K DKAS + + + Y+Q LQ A
Sbjct: 278 RSKHSATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKA 330
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 138 ISEQKRRGKMKEKLYQLRALVPNITKMDKASLVGDAVSYVQELQTTA 184
++E++RR ++ L LR LVPN K+DKA+L+ + V+EL+ A
Sbjct: 69 LAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKA 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.127 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,848,883
Number of Sequences: 539616
Number of extensions: 4355367
Number of successful extensions: 12753
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 218
Number of HSP's that attempted gapping in prelim test: 12347
Number of HSP's gapped (non-prelim): 530
length of query: 324
length of database: 191,569,459
effective HSP length: 118
effective length of query: 206
effective length of database: 127,894,771
effective search space: 26346322826
effective search space used: 26346322826
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)