BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042466
(178 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 102/142 (71%), Gaps = 1/142 (0%)
Query: 11 YDVFVSFRGEDTRDNFTSHLYSALSRQNIQTFIDDQ-LNRGDEISESLVNAIEASAISVI 69
YDVF+SFRGEDTR FTSHLY L+ + I+TF DD+ L G I L AIE S +++
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 70 IFSESYPSSRWCLDELVKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSFSKLEERF 129
+FSE+Y +SRWCL+ELVKI+ECK + Q +IP+FY VDPS VRNQ SF +F + E ++
Sbjct: 72 VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131
Query: 130 KENSKKLQTWRKALKEAASLSG 151
K++ + +Q WR AL EAA+L G
Sbjct: 132 KDDVEGIQRWRIALNEAANLKG 153
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 112/173 (64%), Gaps = 7/173 (4%)
Query: 1 MASSYRNNKKYDVFVSFRGEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDEISESLVNA 60
MASS N+ +YDVF SFRGED R+NF SHL + I TF DD + R I L A
Sbjct: 1 MASSSSNSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAA 60
Query: 61 IEASAISVIIFSESYPSSRWCLDELVKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGD 120
I S ISV++FSE+Y SS WCLDEL++I++CK+E ++PVFY+VDPSD+R QTG FG
Sbjct: 61 IRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGM 120
Query: 121 SFSKLEERFKENSKKLQTWRKALKEAASLSG-----FPSQSIRINNKSKRILQ 168
SF LE + ++ WR+AL +AA++ G + +++ +I SK +L+
Sbjct: 121 SF--LETCCGKTEERQHNWRRALTDAANILGDHPQNWDNEAYKITTISKDVLE 171
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 111/171 (64%), Gaps = 8/171 (4%)
Query: 3 SSYRNNKKYDVFVSFRGEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDEISESLVNAIE 62
+S +++YDVF SFRGED RD+F SHL L + I TFIDD++ R I L++AI+
Sbjct: 4 ASSSGSRRYDVFPSFRGEDVRDSFLSHLLKELRGKAI-TFIDDEIERSRSIGPELLSAIK 62
Query: 63 ASAISVIIFSESYPSSRWCLDELVKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSF 122
S I+++IFS++Y SS WCL+ELV+I +C Q++IP+F+ VD S+V+ QTG FG F
Sbjct: 63 ESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGKVF 122
Query: 123 SKLEERFKENSKKLQTWRKALKEAASLSGF-----PSQSIRINNKSKRILQ 168
+ + E+ K Q+W++AL A ++G+ PS++ I ++ +L+
Sbjct: 123 EETCKAKSEDEK--QSWKQALAAVAVMAGYDLRKWPSEAAMIEELAEDVLR 171
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
Query: 13 VFVSFRGEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDEISESLVNAIEASAISVIIFS 72
VF++FRG+D R F S L AL ++ I FID+Q RG + SL + I S I+++IFS
Sbjct: 24 VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLI-SLFDTIGESKIALVIFS 82
Query: 73 ESYPSSRWCLDELVKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSFSKLEERFKEN 132
E Y S WC+DELVKI E + I+IP+FYR+D V++ TG FGD+F L ++++
Sbjct: 83 EGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQPE 142
Query: 133 SKKLQTWRKALKEAASL 149
KKL W +AL L
Sbjct: 143 PKKLHKWTEALFSVCEL 159
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 90/153 (58%), Gaps = 6/153 (3%)
Query: 13 VFVSFRGEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDEISESLVNAIEASAISVIIFS 72
VF++FRG+D R+ F S L A+ NI FID G ++ V I+ S ++V+IFS
Sbjct: 16 VFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVVGTDLVNLFVR-IQESRVAVVIFS 74
Query: 73 ESYPSSRWCLDELVKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSFSKLEERFKEN 132
+ Y SS WCLDEL +I +C + IP+FY++ PS V G FGD+F L+E++K +
Sbjct: 75 KDYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSVLELKGGFGDTFRVLKEKYKND 134
Query: 133 SKKLQTWRKALKEAASLSGFPSQSIRINNKSKR 165
++ Q W++AL+ L G +R+ KS R
Sbjct: 135 PERTQKWQEALESIPKLKG-----LRLAEKSDR 162
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Query: 10 KYDVFVSFRGEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDEISESLVNAIEASAISVI 69
+Y VF++FRG++ R++F L A+ + I F D+ RG ++ L IE S ++V
Sbjct: 357 QYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVELRGTNLN-YLFRRIEESRVAVA 415
Query: 70 IFSESYPSSRWCLDELVKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSFSKLEERF 129
IFSE Y S WCLDELVK+ E ++ +++PVFYR++ + + G+FGD+ LE +
Sbjct: 416 IFSERYTESCWCLDELVKMKEQMEQGKLVVVPVFYRLNATACKRFMGAFGDNLRNLEWEY 475
Query: 130 KENSKKLQTWRKALKEAASLSGFPSQSIRIN 160
+ +++Q W++AL S G S R N
Sbjct: 476 RSEPERIQKWKEALSSVFSNIGLTSDIRRYN 506
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 13 VFVSFRGEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDEISESLVNAIEASAISVIIFS 72
VF+ FRG D R +F S L AL NI FID+ G E++ +L+ IE S ++++IFS
Sbjct: 17 VFICFRGADVRKHFISFLVPALREANINVFIDENEFLGSEMA-NLLTRIEESELALVIFS 75
Query: 73 ESYPSSRWCLDELVKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSFSKLEERFKEN 132
+ S CL+EL KI E K + I+IP+FY+V PS V+ G FGD+F LE +
Sbjct: 76 VDFTRSHRCLNELAKIKERKDQGRLIVIPIFYKVKPSAVKFLEGKFGDNFRALERNNRHM 135
Query: 133 SKKLQTWRKALKEAASLSGFP--SQSIRINN 161
Q W++AL+ G P QS R +N
Sbjct: 136 LPITQKWKEALESIPGSIGMPLAEQSERTDN 166
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 20 EDTRDNFTSHLYSALSRQNIQ-TFIDDQLNRGDEISESLVNAIEASAISVIIFSESYPSS 78
E+ R +F SHL AL R+ + FID D +S + +E + +SV+I P +
Sbjct: 14 EEVRYSFVSHLSKALQRKGVNDVFIDSD----DSLSNESQSMVERARVSVMIL----PGN 65
Query: 79 RWC-LDELVKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSFSKLEERFKENS 133
R LD+LVK+L+C+K Q+++PV Y V S+ + FS + KE S
Sbjct: 66 RTVSLDKLVKVLDCQKNKDQVVVPVLYGVRSSETEWLSALDSKGFSSVHHSRKECS 121
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 31/152 (20%)
Query: 5 YRNNKKYDVFVSF-RGEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDEISESLVNAIEA 63
+ ++K YDV + + R + + ++F SHL ++L R+ I + ++ N V+A+
Sbjct: 662 FSSSKDYDVVIRYGRADISNEDFISHLRASLCRRGISVY--EKFNE--------VDALPK 711
Query: 64 SAISVIIFSESYPSSRWCLDELVKILECKKEYAQILIPVFYRVDPSD-VRNQTGSFGDSF 122
+ +I+ + +Y S L+ ILE + +++ P+FYR+ P D V N
Sbjct: 712 CRVLIIVLTSTYVPS-----NLLNILEHQHTEDRVVYPIFYRLSPYDFVCN--------- 757
Query: 123 SKLEERF--KENSKKLQTWRKALKEAASLSGF 152
SK ERF ++ KK W+ ALKE + G+
Sbjct: 758 SKNYERFYLQDEPKK---WQAALKEITQMPGY 786
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 20 EDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDEISESLVNAIEASAISVIIFSESYPSSR 79
ED + L L +NI FID++ RG + ++L I+ S IS+ IFSE S+
Sbjct: 51 EDVSKGLINFLEPVLQNKNINVFIDEEEVRGKGL-KNLFKRIQDSKISLAIFSE----SK 105
Query: 80 WCLDELVKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGD 120
++L+K E A IP+FY+VD TG D
Sbjct: 106 CDFNDLLK----NNESADEAIPIFYKVD------ATGDLAD 136
>sp|P55546|Y4LF_RHISN Uncharacterized protein y4lF OS=Rhizobium sp. (strain NGR234)
GN=NGR_a02690 PE=4 SV=1
Length = 323
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 13 VFVSFRGED--TRDNFTSHLYSALSRQN-IQTFIDDQLNRGDEISESLVNAIEASAISVI 69
VF S+ D RD L S L RQ I+T+ D ++ G++I ++ + I I ++
Sbjct: 4 VFFSYSHADEGLRDQLEKQL-SMLKRQGVIETWHDRRIGAGEDIHRAIDDHINTDDIILL 62
Query: 70 IFSESYPSSRWCLD-ELVKILECKKEYAQILIPVFYRV 106
+ S + +S +C D E+ + +E I+IP+ R
Sbjct: 63 LVSADFIASDYCYDIEMQRAMERHHSGEAIVIPIILRA 100
>sp|Q9EPQ1|TLR1_MOUSE Toll-like receptor 1 OS=Mus musculus GN=Tlr1 PE=1 SV=1
Length = 795
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 8 NKKYDVFVSFRGEDTRDNFTSHLYSALSRQNIQTFIDDQ-LNRGDEISESLVNAIEASAI 66
N ++ FVS+ G D+ + L L + +IQ + ++ G I E+++N IE S
Sbjct: 637 NLQFHAFVSYSGHDSAW-VKNELLPNLEKDDIQICLHERNFVPGKSIVENIINFIEKSYK 695
Query: 67 SVIIFSESYPSSRWCLDEL 85
S+ + S + S WC EL
Sbjct: 696 SIFVLSPHFIQSEWCHYEL 714
>sp|Q9Y2C9|TLR6_HUMAN Toll-like receptor 6 OS=Homo sapiens GN=TLR6 PE=1 SV=2
Length = 796
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 8 NKKYDVFVSFRGEDTRDNFTSHLYSALSRQNIQTFIDDQ-LNRGDEISESLVNAIEASAI 66
N ++ F+S+ D+ S L L +++IQ + ++ G I E+++N IE S
Sbjct: 639 NLQFHAFISYSEHDSA-WVKSELVPYLEKEDIQICLHERNFVPGKSIVENIINCIEKSYK 697
Query: 67 SVIIFSESYPSSRWCLDEL 85
S+ + S ++ S WC EL
Sbjct: 698 SIFVLSPNFVQSEWCHYEL 716
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 7 NNKKYDVFVSFRG-EDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDEISESLVNAIEASA 65
N +K + FV E+ R +F SHL AL R+ I + D ES IE +
Sbjct: 3 NCEKDEEFVCISCVEEVRYSFVSHLSEALRRKGINNVVVDVDIDDLLFKESQAK-IEKAG 61
Query: 66 ISVIIFSESY-PSSRWCLDELVKILECKKEYA-QILIPVFY 104
+SV++ + PS W LD+ K+LEC++ Q ++ V Y
Sbjct: 62 VSVMVLPGNCDPSEVW-LDKFAKVLECQRNNKDQAVVSVLY 101
>sp|Q17RQ9|NKPD1_HUMAN NTPase KAP family P-loop domain-containing protein 1 OS=Homo
sapiens GN=NKPD1 PE=2 SV=1
Length = 610
Score = 34.3 bits (77), Expect = 0.42, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 112 RNQTGSFGDSFSKLEERFKENSKKLQTWRKALKEAASLSGFP 153
R QTG + ++L + F++NS++L T KAL+ L G P
Sbjct: 455 RQQTGGAPEGRARLWDVFRDNSRELHTMTKALQNVLDLDGDP 496
>sp|Q6R5N8|TLR13_MOUSE Toll-like receptor 13 OS=Mus musculus GN=Tlr13 PE=1 SV=1
Length = 991
Score = 33.5 bits (75), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 11 YDVFVSFRGEDTRDNFTSHLYSALSRQNIQTF----IDDQLNRGDEISESLVNAIEASAI 66
YD FVSF D + L AL + + TF G +I E++ NAI S
Sbjct: 834 YDAFVSFSATDEAWVYKE-LVPALEQGSQTTFKLCLHQRDFEPGIDIFENIQNAINTSRK 892
Query: 67 SVIIFSESYPSSRWC-LDELVKILECKKEYAQILIPVFYRVDPS 109
++ + S Y S WC L+ + ++ E+ ++I +F P+
Sbjct: 893 TLCVVSNHYLHSEWCRLEVQLASMKMFYEHKDVIILIFLEEIPN 936
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 33.5 bits (75), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 20 EDTRDNFTSHLYSALSRQNIQTFIDD---QLNRGDEISESLVNAIEASAISVIIFSESYP 76
E + SHL +AL R+ I F+D Q + I ++ A + V+I E
Sbjct: 26 ETVLHSLVSHLSAALRREGISVFVDACGLQETKFFSIKQNQPLTDGARVLVVVISDEVEF 85
Query: 77 SSRWCLDELVKILECKKEYAQILIPVFYRVD 107
W + +K+++ + +++PVFY VD
Sbjct: 86 YDPW-FPKFLKVIQGWQNNGHVVVPVFYGVD 115
>sp|Q704V6|TLR6_BOVIN Toll-like receptor 6 OS=Bos taurus GN=TLR6 PE=2 SV=1
Length = 793
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 10 KYDVFVSFRGEDTRDNFTSHLYSALSRQNIQTFIDDQ-LNRGDEISESLVNAIEASAISV 68
++ F+S+ D+ + L L +++I+ + ++ G I E+++N IE S S+
Sbjct: 641 QFHAFISYSEHDSA-WVKNELIPNLEKEDIRICLHERNFVAGKSIVENIINCIEKSYKSI 699
Query: 69 IIFSESYPSSRWCLDEL 85
+ S ++ S WC EL
Sbjct: 700 FVLSPNFVQSEWCHYEL 716
>sp|Q86DA5|SARM1_CAEEL Sterile alpha and TIR motif-containing protein tir-1
OS=Caenorhabditis elegans GN=tir-1 PE=1 SV=1
Length = 1000
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 8 NKKYDVFVSFRGEDTRDNFTSHLYSALSRQNIQTFID-DQLNRGDEISESLVNAIEASAI 66
+K+ DVF+S+R T + S + L + + FID D+L G + SL+ I+A+
Sbjct: 759 SKQIDVFISYR-RSTGNQLASLIKVLLQLRGYRVFIDVDKLYAG-KFDSSLLKNIQAAKH 816
Query: 67 SVIIFSESYPSS-------RWCLDELVKILECKKEYAQILIPVF 103
+++ + P+S C D + K L+C E+ + +IP+F
Sbjct: 817 FILVLT---PNSLDRLLNDDNCEDWVHKELKCAFEHQKNIIPIF 857
>sp|Q9EPW9|TLR6_MOUSE Toll-like receptor 6 OS=Mus musculus GN=Tlr6 PE=1 SV=2
Length = 795
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 6 RNNKKYDVFVSFRGEDTRDNFTSHLYSALSRQNIQTFIDDQ-LNRGDEISESLVNAIEAS 64
+ N ++ FVS+ D+ + L L + +I+ + ++ G I E+++N IE S
Sbjct: 637 QRNLQFHAFVSYSEHDSA-WVKNELLPNLEKDDIRVCLHERNFVPGKSIVENIINFIEKS 695
Query: 65 AISVIIFSESYPSSRWCLDEL 85
++ + S + S WC EL
Sbjct: 696 YKAIFVLSPHFIQSEWCHYEL 716
>sp|Q05049|MUC1_XENLA Integumentary mucin C.1 (Fragment) OS=Xenopus laevis PE=2 SV=1
Length = 662
Score = 32.3 bits (72), Expect = 1.5, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 71 FSESYPSSRWCLDELVKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSFSKLEERFK 130
F S P ++WC L ++ +CK E +Q + F + R + F S S + F
Sbjct: 334 FDSSIPQTKWCFYTLSQVADCKVEPSQRVDCGFRGITADQCRQKNCCFDSSISGTKWCFY 393
Query: 131 ENSK 134
S+
Sbjct: 394 STSQ 397
>sp|Q9BXR5|TLR10_HUMAN Toll-like receptor 10 OS=Homo sapiens GN=TLR10 PE=1 SV=2
Length = 811
Score = 32.0 bits (71), Expect = 1.9, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 6 RNNKKYDVFVSFRGEDTRDNFTSHLYSALSRQNIQTFI---DDQLNRGDEISESLVNAIE 62
+ N ++ F+S+ D+ + L L +++ I + + G ISE++V+ IE
Sbjct: 629 KRNVRFHAFISYSEHDSL-WVKNELIPNLEKEDGSILICLYESYFDPGKSISENIVSFIE 687
Query: 63 ASAISVIIFSESYPSSRWC 81
S S+ + S ++ + WC
Sbjct: 688 KSYKSIFVLSPNFVQNEWC 706
>sp|B1KDN0|RLMKL_SHEWM Ribosomal RNA large subunit methyltransferase K/L OS=Shewanella
woodyi (strain ATCC 51908 / MS32) GN=rlmL PE=3 SV=1
Length = 711
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 89 LECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSFSKLEERFKENSKKLQTWRK 141
LEC + RVDPS++ N+ G D R K+N K+LQ W K
Sbjct: 368 LECAFNLYTVHATNTRRVDPSNI-NREGDVSDIAVPFVNRVKKNIKQLQKWAK 419
>sp|Q0VF94|NKPD1_MOUSE NTPase KAP family P-loop domain-containing protein 1 OS=Mus
musculus GN=Nkpd1 PE=2 SV=2
Length = 599
Score = 31.6 bits (70), Expect = 3.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 112 RNQTGSFGDSFSKLEERFKENSKKLQTWRKALKEAASLSGFP 153
R Q G + S+L + F +NS++L T KAL+ L G P
Sbjct: 458 RQQAGGAPEGRSRLWDVFCDNSRELHTMTKALQNVLDLDGDP 499
>sp|Q47GH9|SYS_DECAR Serine--tRNA ligase OS=Dechloromonas aromatica (strain RCB) GN=serS
PE=3 SV=1
Length = 427
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 36 RQNIQTFIDDQLNRGDEISESLVNAIEASAISVIIFSESYPSSRWCLDELVKILECKKEY 95
R N+ + RG I S +A+EA ++ ++ + R L + + +L+ K E
Sbjct: 8 RSNLDAVAEGLAKRGKPIDFSEFSALEAERKTLQTRTQDLQAQRNSLSKQIGMLKGKGE- 66
Query: 96 AQILIPVFYRVDPSDVRNQTGSFGDSFSKLEERFKENSKKLQTWRKALKEAASLSGFPSQ 155
D S+V Q GS GD E R E L T A+ A+L P
Sbjct: 67 -----------DASEVMAQVGSIGDELKASEARLAE----LLTQFNAI--LAALPNIPDD 109
Query: 156 SIRINN 161
S+ + +
Sbjct: 110 SVPVGS 115
>sp|A8FW59|RLMKL_SHESH Ribosomal RNA large subunit methyltransferase K/L OS=Shewanella
sediminis (strain HAW-EB3) GN=rlmL PE=3 SV=1
Length = 711
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 89 LECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSFSKLEERFKENSKKLQTWRK 141
LEC + RVDPS + N+ G D R K+N K+LQ W K
Sbjct: 368 LECAFNLYTVHAENTRRVDPSKI-NRDGDVSDIAVPFANRVKKNFKQLQKWAK 419
>sp|A3QDY0|RLMKL_SHELP Ribosomal RNA large subunit methyltransferase K/L OS=Shewanella
loihica (strain ATCC BAA-1088 / PV-4) GN=rlmL PE=3 SV=1
Length = 711
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 105 RVDPSDVRNQTGSFGDSFSKLEERFKENSKKLQTW 139
R+DPS V +Q G + + R K+N K+L W
Sbjct: 384 RLDPSQVLSQGGEVSEVATAFSNRIKKNHKQLSKW 418
>sp|Q58416|Y1010_METJA Uncharacterized ATP-binding protein MJ1010 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1010 PE=1 SV=1
Length = 377
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 114 QTGSFGDSFSKLEERFKENSKKLQTWRKALKEAASLSGFPS-----QSIRINNKSKRILQ 168
+T F L E ++++ K ++ R +K+A SL G P+ + I +K + +
Sbjct: 81 KTFGFRLIIEVLFEEYEDDKKPIEIIRSLIKDAPSLCGIPTPKNTLEEILKKKTTKNVFK 140
Query: 169 YISN 172
YI+N
Sbjct: 141 YITN 144
>sp|B2LT65|TLR2_SHEEP Toll-like receptor 2 OS=Ovis aries GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 14/88 (15%)
Query: 6 RNNKKYDVFVSFRGEDTRDNFTSHLYSALSRQNIQTF---IDDQLNR-----GDEISESL 57
R + YD FVS+ D S+ L Q ++ F L++ G I +++
Sbjct: 636 RRDLCYDAFVSYSERD------SYWVENLMVQELEHFNPPFKLCLHKRDFVPGKWIIDNI 689
Query: 58 VNAIEASAISVIIFSESYPSSRWCLDEL 85
+++IE S ++ + SES+ S WC EL
Sbjct: 690 IDSIEKSRKTIFVLSESFVRSEWCKYEL 717
>sp|Q54NS8|AIFB_DICDI Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum
GN=aifB PE=3 SV=1
Length = 387
Score = 30.4 bits (67), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 24/36 (66%)
Query: 24 DNFTSHLYSALSRQNIQTFIDDQLNRGDEISESLVN 59
D FT+ + A+ ++N++ ++D++ DEI +L+N
Sbjct: 185 DKFTNVVSKAMKKRNVEVILNDRITMPDEIKANLLN 220
>sp|Q05192|FTF1B_DROME Nuclear hormone receptor FTZ-F1 beta OS=Drosophila melanogaster
GN=Hr39 PE=1 SV=3
Length = 808
Score = 30.4 bits (67), Expect = 6.8, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 32 SALSRQNIQTFIDDQLNRGDEISESLVNAIEASAISVIIFSESYPSSRWCLDELVKILEC 91
S +QT I+ LN D + V+ E A+ VI+ +S + L E VK+ EC
Sbjct: 687 SQAKSNGLQTCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTE---LQEAVKVREC 743
Query: 92 KKEYAQIL 99
+++ Q L
Sbjct: 744 QEKALQSL 751
>sp|Q08B20|ODF2L_XENLA Outer dense fiber protein 2-like OS=Xenopus laevis GN=odf2l PE=2
SV=1
Length = 641
Score = 30.4 bits (67), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 27/117 (23%)
Query: 25 NFTSHL--YSALSRQNIQTFIDDQLNRGDEISESLVNAIEASAISVIIFSESYPSS---- 78
NF+ H+ S++ Q+ Q F+ D LNR ++ +N + +S +S + SE++ SS
Sbjct: 27 NFSEHMDERSSVLTQDTQEFLTDLLNR----QKTRLNEL-SSHLSSMAHSETFLSSLKSS 81
Query: 79 -RWCLDELVKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSFSKLEERFKENSK 134
W ++EL C K ++ + ++ +DV +S L E+ K++S+
Sbjct: 82 MHWPVEELT----CDK-----VVTLLTKLKDTDV------AANSVETLIEKLKDSSR 123
>sp|Q01887|RYK_MOUSE Tyrosine-protein kinase RYK OS=Mus musculus GN=Ryk PE=1 SV=2
Length = 594
Score = 30.0 bits (66), Expect = 7.2, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 69 IIFSESYPSSRWCLDEL--VKILECKKEYAQILIPVFYRVDPSDVRNQTGSFGDSFSKLE 126
I S YP+ R ++L V +LE K + I I R+ DV Q G+FG F +
Sbjct: 279 ITSSSGYPTLRIEKNDLRSVTLLEAKAKVKDIAISR-ERITLKDVL-QEGTFGRIFHGIL 336
Query: 127 ERFKENSKKLQTWRKALKEAAS 148
K+ +K+ QT+ K +K+ AS
Sbjct: 337 VDEKDPNKEKQTFVKTVKDQAS 358
>sp|Q77MT3|VG06B_GAHVM Uncharacterized gene 6b protein OS=Gallid herpesvirus 2 (strain
Chicken/Md5/ATCC VR-987) GN=MDV006 PE=4 SV=1
Length = 93
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 101 PVFY-RVDPSDVRNQTGSFGDSFSKLEERFKENSKKLQTWRKALKEAASLSGFPSQ 155
P F+ D + RN T SFGD ER + TWR + L+ P +
Sbjct: 31 PTFHLETDTATTRNGTSSFGDRIRSFCERARSLISNFVTWRSRNESCEVLAEIPQE 86
>sp|Q9DGV6|VG06A_GAHVM Uncharacterized gene 6a protein OS=Gallid herpesvirus 2 (strain
Chicken/Md5/ATCC VR-987) GN=MDV006 PE=4 SV=1
Length = 85
Score = 30.0 bits (66), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 101 PVFY-RVDPSDVRNQTGSFGDSFSKLEERFKENSKKLQTWRKALKEAASLSGFPSQ 155
P F+ D + RN T SFGD ER + TWR + L+ P +
Sbjct: 23 PTFHLETDTATTRNGTSSFGDRIRSFCERARSLISNFVTWRSRNESCEVLAEIPQE 78
>sp|Q19317|NBEA_CAEEL Putative neurobeachin homolog OS=Caenorhabditis elegans GN=sel-2
PE=2 SV=3
Length = 2507
Score = 30.0 bits (66), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 28 SHLYSALSRQNIQTFIDDQLNRGDEISESLVNAIEASAISVIIFSESYPSSRWC 81
+H YS R +I+ FID QL E+S + +A S+ + ++ +S +C
Sbjct: 404 AHCYSRWGRSDIKCFIDGQLAETIELSWVVTSATNWDRCSIGVSADGTANSAFC 457
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,033,907
Number of Sequences: 539616
Number of extensions: 2222631
Number of successful extensions: 7465
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 7432
Number of HSP's gapped (non-prelim): 57
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)