BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042480
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q949S5|P2B11_ARATH F-box protein PP2-B11 OS=Arabidopsis thaliana GN=PP2B11 PE=1 SV=1
Length = 257
Score = 176 bits (446), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 128/224 (57%), Gaps = 11/224 (4%)
Query: 5 NALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSS 64
N LP +CI+ I+SLTTP D CRL+AVS IF+SAA SD VW FLP+D+ + + +
Sbjct: 2 NNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFP---AGFAAPAG 58
Query: 65 LSTSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWT 124
L T +K L+F L P+ IN +SF+LE+++G KCYM+ AR L I WG +W W
Sbjct: 59 LPT---RKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWI 115
Query: 125 SLSKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGF-----GSTL 179
SL +RF EVAEL+ W+ E+ +I +LS+ T YAAY VFK+ S GF S +
Sbjct: 116 SLPNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFRQPVETSLV 175
Query: 180 LASGVYVEGINDEERQGLFLDPSRNTPQLFHDRRDGWMEIEMAD 223
LA + + L D Q RRDGW E+E+
Sbjct: 176 LADTESTDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQ 219
>sp|Q3E6P4|FB95_ARATH F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2
SV=1
Length = 320
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 133/226 (58%), Gaps = 13/226 (5%)
Query: 5 NALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSS 64
+ LP +CIS+IIS T+PRDAC A+VS F+SA SD VW+KFLP +Y+ ++S S +S
Sbjct: 62 DVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRVFAS 121
Query: 65 LSTSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWT 124
KK+LYF LCH PV I + SF LEK +GK+C M+ ++ L I WGS+ +W+W
Sbjct: 122 ------KKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWI 175
Query: 125 SLSKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGV 184
S+ +SRF ++AEL+ +FE+ + R+LS T Y+AY+VFK G G + G+
Sbjct: 176 SIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGL 235
Query: 185 YVEGINDEERQGLFLDPSRNTPQLF-------HDRRDGWMEIEMAD 223
+ G +R F+ P + R DGWME E+ +
Sbjct: 236 GLVGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWMEAELGE 281
>sp|Q9ZVQ6|P2B10_ARATH F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1
Length = 272
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 128/222 (57%), Gaps = 9/222 (4%)
Query: 5 NALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSS 64
++ P +CIS+IIS T PRDAC A VS F+S SD++WEKFLP+DY+ +I S SS
Sbjct: 15 DSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRVFSS 74
Query: 65 LSTSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWT 124
KK+LYF LC+ PV ++ S LEK +GK+C M+ A L I WG +W+W
Sbjct: 75 ------KKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWI 128
Query: 125 SLSKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGV 184
+ +SRF +VA+L +FE+ R TR+LS RT Y+AY+VFK GF + + + V
Sbjct: 129 PIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAV 188
Query: 185 YVEGINDEERQGLFLDPSRNTPQLF---HDRRDGWMEIEMAD 223
V G R F + R + R DGWMEIE+ +
Sbjct: 189 GVVGQEPSRRLICFSEAIRRGRRNVVKPKQREDGWMEIELGE 230
>sp|Q9ZVR5|PP2B2_ARATH Putative F-box protein PP2-B2 OS=Arabidopsis thaliana GN=PP2B2 PE=4
SV=2
Length = 310
Score = 171 bits (432), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 131/225 (58%), Gaps = 14/225 (6%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS 66
LP +CIS+IIS T+PRDAC A+VS F+SA +SD VW+KFLPSDY ++ S SS
Sbjct: 50 LPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSRVFSS-- 107
Query: 67 TSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGA-RGLCIEWGSTANFWKWTS 125
KK+LYF +C PV + + SF LEKE GKKC+M+ + + I W ST +W+W S
Sbjct: 108 ----KKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWIS 163
Query: 126 LSKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGVY 185
+ ++RF EV EL+ +FEV + T+ LS T Y+AY+VFK G + + V
Sbjct: 164 IPEARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVG 223
Query: 186 VEGINDEERQGLFLDPS-----RNTPQLFH--DRRDGWMEIEMAD 223
+ G +R F+ PS R T + R+DGWME E+
Sbjct: 224 LVGQESSQRHIYFVGPSDQRRDRETRDVTRPTKRKDGWMEAELGQ 268
>sp|Q9FLU7|P2B12_ARATH Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12
PE=4 SV=1
Length = 251
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 126/219 (57%), Gaps = 14/219 (6%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS 66
LP ECI+ +IS T+P DACR++AVS + +SAADS+ WE+FLPSDY++ I NS+S S
Sbjct: 6 LPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNSLSRFS-- 63
Query: 67 TSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWTSL 126
K L+ C P+ I + SF +EK +GKKC+M+ AR L I W + FW W S+
Sbjct: 64 ----NKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSI 119
Query: 127 SKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGVYV 186
SRF EVA L+ +FE+ +I T +LS TNY+AYLVFK + FG L V
Sbjct: 120 PDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFK-EQEMGSFGFESLPLEVSF 178
Query: 187 EGINDE--ERQGLFLDPSRNTPQLFHDRRDGWMEIEMAD 223
E + +FL R DGW+EIE+ +
Sbjct: 179 RSTRTEVYNNRRVFLKSGTQ-----ESREDGWLEIELGE 212
>sp|Q9ZVQ8|PP2B8_ARATH Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=4
SV=1
Length = 305
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 132/229 (57%), Gaps = 16/229 (6%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS 66
LP EC+S I+S T+P+DAC LA+VS F SA SD+VWEKF+P +Y+ +IS S + LS
Sbjct: 39 LPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFKFLS 98
Query: 67 TSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWTSL 126
KK+LYF LC V I++ S +EK K+C M+ A L I WG++ W+W
Sbjct: 99 ----KKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPD 154
Query: 127 SKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGVYV 186
++RF VAEL+ FE+ RI +R++S +T Y+AY+V+K GF + + V V
Sbjct: 155 PQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGFENVAVEVVVGV 214
Query: 187 EGINDEE--RQGLFLDPSRNTPQLFHD----------RRDGWMEIEMAD 223
G + EE R+ + D + + D R+DGWMEI++ +
Sbjct: 215 VGQDLEESCRRYICFDETMDEQFRRRDRGKNLVKPERRKDGWMEIKIGE 263
>sp|Q9FV02|SKIP3_ARATH F-box protein SKIP3 OS=Arabidopsis thaliana GN=SKIP3 PE=1 SV=2
Length = 294
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 126/232 (54%), Gaps = 25/232 (10%)
Query: 5 NALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSS 64
++LP CIS+IIS T+P DAC AAVS IF+SA SD+VWEKFLP+DY+ +I+ S SS
Sbjct: 25 DSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLITPSRVFSS 84
Query: 65 LSTSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCI-EWGSTANFWKW 123
KK+LYF LC+ P+ I + MS LEK +GK+C M+ A + + + + W
Sbjct: 85 ------KKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLSATAMNLSSMADMSQRFLW 138
Query: 124 TSLSKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASG 183
+SRF VA L + FE N R+ TR+LS RT Y+ Y+VFK + GF G
Sbjct: 139 IPCPESRFETVAALREAYRFEFNCRMNTRVLSLRTRYSVYIVFKKADNWCGF------KG 192
Query: 184 VYVE---GINDEER---------QGLFLDPSRNTPQLFHDRRDGWMEIEMAD 223
V +E GI EE G R R DGWME E+ +
Sbjct: 193 VSIEAVVGIVGEESFRSFICFDTHGKGQARKRKVVAKPELREDGWMETEIGE 244
>sp|Q6NPT8|PP2B1_ARATH F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP2B1 PE=1 SV=1
Length = 336
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 111/181 (61%), Gaps = 7/181 (3%)
Query: 5 NALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSS 64
+ALP +CIS +IS T+PRDAC +A+VS KSAA SDLVWE FLPS+Y ++ S
Sbjct: 33 DALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQS----- 87
Query: 65 LSTSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWT 124
+ L KK+++ L V + N SF +EK +GKKCYM+ A L I WG + +WKW
Sbjct: 88 -ANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWI 146
Query: 125 SLSKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTD-GFGSTLLASG 183
++ +S+F +VAEL +FEV +I +LS T+Y+ Y+VFK GF + +G
Sbjct: 147 TVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAG 206
Query: 184 V 184
V
Sbjct: 207 V 207
>sp|Q9ZVR0|PP2B6_ARATH Putative F-box protein PP2-B6 OS=Arabidopsis thaliana GN=PP2B6 PE=4
SV=1
Length = 307
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 124/227 (54%), Gaps = 15/227 (6%)
Query: 5 NALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSS 64
+ LP +CIS+IIS T+PRD C A+VS F A D +WEKFLPS+Y+ +I SS
Sbjct: 46 DDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLIPPWRVFSS 105
Query: 65 LSTSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWT 124
KKDLYF LC+ PV + + SF LE +GKKC ++ A+ L I G+ +W+W
Sbjct: 106 ------KKDLYFTLCYDPVLVEDGKKSFWLETASGKKCVLLAAKELWITGGNNPEYWQWI 159
Query: 125 SLSKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGV 184
L +S F +V EL+ F++ + T+ILS T+Y+ Y+V+K G + GV
Sbjct: 160 ELCESSFEKVPELLNNRSFQMGGSMSTQILSLGTHYSVYIVYKIKDERHGLRDLPIQVGV 219
Query: 185 YVEGINDEERQGLFLDPSRNTPQLF--------HDRRDGWMEIEMAD 223
+G + +Q + D S + + + R DGWME E+ D
Sbjct: 220 GFKG-QEMPKQFICFDESTDKTKEWPKKKLMKSKKRGDGWMEAEIGD 265
>sp|O80494|P2B15_ARATH F-box protein PP2-B15 OS=Arabidopsis thaliana GN=PP2B15 PE=2 SV=2
Length = 289
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 128/243 (52%), Gaps = 31/243 (12%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS 66
LP C++ I+S TTP D AAVS +F+ A DSD VWEKFLP+DY +IS S +
Sbjct: 3 LPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRIF 62
Query: 67 TSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWTSL 126
+S KK+LY LC + I+N F +EK +GK Y++ +R L I W ++W W+
Sbjct: 63 SS--KKELYRCLCE-SILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPR 119
Query: 127 SKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGVYV 186
S SRF E +L+ + E+ +I+T LS TNY AYL+ K ++ +G L+ + +
Sbjct: 120 SDSRFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAYLIMKV--TSRAYGLDLVPAETSI 177
Query: 187 EGINDEER-QGLFLDPSRNTPQ----LFHDRR---------------------DGWMEIE 220
+ N E++ + +L N Q +F+ +R DGWMEIE
Sbjct: 178 KVGNGEKKIKSTYLSCLDNKKQQMERVFYGQREQRMATHEVVRSHRREPEVRDDGWMEIE 237
Query: 221 MAD 223
+ +
Sbjct: 238 LGE 240
>sp|Q9ZVQ9|PP2B7_ARATH F-box protein PP2-B7 OS=Arabidopsis thaliana GN=PP2B7 PE=2 SV=1
Length = 307
Score = 137 bits (345), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 122/236 (51%), Gaps = 37/236 (15%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS 66
LP ECIS IIS T+PRDAC A VS F+SA SD+VWEKF+P +Y+ ++S S SS
Sbjct: 43 LPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLSRSQHFSS-- 100
Query: 67 TSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWTSL 126
KK+L+F LC V IN +EK TGK+C M+ A L + ST + WKW +
Sbjct: 101 ----KKELFFALCDESVLINVSKKDLWIEKATGKRCMMLSASALNL---STHHTWKWITN 153
Query: 127 SKSRFPE-VAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGVY 185
S + E V EL+ +FE+ R TR LS RT Y+ Y+VF GF + + V
Sbjct: 154 PVSAWLETVPELLTTRWFEIRCRTNTRFLSPRTRYSVYIVFLKADICYGFAYVAMEAVVR 213
Query: 186 VEGINDEE------------------RQGLFLDPSRNTPQLFHDRRDGWMEIEMAD 223
+ G E R+ L ++P R R DGWMEIE+ +
Sbjct: 214 MVGHELSESCRRYVCFHEAMEWQFLTRKNL-VNPER--------REDGWMEIEIGE 260
>sp|Q9C7K0|VBF_ARATH F-box protein VBF OS=Arabidopsis thaliana GN=VBF PE=1 SV=1
Length = 282
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 126/247 (51%), Gaps = 36/247 (14%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS 66
LP CI++I++ T+P DA + VS +F+ A DSD VWEKFLPSDYK +IS S
Sbjct: 4 LPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNI 63
Query: 67 TSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWTSL 126
+S KK++Y LC + I+N F + K +GK Y++ AR + I A++W W+++
Sbjct: 64 SS--KKEIYRCLCD-SLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNV 120
Query: 127 SKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGF----------- 175
S SRF E AEL+ E+ +I+TR+LS T Y AYL+ K K G
Sbjct: 121 SDSRFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSIKS 180
Query: 176 -GSTLLASGVYVEGI-------------NDEERQGLFL-----DPSRNTPQLFHDRRDGW 216
+ S Y+ + N EER + + D R P+ R DGW
Sbjct: 181 KNGQISKSATYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKC---RDDGW 237
Query: 217 MEIEMAD 223
MEIE+ +
Sbjct: 238 MEIELGE 244
>sp|Q9ZVR1|PP2B5_ARATH F-box protein PP2-B5 OS=Arabidopsis thaliana GN=PP2B5 PE=2 SV=1
Length = 284
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 122/222 (54%), Gaps = 18/222 (8%)
Query: 7 LPVECISHIISLT-TPRDACRLAAVSHIFKSAADSDLVWEKFLPS-DYKLIISNSVSSSS 64
LP +C++ I S T TPRDA A VS F +SD VWEKFLP DY ++ S SS
Sbjct: 37 LPDDCLAIISSFTSTPRDAFLAALVSKSFGLQFNSDSVWEKFLPPPDYVSLLPKSRVFSS 96
Query: 65 LSTSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWT 124
KK+LYF LC P +N MSF L+K +GKKC M+ A+ L I +WKW
Sbjct: 97 ------KKELYFALCD-PFPNHNGKMSFRLDKASGKKCVMLSAKKLLISRVVNPKYWKWI 149
Query: 125 SLSKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGV 184
S+ +SRF EV EL+ F++ + TRI+S T+Y+AY+V+ +GF ++ + +GV
Sbjct: 150 SIPESRFDEVPELLNIDSFDIRGVLNTRIISPGTHYSAYIVYTKTSHFNGFQTSPIQAGV 209
Query: 185 YVEGINDEERQGLFLDPSRNTPQLFHDRRDGWMEIEMADKCN 226
+R G+ R + R+DGWME ++ D N
Sbjct: 210 GF------QRHGMSKTFIRFDSK---KRQDGWMEAKIGDFYN 242
>sp|Q9C7J9|P2B13_ARATH F-box protein PP2-B13 OS=Arabidopsis thaliana GN=PP2B13 PE=2 SV=1
Length = 284
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 127/249 (51%), Gaps = 40/249 (16%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS 66
LP C+++I++ T+P DA + VS +F+ A DSD VWEKFLPS YK +IS S +
Sbjct: 4 LPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRIF 63
Query: 67 TSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWTSL 126
+S KK++Y LC + I+N F + K +GK Y++ AR + I + A++ W+++
Sbjct: 64 SS--KKEIYRCLCD-SLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNV 120
Query: 127 SKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGVYV 186
S SRF E AEL+ E+ +I+T +LS T Y AYL+ K + +G L+ + V
Sbjct: 121 SDSRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKV--TNGAYGLDLVPAETSV 178
Query: 187 EGIN-------------DEERQGLFL-------------------DPSRNTPQLFHDRRD 214
+ N DE++Q + D R P+ R D
Sbjct: 179 KSKNGQNNKNTTYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKA---RDD 235
Query: 215 GWMEIEMAD 223
GW+EIE+ +
Sbjct: 236 GWLEIELGE 244
>sp|Q570N1|PP2B3_ARATH F-box protein PP2-B3 OS=Arabidopsis thaliana GN=PP2B3 PE=2 SV=2
Length = 123
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Query: 5 NALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSS 64
+ LP CIS+IIS TTPRDAC A+VS F+SA SD VWEKFLP DY ++ S
Sbjct: 14 DGLPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPES----- 68
Query: 65 LSTSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANF 120
L KK+L F LC P+ I SF L+K +G+KC M+ +G+ I W ++ F
Sbjct: 69 -RVFLSKKELCFSLCRVPLLIEGGKKSFWLDKTSGEKCIMLSPKGMVISWVNSPQF 123
>sp|Q9LEX0|P2A13_ARATH F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1
Length = 290
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS 66
LP C++ I++ P + CRLA ++ +F+ A+ +D +WE LP++Y+ +I++ V
Sbjct: 28 LPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYR-VIAHKVFDEITL 86
Query: 67 TSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWTSL 126
T L KKDLY L P ++ T ++K TG+ C + ++ L I +W
Sbjct: 87 TKLIKKDLYAKLSQ-PNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIPT 145
Query: 127 SKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLAS 182
+SRF A + W+FEV E + S Y+ + + GK++ G + S
Sbjct: 146 DESRFQSAAYVQQIWWFEVGGEFEIQFPSG--TYSLFFRIQLGKTSKRLGRRICNS 199
>sp|Q9LF92|P2A15_ARATH F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1
Length = 300
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS 66
+P C++ + TP + C LA ++ F+ AA SD VWEK LP +Y+ ++ +
Sbjct: 24 IPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLL--DLLPPERY 81
Query: 67 TSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWTSL 126
SL KKD+ F + P+ ++ +++ TG+ C + ARG+ I +W W
Sbjct: 82 HSLSKKDI-FAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWIPT 140
Query: 127 SKSRFPEVAELVYFWFFEVNARI 149
+SRF VA L W+FEV+ +
Sbjct: 141 EESRFHVVAYLQQIWWFEVDGTV 163
>sp|Q9CAN4|P2A11_ARATH F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1
Length = 289
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS 66
LP C++ I+ P + CR + ++ F A+ +D VWE LP DYKLI+ + S
Sbjct: 29 LPESCVALILQNLDPVEICRFSKLNTAFHGASWADFVWESKLPPDYKLILEKIL--GSFP 86
Query: 67 TSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWTSL 126
+L K+D++ L F ++ ++K TG C A+GL I +W
Sbjct: 87 DNLRKRDIFTFLSRVNSFDEGNKKAW-VDKRTGGLCLCTSAKGLSITGIDDRRYWSHIPS 145
Query: 127 SKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGVYV 186
SRF VA + W+F+V+ I+ + Y+ Y + GK FG +
Sbjct: 146 DDSRFASVAYVQQIWWFQVDGEIDFPFPAG--TYSVYFRLQLGKPGKRFGWKV------- 196
Query: 187 EGINDEERQGLFLDPSR 203
++ E+ G + P R
Sbjct: 197 --VDTEQVHGWNIKPVR 211
>sp|Q9LN77|P2A12_ARATH F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1
Length = 291
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS 66
LP C++ I+ P + CR + ++ F+ A+ +D VWE LP +Y+ ++ +
Sbjct: 31 LPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILGG--FP 88
Query: 67 TSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWTSL 126
+L K+ LY L F ++ T ++K T C + A+GL I +W
Sbjct: 89 ENLQKRHLYAFLSRINSF-DDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHIPT 147
Query: 127 SKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGVYV 186
+SRF VA L W+FEV+ I+ Y+ + + G+S FG +
Sbjct: 148 DESRFSSVAYLQQIWWFEVDGEIDFPFPVG--TYSIFFRLQLGRSGKWFGRRVC------ 199
Query: 187 EGINDEERQGLFLDPSR 203
N E+ G + P R
Sbjct: 200 ---NTEQVHGWDIKPVR 213
>sp|Q9FJ80|P2A14_ARATH F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1
Length = 291
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 8/175 (4%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSL- 65
+P CI+ + P + C LA V+ F A+ SD VWE LPS+YK ++ +
Sbjct: 24 VPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQQQV 83
Query: 66 ----STSLPKKDLYFHLCHYPVFINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFW 121
KK++Y LC P + T L+K +GK + + + I +W
Sbjct: 84 GVKDKLIYRKKEIYARLCR-PNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDRRYW 142
Query: 122 KWTSLSKSRFPEVAELVYFWFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGFG 176
+ S +SRF + L W+ E +I + Y+ + GK G
Sbjct: 143 EHISSDESRFGSITYLRQIWWLEAVGKIRFEFAPGK--YSLLFKIQLGKPIRKCG 195
>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana
GN=PP2A3 PE=4 SV=1
Length = 463
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 92 FALEKETGKKCY-----MVGARGLCIEWGSTANFWKWTSL----SKSRFPEVAELVYFWF 142
+E+E K+ M+ AR L IEW + WKW +L S + F EVAEL+ ++
Sbjct: 291 LQMEEEKNKQLIAQANRMICARDLNIEWSHSEEHWKWVNLDHNISSNTFVEVAELLGVYW 350
Query: 143 FEVNARIETRILSNRTNYAAYLVFKFGKS 171
F+V+ ++T ++ T+Y V S
Sbjct: 351 FDVSGSLDTTEMAPWTHYEVLFVVNLKDS 379
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 102 CYMVGARGLCIEWGSTANFWKWTSL----SKSRFPEVAELVYFWFFEVNARIETRILSNR 157
+M+ AR L I W +N W W L S E+A L + +V + +TR L+ R
Sbjct: 258 VFMIDARDLSIAWSEDSNHWTWLPLPNQNSNESVMEIAFLKSASWLDVAGKFDTRYLTPR 317
Query: 158 TNYAAYLVFKF 168
T Y V K
Sbjct: 318 TRYEVVFVVKL 328
>sp|Q9C8U9|P2A04_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis
thaliana GN=PP2A4 PE=4 SV=1
Length = 165
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 99 GKKCYMVGARGLCIEWGSTANFWKWTSL----SKSRFPEVAELVYFWFFEVNARIETRIL 154
G+K +M+ AR L I W +W W L S + + A L + +VN + +TR L
Sbjct: 9 GQK-HMIYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTREL 67
Query: 155 SNRTNYAAYLVFKFGKSTDGF 175
+ T Y V K + G+
Sbjct: 68 TLETTYEVVYVVKLEDTASGW 88
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 84 FINNCTMSFALEKETGKKCYMVGARGLCIEWGSTANFWKWTSLSKSRFP---EVAELVYF 140
+ N ++ EKE KC+MV AR L + W W+S+ ++ EVA L
Sbjct: 158 LLANISVGVYREKEANSKCFMVPARKLQMSHSEKLINWTWSSIYETPNDAAIEVAMLNEV 217
Query: 141 WFFEVNARIETRILSNRTNYAAYLVFKFGKSTDGF 175
+ ++ TR L+ T Y + ++ G+
Sbjct: 218 HWLHMSGNFHTRNLTPGTKYEVVFLVSLDDTSSGW 252
>sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1
Length = 605
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 1 MDITNALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKF 47
+D + LPVE I+S R C+ A VS +K AD D++W +
Sbjct: 107 LDFLSLLPVEISFRILSFLDARSLCQAAQVSKHWKELADDDVIWHRM 153
>sp|Q8CHQ0|FBX4_MOUSE F-box only protein 4 OS=Mus musculus GN=Fbxo4 PE=1 SV=2
Length = 385
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKF----LPS----DYKL---- 54
LPV+ +I+S +P D C+L + H + ++W F LPS D+K
Sbjct: 60 LPVDVQLYILSFLSPHDLCQLGSTDHYWNKTIRDPILWRYFLLRDLPSWSSVDWKSLPDL 119
Query: 55 -IISNSVSSSSLSTSLPKKDLYFHLCHY 81
I+ +S + ST L ++Y C Y
Sbjct: 120 EILKKPISEVTDSTCLDYMEVYKMCCPY 147
>sp|B8M7Q5|SCONB_TALSN Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Talaromyces stipitatus (strain ATCC 10500 / CBS
375.48 / QM 6759 / NRRL 1006) GN=sconB PE=3 SV=1
Length = 667
Score = 34.3 bits (77), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 1 MDITNALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKF 47
+D ALP E I+S CR A VS +K AD D+VW +
Sbjct: 182 IDFITALPPEISFKILSYLDTASLCRAAQVSRAWKCLADDDVVWHRM 228
>sp|Q9QZM9|FBX16_MOUSE F-box only protein 16 OS=Mus musculus GN=Fbxo16 PE=2 SV=1
Length = 334
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 1 MDITNALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVW 44
+D T LP +I S PR CR A VS +KS A+ D +W
Sbjct: 86 LDFTTKLPRVLSVYIFSFLDPRSLCRCAQVSWYWKSLAELDQLW 129
>sp|D4D8P3|SCONB_TRIVH Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Trichophyton verrucosum (strain HKI 0517) GN=sconB
PE=3 SV=1
Length = 663
Score = 34.3 bits (77), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 1 MDITNALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKF 47
+D ALP E I+S C A VSH +++ AD D+VW +
Sbjct: 195 IDFVTALPPEISFKILSYLDTASLCSAAQVSHSWRALADDDVVWHRM 241
>sp|D4AM37|SCONB_ARTBC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS
112371) GN=sconB PE=3 SV=1
Length = 663
Score = 34.3 bits (77), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 1 MDITNALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKF 47
+D ALP E I+S C A VSH +++ AD D+VW +
Sbjct: 195 IDFVTALPPEISFKILSYLDTASLCSAAQVSHSWRALADDDVVWHRM 241
>sp|Q9UKT5|FBX4_HUMAN F-box only protein 4 OS=Homo sapiens GN=FBXO4 PE=1 SV=2
Length = 387
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSD 51
LP++ +I+S +P D C+L + +H + ++W FL D
Sbjct: 62 LPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 106
>sp|B6Q4Z5|SCONB_PENMQ Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59
/ QM 7333) GN=sconB PE=3 SV=1
Length = 660
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 1 MDITNALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKF 47
+D ALP E I+S CR A VS +K AD D+VW +
Sbjct: 175 IDFITALPPEISFKILSYLDTASLCRAAQVSRGWKCLADDDVVWHRM 221
>sp|Q7XR80|ARP8_ORYSJ Actin-related protein 8 OS=Oryza sativa subsp. japonica GN=ARP8
PE=2 SV=1
Length = 484
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 5 NALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFL---PSDYKLII 56
+ LP++ ++ I+ L P DA R AV ++ A + +W FL P ++L++
Sbjct: 48 DVLPIDVLAQILRLLGPADAARSTAVCRAWRLLASDNGLWAFFLRLGPDPWELVV 102
>sp|A8WAT2|ARP8_ORYSI Actin-related protein 8 OS=Oryza sativa subsp. indica GN=ARP8 PE=2
SV=1
Length = 484
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 5 NALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFL---PSDYKLII 56
+ LP++ ++ I+ L P DA R AV ++ A + +W FL P ++L++
Sbjct: 48 DVLPIDVLAQILRLLGPADAARSTAVCRAWRLLASDNGLWAFFLRLGPDPWELVV 102
>sp|O81865|P2A01_ARATH Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1
PE=2 SV=1
Length = 246
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 97 ETGKKCYMVGARGLCIEWGSTANFWKW--TSLSKSRFPEVAELVYFWFFEVNARIETRIL 154
E C+M+ A+ L I W N+W W S + E L + ++ + +TR L
Sbjct: 89 ERNSNCFMLFAKNLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNL 148
Query: 155 SNRTNYAAYLVFKFGKSTDGFG 176
+ Y +VFK +G
Sbjct: 149 TPGIVYE--VVFKVKLEDPAYG 168
>sp|Q9KRJ0|COLA_VIBCH Microbial collagenase OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=vcc PE=3 SV=1
Length = 818
Score = 32.7 bits (73), Expect = 2.4, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 144 EVNARIETRILSNRTNYAAYLVFKFGKSTDGFGSTLLASGVYVEG-INDEERQGLFL 199
+ N R+E + +N ++Y Y F FG +TD G Y+EG D+ Q F+
Sbjct: 369 DYNTRVEVVVFANNSSYVNYSSFLFGNTTDN-------GGQYLEGNPADQNNQARFV 418
>sp|Q3T0J1|FBX4_BOVIN F-box only protein 4 OS=Bos taurus GN=FBXO4 PE=2 SV=1
Length = 387
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 7 LPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSD 51
LP++ +I+S +P D C+L + S + ++W FL D
Sbjct: 62 LPIDVQLYILSFLSPHDLCQLGSTSRYWNETVRDPILWRYFLLRD 106
>sp|Q8D4Y9|COLA_VIBVU Microbial collagenase OS=Vibrio vulnificus (strain CMCP6)
GN=VV2_1146 PE=3 SV=1
Length = 807
Score = 31.6 bits (70), Expect = 4.4, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 146 NARIETRILSNRTNYAAYLVFKFGKSTDGFGSTL 179
N R+E + +N +Y Y F FG +TD G L
Sbjct: 370 NQRVEVAVFANNDSYVDYSAFLFGNTTDNGGQYL 403
>sp|Q2M2T9|CO043_BOVIN Uncharacterized protein C15orf43 homolog OS=Bos taurus PE=2 SV=1
Length = 221
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 48 LPSDYKLIISNSVSSSSLSTSLPKKDLYFHLCHYPVFINNCTMSF 92
L +D+K +S S + T + +K +YF L HYPV NN +
Sbjct: 134 LATDHKKDLSKSTEKHFIRTPVVEKQMYFPLQHYPV--NNMVTGY 176
>sp|Q9D417|FBX24_MOUSE F-box only protein 24 OS=Mus musculus GN=Fbxo24 PE=2 SV=1
Length = 589
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 8 PVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVWEKF 47
P E + HI+S +D L H F D++ VW +
Sbjct: 30 PPELVEHIVSFLPVKDLVALGQTCHYFHEVCDAEGVWRRI 69
>sp|Q8IX29|FBX16_HUMAN F-box only protein 16 OS=Homo sapiens GN=FBXO16 PE=2 SV=1
Length = 292
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 1 MDITNALPVECISHIISLTTPRDACRLAAVSHIFKSAADSDLVW 44
+D T LP +I S PR CR A V +K+ A+ D +W
Sbjct: 86 LDFTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLW 129
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,217,676
Number of Sequences: 539616
Number of extensions: 3274100
Number of successful extensions: 6436
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 6344
Number of HSP's gapped (non-prelim): 63
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)