Query 042468
Match_columns 346
No_of_seqs 312 out of 1852
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 10:56:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042468.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042468hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 1.7E-86 5.7E-91 622.2 33.3 306 29-345 56-361 (363)
2 3qj3_A Cathepsin L-like protei 100.0 1.4E-85 4.8E-90 612.9 32.0 307 28-346 11-331 (331)
3 1pci_A Procaricain; zymogen, h 100.0 2.9E-85 9.9E-90 609.0 32.0 307 31-346 14-321 (322)
4 3qt4_A Cathepsin-L-like midgut 100.0 2.9E-85 1E-89 609.2 29.0 307 30-346 18-329 (329)
5 2c0y_A Procathepsin S; proenzy 100.0 8.9E-85 3E-89 604.5 28.3 305 32-346 5-315 (315)
6 1by8_A Protein (procathepsin K 100.0 2.4E-84 8.2E-89 601.3 29.1 303 33-346 5-314 (314)
7 1cs8_A Human procathepsin L; p 100.0 5.8E-84 2E-88 599.3 27.9 301 34-346 7-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 2.3E-83 8E-88 593.7 27.3 298 37-346 3-306 (310)
9 1xkg_A DER P I, major mite fec 100.0 1.2E-78 4E-83 561.4 24.7 284 38-346 7-302 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 1.7E-71 6E-76 533.4 23.9 278 54-344 135-433 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 4.6E-70 1.6E-74 507.1 19.0 274 57-345 2-311 (325)
12 3p5u_A Actinidin; SAD, cystein 100.0 6.3E-68 2.2E-72 469.3 22.7 217 128-346 1-217 (220)
13 1cqd_A Protein (protease II); 100.0 2.5E-67 8.7E-72 465.3 24.8 216 127-346 2-217 (221)
14 1ppo_A Protease omega; hydrola 100.0 2.6E-67 8.8E-72 463.7 23.9 215 128-346 1-215 (216)
15 1iwd_A Ervatamin B; cysteine p 100.0 4.6E-67 1.6E-71 461.6 24.4 214 128-346 1-214 (215)
16 1yal_A Chymopapain; hydrolase, 100.0 6E-67 2E-71 462.0 23.9 215 128-346 1-215 (218)
17 1s4v_A Cysteine endopeptidase; 100.0 8.6E-67 2.9E-71 464.2 23.0 219 127-346 1-219 (229)
18 3u8e_A Papain-like cysteine pr 100.0 5.9E-67 2E-71 463.5 20.7 214 128-346 1-219 (222)
19 2cio_A Papain; hydrolase/inhib 100.0 3.3E-66 1.1E-70 455.4 24.9 211 128-346 1-211 (212)
20 2fo5_A Cysteine proteinase EP- 100.0 6.6E-67 2.3E-71 471.9 21.0 219 127-346 3-224 (262)
21 3ovx_A Cathepsin S; hydrolase, 100.0 1.1E-66 3.7E-71 461.0 20.7 214 128-346 2-218 (218)
22 3kwz_A Cathepsin K; enzyme inh 100.0 2.2E-66 7.4E-71 458.1 22.5 212 128-346 1-215 (215)
23 2bdz_A Mexicain; cysteine prot 100.0 5.8E-66 2E-70 454.2 23.5 211 128-346 1-211 (214)
24 3ioq_A CMS1MS2; caricaceae, cy 100.0 3.4E-66 1.2E-70 455.7 22.1 211 128-346 1-211 (213)
25 2xu3_A Cathepsin L1; hydrolase 100.0 4.7E-66 1.6E-70 457.3 22.9 214 128-346 1-220 (220)
26 3pbh_A Procathepsin B; thiol p 100.0 3.1E-66 1.1E-70 480.5 21.5 261 66-344 11-312 (317)
27 1o0e_A Ervatamin C; plant cyst 100.0 1.2E-65 4.1E-70 450.3 23.9 207 128-346 1-207 (208)
28 2b1m_A SPE31; papain-like, sug 100.0 2.6E-65 8.8E-70 458.9 24.1 214 127-346 1-224 (246)
29 2oul_A Falcipain 2; cysteine p 100.0 1.4E-65 4.8E-70 459.7 22.3 214 127-346 17-240 (241)
30 3f75_A Toxopain-2, cathepsin L 100.0 7.9E-66 2.7E-70 457.4 18.5 218 127-346 6-224 (224)
31 3bwk_A Cysteine protease falci 100.0 2.4E-65 8.2E-70 458.8 21.3 214 127-346 19-242 (243)
32 8pch_A Cathepsin H; hydrolase, 100.0 2.1E-65 7.3E-70 453.3 19.7 211 128-345 1-217 (220)
33 3i06_A Cruzipain; autocatalyti 100.0 1.7E-64 5.9E-69 445.5 23.3 208 128-346 1-214 (215)
34 1m6d_A Cathepsin F, catsf; pap 100.0 1.5E-64 5.1E-69 445.6 22.0 208 128-346 1-213 (214)
35 3f5v_A DER P 1 allergen; aller 100.0 2.7E-64 9.3E-69 446.7 19.1 209 127-346 9-222 (222)
36 3cbj_A Cathepsin B; cathepsin 100.0 1E-59 3.4E-64 428.0 19.9 211 127-345 6-256 (266)
37 1deu_A Procathepsin X; cystein 100.0 1.2E-59 4.2E-64 428.9 19.1 210 127-345 35-274 (277)
38 3qsd_A Cathepsin B-like peptid 100.0 4.3E-59 1.5E-63 421.2 19.6 210 127-345 2-252 (254)
39 2wbf_X Serine-repeat antigen p 100.0 1.3E-54 4.5E-59 394.6 21.0 210 131-345 10-260 (265)
40 3ois_A Cysteine protease; alph 100.0 6.2E-53 2.1E-57 387.9 15.3 235 81-328 13-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 7.9E-42 2.7E-46 325.7 15.2 198 127-327 47-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 7.4E-41 2.5E-45 319.3 17.2 207 128-345 53-423 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 8.2E-36 2.8E-40 278.7 19.7 183 139-327 21-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 9.3E-19 3.2E-23 134.5 9.6 76 29-106 15-90 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 6.3E-18 2.2E-22 124.2 6.1 69 36-106 7-77 (80)
46 1pxv_A Cysteine protease; hydr 96.9 0.023 8E-07 46.4 12.8 129 144-327 25-162 (183)
47 1x9y_A Cysteine proteinase; ha 96.9 0.027 9.3E-07 50.9 14.3 129 144-327 201-338 (367)
48 1cv8_A Staphopain; cysteine pr 96.8 0.033 1.1E-06 45.4 12.9 121 144-314 16-145 (174)
49 3erv_A Putative C39-like pepti 87.2 2.5 8.4E-05 36.6 8.5 54 242-298 126-187 (236)
50 3bb7_A Interpain A; cysteine p 66.8 12 0.00041 33.8 6.7 59 249-326 239-298 (321)
51 1dki_A Pyrogenic exotoxin B zy 66.0 14 0.00049 34.0 7.2 54 249-326 290-344 (371)
52 4d8b_A Streptopain; papain fol 57.5 16 0.00055 31.9 5.6 53 248-326 171-226 (261)
53 3arc_L Photosystem II reaction 34.8 39 0.0013 19.6 2.8 18 3-20 16-33 (37)
54 2r9f_A Calpain-1 catalytic sub 25.5 59 0.002 29.4 4.1 38 288-325 246-312 (339)
55 1th5_A NIFU1; iron-sulfur clus 23.8 25 0.00085 24.3 0.9 26 140-167 37-62 (74)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=1.7e-86 Score=622.17 Aligned_cols=306 Identities=42% Similarity=0.806 Sum_probs=268.9
Q ss_pred cCChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccCCCCCeEEecccCCCCChHHHhcccCCCcCCC
Q 042468 29 TLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKRRL 108 (346)
Q Consensus 29 ~~~~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~ 108 (346)
-.+++.+.++|++|+++|+|+|.+.+|+.+|++||++|+++|++||+ .+.+|++|+|+|+|||.+||++++++...+.
T Consensus 56 l~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~--~~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~ 133 (363)
T 3tnx_A 56 LTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNK--KNNSYWLGLNVFADMSNDEFKEKYTGSIAGN 133 (363)
T ss_dssp SSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEECSCTTTTSCHHHHHHHHSCSSCSC
T ss_pred hcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHc--CCCCeEEeccccccCCHHHHHHHhccccccc
Confidence 35578899999999999999999999999999999999999999998 5789999999999999999999888765432
Q ss_pred CcccCCCCcccccccCCCCCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCC
Q 042468 109 PSVRSSETTDVSFRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGE 188 (346)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~ 188 (346)
...... ...........+||++||||++|.||||||||.||||||||+++++|+++++++++.+.||+|+|+||...
T Consensus 134 ~~~~~~-~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~-- 210 (363)
T 3tnx_A 134 YTTTEL-SYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRR-- 210 (363)
T ss_dssp CCCSSS-SSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--
T ss_pred cccccc-ccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCC--
Confidence 111100 00111111223899999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCCCChHHHHHHHHHhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccC
Q 042468 189 DQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASG 268 (346)
Q Consensus 189 ~~gc~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~ 268 (346)
+.||+||.+..|+.|+.+. |+++|++|||.+.++.|..........++.++..++..++.+++.+|++|||+|++++..
T Consensus 211 ~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a~~ 289 (363)
T 3tnx_A 211 SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAG 289 (363)
T ss_dssp SCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECCCS
T ss_pred CCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEecc
Confidence 7899999999999999855 999999999999888777654455567788888888888999999999999999999876
Q ss_pred ccccccCCCeEeCCCCCCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 042468 269 SDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPT 345 (346)
Q Consensus 269 ~~f~~y~~gi~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 345 (346)
++|++|++|||..+|+...+|||+|||||+ +|||||||||++|||+|||||+|+.++..|+|||++.++||+
T Consensus 290 ~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~-----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPi 361 (363)
T 3tnx_A 290 KDFQLYRGGIFVGPCGNKVDHAVAAVGYGP-----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 361 (363)
T ss_dssp HHHHTEEEEEECCCCCSCCCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEE
T ss_pred hhhhCCCCCEECCCCCCCCCeEEEEEEcCC-----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeecc
Confidence 789999999999998888999999999985 499999999999999999999999988779999999999997
No 2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=1.4e-85 Score=612.86 Aligned_cols=307 Identities=39% Similarity=0.737 Sum_probs=270.1
Q ss_pred ccCChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccc--CCCCCeEEecccCCCCChHHHhcccCCCc
Q 042468 28 RTLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNK--ARNKPYKLGINEFADQTNEEFRAPRNGYK 105 (346)
Q Consensus 28 ~~~~~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~--~~~~s~~~g~N~FsD~t~eEf~~~~~~~~ 105 (346)
+...+..++.+|++||++|+|+|.+.+|+..|+.||++|+++|++||++ .++.+|++|+|+|+|||.+||++++++..
T Consensus 11 ~~~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~ 90 (331)
T 3qj3_A 11 SALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLI 90 (331)
T ss_dssp --CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccc
Confidence 3466788999999999999999999889999999999999999999984 25789999999999999999999888765
Q ss_pred CCCCcccCCCCccccccc-------CCCCCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCC--CccCC
Q 042468 106 RRLPSVRSSETTDVSFRY-------ENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRK--LTSLS 176 (346)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~-------~~~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~--~~~lS 176 (346)
.+..... . ...+.. ...+||++||||++|+||||||||.||||||||+++++|++++++++. .++||
T Consensus 91 ~~~~~~~---~-~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LS 166 (331)
T 3qj3_A 91 MPADLHK---N-GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVS 166 (331)
T ss_dssp CCSSTTT---T-CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBC
T ss_pred ccccccc---c-CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcC
Confidence 4321110 0 011110 123799999999999999999999999999999999999999999998 89999
Q ss_pred hHHHhhhcCCCCCCCCCCCChHHHHHHHHHhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH
Q 042468 177 EQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA 256 (346)
Q Consensus 177 ~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~ 256 (346)
+|+|+||+.. +.||+||++..|++|+.+++|+++|++|||.+.++.|... .....+++.+|..++..++++|+++|+
T Consensus 167 eQ~LvdC~~~--~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~e~~lk~al~ 243 (331)
T 3qj3_A 167 EQQLVDCVPN--ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYD-PNQVAARLSGYVYLSGPDENMLADMVA 243 (331)
T ss_dssp HHHHHHHCTT--SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-TTSEEECCSEEEEESSCCHHHHHHHHH
T ss_pred HHHHhhhccC--CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCC-cccceeEeeEEEEeCCCCHHHHHHHHH
Confidence 9999999875 7899999999999999988899999999999999999876 345667899999998778999999999
Q ss_pred -cCCeEEEEEccCccccccCCCeEeCC-CC-CCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCC
Q 042468 257 -NQPVSVAIDASGSDFQFYSSGVFTGQ-CG-TELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEG 333 (346)
Q Consensus 257 -~gPv~v~~~~~~~~f~~y~~gi~~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~ 333 (346)
+|||+|+|++.. +|++|++|||..+ |+ ..++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |
T Consensus 244 ~~GPV~v~i~a~~-~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n 318 (331)
T 3qj3_A 244 TKGPVAVAFDADD-PFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-NGQDYWLVKNSWGDGWGLDGYFKIARNAN---N 318 (331)
T ss_dssp HHCCEEEEECCCT-TGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---S
T ss_pred hCCCEEEEEEccc-ccccccCceEeCCCCCCCcCCEEEEEEEEecc-CCceEEEEEcCCCCCcCCCCEEEEEcCCC---C
Confidence 599999999984 5999999999987 75 578999999999987 79999999999999999999999999974 4
Q ss_pred CcccccccceeeC
Q 042468 334 LCGIAMQASYPTA 346 (346)
Q Consensus 334 ~Cgi~~~~~~p~~ 346 (346)
.|||++.++||+|
T Consensus 319 ~CgI~~~~~~p~v 331 (331)
T 3qj3_A 319 HCGIAGVASVPTL 331 (331)
T ss_dssp GGGTTTSCEEEEC
T ss_pred ccCcCCceeeeeC
Confidence 6999999999986
No 3
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=2.9e-85 Score=609.02 Aligned_cols=307 Identities=47% Similarity=0.867 Sum_probs=269.2
Q ss_pred ChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccCCCCCeEEecccCCCCChHHHhcccCCCcCCCCc
Q 042468 31 NDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKRRLPS 110 (346)
Q Consensus 31 ~~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~ 110 (346)
++..+..+|++||++|+|+|.+.+|+..|+.+|++|+++|++||+ .+.+|++|+|+|+|||.+||++++++...+.+.
T Consensus 14 ~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~--~~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~ 91 (322)
T 1pci_A 14 STERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNK--KNNSYWLGLNEFADLSNDEFNEKYVGSLIDATI 91 (322)
T ss_dssp HHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHT--TCCSEEECSCTTTTSCHHHHHHHHCCCBCCCSS
T ss_pred chHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhc--cCCceEEecCccccCCHHHHHHHhcCCCCcccc
Confidence 467788899999999999999888999999999999999999998 367999999999999999999988776542211
Q ss_pred ccCCCCcccccccCC-CCCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCC
Q 042468 111 VRSSETTDVSFRYEN-ASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGED 189 (346)
Q Consensus 111 ~~~~~~~~~~~~~~~-~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~ 189 (346)
.. .....+.... .+||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||+. .+
T Consensus 92 ~~---~~~~~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~--~~ 166 (322)
T 1pci_A 92 EQ---SYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RS 166 (322)
T ss_dssp CC---CCSEECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT--TS
T ss_pred cc---ccccccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC--CC
Confidence 00 0011111122 279999999999999999999999999999999999999999999999999999999986 47
Q ss_pred CCCCCCChHHHHHHHHHhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCc
Q 042468 190 QGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGS 269 (346)
Q Consensus 190 ~gc~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~ 269 (346)
.||+||++..|++|+.++ |+++|++|||.+..+.|.........++|.+|..++..++++|+++|++|||+|+|++..+
T Consensus 167 ~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~~~ 245 (322)
T 1pci_A 167 HGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGR 245 (322)
T ss_dssp CGGGCBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTTCH
T ss_pred CCCCCCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEecccc
Confidence 899999999999999877 8999999999999999987633345678999999987789999999999999999999756
Q ss_pred cccccCCCeEeCCCCCCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 270 DFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 270 ~f~~y~~gi~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+|++|++|||.++|+..++|||+|||||++ +|++|||||||||++||++|||||+|+.+...|.|||++.++||++
T Consensus 246 ~f~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~ 321 (322)
T 1pci_A 246 PFQLYKGGIFEGPCGTKVDGAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321 (322)
T ss_dssp HHHTEEEEEECCSCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECC
T ss_pred cccccCCeEeCCCCCCCCCEEEEEEEEecc-CCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEe
Confidence 899999999988888778999999999988 6999999999999999999999999997433467999999999985
No 4
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=2.9e-85 Score=609.18 Aligned_cols=307 Identities=42% Similarity=0.767 Sum_probs=265.7
Q ss_pred CChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccc--CCCCCeEEecccCCCCChHHHhcccCCCcCC
Q 042468 30 LNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNK--ARNKPYKLGINEFADQTNEEFRAPRNGYKRR 107 (346)
Q Consensus 30 ~~~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~--~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~ 107 (346)
+++..++.+|++||++|+|+|.+.+|+..|+.||++|+++|++||++ .++.+|++|+|+|+|||.+||++ +++.+++
T Consensus 18 ~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~ 96 (329)
T 3qt4_A 18 LPKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKA 96 (329)
T ss_dssp --CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCC
T ss_pred cCHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCccc
Confidence 44678899999999999999999889999999999999999999984 25789999999999999999998 6654432
Q ss_pred CCcccCCCCcccccccCCCCCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCC
Q 042468 108 LPSVRSSETTDVSFRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSG 187 (346)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~ 187 (346)
...... ......+.....+||++||||++ +||||||||.||||||||+++++|+++++++++.++||||+|+||+...
T Consensus 97 ~~~~~~-~~~~~~~~~~~~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~ 174 (329)
T 3qt4_A 97 QKPKHP-ENLRMPYVSSKKPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSY 174 (329)
T ss_dssp C-------CCEEECCCCCSCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGG
T ss_pred cccccc-ccccccccCCccCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhcccc
Confidence 111000 00011111112379999999999 9999999999999999999999999999999999999999999998755
Q ss_pred CCCCCCCCChHHHHHHHHHhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEc
Q 042468 188 EDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDA 266 (346)
Q Consensus 188 ~~~gc~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~ 266 (346)
++.||+||++..|++|+.++ |+++|++|||.+.++.|... .....+++.+|..++..++++|+++|+ +|||+|+|++
T Consensus 175 g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a 252 (329)
T 3qt4_A 175 GNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFD-SSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDA 252 (329)
T ss_dssp TCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCC-GGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEECC
T ss_pred CCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCC-cccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEec
Confidence 67899999999999999987 99999999999999999876 344567899999998788999999999 5999999999
Q ss_pred cCccccccCCCeEeCC-CC-CCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCccccccccee
Q 042468 267 SGSDFQFYSSGVFTGQ-CG-TELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYP 344 (346)
Q Consensus 267 ~~~~f~~y~~gi~~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p 344 (346)
. .+|++|++|||..+ |. ..++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||++.++||
T Consensus 253 ~-~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~yp 327 (329)
T 3qt4_A 253 T-DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD-NGQDYWILKNSWGSGWGESGYWRQVRNYG---NNCGIATAASYP 327 (329)
T ss_dssp C-GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTTTCEEE
T ss_pred C-hhhhhccCceeecCCCCCCcCCEEEEEEEEEee-CCccEEEEEeCCCCcccCCcEEEEEeCCC---CccCCCCceeEe
Confidence 8 59999999999987 75 678999999999987 69999999999999999999999999974 469999999999
Q ss_pred eC
Q 042468 345 TA 346 (346)
Q Consensus 345 ~~ 346 (346)
+|
T Consensus 328 ~v 329 (329)
T 3qt4_A 328 AL 329 (329)
T ss_dssp EC
T ss_pred eC
Confidence 86
No 5
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=8.9e-85 Score=604.47 Aligned_cols=305 Identities=42% Similarity=0.800 Sum_probs=265.7
Q ss_pred hhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccC--CCCCeEEecccCCCCChHHHhcccCCCcCCCC
Q 042468 32 DATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKA--RNKPYKLGINEFADQTNEEFRAPRNGYKRRLP 109 (346)
Q Consensus 32 ~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~--~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~ 109 (346)
+..++.+|++||++|+|+|.+.+|+..|+.+|++|+++|++||++. +..+|++|+|+|+|||.+||++++++...+..
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 3567889999999999999988899999999999999999999832 45799999999999999999887777554221
Q ss_pred cccCCCCcccccccC-CCCCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhc-CCC
Q 042468 110 SVRSSETTDVSFRYE-NASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCD-TSG 187 (346)
Q Consensus 110 ~~~~~~~~~~~~~~~-~~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~-~~~ 187 (346)
... ...+... ..+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+ ..+
T Consensus 85 ~~~-----~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~ 159 (315)
T 2c0y_A 85 WQR-----NITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKY 159 (315)
T ss_dssp GGS-----CBCC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGG
T ss_pred ccC-----CccccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhccccc
Confidence 110 0111111 227999999999999999999999999999999999999999999999999999999998 444
Q ss_pred CCCCCCCCChHHHHHHHHHhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEc
Q 042468 188 EDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDA 266 (346)
Q Consensus 188 ~~~gc~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~ 266 (346)
.+.||+||++..|++|+.++.|+++|++|||.+..+.|.... ....++|.+|..++..++++|+++|+ +|||+|+|++
T Consensus 160 ~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~ 238 (315)
T 2c0y_A 160 GNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDS-KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDA 238 (315)
T ss_dssp TCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECC
T ss_pred CCCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCC-cccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEec
Confidence 578999999999999998777999999999999999998652 33567889999998778999999999 5999999999
Q ss_pred cCccccccCCCeEeCC-CCCCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 042468 267 SGSDFQFYSSGVFTGQ-CGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPT 345 (346)
Q Consensus 267 ~~~~f~~y~~gi~~~~-~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 345 (346)
..++|++|++|||..+ |+..++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||++.++||+
T Consensus 239 ~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~ 314 (315)
T 2c0y_A 239 RHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPE 314 (315)
T ss_dssp CSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEE
T ss_pred CchhhhccCCCcccCCCCCCcCCEEEEEEEEeec-CCCcEEEEEcCCCCCcCCCcEEEEEcCCC---CccCcCceeEEee
Confidence 8668999999999988 88888999999999988 79999999999999999999999999863 4699999999998
Q ss_pred C
Q 042468 346 A 346 (346)
Q Consensus 346 ~ 346 (346)
+
T Consensus 315 ~ 315 (315)
T 2c0y_A 315 I 315 (315)
T ss_dssp C
T ss_pred C
Confidence 6
No 6
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=2.4e-84 Score=601.31 Aligned_cols=303 Identities=44% Similarity=0.792 Sum_probs=264.9
Q ss_pred hHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccC--CCCCeEEecccCCCCChHHHhcccCCCcCCCCc
Q 042468 33 ATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKA--RNKPYKLGINEFADQTNEEFRAPRNGYKRRLPS 110 (346)
Q Consensus 33 ~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~--~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~ 110 (346)
..++.+|++||++|+|+|.+.+|+..|+.+|++|+++|++||++. +..+|++|+|+|+|||.+||++++++...+...
T Consensus 5 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~ 84 (314)
T 1by8_A 5 EILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSH 84 (314)
T ss_dssp CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCC
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCccc
Confidence 467789999999999999998899999999999999999999832 457999999999999999998877776542211
Q ss_pred ccCCCCcccccccC-CCC-CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCC
Q 042468 111 VRSSETTDVSFRYE-NAS-VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGE 188 (346)
Q Consensus 111 ~~~~~~~~~~~~~~-~~~-lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~ 188 (346)
.. . ...+... ..+ ||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+. .
T Consensus 85 ~~---~-~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~--~ 158 (314)
T 1by8_A 85 SR---S-NDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--E 158 (314)
T ss_dssp CC---S-SSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT--T
T ss_pred cc---C-CccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--C
Confidence 10 0 0111111 124 9999999999999999999999999999999999999999999999999999999986 4
Q ss_pred CCCCCCCChHHHHHHHHHhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEcc
Q 042468 189 DQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDAS 267 (346)
Q Consensus 189 ~~gc~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~ 267 (346)
+.||+||++..|++|+.++.|+++|++|||.+..+.|.... ....+++.+|..++..++++|+++|+ +|||+|+|++.
T Consensus 159 ~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~ 237 (314)
T 1by8_A 159 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNP-TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 237 (314)
T ss_dssp SCGGGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCG-GGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCC
T ss_pred CCCCcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCC-ccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeC
Confidence 78999999999999998777999999999999989998652 33567889999998778999999999 59999999998
Q ss_pred CccccccCCCeEeCC-CCC-CCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 042468 268 GSDFQFYSSGVFTGQ-CGT-ELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPT 345 (346)
Q Consensus 268 ~~~f~~y~~gi~~~~-~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 345 (346)
.++|++|++|||..+ |+. .++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||++.++||+
T Consensus 238 ~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~ 313 (314)
T 1by8_A 238 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPK 313 (314)
T ss_dssp SHHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBTTTSTBTTEEEECCSSS---CGGGTTSSCEEEC
T ss_pred hHHhhhccCceecCCCCCCCCCCeEEEEEEEecc-CCceEEEEEcCCCCCcCcCCEEEEEcCCC---CcCCccCeeEEee
Confidence 668999999999988 875 78999999999988 79999999999999999999999999863 4699999999998
Q ss_pred C
Q 042468 346 A 346 (346)
Q Consensus 346 ~ 346 (346)
+
T Consensus 314 ~ 314 (314)
T 1by8_A 314 M 314 (314)
T ss_dssp C
T ss_pred C
Confidence 6
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=5.8e-84 Score=599.26 Aligned_cols=301 Identities=46% Similarity=0.849 Sum_probs=262.7
Q ss_pred HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccC--CCCCeEEecccCCCCChHHHhcccCCCcCCCCcc
Q 042468 34 TMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKA--RNKPYKLGINEFADQTNEEFRAPRNGYKRRLPSV 111 (346)
Q Consensus 34 ~~~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~--~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~ 111 (346)
.++.+|++||++|+|+| +.+|+..|+.+|++|+++|++||++. ++.+|++|+|+|+|||.+||++++++..++....
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~ 85 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRK 85 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCSC
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCcccc
Confidence 57789999999999999 77799999999999999999999832 4689999999999999999998777754321110
Q ss_pred cCCCCcccccccC-CCCCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCC
Q 042468 112 RSSETTDVSFRYE-NASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQ 190 (346)
Q Consensus 112 ~~~~~~~~~~~~~-~~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~ 190 (346)
...+... ..+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+...++.
T Consensus 86 ------~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~ 159 (316)
T 1cs8_A 86 ------GKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 159 (316)
T ss_dssp ------CEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCC
T ss_pred ------CccccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCC
Confidence 0111111 227999999999999999999999999999999999999999999999999999999998654578
Q ss_pred CCCCCChHHHHHHHHHhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCc
Q 042468 191 GCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGS 269 (346)
Q Consensus 191 gc~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~ 269 (346)
||+||++..|++|+.++.|+++|++|||.+..+.|... .....+++.+|..++. ++++|+++|+ +|||+|+|++..+
T Consensus 160 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~ 237 (316)
T 1cs8_A 160 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHE 237 (316)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSH
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCC-CccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCCh
Confidence 99999999999999867799999999999999999865 2345678999999986 8999999999 5999999999856
Q ss_pred cccccCCCeEeCC-CCC-CCCeEEEEEEee---ccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCccccccccee
Q 042468 270 DFQFYSSGVFTGQ-CGT-ELDHGVTAVGYG---TADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYP 344 (346)
Q Consensus 270 ~f~~y~~gi~~~~-~~~-~~~Hav~iVGyg---~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p 344 (346)
+|++|++|||..+ |+. .++|||+||||| ++++|++|||||||||++||++|||||+|+.+ |.|||++.++||
T Consensus 238 ~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p 314 (316)
T 1cs8_A 238 SFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYP 314 (316)
T ss_dssp HHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEE
T ss_pred hhccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCC---CccCccceeeEe
Confidence 8999999999987 875 789999999999 55478999999999999999999999999974 469999999999
Q ss_pred eC
Q 042468 345 TA 346 (346)
Q Consensus 345 ~~ 346 (346)
++
T Consensus 315 ~~ 316 (316)
T 1cs8_A 315 TV 316 (316)
T ss_dssp CC
T ss_pred eC
Confidence 86
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=2.3e-83 Score=593.67 Aligned_cols=298 Identities=42% Similarity=0.792 Sum_probs=258.0
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccC--CCCCeEEecccCCCCChHHHhcccCC-CcCCCCcccC
Q 042468 37 ERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKA--RNKPYKLGINEFADQTNEEFRAPRNG-YKRRLPSVRS 113 (346)
Q Consensus 37 ~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~--~~~s~~~g~N~FsD~t~eEf~~~~~~-~~~~~~~~~~ 113 (346)
.+|++||++|+|+|.+.+|+..| .+|++|+++|++||++. ++.+|++|+|+|+|||.+||++++++ ...+....
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~-- 79 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDIL-- 79 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGS--
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccc--
Confidence 58999999999999988899999 99999999999999832 36799999999999999999987776 44321110
Q ss_pred CCCcccccccCCCCCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCC
Q 042468 114 SETTDVSFRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCE 193 (346)
Q Consensus 114 ~~~~~~~~~~~~~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~ 193 (346)
.....+.....+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+...++.||+
T Consensus 80 --~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~ 157 (310)
T 2o6x_A 80 --SHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCG 157 (310)
T ss_dssp --CSSEECCC----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGG
T ss_pred --ccCCccccccCCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCC
Confidence 000111111226999999999999999999999999999999999999999999999999999999998644578999
Q ss_pred CCChHHHHHHHHHhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCcccc
Q 042468 194 GGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGSDFQ 272 (346)
Q Consensus 194 GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~~f~ 272 (346)
||++..|++|+. +.|+++|++|||.+..+.|... .....+++.+|..++..++++|+++|+ +|||+|+|++. ++|+
T Consensus 158 GG~~~~a~~yi~-~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f~ 234 (310)
T 2o6x_A 158 GGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYN-KQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDFM 234 (310)
T ss_dssp CCCHHHHHHHHT-TSCBCBTTTSCCCSSCCCCCCC-GGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHHH
T ss_pred CCCHHHHHHHHH-HCCcCchhcCCCCCCCCCccCC-CCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhhh
Confidence 999999999998 6799999999999988999865 334568899999998778999999999 59999999998 6899
Q ss_pred ccCCCeEeCC-CC-CCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 273 FYSSGVFTGQ-CG-TELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 273 ~y~~gi~~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+|++|||..+ |+ ..++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||++.++||++
T Consensus 235 ~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 235 MYRSGIYQSQTCSPLRVNHAVLAVGYGTQ-GGTDYWIVKNSWGLSWGERGYIRMVRNRG---NMCGIASLASLPMV 306 (310)
T ss_dssp TEEEEEECCSSCCTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSEEEEEE
T ss_pred hCCCceecCCCCCCCCCCEEEEEEEEecc-CCceEEEEEeCCCCccCCCcEEEEEcCCC---CcCCccceeeEEEe
Confidence 9999999876 87 478999999999988 79999999999999999999999999864 46999999999974
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=1.2e-78 Score=561.43 Aligned_cols=284 Identities=32% Similarity=0.560 Sum_probs=245.8
Q ss_pred HHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccCCCCCeEEecccCCCCChHHHhcccCCCcCCCCcccCCCCc
Q 042468 38 RHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKRRLPSVRSSETT 117 (346)
Q Consensus 38 ~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~ 117 (346)
+|++||++|+|+|.+.+|+..|+.+|++|+++|++ |+ + |+|+|+|||.+||++++++...+..... .
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~--~------g~N~F~Dlt~eEf~~~~~~~~~~~~~~~----~ 73 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG--G------AINHLSDLSLDEFKNRFLMSAEAFEHLK----T 73 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC--C------CCCTTTTSCHHHHHHHHSBCHHHHHHHH----H
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc--C------CCCcccCCCHHHHHHHhcCCCCcccccc----C
Confidence 59999999999999988999999999999999999 85 2 9999999999999986666332110000 0
Q ss_pred ccccccC------CCCCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCC
Q 042468 118 DVSFRYE------NASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQG 191 (346)
Q Consensus 118 ~~~~~~~------~~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~g 191 (346)
...+... ..+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. ..|
T Consensus 74 ~~~~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~---~~G 150 (312)
T 1xkg_A 74 QFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS---QHG 150 (312)
T ss_dssp HHC-----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SST
T ss_pred CcccccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC---CCC
Confidence 0011100 1279999999999999999999999999999999999999999999999999999999982 389
Q ss_pred CCCCChHHHHHHHHHhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHc--CCeEEEEEccCc
Q 042468 192 CEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVAN--QPVSVAIDASGS 269 (346)
Q Consensus 192 c~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~--gPv~v~~~~~~~ 269 (346)
|+||++..|++|+.+ .|+++|++|||.+..+.|. . .....+++.+|..++..++++|+++|+. |||+|+|++...
T Consensus 151 C~GG~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~C~-~-~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~ 227 (312)
T 1xkg_A 151 CHGDTIPRGIEYIQH-NGVVQESYYRYVAREQSCR-R-PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDL 227 (312)
T ss_dssp TBCCCHHHHHHHHHH-HCEEBGGGSCCCSSCCCCC-C-CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCH
T ss_pred CCCCCHHHHHHHHHH-cCCCccccCCccCCCCCCC-C-CCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccc
Confidence 999999999999987 5999999999999999998 4 3445788999999987789999999985 999999999843
Q ss_pred -cccccCCCeEeCC-CC-C-CCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 042468 270 -DFQFYSSGVFTGQ-CG-T-ELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPT 345 (346)
Q Consensus 270 -~f~~y~~gi~~~~-~~-~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 345 (346)
+|++|++|||..+ |+ . . +|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++||+
T Consensus 228 ~~f~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~----n~CgI~~~~~~~~ 301 (312)
T 1xkg_A 228 DAFRHYDGRTIIQRDNGYQPN-YHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVI 301 (312)
T ss_dssp HHHHTCCSSSCBCCCCSSCCE-EEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTCCEEEE
T ss_pred ccccccCCcEEcCCCCCCCcC-ceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCC----CcccccceeEEee
Confidence 8999999999986 76 4 6 999999999987 7999999999999999999999999984 4699999999998
Q ss_pred C
Q 042468 346 A 346 (346)
Q Consensus 346 ~ 346 (346)
+
T Consensus 302 ~ 302 (312)
T 1xkg_A 302 L 302 (312)
T ss_dssp C
T ss_pred c
Confidence 4
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.7e-71 Score=533.44 Aligned_cols=278 Identities=31% Similarity=0.557 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCeEEe-cccCCCCChHHHhcccCCCcCCCCcccCCCCcccccccC-CCCCCce
Q 042468 54 AEKEMRFKIFKENVEYIASFNNKARNKPYKLG-INEFADQTNEEFRAPRNGYKRRLPSVRSSETTDVSFRYE-NASVPAS 131 (346)
Q Consensus 54 ~e~~~R~~~f~~n~~~I~~~N~~~~~~s~~~g-~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lP~~ 131 (346)
.|+..|++||++|+++|++||+ .+.+|+++ +|+|+|||.+||++++++...+.+.... ......... ..+||++
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~--~~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~lP~s 210 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINA--IQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKP--APLTAEIQQKILFLPTS 210 (441)
T ss_dssp ---------------------------------------------------------------------------CCCSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHc--cCCceEeecccccccCCHHHHHHHhCCCccccccccc--CccccccccccccCCCC
Confidence 4668999999999999999998 46789998 8999999999999987765432111100 000001011 1279999
Q ss_pred eeccCCC---CCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCc--cCChHHHhhhcCCCCCCCCCCCChHHH-HHHHH
Q 042468 132 IDWRKKG---AVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLT--SLSEQELVDCDTSGEDQGCEGGLMDDA-FEFII 205 (346)
Q Consensus 132 ~Dwr~~~---~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~--~lS~q~l~dc~~~~~~~gc~GG~~~~a-~~~~~ 205 (346)
||||+++ +|+||||||.||||||||++++||++++++++... .||||+|+||+.. +.||+||.+..+ ++|+.
T Consensus 211 ~DwR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~--~~GC~GG~~~~aa~~yi~ 288 (441)
T 3pdf_A 211 WDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQY--AQGCEGGFPYLIAGKYAQ 288 (441)
T ss_dssp EETTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHTTHHHH
T ss_pred EECCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccC--CCCCCCCchhHHHHHHHH
Confidence 9999964 89999999999999999999999999999998764 5999999999864 789999999987 89998
Q ss_pred HhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecC----CChHHHHHHHHH-cCCeEEEEEccCccccccCCCeEe
Q 042468 206 SNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVP----SNNEAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFT 280 (346)
Q Consensus 206 ~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~----~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~ 280 (346)
+. |+++|++|||.+..+.|... .....+.+.+|..++ ..++++|+++|+ +|||+|+|++. ++|++|++|||.
T Consensus 289 ~~-Gi~tE~~yPY~~~~~~C~~~-~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~ 365 (441)
T 3pdf_A 289 DF-GLVEEACFPYTGTDSPCKMK-EDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYH 365 (441)
T ss_dssp HT-CBCBGGGSCCCSSCCCSCCC-SSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEEC
T ss_pred hc-CCCcHHHeeecccCCCCCCc-cccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEe
Confidence 65 99999999999999999875 344566788888875 357889999988 79999999998 799999999998
Q ss_pred CC-CC------CCCCeEEEEEEeecc-CCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCccccccccee
Q 042468 281 GQ-CG------TELDHGVTAVGYGTA-DDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYP 344 (346)
Q Consensus 281 ~~-~~------~~~~Hav~iVGyg~~-~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p 344 (346)
.+ |. ..++|||+|||||++ ++|++|||||||||++|||+|||||+|+. |.|||++.++++
T Consensus 366 ~~~~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~----n~CGI~s~~~a~ 433 (441)
T 3pdf_A 366 HTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGT----DECAIESIAVAA 433 (441)
T ss_dssp CC---CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCCEEE
T ss_pred cCCCCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCC----CccCCCCceEEe
Confidence 77 32 248999999999986 47899999999999999999999999997 359999998864
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=4.6e-70 Score=507.14 Aligned_cols=274 Identities=26% Similarity=0.456 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCCCeEEecc-cCCCCChHHHhcccCCCcCCCCcccCCCCcccccccC--CCCCCceee
Q 042468 57 EMRFKIFKENVEYIASFNNKARNKPYKLGIN-EFADQTNEEFRAPRNGYKRRLPSVRSSETTDVSFRYE--NASVPASID 133 (346)
Q Consensus 57 ~~R~~~f~~n~~~I~~~N~~~~~~s~~~g~N-~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lP~~~D 133 (346)
..|+..+..+.++|++||+ ..+.+|++++| +|+|||.+||++++ +..+....... .....+... ..+||++||
T Consensus 2 ~~~~~a~~~~~~~i~~~N~-~~~~~~~~~~n~~f~dlt~eE~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~lP~s~D 77 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNR-LNRGIWKAKYDGVMQNITLREAKRLN-GVIKKNNNASI--LPKRRFTEEEARAPLPSSFD 77 (325)
T ss_dssp --------------------------------------------------------CC--SCBCCCCHHHHHCCCCSCEE
T ss_pred CcccccccccHHHHHHHHh-CCCCceEEecccccccCCHHHHHHHh-CCCCCCccccc--ccCccccccccccCCCCcEe
Confidence 3567788889999999998 34579999999 89999999999864 43321111000 001111111 137999999
Q ss_pred ccCC----CCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCC-CccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHhC
Q 042468 134 WRKK----GAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRK-LTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNK 208 (346)
Q Consensus 134 wr~~----~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~-~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~~ 208 (346)
||++ |.|+||||||.||||||||++++||++++++++. .++||||+|+||+.. .+.||+||++..|++|+.++
T Consensus 78 wR~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~-~~~GC~GG~~~~A~~yi~~~- 155 (325)
T 3hhi_A 78 SAEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSD-CGDGCNGGDPDRAWAYFSST- 155 (325)
T ss_dssp HHHHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGG-GBCTTBCBCHHHHHHHHHHT-
T ss_pred hhHhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccC-CCCCCCCCCHHHHHHHHHHh-
Confidence 9998 8999999999999999999999999999999987 899999999999873 36899999999999999876
Q ss_pred CCCCCCCCCCc-CC----------CCCcCCC-C--------------CCCCceEeeeeEecCCChHHHHHHHHH-cCCeE
Q 042468 209 GLATEAKYPYK-AS----------DGSCNKK-E--------------ANPSAAKISGYEDVPSNNEAALMKAVA-NQPVS 261 (346)
Q Consensus 209 G~~~e~~~PY~-~~----------~~~c~~~-~--------------~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~ 261 (346)
|+++|++|||. +. .+.|... . .......+..|. + .++++|+++|+ +|||+
T Consensus 156 Gi~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~ 232 (325)
T 3hhi_A 156 GLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFE 232 (325)
T ss_dssp CBCBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEE
T ss_pred CCCcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEE
Confidence 99999999998 32 2556510 0 011223456776 4 58899999997 79999
Q ss_pred EEEEccCccccccCCCeEeCCCCC-CCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccc
Q 042468 262 VAIDASGSDFQFYSSGVFTGQCGT-ELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQ 340 (346)
Q Consensus 262 v~~~~~~~~f~~y~~gi~~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~ 340 (346)
|+|++. ++|++|++|||..++.. .++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.
T Consensus 233 v~i~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~----n~CGI~~~ 306 (325)
T 3hhi_A 233 VAFDVY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTS-NGVPYWKIANSWNTEWGMDGYFLIRRGS----SECGIEDG 306 (325)
T ss_dssp EEEEEE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSC
T ss_pred EEEEec-cccccccCceecCCCCCCCCCEEEEEEEEEec-CCceEEEEEeCCCCCcccCCEEEEEcCC----CeecCccc
Confidence 999998 79999999999988654 56999999999986 7999999999999999999999999997 45999999
Q ss_pred cceee
Q 042468 341 ASYPT 345 (346)
Q Consensus 341 ~~~p~ 345 (346)
+++++
T Consensus 307 ~~~g~ 311 (325)
T 3hhi_A 307 GSAGI 311 (325)
T ss_dssp EEEEE
T ss_pred eEEee
Confidence 98764
No 12
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=6.3e-68 Score=469.25 Aligned_cols=217 Identities=59% Similarity=1.089 Sum_probs=199.5
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|+||+....+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999986557899999999999999988
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCCCC
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTEL 287 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~ 287 (346)
+|+++|++|||....+.|.........+++.+|..++..++++|+++|.+|||+++|++..++|++|++|||..+|+...
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV 160 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCSC
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCcc
Confidence 89999999999998889986433344678999999987889999999988999999999756899999999998888888
Q ss_pred CeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 288 DHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 288 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+|||+|||||++ +|++|||||||||++|||+|||||+|+.++ .|.|||++.++||++
T Consensus 161 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~-~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 161 DHAVTIVGYGTE-GGIDYWIVKNSWGTTWGEEGYMRIQRNVGG-VGQCGIAKKASYPVK 217 (220)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCCT-TCGGGTTSSCEEEEC
T ss_pred ceEEEEEEEecC-CCceEEEEECCCCCCcccCCEEEEECCCCC-CCccCcccccceEEE
Confidence 999999999976 789999999999999999999999999863 368999999999985
No 13
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=2.5e-67 Score=465.34 Aligned_cols=216 Identities=57% Similarity=1.095 Sum_probs=198.7
Q ss_pred CCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHH
Q 042468 127 SVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIIS 206 (346)
Q Consensus 127 ~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 206 (346)
+||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||... +.||+||++..|++|+.+
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~y~~~ 79 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA--NHGCRGGWMNPAFQFIVN 79 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC--CCCCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999999865 789999999999999998
Q ss_pred hCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCCC
Q 042468 207 NKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTE 286 (346)
Q Consensus 207 ~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~ 286 (346)
++|+++|++|||.+..+.|.... ....+++.+|..++..++++|+++|++|||+++|++..++|+.|++|||..+|+..
T Consensus 80 ~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~ 158 (221)
T 1cqd_A 80 NGGINSEETYPYRGQDGICNSTV-NAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNIS 158 (221)
T ss_dssp HTSBCBTTTSCCCSSCCCCCSSS-CCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCC
T ss_pred hCCccccccCCccCCCCCcCCCC-CCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCCc
Confidence 77999999999999888998763 34568899999998778999999999999999999986689999999999888888
Q ss_pred CCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 287 LDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 287 ~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
++|||+|||||++ +|++|||||||||++|||+|||||+|+.++..|.|||+++++||++
T Consensus 159 ~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 159 ANHALTVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp CCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CCeEEEEEEEccc-CCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 9999999999988 7899999999999999999999999987543478999999999985
No 14
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=2.6e-67 Score=463.72 Aligned_cols=215 Identities=53% Similarity=1.018 Sum_probs=197.4
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~ 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEYVAKN 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC--CCCCCCCCCHHHHHHHHHHh
Confidence 6999999999999999999999999999999999999999999999999999999986 37899999999999999877
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCCCC
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTEL 287 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~ 287 (346)
|+++|++|||....+.|.........+++.+|..++..++++|+++|++|||+++|++..++|++|++|||..+|+...
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 157 (216)
T 1ppo_A 79 -GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKV 157 (216)
T ss_dssp -CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSCC
T ss_pred -CcCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCCC
Confidence 8999999999998889986533345688999999987789999999999999999999756899999999998888778
Q ss_pred CeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 288 DHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 288 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+|||+|||||++ +|++|||||||||++|||+|||||+|+.++..|.|||+++++||++
T Consensus 158 ~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 158 DHAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred CEEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 999999999988 6899999999999999999999999997544478999999999985
No 15
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=4.6e-67 Score=461.57 Aligned_cols=214 Identities=57% Similarity=1.090 Sum_probs=197.4
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||... +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~ 78 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA--SHGCNGGWMNNAFQYIITN 78 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCC--CCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999864 7899999999999999887
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCCCC
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTEL 287 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~ 287 (346)
.|+++|++|||....+.|.... ...+++.+|..++..++++|+++|++|||+++|++...+|+.|++|||..+|+..+
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~--~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~ 156 (215)
T 1iwd_A 79 GGIDTQQNYPYSAVQGSCKPYR--LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQ 156 (215)
T ss_dssp TCBCBTTTSCCCSSCCCCCTTC--CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCcccccccCccCCCCCCCCCC--CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCcC
Confidence 7999999999999888998753 35678999999987789999999999999999999844899999999998888788
Q ss_pred CeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 288 DHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 288 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+|||+|||||++ +|++|||||||||++|||+|||||+|+.+...|.|||+++++||++
T Consensus 157 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 157 NHGVVIVGYGTQ-SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CEEEEEEEEecc-CCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 999999999988 7899999999999999999999999997543467999999999985
No 16
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=6e-67 Score=462.00 Aligned_cols=215 Identities=52% Similarity=1.010 Sum_probs=196.9
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~ 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK--HSYGCKGGYQTTSLQYVANN 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHc
Confidence 6999999999999999999999999999999999999999999999999999999984 47899999999999999877
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCCCC
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTEL 287 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~ 287 (346)
|+++|++|||....+.|.........+++.+|..++..++++|+++|++|||+++|++..++|++|++|||..+|+..+
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~ 157 (218)
T 1yal_A 79 -GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKL 157 (218)
T ss_dssp -CBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCC
T ss_pred -CCCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCCC
Confidence 8999999999998889986533345688999999987789999999999999999999756899999999998888778
Q ss_pred CeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 288 DHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 288 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+|||+|||||++ +|++|||||||||++|||+|||||+|+.++..|.|||+++++||++
T Consensus 158 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 158 DHAVTAVGYGTS-DGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred CEEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 999999999988 6899999999999999999999999997433467999999999985
No 17
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=8.6e-67 Score=464.16 Aligned_cols=219 Identities=72% Similarity=1.240 Sum_probs=198.6
Q ss_pred CCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHH
Q 042468 127 SVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIIS 206 (346)
Q Consensus 127 ~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 206 (346)
+||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||... .+.||+||++..|++|+.+
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~~gC~GG~~~~a~~y~~~ 79 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD-QNQGCNGGLMDYAFEFIKQ 79 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCTTBCBCHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCC-CCCCCCCCCHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999999863 3789999999999999988
Q ss_pred hCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCCC
Q 042468 207 NKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTE 286 (346)
Q Consensus 207 ~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~ 286 (346)
++|+++|++|||....+.|.........+++.+|..++..++++|+++|++|||+++|++..++|++|++|||..+|+..
T Consensus 80 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~ 159 (229)
T 1s4v_A 80 RGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTE 159 (229)
T ss_dssp HTCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCC
T ss_pred hCCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCCC
Confidence 77999999999999888997542234567899999998778899999999999999999954789999999999888877
Q ss_pred CCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 287 LDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 287 ~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
++|||+|||||++.+|++|||||||||++|||+|||||+|+.+...|.|||+++++||++
T Consensus 160 ~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 160 LDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp CCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CCeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEe
Confidence 899999999999855899999999999999999999999997544478999999999985
No 18
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=5.9e-67 Score=463.50 Aligned_cols=214 Identities=54% Similarity=1.033 Sum_probs=192.2
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||... +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~ 78 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX--XXXXXGGDADDAFRWVITN 78 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC--------CCCHHHHHHHHHHH
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc--ccccCCCCHHHHHHHHHHc
Confidence 79999999999999999999999999999999999999999999999999999999875 7899999999999999987
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCC-CeEeC-CCCC
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSS-GVFTG-QCGT 285 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~-gi~~~-~~~~ 285 (346)
.|+++|++|||.+..+.|...... .+++.+|..++ .++++|+++|.+|||+++|++...+|+.|++ |||.. +|..
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~~--~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~ 155 (222)
T 3u8e_A 79 GGIASDANYPYTGVDGTCDLNKPI--AARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSD 155 (222)
T ss_dssp TCBCBTTTSCCCSSCCCCCCCSCC--CBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCC
T ss_pred CCccchhcCCCcccCCccccCCCC--eEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccC
Confidence 799999999999999999876332 78899999998 7899999999999999999998558999999 99998 4765
Q ss_pred ---CCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 286 ---ELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 286 ---~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
.++|||+|||||++.++++|||||||||++|||+|||||+|+.+++.|.|||+++++||++
T Consensus 156 ~~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 156 DPATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp CGGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred CCCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 6899999999998744899999999999999999999999998755578999999999985
No 19
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=3.3e-66 Score=455.39 Aligned_cols=211 Identities=50% Similarity=0.970 Sum_probs=193.5
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||||+|+||.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~ 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR--RSYGCNGGYPWSALQLVAQY 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHT
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC--CCCCCCCCCHHHHHHHHHHh
Confidence 6999999999999999999999999999999999999999999999999999999986 37899999999999999876
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCCCC
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTEL 287 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~ 287 (346)
|+++|++|||....+.|.........+++.+|..++..++++|+++|++|||+++|++...+|++|++|||..+|+..+
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~~ 157 (212)
T 2cio_A 79 -GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKV 157 (212)
T ss_dssp -CBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCC
T ss_pred -CcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCCC
Confidence 8999999999998889987643345788999999987789999999999999999999845899999999998888778
Q ss_pred CeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 288 DHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 288 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+|||+|||||+ +|||||||||++|||+|||||+|+.+...|.|||+++++||++
T Consensus 158 ~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 158 DHAVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp CEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred CEEEEEEEecC-----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 99999999995 8999999999999999999999997544467999999999985
No 20
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=6.6e-67 Score=471.91 Aligned_cols=219 Identities=64% Similarity=1.195 Sum_probs=199.9
Q ss_pred CCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHH
Q 042468 127 SVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIIS 206 (346)
Q Consensus 127 ~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 206 (346)
+||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||... .+.||+||++..|++|+.+
T Consensus 3 ~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 3 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCGGGCBCHHHHHHHHHH
T ss_pred CCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCC-CCCCCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999999863 4789999999999999987
Q ss_pred hCCCCCCCCCCCcCCCCCcCCCC--CCCC-ceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCC
Q 042468 207 NKGLATEAKYPYKASDGSCNKKE--ANPS-AAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQC 283 (346)
Q Consensus 207 ~~G~~~e~~~PY~~~~~~c~~~~--~~~~-~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~ 283 (346)
++|+++|++|||....+.|.... .... .+++.+|..++..++++|+++|++|||+++|++..++|++|++|||..+|
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~c 161 (262)
T 2fo5_A 82 NGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGEC 161 (262)
T ss_dssp TTCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCC
T ss_pred cCCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCCC
Confidence 77999999999999888998642 1234 67899999998778899999999999999999975689999999999888
Q ss_pred CCCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 284 GTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 284 ~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+...+|||+|||||++.+|++|||||||||++|||+|||||+|+.++..|.|||++.++||++
T Consensus 162 ~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 162 GTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp CCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred CCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 877899999999998756899999999999999999999999998665578999999999985
No 21
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=1.1e-66 Score=460.97 Aligned_cols=214 Identities=51% Similarity=0.946 Sum_probs=196.6
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhc-CCCCCCCCCCCChHHHHHHHHH
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCD-TSGEDQGCEGGLMDDAFEFIIS 206 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~-~~~~~~gc~GG~~~~a~~~~~~ 206 (346)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||. ....+.||+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 4345789999999999999987
Q ss_pred hCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCccccccCCCeEeCC-CC
Q 042468 207 NKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTGQ-CG 284 (346)
Q Consensus 207 ~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~~~-~~ 284 (346)
++|+++|++|||....+.|... ......++.+|..++..++++||++|+ +|||++++++..++|++|++|||..+ |.
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 160 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT 160 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCC
T ss_pred hCCcCcccccCccCCCCcccCC-CccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCC
Confidence 7799999999999998999876 344567888999998778999999999 59999999998568999999999987 87
Q ss_pred CCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 285 TELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 285 ~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
..++|||+|||||++ +|++|||||||||++|||+|||||+|+.+ |.|||+++++||++
T Consensus 161 ~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 161 QNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPEI 218 (218)
T ss_dssp SCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred cccCcEEEEEEEecc-CCceEEEEECCCCCccccCCEEEEecCCC---CcccccCceeeeeC
Confidence 789999999999988 68999999999999999999999999973 46999999999986
No 22
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=2.2e-66 Score=458.13 Aligned_cols=212 Identities=52% Similarity=0.962 Sum_probs=195.3
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~~~~~ 78 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKN 78 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999987 47899999999999999888
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCccccccCCCeEeCC-CC-
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTGQ-CG- 284 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~~~-~~- 284 (346)
.|+++|++|||....+.|... ......++.+|..++..++++||++|+ +|||+++|++..++|+.|++|||..+ |.
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~ 157 (215)
T 3kwz_A 79 RGIDSEDAYPYVGQEESCMYN-PTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNS 157 (215)
T ss_dssp TCEEBTTTSCCCSSCCCCCCC-GGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCT
T ss_pred CCccccccCCCccCCCccccC-CCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCC
Confidence 899999999999998999865 344567889999998778999999998 69999999998568999999999877 74
Q ss_pred CCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 285 TELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 285 ~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
..++|||+|||||++ ++++|||||||||++|||+|||||+|+.+ |.|||++.++||+|
T Consensus 158 ~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WG~~Gy~~i~r~~~---n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 158 DNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 215 (215)
T ss_dssp TCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTSSCEEECC
T ss_pred ChhhCEEEEEEEecc-CCceEEEEECCcCcccccCCEEEEecCCC---CccCcCCceeeeeC
Confidence 578999999999987 78999999999999999999999999974 46999999999986
No 23
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=5.8e-66 Score=454.25 Aligned_cols=211 Identities=51% Similarity=1.028 Sum_probs=194.3
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER--RSHGCDGGYQTTSLQYVVDN 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 6999999999999999999999999999999999999999999999999999999986 37899999999999999988
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCCCC
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTEL 287 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~ 287 (346)
|+++|++|||....+.|.........+++.+|..++..++++|+++|++|||+++|++..++|+.|++|||..+|+..+
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~ 157 (214)
T 2bdz_A 79 -GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNT 157 (214)
T ss_dssp -CEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSCC
T ss_pred -CCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCCC
Confidence 9999999999998889987643345788999999987789999999999999999999856899999999998888789
Q ss_pred CeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 288 DHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 288 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+|||+|||||+ +|||||||||++|||+|||||+|+.++..|.|||+++++||++
T Consensus 158 ~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 158 DHAVTAVGYGK-----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp CEEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred CeEEEEEEcCC-----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 99999999995 8999999999999999999999997544467999999999985
No 24
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=3.4e-66 Score=455.75 Aligned_cols=211 Identities=49% Similarity=0.970 Sum_probs=194.1
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||||+|+||... +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~ 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCERR--SYGCRGGFPLYALQYVANS 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcCC--CCCCCCCCHHHHHHHHHHc
Confidence 79999999999999999999999999999999999999999999999999999999873 7899999999999999987
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCCCC
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTEL 287 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~ 287 (346)
|+++|++|||.+..+.|.........+++.+|..++..+++.+++++.+|||+++|++..++|+.|++|||..+|...+
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~ 157 (213)
T 3ioq_A 79 -GIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTSI 157 (213)
T ss_dssp -CEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCC
T ss_pred -CCCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCcc
Confidence 9999999999999999986544556788999999987778888888889999999999766899999999999888888
Q ss_pred CeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 288 DHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 288 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+|||+|||||+ +|||||||||++|||+|||||+|+.+.+.|.|||+++++||++
T Consensus 158 ~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 158 DHAVAAVGYGN-----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp CEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred CceEEEEecCC-----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 99999999984 7999999999999999999999997544478999999999985
No 25
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=4.7e-66 Score=457.27 Aligned_cols=214 Identities=53% Similarity=0.996 Sum_probs=194.1
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||....++.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999875557899999999999999766
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCccccccCCCeEeCC-CCC
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTGQ-CGT 285 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~~~-~~~ 285 (346)
.|+++|++|||....+.|... .....+++.+|..++. ++++||++|+ +|||+++|++..++|++|++|||..+ |+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~ 158 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYN-PKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS 158 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCC-GGGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCS
T ss_pred CCcccccccCCcccCcCccCC-CCCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCC
Confidence 799999999999988899865 2345678899999985 8899999999 59999999998568999999999987 774
Q ss_pred -CCCeEEEEEEeec---cCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 286 -ELDHGVTAVGYGT---ADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 286 -~~~Hav~iVGyg~---~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
.++|||+|||||+ +++|++|||||||||++|||+|||||+|+.+ |.|||+++++||++
T Consensus 159 ~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~---n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 159 EDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPTV 220 (220)
T ss_dssp SCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred CCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCC---CcCCccccceeeeC
Confidence 7899999999994 3368999999999999999999999999874 46999999999985
No 26
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=3.1e-66 Score=480.54 Aligned_cols=261 Identities=31% Similarity=0.578 Sum_probs=207.9
Q ss_pred HHHHHHHHcccCCCCCeEEecccCCCCChHHHhcccCCCcCCCCcccCCCCcccccccC-CCCCCceeeccCC----CCC
Q 042468 66 NVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKRRLPSVRSSETTDVSFRYE-NASVPASIDWRKK----GAV 140 (346)
Q Consensus 66 n~~~I~~~N~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lP~~~Dwr~~----~~v 140 (346)
+.++|++||+ .+.+|++|+| |+|++.||++.+ ++.+++.... ...+... ..+||++||||++ +.|
T Consensus 11 ~~~~i~~~N~--~~~~~~~~~n-f~~~~~e~~~~~-lg~~~~~~~~------~~~~~~~~~~~lP~s~DwR~~~~~c~~v 80 (317)
T 3pbh_A 11 SDELVNYVNK--RNTTWQAGHN-FYNVDMSYLKRL-CGTFLGGPKP------PQRVMFTEDLKLPASFDAREQWPQCPTI 80 (317)
T ss_dssp CHHHHHHHHH--HTCSEEECCC-CSSCCHHHHHHT-CCBCTTCCCC------SEEECCCSCCCCCSSEEHHHHCTTCGGG
T ss_pred cHHHHHHHHC--CCCCeEEeec-cccCCHHHHHHH-cCCCCCcccc------CcccccccccCCCCCEechhccCCCCCc
Confidence 4578999997 4789999999 999988887664 5554322111 1111111 2379999999987 679
Q ss_pred CccCCCCCCccHHHHHHHHHHHHHHHHhcCC--CccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHhCCCCCCCCC--
Q 042468 141 TGVKDQGQCGCCWAFSAVAAMEGINHITTRK--LTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAKY-- 216 (346)
Q Consensus 141 ~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~--~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~~G~~~e~~~-- 216 (346)
+||||||.||||||||++++||++++++++. .+.||+|+|+||+....+.||+||++..|++|+.++ |+++|..|
T Consensus 81 tpVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~ 159 (317)
T 3pbh_A 81 KEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYES 159 (317)
T ss_dssp TCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTC
T ss_pred CCccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccC
Confidence 9999999999999999999999999999864 799999999999873346899999999999999976 99999888
Q ss_pred -----CCcC---------CCCCcCCCCCC-------CCce---------EeeeeEecCCChHHHHHHHHH-cCCeEEEEE
Q 042468 217 -----PYKA---------SDGSCNKKEAN-------PSAA---------KISGYEDVPSNNEAALMKAVA-NQPVSVAID 265 (346)
Q Consensus 217 -----PY~~---------~~~~c~~~~~~-------~~~~---------~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~ 265 (346)
||.. ..+.|...... ...+ .......++ .++++|+++|+ +|||+|+|+
T Consensus 160 ~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~ 238 (317)
T 3pbh_A 160 HVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFS 238 (317)
T ss_dssp CCBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEE
T ss_pred CCCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEE
Confidence 9984 23456421000 0001 111223454 57899999987 799999999
Q ss_pred ccCccccccCCCeEeCCCCC-CCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCccccccccee
Q 042468 266 ASGSDFQFYSSGVFTGQCGT-ELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYP 344 (346)
Q Consensus 266 ~~~~~f~~y~~gi~~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p 344 (346)
+. ++|++|++|||..+|+. .++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++.+
T Consensus 239 ~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~ri~rg~----n~CgI~~~~~a~ 312 (317)
T 3pbh_A 239 VY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKILRGQ----DHCGIESEVVAG 312 (317)
T ss_dssp EE-GGGGGEEEEEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEC
T ss_pred ec-ccccCCCCcEEccCCCCCCCCEEEEEEEEEEe-CCeeEEEEEcCCCCCcCCCcEEEEEcCC----CcccCCCceEee
Confidence 98 79999999999998765 45999999999987 7999999999999999999999999997 359999998764
No 27
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=1.2e-65 Score=450.30 Aligned_cols=207 Identities=59% Similarity=1.059 Sum_probs=190.7
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||||+|+||.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK--KNHGCLGGAFVFAYQYIINN 78 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 6999999999999999999999999999999999999999999999999999999986 37899999999999999877
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCCCC
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTEL 287 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~ 287 (346)
.|+++|++|||....+.|.. ....+++.+|..++..++++|+++|++|||+++|++...+|++|++|||..+|+..+
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~---~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~ 155 (208)
T 1o0e_A 79 GGIDTQANYPYKAVQGPCQA---ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKL 155 (208)
T ss_dssp TCBCBTTTSCCCSSCCCCCC---CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCC
T ss_pred CCcCcccccCccCCCCcCCC---CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCcC
Confidence 79999999999998889976 234678999999987788999999999999999999855899999999998888788
Q ss_pred CeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 288 DHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 288 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+|||+|||||+ +|||||||||++|||+|||||+|+.+ .|.|||+++++||++
T Consensus 156 ~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~--~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 156 NHGVTIVGYQA-----NYWIVRNSWGRYWGEKGYIRMLRVGG--CGLCGIARLPYYPTK 207 (208)
T ss_dssp CEEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCST--TCGGGTTSSCEEEEC
T ss_pred CEEEEEEEeCC-----CeEEEEcCCCCcccCCcEEEEEcCCC--CCcCCCcccceeeec
Confidence 99999999995 89999999999999999999999973 256999999999985
No 28
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=2.6e-65 Score=458.93 Aligned_cols=214 Identities=47% Similarity=0.899 Sum_probs=194.5
Q ss_pred CCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHH
Q 042468 127 SVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIIS 206 (346)
Q Consensus 127 ~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 206 (346)
+||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+. .+.||+||++..|++|+.+
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~--~~~gC~GG~~~~a~~y~~~ 78 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD--ESEGCYNGWHYQSFEWVVK 78 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSBTTTBCCHHHHHHHHHH
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999986 3789999999999999987
Q ss_pred hCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeee---EecCCChHHHHHHHHHc----CCeEEEEEccCccccccCCCeE
Q 042468 207 NKGLATEAKYPYKASDGSCNKKEANPSAAKISGY---EDVPSNNEAALMKAVAN----QPVSVAIDASGSDFQFYSSGVF 279 (346)
Q Consensus 207 ~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~---~~~~~~~~~~i~~~l~~----gPv~v~~~~~~~~f~~y~~gi~ 279 (346)
+.|+++|++|||....+.|... .....+++.+| ..++..++++|+++|++ |||+++|++ ++|++|++|||
T Consensus 79 ~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy 155 (246)
T 2b1m_A 79 HGGIASEADYPYKARDGKCKAN-EIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIY 155 (246)
T ss_dssp TTCBCBTTTSCCCSSCCCCCGG-GCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEE
T ss_pred hCCcCccccccccCCCCcCcCC-CCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceee
Confidence 7799999999999988899865 33456788999 88887788999999987 999999999 58999999999
Q ss_pred eCC-CCCC--CCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 280 TGQ-CGTE--LDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 280 ~~~-~~~~--~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
..+ |+.. ++|||+|||||++ +|++|||||||||++|||+|||||+|+.++..|.|||++.++||++
T Consensus 156 ~~~~c~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 156 DGGNCSSPYGINHFVLIVGYGSE-DGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp CCTTCCSSCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred cCCCCCCCCcCceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 984 7764 8999999999988 7999999999999999999999999997444467999999999985
No 29
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=1.4e-65 Score=459.74 Aligned_cols=214 Identities=39% Similarity=0.809 Sum_probs=195.9
Q ss_pred CCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHH
Q 042468 127 SVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIIS 206 (346)
Q Consensus 127 ~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 206 (346)
+||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||... +.||+||++..|++|+.+
T Consensus 17 ~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~--~~gC~GG~~~~a~~yi~~ 94 (241)
T 2oul_A 17 FDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFK--NYGCNGGLINNAFEDMIE 94 (241)
T ss_dssp CCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTT--SCTTBCBCHHHHHHHHHH
T ss_pred cCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCC--CCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999999864 789999999999999987
Q ss_pred hCCCCCCCCCCCcCCCCC-cCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCC
Q 042468 207 NKGLATEAKYPYKASDGS-CNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGT 285 (346)
Q Consensus 207 ~~G~~~e~~~PY~~~~~~-c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~ 285 (346)
+.|+++|++|||....+. |... .....+++.+|..++..++++||++| |||+++|++. ++|+.|++|||..+|+.
T Consensus 95 ~~Gi~~e~~yPY~~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~ 170 (241)
T 2oul_A 95 LGGICPDGDYPYVSDAPNLCNID-RCTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGIFDGECGD 170 (241)
T ss_dssp TTSBCBTTSSCCCTTSCCCCCTT-SSSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSBCCSCBCS
T ss_pred hCCcCccccCCCcCCCCCcCCCC-CCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcEEcCcCCC
Confidence 679999999999998888 9875 34457889999999877899999999 9999999997 78999999999887776
Q ss_pred CCCeEEEEEEeeccC---------CCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 286 ELDHGVTAVGYGTAD---------DGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 286 ~~~Hav~iVGyg~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
.++|||+|||||++. .|++|||||||||++|||+|||||+|+.++..+.|||+++++||++
T Consensus 171 ~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 171 QLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp SCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred CCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 689999999999873 2789999999999999999999999998765567999999999985
No 30
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=7.9e-66 Score=457.43 Aligned_cols=218 Identities=49% Similarity=0.970 Sum_probs=198.7
Q ss_pred CCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHH
Q 042468 127 SVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIIS 206 (346)
Q Consensus 127 ~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 206 (346)
+||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|++|....++.||+||.+..|++|+.+
T Consensus 6 ~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~~ 85 (224)
T 3f75_A 6 ELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLD 85 (224)
T ss_dssp GSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHHH
T ss_pred CCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999987555789999999999999997
Q ss_pred hCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCCC
Q 042468 207 NKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTE 286 (346)
Q Consensus 207 ~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~ 286 (346)
++|+++|++|||....+.|.... .....++.+|..++..++++|+++|++|||+++|++..++|++|++|||.+.|+..
T Consensus 86 ~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 164 (224)
T 3f75_A 86 SGGICSEDAYPYLARDEECRAQS-CEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGTD 164 (224)
T ss_dssp HTCBCBTTTSCCCSSCCCCCGGG-SCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCCC
T ss_pred hCCccccccCCCcCCCCCCCcCC-CCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCCc
Confidence 67999999999999888998653 34556789999998788999999999999999999985589999999999668888
Q ss_pred CCeEEEEEEeeccC-CCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 287 LDHGVTAVGYGTAD-DGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 287 ~~Hav~iVGyg~~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
++|||+|||||++. ++++|||||||||++||++|||||+|+... .|.|||+++++||++
T Consensus 165 ~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 165 LDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGE-EGQCGLLLDASFPVM 224 (224)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCT-TCGGGTTSSCEEEEC
T ss_pred cCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCC-CCcCcccCceeeeeC
Confidence 99999999999874 688999999999999999999999999731 256999999999986
No 31
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=2.4e-65 Score=458.82 Aligned_cols=214 Identities=39% Similarity=0.788 Sum_probs=195.7
Q ss_pred CCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHH
Q 042468 127 SVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIIS 206 (346)
Q Consensus 127 ~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 206 (346)
+||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||... +.||+||++..|++|+.+
T Consensus 19 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~--~~gC~GG~~~~a~~y~~~ 96 (243)
T 3bwk_A 19 LDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVK--NNGCYGGYITNAFDDMID 96 (243)
T ss_dssp CCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTT--SCGGGCCCHHHHHHHHHH
T ss_pred cCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCC--CCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999999864 789999999999999987
Q ss_pred hCCCCCCCCCCCcCCCCC-cCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccCccccccCCCeEeCCCCC
Q 042468 207 NKGLATEAKYPYKASDGS-CNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGT 285 (346)
Q Consensus 207 ~~G~~~e~~~PY~~~~~~-c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~gi~~~~~~~ 285 (346)
+.|+++|++|||....+. |... .....+++.+|..++..++++||++| |||+++|++. ++|+.|++|||...|+.
T Consensus 97 ~~Gi~~e~~yPY~~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~ 172 (243)
T 3bwk_A 97 LGGLCSQDDYPYVSNLPETCNLK-RCNERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRGGFYDGECGA 172 (243)
T ss_dssp TTSBCBTTTSCCCTTSCCCCCGG-GCSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCSSSCCCCCCS
T ss_pred hCCcccccccCCcCCCCCcCCCC-CCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCCceecCCCCC
Confidence 679999999999988887 9865 33456889999999877899999999 9999999997 78999999999888776
Q ss_pred CCCeEEEEEEeeccC---------CCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 286 ELDHGVTAVGYGTAD---------DGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 286 ~~~Hav~iVGyg~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
.++|||+|||||++. .|++|||||||||++||++|||||+|+.++..+.|||+++++||++
T Consensus 173 ~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 173 APNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp SCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred cCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 699999999999873 2789999999999999999999999998755567999999999985
No 32
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=2.1e-65 Score=453.30 Aligned_cols=211 Identities=45% Similarity=0.922 Sum_probs=194.2
Q ss_pred CCceeeccCCC-CCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHH
Q 042468 128 VPASIDWRKKG-AVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIIS 206 (346)
Q Consensus 128 lP~~~Dwr~~~-~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 206 (346)
||++||||++| +|+||||||.||||||||+++++|+++++++++.++||+|+|+||+....+.||+||++..|++|+.+
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999999 89999999999999999999999999999999999999999999987556789999999999999998
Q ss_pred hCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCccccccCCCeEeCC-CC
Q 042468 207 NKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTGQ-CG 284 (346)
Q Consensus 207 ~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~~~-~~ 284 (346)
+.|+++|++|||....+.|... ......++.+|..++..++++|+++|+ +|||++++++. ++|+.|++|||..+ |.
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~ 158 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQ-PDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCH 158 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCC-GGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCC
T ss_pred cCCcCcccccCccCCCCCCCCC-CCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCC
Confidence 7799999999999988899876 344567889999998788999999998 69999999998 58999999999886 65
Q ss_pred C---CCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 042468 285 T---ELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPT 345 (346)
Q Consensus 285 ~---~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 345 (346)
. .++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||+
T Consensus 159 ~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~~~ 217 (220)
T 8pch_A 159 KTPDKVNHAVLAVGYGEE-NGIPYWIVKNSWGPQWGMNGYFLIERGK----NMCGLAACASYPI 217 (220)
T ss_dssp CSTTTCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEE
T ss_pred CCCCcCCcEEEEEEEEcc-CCeeEEEEECCCCcCcccCCEEEEEcCC----CccccCCCceeEe
Confidence 3 68999999999987 6899999999999999999999999986 4699999999997
No 33
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1.7e-64 Score=445.54 Aligned_cols=208 Identities=46% Similarity=0.894 Sum_probs=185.7
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+||||||||.||||||||+++++|++++++++..++||||+|+||+.. +.||+||++..|++|+.++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~y~~~~ 78 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT--DSGCSGGLMNNAFEWIVQE 78 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSS--SCGGGCCCHHHHHHHHHHH
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCC--CCCCCCCCHHHHHHHHHHh
Confidence 69999999999999999999999999999999999999999999999999999999864 7899999999999999874
Q ss_pred --CCCCCCCCCCCcCCCC---CcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCccccccCCCeEeC
Q 042468 208 --KGLATEAKYPYKASDG---SCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTG 281 (346)
Q Consensus 208 --~G~~~e~~~PY~~~~~---~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~~ 281 (346)
+|+++|++|||....+ .|... .....+++.+|..++ .++++|+++|+ +|||++++++. +|++|++|||..
T Consensus 79 ~~gGi~~e~~yPY~~~~~~~~~C~~~-~~~~~~~i~~~~~v~-~~~~~ik~~l~~~gPV~v~~~~~--~f~~Y~~Giy~~ 154 (215)
T 3i06_A 79 NNGAVYTEDSYPYASGEGISPPCTTS-GHTVGATITGHVELP-QDEAQIAAWLAVNGPVAVAVDAS--SWMTYTGGVMTS 154 (215)
T ss_dssp STTEEEC-CCSCCCCTTSCCCCCCCS-SCCEEEEEEEEEECC-SCHHHHHHHHHHHCCEEEEECCT--TGGGCCSSEECS
T ss_pred ccccccccCccCCcCCCCCCCccccC-CcccceEecceEEeC-ChHHHHHHHHHHCCCEEEEEEch--HHhcCCCCcccC
Confidence 4799999999986543 68765 234567899999997 47899999998 79999999984 899999999986
Q ss_pred CCCCCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 282 QCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 282 ~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
.....++|||+|||||++ ++++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 155 ~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~rg~----n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 155 CVSEQLDHGVLLVGYNDS-AAVPYWIIKNSWTTQWGEEGYIRIAKGS----NQCLVKEEASSAVV 214 (215)
T ss_dssp CCCSCCCEEEEEEEEESS-SSSCEEEEECSBCTTSTBTTEEEEESSS----CGGGTTSSEEEEEE
T ss_pred CCCCccCcEEEEEEEecc-CCcEEEEEECCCCCCcccCceEEEecCC----CeecCCCceeEEec
Confidence 445678999999999987 7899999999999999999999999996 45999999999985
No 34
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=1.5e-64 Score=445.62 Aligned_cols=208 Identities=43% Similarity=0.789 Sum_probs=188.6
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHh
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISN 207 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 207 (346)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||||+|+||... +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~i~~~ 78 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM--DKACMGGLPSNAYSAIKNL 78 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSS--SCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCC--CCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999864 6899999999999999877
Q ss_pred CCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCccccccCCCeEeCC---C
Q 042468 208 KGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTGQ---C 283 (346)
Q Consensus 208 ~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~~~---~ 283 (346)
+|+++|++|||.+....|.... ....+++.++..++ .++++||++|+ +|||+++|++. .|++|++|||..+ |
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~i~-~~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c 154 (214)
T 1m6d_A 79 GGLETEDDYSYQGHMQSCQFSA-EKAKVYIQDSVELS-QNEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLC 154 (214)
T ss_dssp TCBCBTTTSCCCSSCCCCCCCG-GGCCBCCSEEEECC-SCHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGS
T ss_pred cCcccccCcCcCCCCCcCCCCc-ccceEEecCEEEeC-hHHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcC
Confidence 7999999999999888998652 33456788888887 47889999998 69999999997 5999999999863 6
Q ss_pred CC-CCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 284 GT-ELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 284 ~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+. .++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 155 ~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 155 SPWLIDHAVLLVGYGQR-SDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMASSAVV 213 (214)
T ss_dssp CTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSS----CGGGTTTTCEEEEC
T ss_pred CCCcCCEEEEEEEEeec-CCcEEEEEEeCCCCCcccCcEEEEEcCC----CccccCceeEEEEe
Confidence 54 68999999999987 7899999999999999999999999986 46999999999985
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=2.7e-64 Score=446.70 Aligned_cols=209 Identities=35% Similarity=0.617 Sum_probs=191.1
Q ss_pred CCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHH
Q 042468 127 SVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIIS 206 (346)
Q Consensus 127 ~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 206 (346)
+||++||||++|+|+||||||.||||||||+++++|+++.+++++.++||||+|+||.. +.||+||++..|++|+.+
T Consensus 9 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~~ 85 (222)
T 3f5v_A 9 NAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS---QHGCHGDTIPRGIEYIQH 85 (222)
T ss_dssp CCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHHHHHHHH
T ss_pred CCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC---CCCCCCCCHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999987 789999999999999998
Q ss_pred hCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHc--CCeEEEEEccC-ccccccCCCeEeCC-
Q 042468 207 NKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVAN--QPVSVAIDASG-SDFQFYSSGVFTGQ- 282 (346)
Q Consensus 207 ~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~--gPv~v~~~~~~-~~f~~y~~gi~~~~- 282 (346)
+ |+++|++|||.+..+.|. . .....+++.+|..++..++++||++|++ |||+++|++.. ++|++|++|||...
T Consensus 86 ~-Gi~~e~~yPY~~~~~~C~-~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~ 162 (222)
T 3f5v_A 86 N-GVVQESYYRYVAREQSCR-R-PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRD 162 (222)
T ss_dssp H-CEEBGGGSCCCSSCCCCC-C-CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCC
T ss_pred c-CCCchhhCCCcccCCCcc-C-CcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCC
Confidence 6 999999999999888998 3 4556788999999977889999999985 89999999842 57999999987554
Q ss_pred C-CCCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 042468 283 C-GTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346 (346)
Q Consensus 283 ~-~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 346 (346)
+ ...++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||+|
T Consensus 163 ~~~~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 163 NGYQPNYHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVIL 222 (222)
T ss_dssp CSSSCEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEC
T ss_pred CCCCccCcEEEEEEEecc-CCCEEEEEEcCCCCCcccCCEEEEEcCC----CeecCCCceeEEeC
Confidence 3 4678999999999987 7899999999999999999999999995 46999999999986
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=1e-59 Score=427.98 Aligned_cols=211 Identities=33% Similarity=0.625 Sum_probs=176.2
Q ss_pred CCCceeeccCC----CCCCccCCCCCCccHHHHHHHHHHHHHHHHhcC--CCccCChHHHhhhcCCCCCCCCCCCChHHH
Q 042468 127 SVPASIDWRKK----GAVTGVKDQGQCGCCWAFSAVAAMEGINHITTR--KLTSLSEQELVDCDTSGEDQGCEGGLMDDA 200 (346)
Q Consensus 127 ~lP~~~Dwr~~----~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~--~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a 200 (346)
+||++||||++ +.|+||||||.||||||||++++||++++++++ ..++||+|+|+||.....+.||+||++..|
T Consensus 6 ~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a 85 (266)
T 3cbj_A 6 KLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEA 85 (266)
T ss_dssp CCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHHH
T ss_pred CCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHHH
Confidence 78999999987 789999999999999999999999999999875 479999999999986323689999999999
Q ss_pred HHHHHHhCCCCC-------CCCCCCc---------CCCCCcCCC---------CCC--C-----CceEeeeeEecCCChH
Q 042468 201 FEFIISNKGLAT-------EAKYPYK---------ASDGSCNKK---------EAN--P-----SAAKISGYEDVPSNNE 248 (346)
Q Consensus 201 ~~~~~~~~G~~~-------e~~~PY~---------~~~~~c~~~---------~~~--~-----~~~~i~~~~~~~~~~~ 248 (346)
++|+.++ |+++ |.+|||. +..+.|... ... . .......+..++ .++
T Consensus 86 ~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~~ 163 (266)
T 3cbj_A 86 WNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSE 163 (266)
T ss_dssp HHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECC-SCH
T ss_pred HHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeC-CCH
Confidence 9999875 9999 9999998 334556321 000 0 001112233455 578
Q ss_pred HHHHHHHH-cCCeEEEEEccCccccccCCCeEeCCCCC-CCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEe
Q 042468 249 AALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTGQCGT-ELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQR 326 (346)
Q Consensus 249 ~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 326 (346)
++|+++|+ +|||+++|++. ++|+.|++|||..+|.. .++|||+|||||++ +|++|||||||||++|||+|||||+|
T Consensus 164 ~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r 241 (266)
T 3cbj_A 164 KDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKILR 241 (266)
T ss_dssp HHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEEC
T ss_pred HHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEeccc-CCceEEEEEcCCCCccCCCCEEEEEc
Confidence 99999998 69999999998 68999999999987654 46999999999987 78999999999999999999999999
Q ss_pred cCCCCCCCcccccccceee
Q 042468 327 DIDAKEGLCGIAMQASYPT 345 (346)
Q Consensus 327 ~~~~~~~~Cgi~~~~~~p~ 345 (346)
+. |.|||++.+++++
T Consensus 242 g~----n~cgI~~~~~~~~ 256 (266)
T 3cbj_A 242 GQ----DHCGIESEVVAGI 256 (266)
T ss_dssp SS----CGGGTTTSCEECC
T ss_pred CC----CcccccCceEEEE
Confidence 86 4599999999875
No 37
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=1.2e-59 Score=428.95 Aligned_cols=210 Identities=30% Similarity=0.627 Sum_probs=183.1
Q ss_pred CCCceeeccCC---CCCCccCCCC---CCccHHHHHHHHHHHHHHHHhcC-C--CccCChHHHhhhcCCCCCCCCCCCCh
Q 042468 127 SVPASIDWRKK---GAVTGVKDQG---QCGCCWAFSAVAAMEGINHITTR-K--LTSLSEQELVDCDTSGEDQGCEGGLM 197 (346)
Q Consensus 127 ~lP~~~Dwr~~---~~v~pV~dQg---~cgsCwAfA~~~~~e~~~~~~~~-~--~~~lS~q~l~dc~~~~~~~gc~GG~~ 197 (346)
+||++||||++ ++|+|||||| .||||||||++++||++++++++ . .++||+|+|+||.. ..||+||++
T Consensus 35 ~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~---~~gC~GG~~ 111 (277)
T 1deu_A 35 DLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN---AGSCEGGND 111 (277)
T ss_dssp GSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS---SEETBEECH
T ss_pred cCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC---CCCCCCCCH
Confidence 79999999998 6799999999 99999999999999999999875 3 47999999999986 379999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcCCCCCcCC-C-------------CCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEE
Q 042468 198 DDAFEFIISNKGLATEAKYPYKASDGSCNK-K-------------EANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSV 262 (346)
Q Consensus 198 ~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~-~-------------~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v 262 (346)
..|++|+.++ |+++|++|||......|.. . ......+++..|..++ ++++|+++|+ +|||++
T Consensus 112 ~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV~v 188 (277)
T 1deu_A 112 LSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPISC 188 (277)
T ss_dssp HHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCEEE
Confidence 9999999865 9999999999988888873 1 0122356788888886 4778999887 799999
Q ss_pred EEEccCccccccCCCeEeCC-CCCCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCC-----CCCCCcc
Q 042468 263 AIDASGSDFQFYSSGVFTGQ-CGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDID-----AKEGLCG 336 (346)
Q Consensus 263 ~~~~~~~~f~~y~~gi~~~~-~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~-----~~~~~Cg 336 (346)
+|++. ++|+.|++|||..+ +...++|||+|||||++ +|++|||||||||++|||+|||||+|+.| +. ..||
T Consensus 189 ~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~-~~cg 265 (277)
T 1deu_A 189 GIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-DGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGAR-YNLA 265 (277)
T ss_dssp EECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGG-TBTT
T ss_pred EEecc-cccccCcCcEECCCCCCCcCCeEEEEEEeccc-CCccEEEEEeCCCCccCCCcEEEEEcCCCccccccc-ccce
Confidence 99998 68999999999987 55678999999999988 79999999999999999999999999975 10 1599
Q ss_pred cccccceee
Q 042468 337 IAMQASYPT 345 (346)
Q Consensus 337 i~~~~~~p~ 345 (346)
|+++++|++
T Consensus 266 Ie~~~~~~~ 274 (277)
T 1deu_A 266 IEEHCTFGD 274 (277)
T ss_dssp TTSCEEEEE
T ss_pred eccccEeec
Confidence 999999875
No 38
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=4.3e-59 Score=421.25 Aligned_cols=210 Identities=33% Similarity=0.666 Sum_probs=174.3
Q ss_pred CCCceeeccCC----CCCCccCCCCCCccHHHHHHHHHHHHHHHHhcC--CCccCChHHHhhhcCCCCCCCCCCCChHHH
Q 042468 127 SVPASIDWRKK----GAVTGVKDQGQCGCCWAFSAVAAMEGINHITTR--KLTSLSEQELVDCDTSGEDQGCEGGLMDDA 200 (346)
Q Consensus 127 ~lP~~~Dwr~~----~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~--~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a 200 (346)
+||++||||++ +.|+||||||.||||||||++++||++++++++ ..++||||+|+||... .+.||+||++..|
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a 80 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCES-CGLGCEGGILGPA 80 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTT-SBCTTBCBCHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcC-CCCCCCCCCHHHH
Confidence 68999999998 689999999999999999999999999999976 6899999999999864 3589999999999
Q ss_pred HHHHHHhCCCCCCCCC-------CCc---------CCCCCcCCC----------CCC---CCceE----eeeeEecCCCh
Q 042468 201 FEFIISNKGLATEAKY-------PYK---------ASDGSCNKK----------EAN---PSAAK----ISGYEDVPSNN 247 (346)
Q Consensus 201 ~~~~~~~~G~~~e~~~-------PY~---------~~~~~c~~~----------~~~---~~~~~----i~~~~~~~~~~ 247 (346)
++|++++ |+++|+.| ||. +..+.|... ... ..... ......++ .+
T Consensus 81 ~~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~ 158 (254)
T 3qsd_A 81 WDYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-ND 158 (254)
T ss_dssp HHHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SC
T ss_pred HHHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-Cc
Confidence 9999876 99999888 996 333445321 000 00000 11122444 47
Q ss_pred HHHHHHHHH-cCCeEEEEEccCccccccCCCeEeCCCC-CCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEE
Q 042468 248 EAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTGQCG-TELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQ 325 (346)
Q Consensus 248 ~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~~~~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~ 325 (346)
+++|+++|+ +|||+++|++. ++|++|++|||..++. ..++|||+|||||++ ++++|||||||||++||++|||||+
T Consensus 159 ~~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~ 236 (254)
T 3qsd_A 159 EKAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVE-NKAPYWLIANSWNEDWGENGYFRIV 236 (254)
T ss_dssp HHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeec-CCeeEEEEEeCCCCCcccCCeEEEE
Confidence 899999998 69999999998 7899999999998854 456999999999987 7899999999999999999999999
Q ss_pred ecCCCCCCCcccccccceee
Q 042468 326 RDIDAKEGLCGIAMQASYPT 345 (346)
Q Consensus 326 ~~~~~~~~~Cgi~~~~~~p~ 345 (346)
|+. |.|||++.++..+
T Consensus 237 rg~----n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 237 RGR----DECSIESEVTAGR 252 (254)
T ss_dssp CSS----CGGGTTSSEEEEE
T ss_pred cCC----CeecCCCceEeec
Confidence 997 4599999987643
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=1.3e-54 Score=394.63 Aligned_cols=210 Identities=27% Similarity=0.545 Sum_probs=164.6
Q ss_pred eeeccCC-CCCC--ccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCCCCCCChH-HHHHHHHH
Q 042468 131 SIDWRKK-GAVT--GVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMD-DAFEFIIS 206 (346)
Q Consensus 131 ~~Dwr~~-~~v~--pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~-~a~~~~~~ 206 (346)
-.|||++ |+++ ||||||.||||||||++++||++++++++..++||||+|+||+....+.||+||... .++.++.+
T Consensus 10 ~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~~ 89 (265)
T 2wbf_X 10 CNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIED 89 (265)
T ss_dssp BCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHHH
T ss_pred HHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHHH
Confidence 5799999 6877 999999999999999999999999999989999999999999875557899999654 55677776
Q ss_pred hCCCCCCCCCCCcCC--CCCcCCCCC----------------CCCceEeeeeEecCCC----h----HHHHHHHHH-cCC
Q 042468 207 NKGLATEAKYPYKAS--DGSCNKKEA----------------NPSAAKISGYEDVPSN----N----EAALMKAVA-NQP 259 (346)
Q Consensus 207 ~~G~~~e~~~PY~~~--~~~c~~~~~----------------~~~~~~i~~~~~~~~~----~----~~~i~~~l~-~gP 259 (346)
++|+++|++|||... .+.|..... ....+++.+|..++.. + +++|+++|+ +||
T Consensus 90 ~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~GP 169 (265)
T 2wbf_X 90 YGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKGS 169 (265)
T ss_dssp HCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcCC
Confidence 755999999999863 467865321 1223467777766531 2 478899998 699
Q ss_pred eEEEEEccCccccccC-CCeE-eCCCCC-CCCeEEEEEEeecc--CCC--ccEEEEEcCCCCCCCCCceEEEEecCCCCC
Q 042468 260 VSVAIDASGSDFQFYS-SGVF-TGQCGT-ELDHGVTAVGYGTA--DDG--TKYWLVKNSWGTTWGENGYIRMQRDIDAKE 332 (346)
Q Consensus 260 v~v~~~~~~~~f~~y~-~gi~-~~~~~~-~~~Hav~iVGyg~~--~~g--~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~ 332 (346)
|+++|++. +|..|+ +|++ ...|+. .++|||+|||||++ ++| ++|||||||||++|||+|||||+|+.+
T Consensus 170 V~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~--- 244 (265)
T 2wbf_X 170 VIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGP--- 244 (265)
T ss_dssp EEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCC---
T ss_pred EEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCC---
Confidence 99999986 576664 4433 234764 68999999999985 345 689999999999999999999998643
Q ss_pred CCccccc---ccceee
Q 042468 333 GLCGIAM---QASYPT 345 (346)
Q Consensus 333 ~~Cgi~~---~~~~p~ 345 (346)
|.|||+. .++||+
T Consensus 245 n~Cgi~~~~~~~~~~~ 260 (265)
T 2wbf_X 245 THCHFNFIHSVVIFNV 260 (265)
T ss_dssp TTCSSCSCCEEEEECE
T ss_pred CccCcceeEEEEeccc
Confidence 4599555 555543
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=6.2e-53 Score=387.95 Aligned_cols=235 Identities=20% Similarity=0.275 Sum_probs=178.4
Q ss_pred CeEEecccCCCCChHHHhcccCCCcCCCCcccCCCCcccccccCCCCCCceeeccCCCCCCccCCCCCCccHHHHHHHHH
Q 042468 81 PYKLGINEFADQTNEEFRAPRNGYKRRLPSVRSSETTDVSFRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAA 160 (346)
Q Consensus 81 s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~ 160 (346)
...-..|++.++..|.++.. +|+.++.+..+.. ...+......+||++||||+++ ||||||.||||||||++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~-lG~~p~~~d~rd~--~~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~a 86 (291)
T 3ois_A 13 GLVPRGSHMQTVLKRRKKSG-YGYIPDIADIRDF--SYTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAAA 86 (291)
T ss_dssp ----------CCCCCCCCTT-CCEECCCCCTTCC--BCCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHHH
T ss_pred CcccchhhHhHhhhcccccc-CCCCCCCCccccc--ccCCCccccccCCcceecccCC---CcccCCCCccHHHHHHHHH
Confidence 34457889999999999875 6777655443211 0000000012799999999984 9999999999999999999
Q ss_pred HHHHHHHhcCCCccCChHHHh--hhcCC-CC-CCCCCCCChHHHHHHHHHhCCCCCCCCCCCcCCC---CCcCCCC----
Q 042468 161 MEGINHITTRKLTSLSEQELV--DCDTS-GE-DQGCEGGLMDDAFEFIISNKGLATEAKYPYKASD---GSCNKKE---- 229 (346)
Q Consensus 161 ~e~~~~~~~~~~~~lS~q~l~--dc~~~-~~-~~gc~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~---~~c~~~~---- 229 (346)
+|+++. .++..+.||+|+|+ +|... .+ ..+|.||++..|++|+.++ |+++|++|||.+.. +.|....
T Consensus 87 lE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~~ 164 (291)
T 3ois_A 87 IQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAPA 164 (291)
T ss_dssp HHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCGG
T ss_pred HHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCccccccccccccccc
Confidence 999875 46777899999998 68642 12 3468899999999999876 99999999998763 3564410
Q ss_pred --C-------CCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCccccccCC--CeEeCC-CCC--CCCeEEEEE
Q 042468 230 --A-------NPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGSDFQFYSS--GVFTGQ-CGT--ELDHGVTAV 294 (346)
Q Consensus 230 --~-------~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~--gi~~~~-~~~--~~~Hav~iV 294 (346)
. ....+++.+|..++. ++++|+++|+ +|||+++|++. ++|+.|++ |||..+ |.. .++|||+||
T Consensus 165 ~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~iV 242 (291)
T 3ois_A 165 SKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLCV 242 (291)
T ss_dssp GSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEEE
T ss_pred cCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEEE
Confidence 0 123568899999984 8899999999 58999999998 78999998 999887 432 359999999
Q ss_pred EeeccCCCccEEEEEcCCCCCCCCCceEEEEecC
Q 042468 295 GYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDI 328 (346)
Q Consensus 295 Gyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~ 328 (346)
||| ++++|||||||||++||++|||||+|+.
T Consensus 243 Gy~---~~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 243 GYD---DEIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp EEE---TTTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred EEe---CCCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 998 4678999999999999999999999985
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=7.9e-42 Score=325.69 Aligned_cols=198 Identities=18% Similarity=0.303 Sum_probs=153.2
Q ss_pred CCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHh-cCCCccCCh----------------HHHhhhcCC---
Q 042468 127 SVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHIT-TRKLTSLSE----------------QELVDCDTS--- 186 (346)
Q Consensus 127 ~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~-~~~~~~lS~----------------q~l~dc~~~--- 186 (346)
..|..|+++....+|||+|||.||+|||||+++++|+.+.++ +++.+.||+ |+|+||...
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 357788888888899999999999999999999999999988 578899999 999999853
Q ss_pred ---------CCCCCCCCCChHHHHHHHHHhCCCCCCCCCCCcCCC---------------------------C------C
Q 042468 187 ---------GEDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASD---------------------------G------S 224 (346)
Q Consensus 187 ---------~~~~gc~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~---------------------------~------~ 224 (346)
..+.||+||.+..++.++.+ +|++++++|||.... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~k-yGl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEK-YGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHH-HCCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHH-cCccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 24689999999999999975 599999999998631 1 1
Q ss_pred ----------------c----------CCCCC----------CC-------Cce--EeeeeE------------------
Q 042468 225 ----------------C----------NKKEA----------NP-------SAA--KISGYE------------------ 241 (346)
Q Consensus 225 ----------------c----------~~~~~----------~~-------~~~--~i~~~~------------------ 241 (346)
| ..... ++ ... .+.+|.
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 4 11000 00 001 233333
Q ss_pred ---------------ecCCChH-HHHHHHHHc-CCeEEEEEccCccccccCCCeEeCC-C--------------------
Q 042468 242 ---------------DVPSNNE-AALMKAVAN-QPVSVAIDASGSDFQFYSSGVFTGQ-C-------------------- 283 (346)
Q Consensus 242 ---------------~~~~~~~-~~i~~~l~~-gPv~v~~~~~~~~f~~y~~gi~~~~-~-------------------- 283 (346)
.+|.... +.++.+|+. |||.+++++.. +.++++|||..+ |
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 2332122 344567774 89999999983 445699999876 4
Q ss_pred --CCCCCeEEEEEEee--ccCCCc-cEEEEEcCCCCCCCCCceEEEEec
Q 042468 284 --GTELDHGVTAVGYG--TADDGT-KYWLVKNSWGTTWGENGYIRMQRD 327 (346)
Q Consensus 284 --~~~~~Hav~iVGyg--~~~~g~-~ywivkNSWG~~WG~~Gy~~i~~~ 327 (346)
....+|||+||||| .+.+|+ .|||||||||++||++|||+|+++
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh
Confidence 13579999999999 765687 999999999999999999999985
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=7.4e-41 Score=319.34 Aligned_cols=207 Identities=18% Similarity=0.215 Sum_probs=144.7
Q ss_pred CCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHh-cCCCccCCh----------------HHHhhhcCCC---
Q 042468 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHIT-TRKLTSLSE----------------QELVDCDTSG--- 187 (346)
Q Consensus 128 lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~-~~~~~~lS~----------------q~l~dc~~~~--- 187 (346)
.|..|+++..+.+|||||||.||+|||||+++++|+.++++ +++.++||+ |+|+||....
T Consensus 53 ~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~~ 132 (457)
T 2e01_A 53 DNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDS 132 (457)
T ss_dssp CCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTS
T ss_pred CCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCcccc
Confidence 46678888888899999999999999999999999999988 788899999 7889997521
Q ss_pred -------CCCCCCCCChHHHHHHHHHhCCCCCCCCCCC-cCC---------------------------------C----
Q 042468 188 -------EDQGCEGGLMDDAFEFIISNKGLATEAKYPY-KAS---------------------------------D---- 222 (346)
Q Consensus 188 -------~~~gc~GG~~~~a~~~~~~~~G~~~e~~~PY-~~~---------------------------------~---- 222 (346)
.+.||+||.+..++.++.+ +|+++|++||| ... .
T Consensus 133 r~v~~l~~~~gcdGG~~~~a~~~i~k-yGivpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~~ 211 (457)
T 2e01_A 133 RLVQYLLAAPTEDGGQYSMFLNLVKK-YGLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIVT 211 (457)
T ss_dssp HHHHHHHHCTTCSCBCHHHHHHHHHH-HCCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHHH
T ss_pred hhhhhhccCCCCCCCCHHHHHHHHHH-cCccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHHH
Confidence 3689999999999999975 59999999999 310 0
Q ss_pred -----------------CCcCC----CC-----C----------CC---------------------------CceEe--
Q 042468 223 -----------------GSCNK----KE-----A----------NP---------------------------SAAKI-- 237 (346)
Q Consensus 223 -----------------~~c~~----~~-----~----------~~---------------------------~~~~i-- 237 (346)
+.|+. .. . .+ ..+.+
T Consensus 212 ~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve~ 291 (457)
T 2e01_A 212 LREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKIDR 291 (457)
T ss_dssp HHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEec
Confidence 01111 00 0 00 00000
Q ss_pred ---------eeeEecCCCh-HHHHHHHHH-cCCeEEEEEccCccccccCCCeEeCCC---------------------CC
Q 042468 238 ---------SGYEDVPSNN-EAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTGQC---------------------GT 285 (346)
Q Consensus 238 ---------~~~~~~~~~~-~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~~~~---------------------~~ 285 (346)
..|..+|.+. .+.++.+|+ .|||.+++++. .+.+|++|||...| ..
T Consensus 292 ~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s 369 (457)
T 2e01_A 292 LGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHES 369 (457)
T ss_dssp CCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSC
T ss_pred cCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCCC
Confidence 0133444211 144556777 47999999998 47788999997654 24
Q ss_pred CCCeEEEEEEeeccCCCc--cEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 042468 286 ELDHGVTAVGYGTADDGT--KYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPT 345 (346)
Q Consensus 286 ~~~Hav~iVGyg~~~~g~--~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 345 (346)
..+|||+|||||.+.+|+ .|||||||||++||++|||+|+++ .|..++++++
T Consensus 370 ~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~--------wf~ey~~~iv 423 (457)
T 2e01_A 370 LMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK--------YFEEYCFQIV 423 (457)
T ss_dssp CCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH--------HHHHHEEEEE
T ss_pred CCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh--------hHhhccEEEE
Confidence 579999999999876788 899999999999999999999985 3666555544
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=8.2e-36 Score=278.71 Aligned_cols=183 Identities=28% Similarity=0.390 Sum_probs=135.2
Q ss_pred CCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCC----------CCCCCCCCCChHHHHHHHHHhC
Q 042468 139 AVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTS----------GEDQGCEGGLMDDAFEFIISNK 208 (346)
Q Consensus 139 ~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~----------~~~~gc~GG~~~~a~~~~~~~~ 208 (346)
.++||||||+||+|||||+++++|+.+.+++++.++||+|+|++|+.. ..+.||+||.+..|+.|+.+.
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 389999999999999999999999999999999999999999999741 235799999999999999865
Q ss_pred CCCCCCCCC------CcCCCC-------------CcCC--CCC------------------------CCCce--------
Q 042468 209 GLATEAKYP------YKASDG-------------SCNK--KEA------------------------NPSAA-------- 235 (346)
Q Consensus 209 G~~~e~~~P------Y~~~~~-------------~c~~--~~~------------------------~~~~~-------- 235 (346)
|+++|++|| +...+. .+.. ... .+..+
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 221100 0000 000 00000
Q ss_pred ----------EeeeeE----------------------------ecCCChHHHHH----HHHHcC-CeEEEEEccCcccc
Q 042468 236 ----------KISGYE----------------------------DVPSNNEAALM----KAVANQ-PVSVAIDASGSDFQ 272 (346)
Q Consensus 236 ----------~i~~~~----------------------------~~~~~~~~~i~----~~l~~g-Pv~v~~~~~~~~f~ 272 (346)
.+..|. ++| .+.|+ .+|..| ||..+-+|....|.
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp---~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~ 256 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLP---LDEFMEVFDNAINTGYTIAWGSDVSESGFT 256 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECC---HHHHHHHHHHHHHTTCCEEEEEECCSTTBC
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcC---HHHHHHHHHHHHHcCCcEEEEcccCccccC
Confidence 011111 222 34444 445566 99999999954555
Q ss_pred ccCCCeEeCC--C---------------------------------------------CCCCCeEEEEEEeeccCCCccE
Q 042468 273 FYSSGVFTGQ--C---------------------------------------------GTELDHGVTAVGYGTADDGTKY 305 (346)
Q Consensus 273 ~y~~gi~~~~--~---------------------------------------------~~~~~Hav~iVGyg~~~~g~~y 305 (346)
+.||...+ . .+..+|||+|||||.+++|++|
T Consensus 257 --~~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~y 334 (383)
T 3pw3_A 257 --RDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEY 334 (383)
T ss_dssp --TTSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEE
T ss_pred --CCceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceE
Confidence 88887322 0 0234799999999987678999
Q ss_pred EEEEcCCCCCCCCCceEEEEec
Q 042468 306 WLVKNSWGTTWGENGYIRMQRD 327 (346)
Q Consensus 306 wivkNSWG~~WG~~Gy~~i~~~ 327 (346)
|+||||||++||++||++|+++
T Consensus 335 w~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 335 YMVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp EEEECSBCSCSTTTTEEEEEHH
T ss_pred EEEEeCCCCCCCcCCeEEecHH
Confidence 9999999999999999999975
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.77 E-value=9.3e-19 Score=134.48 Aligned_cols=76 Identities=32% Similarity=0.621 Sum_probs=69.5
Q ss_pred cCChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccCCCCCeEEecccCCCCChHHHhcccCCCcC
Q 042468 29 TLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKR 106 (346)
Q Consensus 29 ~~~~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~ 106 (346)
+.++..+...|++|+++|+|.|.+.+|+..|+.||++|+++|++||+ .+.+|++|+|+|+|||.+||++.++|.+.
T Consensus 15 ~~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~--~~~sy~lglN~FaDLT~eEF~~~~lg~~~ 90 (106)
T 3f75_P 15 EWKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQ--QGYSYSLKMNHFGDLSRDEFRRKYLGFKK 90 (106)
T ss_dssp -CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHT--SCCSEEECCCTTTTCCHHHHHHHSCCBCC
T ss_pred ccCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHh--cCCCeeeCCcccccCCHHHHHHHHcCCCC
Confidence 34567899999999999999999988999999999999999999998 37899999999999999999998888765
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.72 E-value=6.3e-18 Score=124.19 Aligned_cols=69 Identities=32% Similarity=0.505 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccC--CCCCeEEecccCCCCChHHHhcccCCCcC
Q 042468 36 NERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKA--RNKPYKLGINEFADQTNEEFRAPRNGYKR 106 (346)
Q Consensus 36 ~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~--~~~s~~~g~N~FsD~t~eEf~~~~~~~~~ 106 (346)
+..|++|+.+|+|+|.+.+|+..| .||++|++.|++||++. +..+|++|+|+|+|||.+|| +.++|.+.
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~~ 77 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKKV 77 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSCC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCCC
Confidence 468999999999999988899999 99999999999999832 46789999999999999999 77777554
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=96.89 E-value=0.023 Score=46.43 Aligned_cols=129 Identities=17% Similarity=0.203 Sum_probs=87.5
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHh--------cCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHhCCCCCCCC
Q 042468 144 KDQGQCGCCWAFSAVAAMEGINHIT--------TRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAK 215 (346)
Q Consensus 144 ~dQg~cgsCwAfA~~~~~e~~~~~~--------~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~~G~~~e~~ 215 (346)
..||.-+=|-+|+.++.|-+..... ..-...+|+|+|.+ .|..+...++|+.. .|..+.
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~----------t~~~~~q~Iky~~s-~G~~~~-- 91 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN----------CATFPNQMIEYGKS-QGRDIH-- 91 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGG----------CCBCHHHHHHHHHH-TTCCCE--
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh----------cCCCHHHHHHHHHH-cCcChh--
Confidence 3699999999999999887654211 11246788888876 35578899999874 352210
Q ss_pred CCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCccccccCCCeEeCCCCCCCCeEEEEE
Q 042468 216 YPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAV 294 (346)
Q Consensus 216 ~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~~Hav~iV 294 (346)
. .... -+.+++++.+. +-|+.+...-..+ .......+||++||
T Consensus 92 -------------------~----~nr~--ls~neV~~~i~~Nk~I~v~~~~v~e-----------~~~~~~~gHA~av~ 135 (183)
T 1pxv_A 92 -------------------Y----QEGV--PSYNQVDQLTKDNVGIMILAQSVSQ-----------NPNDPHLGHALAVV 135 (183)
T ss_dssp -------------------E----EESC--CCHHHHHHHHHTTCCEEEEEECCCS-----------STTSCCCEEEEEEE
T ss_pred -------------------H----hcCC--CCHHHHHHHHhcCCcEEEEcccccc-----------CCCCccCceeEEEE
Confidence 0 0011 25677888888 4699877653311 22335679999999
Q ss_pred EeeccCCCccEEEEEcCCCCCCCCCceEEEEec
Q 042468 295 GYGTADDGTKYWLVKNSWGTTWGENGYIRMQRD 327 (346)
Q Consensus 295 Gyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 327 (346)
||-.- ++.++.+|=|=|-. |++-++.+
T Consensus 136 Gya~~-~~~~~y~~WNPW~~-----~~~~~~a~ 162 (183)
T 1pxv_A 136 GNAKI-NDQEKLIYWNPWDT-----ELSIQDAD 162 (183)
T ss_dssp EEEEE-TTEEEEEEECTTCS-----SCEEEETT
T ss_pred eeeec-CCCeEEEEeCCccC-----CcEeecCC
Confidence 99887 47889999998854 67777655
No 47
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=96.85 E-value=0.027 Score=50.94 Aligned_cols=129 Identities=18% Similarity=0.247 Sum_probs=86.1
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHH--------hcCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHhCCCCCCCC
Q 042468 144 KDQGQCGCCWAFSAVAAMEGINHI--------TTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAK 215 (346)
Q Consensus 144 ~dQg~cgsCwAfA~~~~~e~~~~~--------~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~~G~~~e~~ 215 (346)
..||.-+=|-+||.+++|-+.... .+.-...+|+++|.+ .|..+...++|+. .+|...
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~----------ts~~~~q~Iky~q-syG~~~--- 266 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN----------CATFPNQMIEYGK-SQGRDI--- 266 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGG----------CCCCHHHHHHHHH-HTTEEE---
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh----------cCCCHHHHHHHHH-HhCcch---
Confidence 469999999999999988764321 111245688888876 3557888999987 445321
Q ss_pred CCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCccccccCCCeEeCCCCCCCCeEEEEE
Q 042468 216 YPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAV 294 (346)
Q Consensus 216 ~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~~Hav~iV 294 (346)
.-....+ +.+.+++.+. +.|+.+.+....+. ..+...+|||+||
T Consensus 267 ----------------------~~~n~~l--s~deVk~~id~Nk~I~v~~~~v~~~-----------~n~~~~gHAlavv 311 (367)
T 1x9y_A 267 ----------------------HYQEGVP--SYNQVDQLTKDNVGIMILAQSVSQN-----------PNDPHLGHALAVV 311 (367)
T ss_dssp ----------------------EEEESCC--CHHHHHHHHHTTCCEEEEEEETTSC-----------SSSCCCSEEEEEE
T ss_pred ----------------------hhhcCCC--CHHHHHHHHhcCCcEEEEccccccC-----------CCCccCceeEEEE
Confidence 1111122 4567778887 57999888754111 1234679999999
Q ss_pred EeeccCCCccEEEEEcCCCCCCCCCceEEEEec
Q 042468 295 GYGTADDGTKYWLVKNSWGTTWGENGYIRMQRD 327 (346)
Q Consensus 295 Gyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 327 (346)
||-... +.+|.++=|=|-. +++-++..
T Consensus 312 GyA~~~-~~~~y~~WNPW~~-----~~~~~sa~ 338 (367)
T 1x9y_A 312 GNAKIN-DQEKLIYWNPWDT-----ELSIQDAD 338 (367)
T ss_dssp EEEEET-TEEEEEEECTTCS-----SCEEEETT
T ss_pred eccccC-CCcEEEEecCccC-----CceeecCC
Confidence 997764 8889999888854 36665543
No 48
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=96.77 E-value=0.033 Score=45.41 Aligned_cols=121 Identities=15% Similarity=0.252 Sum_probs=82.0
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHh--------cCCCccCChHHHhhhcCCCCCCCCCCCChHHHHHHHHHhCCCCCCCC
Q 042468 144 KDQGQCGCCWAFSAVAAMEGINHIT--------TRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAK 215 (346)
Q Consensus 144 ~dQg~cgsCwAfA~~~~~e~~~~~~--------~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~~G~~~e~~ 215 (346)
..||.-+=|-+||.+++|-+..... +.-...+|+++|..+ |..+...++|+.+. |-..
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~----------~~t~~e~iky~~s~-g~~~--- 81 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT----------GLTPREMIYFGQTQ-GRSP--- 81 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC----------CCCHHHHHHHHHHT-TCCC---
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc----------CCCHHHHHHHHHHc-CCCh---
Confidence 3699999999999999987654221 122467999999854 34677889998755 3210
Q ss_pred CCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHc-CCeEEEEEccCccccccCCCeEeCCCCCCCCeEEEEE
Q 042468 216 YPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVAN-QPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAV 294 (346)
Q Consensus 216 ~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~-gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~~Hav~iV 294 (346)
+. .... -+.+++++.+.+ -|+.+..+-. +. +.....+||++||
T Consensus 82 ----------~~------------~n~~--ls~~eV~~~~~~nk~i~i~~~~v-e~-----------~~~~~~gHAlav~ 125 (174)
T 1cv8_A 82 ----------QL------------LNRM--TTYNEVDNLTKNNKGIAILGSRV-ES-----------RNGMHAGHAMAVV 125 (174)
T ss_dssp ----------EE------------ESSC--CCHHHHHHHHHTTCCEEEEEEES-SC-----------BTTBCCEEEEEEE
T ss_pred ----------hh------------hcCC--CCHHHHHHHHhcCCceEEEcccc-cC-----------CCCCCCceeEEEE
Confidence 00 0001 246777888884 5887766543 11 1224678999999
Q ss_pred EeeccCCCccEEEEEcCCCC
Q 042468 295 GYGTADDGTKYWLVKNSWGT 314 (346)
Q Consensus 295 Gyg~~~~g~~ywivkNSWG~ 314 (346)
||-.-.+|.+|.++=|=|-.
T Consensus 126 Gy~~~~ng~~~y~~WNPW~~ 145 (174)
T 1cv8_A 126 GNAKLNNGQEVIIIWNPWDN 145 (174)
T ss_dssp EEEEETTSCEEEEEECTTCS
T ss_pred eeeeecCCceEEEEeCCccC
Confidence 99986678899999998853
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=87.20 E-value=2.5 Score=36.57 Aligned_cols=54 Identities=26% Similarity=0.411 Sum_probs=33.4
Q ss_pred ecCCChHHHHHHHHHcC-CeEEEEEccC-----cccccc--CCCeEeCCCCCCCCeEEEEEEeec
Q 042468 242 DVPSNNEAALMKAVANQ-PVSVAIDASG-----SDFQFY--SSGVFTGQCGTELDHGVTAVGYGT 298 (346)
Q Consensus 242 ~~~~~~~~~i~~~l~~g-Pv~v~~~~~~-----~~f~~y--~~gi~~~~~~~~~~Hav~iVGyg~ 298 (346)
.++..+.++|++.|.+| ||.|-....- ..|..+ .+|-... ...+|+|+|+||+.
T Consensus 126 dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~---~~~~H~VVl~GYd~ 187 (236)
T 3erv_A 126 DLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI---TYNEHCVVLIGYDQ 187 (236)
T ss_dssp ECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE---CTTEEEEEEEEECS
T ss_pred ecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee---ccCCeEEEEEEEeC
Confidence 45556889999999987 9998775420 011111 1222111 24579999999974
No 50
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=66.76 E-value=12 Score=33.77 Aligned_cols=59 Identities=15% Similarity=0.340 Sum_probs=36.3
Q ss_pred HHHHHHHHc-CCeEEEEEccCccccccCCCeEeCCCCCCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEe
Q 042468 249 AALMKAVAN-QPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQR 326 (346)
Q Consensus 249 ~~i~~~l~~-gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 326 (346)
+.|+..|.+ .||.+.-.-. .. . ...++||.+|=||.. .+||-+==.||.. .+|||.+..
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~--~~------~-----~~~~GHafV~DGY~~----~~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSP--GS------M-----GQDAGHAFVIDGYNK----AGLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECT----TSCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEecC--CC------C-----CCCCceEEEEccccC----CCeEEEecCCCCC--CCceEeccC
Confidence 467788885 5987643221 11 0 135799999999964 3677666555422 389999863
No 51
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=66.00 E-value=14 Score=34.03 Aligned_cols=54 Identities=22% Similarity=0.397 Sum_probs=35.9
Q ss_pred HHHHHHHHc-CCeEEEEEccCccccccCCCeEeCCCCCCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEe
Q 042468 249 AALMKAVAN-QPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQR 326 (346)
Q Consensus 249 ~~i~~~l~~-gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 326 (346)
+.|+..|.+ .||.+.-.-. .++||.+|=||+. .+||-|==.||.. .+|||.+..
T Consensus 290 ~~i~~eL~~~rPV~~~G~~~------------------~gGHAfV~DGy~~----~~~~H~NwGWgG~--~nGyy~l~~ 344 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGVGK------------------VGGHAFVIDGADG----RNFYHVNWGWGGV--SDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHTTCCEEEEEEET------------------TEEEEEEEEEECS----SSEEEEECSSTTT--TCEEEESCC
T ss_pred HHHHHHHHcCCCEEEEeecC------------------CCceEEEECcccC----CCeEEEEeCcCCC--CCcceeccC
Confidence 567778885 5987643211 2699999999963 4576665444422 589999863
No 52
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=57.52 E-value=16 Score=31.89 Aligned_cols=53 Identities=28% Similarity=0.584 Sum_probs=36.8
Q ss_pred HHHHHHHHHc-CCeEEEEEccCccccccCCCeEeCCCCCCCCeEEEEEEeeccCCCccEEEEEcCCCCCCC--CCceEEE
Q 042468 248 EAALMKAVAN-QPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWG--ENGYIRM 324 (346)
Q Consensus 248 ~~~i~~~l~~-gPv~v~~~~~~~~f~~y~~gi~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG--~~Gy~~i 324 (346)
.+.|+..|.+ .||.+.-.- ..++||.+|=||+. .+|+-|- || || .+|||.+
T Consensus 171 ~~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~----~~~~H~N--wG--WgG~~nGYy~l 224 (261)
T 4d8b_A 171 EAQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADG----RNFYHVN--WG--WGGVSDGFFRL 224 (261)
T ss_dssp HHHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEES----SSCEEEE--CS--STTTTCEEECT
T ss_pred HHHHHHHHHcCCCEEEEeec------------------CCCceEEEEccccc----CCEEEEE--cC--CCCCCCceeec
Confidence 3567888886 599876521 14689999999974 3566654 55 44 5899998
Q ss_pred Ee
Q 042468 325 QR 326 (346)
Q Consensus 325 ~~ 326 (346)
..
T Consensus 225 ~~ 226 (261)
T 4d8b_A 225 DA 226 (261)
T ss_dssp TC
T ss_pred cc
Confidence 53
No 53
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=34.76 E-value=39 Score=19.56 Aligned_cols=18 Identities=22% Similarity=0.296 Sum_probs=12.7
Q ss_pred hhhhHHHHHHHHHHHHHH
Q 042468 3 MILLENKLVLAAILVLGV 20 (346)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~ 20 (346)
++++.++++|.+.+|+..
T Consensus 16 SLy~GLLlifvlavlFss 33 (37)
T 3arc_L 16 SLYLGLLLILVLALLFSS 33 (37)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhh
Confidence 567777777777777654
No 54
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=25.50 E-value=59 Score=29.38 Aligned_cols=38 Identities=21% Similarity=0.498 Sum_probs=0.0
Q ss_pred CeEEEEEEeecc---CCCccEEEEEcCCC-CCCC-------------------------CCceEEEE
Q 042468 288 DHGVTAVGYGTA---DDGTKYWLVKNSWG-TTWG-------------------------ENGYIRMQ 325 (346)
Q Consensus 288 ~Hav~iVGyg~~---~~g~~ywivkNSWG-~~WG-------------------------~~Gy~~i~ 325 (346)
+||-.|++.... ..+.....|||-|| ..|- ++|-|||+
T Consensus 246 ~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs 312 (339)
T 2r9f_A 246 GHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMS 312 (339)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CceEEEeEEEEEecCCCceEEEEEeCCCCCccccCCCCcCCccccccCHHHHHHhCCCCCCCEEEEE
No 55
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=23.76 E-value=25 Score=24.26 Aligned_cols=26 Identities=12% Similarity=0.041 Sum_probs=19.6
Q ss_pred CCccCCCCCCccHHHHHHHHHHHHHHHH
Q 042468 140 VTGVKDQGQCGCCWAFSAVAAMEGINHI 167 (346)
Q Consensus 140 v~pV~dQg~cgsCwAfA~~~~~e~~~~~ 167 (346)
+--|+=||.|++| ...-..+|..++.
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~ 62 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLRE 62 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHH
Confidence 5678899999999 3444678877764
Done!