Query 042484
Match_columns 620
No_of_seqs 315 out of 2777
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 11:17:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042484.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042484hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 1E-111 3E-116 953.8 39.0 555 49-620 1-627 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 1E-102 4E-107 882.3 38.4 540 49-620 1-604 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.7E-73 5.7E-78 669.3 35.8 490 66-620 6-587 (926)
4 3afg_A Subtilisin-like serine 100.0 8.6E-56 2.9E-60 490.6 30.7 310 5-494 60-419 (539)
5 1y9z_A Alkaline serine proteas 100.0 9.7E-56 3.3E-60 481.3 21.2 354 66-515 13-438 (441)
6 2z2z_A TK-subtilisin precursor 100.0 1.1E-53 3.7E-58 458.7 13.4 312 4-493 23-392 (395)
7 3t41_A Epidermin leader peptid 100.0 5.8E-52 2E-56 456.1 25.0 312 5-493 66-465 (471)
8 1r6v_A Subtilisin-like serine 100.0 1E-49 3.4E-54 447.4 19.6 322 5-503 53-449 (671)
9 2p4e_P Proprotein convertase s 100.0 5.9E-51 2E-55 454.5 5.8 321 5-492 109-465 (692)
10 4h6x_A Thiazoline oxidase/subt 100.0 8.3E-51 2.8E-55 430.4 5.0 281 67-492 21-337 (357)
11 1r0r_E Subtilisin carlsberg; h 100.0 7.8E-49 2.7E-53 400.4 17.4 241 66-492 13-274 (274)
12 1gci_A Subtilisin; hydrolase, 100.0 2E-48 6.9E-53 395.9 18.7 240 66-492 13-269 (269)
13 1to2_E Subtilisin BPN'; serine 100.0 2.1E-48 7.1E-53 398.6 18.1 243 66-493 13-276 (281)
14 1dbi_A AK.1 serine protease; h 100.0 5.8E-48 2E-52 395.0 18.6 243 66-492 20-279 (280)
15 2x8j_A Intracellular subtilisi 100.0 3.5E-48 1.2E-52 405.2 15.4 248 66-492 30-310 (327)
16 3zxy_A Subtilisin-like protein 100.0 2.7E-48 9.3E-53 398.5 12.1 245 74-492 4-274 (282)
17 1thm_A Thermitase; hydrolase(s 100.0 4E-47 1.4E-51 388.8 19.4 242 66-492 20-278 (279)
18 4h6w_A N-terminal cyanobactin 100.0 4.1E-48 1.4E-52 402.0 11.0 252 67-492 11-287 (306)
19 2ixt_A 36KDA protease; serine 100.0 8.1E-47 2.8E-51 392.9 18.5 263 66-488 15-310 (310)
20 2z30_A TK-subtilisin; thermoco 100.0 4.4E-47 1.5E-51 396.2 13.5 253 66-492 17-316 (320)
21 3lpc_A APRB2; protease, subtil 100.0 2.4E-46 8.1E-51 394.4 15.7 267 65-493 20-337 (340)
22 2iy9_A SUBA; toxin, shiga, pla 100.0 3.5E-46 1.2E-50 394.1 11.8 251 66-493 32-329 (347)
23 1wmd_A Protease; alpha-beta hy 100.0 3.2E-45 1.1E-49 398.0 14.6 258 67-494 11-319 (434)
24 2oxa_A Extracellular serine pr 100.0 1.4E-44 4.9E-49 407.7 18.1 306 64-495 57-427 (600)
25 1p8j_A Furin precursor; prohor 100.0 1.2E-44 4.2E-49 396.9 14.7 269 64-494 25-331 (471)
26 1sh7_A Extracellular subtilisi 100.0 1.1E-43 3.9E-48 363.6 20.1 221 66-461 18-257 (284)
27 2b6n_A Proteinase K; S binding 100.0 1.6E-43 5.6E-48 361.8 20.0 220 66-460 20-260 (278)
28 3lxu_X Tripeptidyl-peptidase 2 100.0 9.1E-44 3.1E-48 415.1 19.1 313 144-619 267-631 (1354)
29 4dzt_A Aqualysin-1, aqualysin- 100.0 3.9E-43 1.3E-47 359.0 18.2 220 66-462 20-260 (276)
30 2id4_A Kexin; KEX2, kexin, fur 100.0 2E-43 6.9E-48 389.8 15.7 266 64-494 41-343 (503)
31 2pwa_A Proteinase K; structure 100.0 3.8E-43 1.3E-47 358.8 15.3 212 69-460 24-259 (279)
32 2qtw_B Proprotein convertase s 100.0 1.2E-42 4.1E-47 378.3 17.5 261 68-492 17-313 (546)
33 3hjr_A Extracellular serine pr 100.0 7.2E-42 2.4E-46 386.8 21.1 307 64-493 57-425 (600)
34 3f7m_A Alkaline serine proteas 100.0 5E-42 1.7E-46 351.3 15.2 215 67-461 23-261 (279)
35 1t1e_A Kumamolisin; proenzyme, 99.9 1.3E-22 4.6E-27 224.4 5.0 86 174-265 273-383 (552)
36 1ga6_A Serine-carboxyl protein 99.7 1.8E-18 6E-23 182.6 10.5 89 176-266 90-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 98.5 4.2E-08 1.4E-12 107.8 4.0 87 176-265 262-374 (544)
38 3cnq_P Subtilisin BPN'; unclea 98.2 1.6E-06 5.5E-11 70.2 6.4 47 4-51 33-79 (80)
39 2w2n_P Proprotein convertase s 98.1 4.7E-06 1.6E-10 72.2 5.9 45 3-47 69-113 (114)
40 2qtw_A Proprotein convertase s 97.7 2.9E-05 1E-09 68.1 5.5 43 5-47 81-123 (124)
41 3icu_A E3 ubiquitin-protein li 97.6 5.3E-05 1.8E-09 71.5 5.7 77 308-384 103-187 (194)
42 1v5i_B POIA1, IA-1=serine prot 97.4 0.00019 6.7E-09 57.2 5.5 42 6-47 31-75 (76)
43 2z30_B TK-subtilisin; thermoco 96.3 0.0054 1.8E-07 47.1 5.3 44 3-47 21-64 (65)
44 2ys4_A Hydrocephalus-inducing 95.6 0.027 9.3E-07 48.9 7.4 51 551-606 41-92 (122)
45 2ek8_A Aminopeptidase; metallo 91.9 0.13 4.3E-06 54.7 4.9 65 306-370 111-181 (421)
46 2e6j_A Hydin protein; PAPD, st 91.9 0.2 6.8E-06 42.3 5.3 55 551-606 26-82 (112)
47 3lxu_X Tripeptidyl-peptidase 2 91.0 0.093 3.2E-06 62.6 2.9 25 73-97 32-56 (1354)
48 3qbt_B Inositol polyphosphate 90.9 0.96 3.3E-05 40.0 8.8 53 551-604 43-100 (140)
49 3iib_A Peptidase M28; YP_92679 90.8 0.26 9E-06 52.7 6.0 78 305-382 124-225 (444)
50 2r39_A FIXG-related protein; s 87.6 2.6 8.8E-05 35.9 8.9 53 552-606 32-85 (118)
51 3kas_A Transferrin receptor pr 87.6 0.35 1.2E-05 54.0 4.2 37 306-342 128-166 (640)
52 3fed_A Glutamate carboxypeptid 84.3 0.7 2.4E-05 52.1 4.5 36 305-340 150-187 (707)
53 3qis_A Inositol polyphosphate 83.0 3.5 0.00012 42.6 9.0 55 551-606 46-105 (366)
54 2qsv_A Uncharacterized protein 76.4 4 0.00014 38.8 6.4 52 551-606 19-71 (220)
55 1msp_A MSP, major sperm protei 76.4 11 0.00039 32.3 8.6 51 552-605 26-77 (126)
56 3abz_A Beta-glucosidase I; gly 75.6 9.7 0.00033 43.8 10.2 42 418-459 620-662 (845)
57 3zyz_A Beta-D-glucoside glucoh 74.6 7.9 0.00027 43.7 9.0 55 551-606 613-675 (713)
58 1wic_A Hypothetical protein ri 73.3 14 0.00046 33.0 8.6 52 551-605 35-87 (152)
59 1z9l_A Vesicle-associated memb 71.5 10 0.00035 32.6 7.2 52 551-605 27-79 (128)
60 3idu_A Uncharacterized protein 70.6 13 0.00043 32.1 7.4 51 550-604 32-84 (127)
61 1row_A SSP-19, MSP-domain prot 69.8 21 0.00072 29.8 8.5 49 554-605 18-67 (109)
62 1m1s_A WR4; structural genomic 67.4 22 0.00077 30.0 8.1 50 553-605 25-75 (116)
63 2x41_A Beta-glucosidase; hydro 66.1 11 0.00036 42.7 7.7 66 538-606 597-678 (721)
64 2cri_A Vesicle-associated memb 63.7 13 0.00045 32.8 6.3 52 551-605 31-83 (147)
65 2qsv_A Uncharacterized protein 59.2 36 0.0012 32.0 9.0 52 551-606 134-187 (220)
66 3isy_A Bsupi, intracellular pr 44.5 1.4E+02 0.0049 25.1 9.5 55 549-604 16-88 (120)
67 3d33_A Domain of unknown funct 42.0 1.2E+02 0.0041 25.1 8.3 67 543-619 39-106 (108)
68 2l0d_A Cell surface protein; s 40.6 92 0.0032 26.1 7.5 24 550-573 18-43 (114)
69 2kq1_A BH0266 protein; solutio 40.1 6.2 0.00021 33.6 0.1 52 554-605 56-110 (119)
70 1w8o_A Bacterial sialidase; 3D 39.9 47 0.0016 36.2 7.3 63 540-606 363-427 (601)
71 1wgl_A TOLL-interacting protei 36.6 16 0.00053 27.0 1.8 32 427-458 6-37 (59)
72 3e9t_A Na/Ca exchange protein; 29.7 1.4E+02 0.0048 24.7 7.0 61 540-602 8-74 (114)
73 2l04_A Major tail protein V; b 29.0 72 0.0025 25.5 4.8 26 580-606 9-34 (91)
74 3sd2_A Putative member of DUF3 28.7 2.4E+02 0.0082 23.0 8.2 64 543-619 35-99 (101)
75 1yew_A Particulate methane mon 27.0 1.6E+02 0.0053 29.9 7.7 52 550-605 263-337 (382)
76 3q48_A Chaperone CUPB2; IG fol 26.4 2.5E+02 0.0087 26.9 9.1 52 551-604 42-103 (257)
77 3hrz_B Cobra venom factor; ser 23.9 2.3E+02 0.0079 27.0 8.3 66 536-604 83-154 (252)
78 3ead_A Na/Ca exchange protein; 20.5 1.9E+02 0.0064 24.7 6.2 61 539-602 9-76 (137)
79 3ndz_E Endoglucanase D; cellot 20.4 3.6E+02 0.012 22.1 9.1 54 551-604 15-87 (107)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=1e-111 Score=953.80 Aligned_cols=555 Identities=35% Similarity=0.605 Sum_probs=500.6
Q ss_pred cCCCccccCcccCCCCCCccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCC-CCcccCc----
Q 042484 49 TTHSWEFLGLEQNGRIPPNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKD-ARFHCNR---- 123 (620)
Q Consensus 49 ~~~s~~~~g~~~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~-~~~~~n~---- 123 (620)
++++|+|+|+++. ..+|+.+.+|+||+|||||||||++||+|.+.|++|+|.+|+|.|+.+.+ +...||+
T Consensus 1 Tt~s~~flgl~~~-----~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig 75 (649)
T 3i6s_A 1 TTHTSDFLKLNPS-----SGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIG 75 (649)
T ss_dssp CCSHHHHTTCCSS-----SSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEE
T ss_pred CCCChHHcCCCCc-----hhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceee
Confidence 5789999999853 58999999999999999999999999999999999999999999999888 7788999
Q ss_pred --cccccc-cccCCCCCCCCCCCCCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHH
Q 042484 124 --YFNQDY-AVHKGPLNSSFYSARDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDC 200 (620)
Q Consensus 124 --~~~~~~-~~~~~~~~~~~~~~~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~ 200 (620)
+|.+++ .. ......+..+++|..||||||||||||+.+++.+++|++.+.+.||||+|+|++||+|+.. | |..+
T Consensus 76 ~~~f~~~~~~~-~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~-g-~~~~ 152 (649)
T 3i6s_A 76 ANYFNKGILAN-DPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE-G-TFTS 152 (649)
T ss_dssp EEECCHHHHHH-CTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETT-E-ECHH
T ss_pred eEeccCccccc-ccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCC-C-CCHH
Confidence 444444 22 1122345667899999999999999999988888889888899999999999999999987 5 9999
Q ss_pred HHHHHHHHHHhCCCcEEeecH-----------HHHHHHHHHhcCcEEEEecCCCCCCCCccCCCCCceEEecccccCCcc
Q 042484 201 DIIAAFDMAIHDGVDMLSVSL-----------VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNAAPRQIVVGASTMDRDL 269 (620)
Q Consensus 201 ~i~~ai~~a~~~gvdVIn~Sl-----------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~ap~vitVga~~~~~~~ 269 (620)
++++||++|+++|+||||||| +.+++++|+++|++||+||||+|+...++.+.+||+|+|||++.||.|
T Consensus 153 ~i~~Ai~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f 232 (649)
T 3i6s_A 153 DLIAAMDQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTF 232 (649)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEE
T ss_pred HHHHHHHHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccce
Confidence 999999999999999999999 677888999999999999999999999999999999999999999999
Q ss_pred cceEEeCCCeEEEEeeccCCCCCCCceeeEE----------EccCCCcc--cccEEEEEe--ccchhHHHHHHHcCCcEE
Q 042484 270 SNYVVLGNNKRFKLISERAKGLPSDKLFTFI----------RTLDPKKV--KGKILVCLN--VRSVDEGLQAALAGAADI 335 (620)
Q Consensus 270 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~----------~~~~~~~~--~gkivl~~~--~~~~~~~~~~~~~ga~gv 335 (620)
...+.+++++++.|.+++..... ...+|++ +.+++..+ +||||+|.| +.+.+|..+++++|+.|+
T Consensus 233 ~~~~~lgng~~~~g~sl~~~~~~-~~~~plv~~~~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~ 311 (649)
T 3i6s_A 233 AGTLTLGNGLKIRGWSLFPARAF-VRDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAI 311 (649)
T ss_dssp EEEEEETTSCEEEEECCCSSCBC-EEEEEEECCTTTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEE
T ss_pred eeEEEeCCCcEEeeeecccCccc-CcceeeEecccccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEE
Confidence 99999999999999999876643 5668887 23556666 999999999 889999999999999999
Q ss_pred EEecCCCCCCcccCCCccccEEEeecCCccee-eecccCCCcEEEEeCCceeecCCCCCceeeccCCCCC-----CCCCc
Q 042484 336 VLVNLPEFGNDHTTDRHVLPASVITFNDGYYN-LFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPI-----HITPE 409 (620)
Q Consensus 336 i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l-~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~-----~~kPd 409 (620)
|++|+. .......+.+|+++|+..+|+.| .|+++.++++++|.+..+..+..+.+.++.||||||+ ++|||
T Consensus 312 i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPD 388 (649)
T 3i6s_A 312 FISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPD 388 (649)
T ss_dssp EECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCC
T ss_pred EEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCe
Confidence 999986 35566778999999999999999 9999999999999999998888889999999999997 58999
Q ss_pred eee---------cC--------------CCcEEeccccchhhhhhhhhhhhcccCCCCCHHHHHHHHHcccccCCCCcce
Q 042484 410 ILK---------RR--------------IPFNSISGTSMSGPYISGIAGLPKILHPDWSPAAVQSAIMTTATTQDNKKQQ 466 (620)
Q Consensus 410 i~a---------~~--------------~~y~~~sGTSMAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~ 466 (620)
|+| +. ..|..|||||||||||||++|||||+||+|||++||++||+||+++++.+.|
T Consensus 389 I~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~ 468 (649)
T 3i6s_A 389 ILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKP 468 (649)
T ss_dssp EEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSB
T ss_pred EEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCc
Confidence 999 11 6899999999999999999999999999999999999999999999999999
Q ss_pred eccC-CCCCCCCceecccccCccccCCCceeeecCchhhHHhhhhcCCCcceeeeccCCcccc--CCCCCccccccCCCe
Q 042484 467 ILDA-SFTEATPFSYGAGHVQPNLAMDPGLVYYLTVNDYLNFLCALGYNKNVISLFSTNCTYT--CPKNAIILVNFNYPS 543 (620)
Q Consensus 467 ~~~~-~~~~~~~~~~GaG~vn~~~A~~~~lv~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ln~ps 543 (620)
+.+. .+.++++++||+|+|||.+|++||||||.+.+||++|||++||+..+|++|++. +.+ |++ ...+|||||
T Consensus 469 i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~-~~~~~C~~---~~~~lNyPs 544 (649)
T 3i6s_A 469 IKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARS-SASHNCSN---PSADLNYPS 544 (649)
T ss_dssp CEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTT-TSCC-CCC---CCCCCCCSS
T ss_pred ccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecC-CCcCCCCC---chhhcCCCc
Confidence 9875 567889999999999999999999999999999999999999999999999987 677 986 467999999
Q ss_pred EEeec-cCce-----EEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEccccCCCCeEEE
Q 042484 544 ITVPK-LSGS-----ITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAKNASVTKDYVFG 616 (620)
Q Consensus 544 i~~~~-~~~~-----~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~~~~~~~~~~~g 616 (620)
|++.. +... ++|+|||||||. ..+|++++++|.|++|+|+|++|+|++.+|+++|+|+|+... ...+.|+||
T Consensus 545 ~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~-~~~~~~~fg 623 (649)
T 3i6s_A 545 FIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIG-DEGQSRNVG 623 (649)
T ss_dssp EEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECC-C---CCCEE
T ss_pred EEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecc-cCCCceEEE
Confidence 99987 5665 899999999999 999999999999999999999999988999999999999875 456789999
Q ss_pred EEEC
Q 042484 617 ELIW 620 (620)
Q Consensus 617 ~~~w 620 (620)
+|+|
T Consensus 624 ~l~w 627 (649)
T 3i6s_A 624 SITW 627 (649)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9999
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.1e-102 Score=882.33 Aligned_cols=540 Identities=39% Similarity=0.696 Sum_probs=447.1
Q ss_pred cCCCccccCcccCCCCCCccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCcccc--
Q 042484 49 TTHSWEFLGLEQNGRIPPNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFN-- 126 (620)
Q Consensus 49 ~~~s~~~~g~~~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~-- 126 (620)
++++|+|+|++ ..+|.+..+|+||+|||||||||++||+|.++++++++.+|+|.|+.+.+ +.||+...
T Consensus 1 tt~s~~flGl~-------~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~--~~~n~k~ig~ 71 (621)
T 3vta_A 1 TTRSWDFLGFP-------LTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNN--FRCNRKIIGA 71 (621)
T ss_dssp CCSHHHHTTCC-------TTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSS--CCCCSSEEEE
T ss_pred CCCChhHcCCC-------ccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCC--cccCcceeee
Confidence 57999999998 46888999999999999999999999999999999999999999998775 77988222
Q ss_pred ccccccCCCCCCCCCCCCCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHH
Q 042484 127 QDYAVHKGPLNSSFYSARDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAF 206 (620)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai 206 (620)
..|.........+..+|+|++||||||||||||+.+.+.++.|++.+.++||||+|+|++||+|++. | |..+++++||
T Consensus 72 ~~~~~~~~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~-g-~~~~di~~a~ 149 (621)
T 3vta_A 72 RSYHIGRPISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWND-G-CSDTDILAAY 149 (621)
T ss_dssp EECCCSSSCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETT-E-ECHHHHHHHH
T ss_pred eecccCCccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCC-C-CCHHHHHHHH
Confidence 1221111223345677899999999999999999988888888888889999999999999999987 4 8999999999
Q ss_pred HHHHhCCCcEEeecH------------HHHHHHHHHhcCcEEEEecCCCCCCCCccCCCCCceEEecccccCCcccceEE
Q 042484 207 DMAIHDGVDMLSVSL------------VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNAAPRQIVVGASTMDRDLSNYVV 274 (620)
Q Consensus 207 ~~a~~~gvdVIn~Sl------------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~ap~vitVga~~~~~~~~~~~~ 274 (620)
++|+++|+||||||| ++++.++|+++||++|+||||+|+...++.+++||+++|++++.++.+...+.
T Consensus 150 ~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~ 229 (621)
T 3vta_A 150 DDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQ 229 (621)
T ss_dssp HHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEE
T ss_pred HHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEE
Confidence 999999999999999 67888999999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEeeccCCCCCCCceeeEE--------------------EccCCCcccccEEEEEeccchhHHHHHHHcCCcE
Q 042484 275 LGNNKRFKLISERAKGLPSDKLFTFI--------------------RTLDPKKVKGKILVCLNVRSVDEGLQAALAGAAD 334 (620)
Q Consensus 275 ~g~~~~~~g~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~g 334 (620)
++++..+.+.++.... ...++++ ..+++..++|||++|.+ .+..+.......|+.+
T Consensus 230 ~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~-~~~~~~~~~~~~Ga~g 305 (621)
T 3vta_A 230 IGNGQSFQGVSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEA-SFGPHEFFKSLDGAAG 305 (621)
T ss_dssp ETTSCEEEEBCCCCSC---CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSS-CCCHHHHHHHHTTCSE
T ss_pred eccCceeeeeecccCC---CcccccccccccccccccccccccccccccccccccceEEEEec-CCChhHHhhhhcceeE
Confidence 9999999888776433 2344444 34567789999999986 3445667788899999
Q ss_pred EEEecCCCCCCcccCCCccccEEEeecCCccee-eecccCCCcEEEEeCCceeecCCCCCceeeccCCCCC-----CCCC
Q 042484 335 IVLVNLPEFGNDHTTDRHVLPASVITFNDGYYN-LFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPI-----HITP 408 (620)
Q Consensus 335 vi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l-~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~-----~~kP 408 (620)
++++++.. ...+.+.+|...++..++..+ .|+.....+.+.+..... ......+.++.||||||+ ++||
T Consensus 306 vi~~~~~~----~~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~-~~~~~~~~va~FSSrGP~~~~~~ilKP 380 (621)
T 3vta_A 306 VLMTSNTR----DYADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTT-ILNASAPVVVSFSSRGPNRATKDVIKP 380 (621)
T ss_dssp EEEECSCC----SSCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEE-EECTTCCCBCTTSCCCSCTTCTTSCSC
T ss_pred EEEEecCC----CcccccccceEEECHHHHHHHHHHHhccCCcceEEecceE-eccCCCCceeeecCCCCCCCCCCeecc
Confidence 99998754 234567899999999999999 999988888888755443 445678999999999997 4899
Q ss_pred ceee-------------------cCCCcEEeccccchhhhhhhhhhhhcccCCCCCHHHHHHHHHcccccCCCCcceecc
Q 042484 409 EILK-------------------RRIPFNSISGTSMSGPYISGIAGLPKILHPDWSPAAVQSAIMTTATTQDNKKQQILD 469 (620)
Q Consensus 409 di~a-------------------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~ 469 (620)
||+| ....|..|||||||||||||++|||||+||+|||++||++||+||++++..+
T Consensus 381 DI~APG~~Ilsa~~~~~~~~~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~----- 455 (621)
T 3vta_A 381 DISGPGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARF----- 455 (621)
T ss_dssp CEEEECSSEEEECCSSSCBTTBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTT-----
T ss_pred ccccCCcceEeecCccccccCcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccC-----
Confidence 9999 1456999999999999999999999999999999999999999999887543
Q ss_pred CCCCCCCCceecccccCccccCCCceeeecCchhhHHhhhhcCCCcceeeeccCCccccCCCCC-ccccccCCCeEEee-
Q 042484 470 ASFTEATPFSYGAGHVQPNLAMDPGLVYYLTVNDYLNFLCALGYNKNVISLFSTNCTYTCPKNA-IILVNFNYPSITVP- 547 (620)
Q Consensus 470 ~~~~~~~~~~~GaG~vn~~~A~~~~lv~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ln~psi~~~- 547 (620)
.++.+++||+|+|||.+|++||||||++.+||+.|+|+++|+..+++++++. ...|+... ....+||||||++.
T Consensus 456 ---~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lN~pS~~v~~ 531 (621)
T 3vta_A 456 ---NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGD-YSACTSGNTGRVWDLNYPSFGLSV 531 (621)
T ss_dssp ---CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC------------------------------CGGGSCCSSEEEEC
T ss_pred ---CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeecc-ccccCCCCcCcccccccccEEEEc
Confidence 3678899999999999999999999999999999999999999999999987 77887643 35789999999985
Q ss_pred --ccCceEEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEccccCCCCeEEEEEEC
Q 042484 548 --KLSGSITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAKNASVTKDYVFGELIW 620 (620)
Q Consensus 548 --~~~~~~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~~~~~~~~~~~g~~~w 620 (620)
++..+++|+|||||+|. ..+|++++++|.|++|+|+|++|+|++.||+++|+|+|+. ...+.|+||+|+|
T Consensus 532 ~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~---~~~~~~~~g~l~w 604 (621)
T 3vta_A 532 SPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG---SIKGFVVSASLVW 604 (621)
T ss_dssp CSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEE---CCCSSEEEEEEEE
T ss_pred cCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEe---cCCCceEEEEEEE
Confidence 45578999999999999 9999999999999999999999999888999999999986 3568899999999
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.7e-73 Score=669.26 Aligned_cols=490 Identities=22% Similarity=0.259 Sum_probs=372.8
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCC-----------CCCcccCccccccc-cccC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDK-----------DARFHCNRYFNQDY-AVHK 133 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~-----------~~~~~~n~~~~~~~-~~~~ 133 (620)
+..+|+++++|+||+|||||||||++||+|.+ +..|++.|.... .....||+-...++ ..
T Consensus 6 ~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~-- 77 (926)
T 1xf1_A 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYS-- 77 (926)
T ss_dssp CHHHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESC--
T ss_pred cHHHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeeccc--
Confidence 45899999999999999999999999999984 245666664221 12346776222222 11
Q ss_pred CCCCCCCCCCCCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCC-CCHHHHHHHHHHHHhC
Q 042484 134 GPLNSSFYSARDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGG-CYDCDIIAAFDMAIHD 212 (620)
Q Consensus 134 ~~~~~~~~~~~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~-~~~~~i~~ai~~a~~~ 212 (620)
....+ .|+.||||||||||||+...+.+ ..+.+.||||+|+|++||+|++. |. +..+++++||++|+++
T Consensus 78 ----~~~~~-~D~~gHGThVAgiiAg~~~~~~~----~~~~~~GvAP~A~l~~~kv~~~~-g~~~~~~~i~~Ai~~Ai~~ 147 (926)
T 1xf1_A 78 ----KDGKT-AVDQEHGTHVSGILSGNAPSETK----EPYRLEGAMPEAQLLLMRVEIVN-GLADYARNYAQAIRDAINL 147 (926)
T ss_dssp ----CCSCC-CCSSTTTTHHHHSSCCCCCCCCS----CSCCTTTTCTTSEEEEEECCCCS-CHHHHHHHHHHHHHHHHHT
T ss_pred ----cCCCC-CCCCCcHHHHHHHHhCCCccCcc----cCCceEEECCCCEEEEEEeecCC-CCCCcHHHHHHHHHHHHHh
Confidence 01122 28899999999999998755432 13568999999999999999876 42 5668999999999999
Q ss_pred CCcEEeecH-------------HHHHHHHHHhcCcEEEEecCCCCC-------------CCCccCCC--CCceEEecccc
Q 042484 213 GVDMLSVSL-------------VAIGSFHAVQHGIVVVCSDGNEGL-------------VDVTLQNA--APRQIVVGAST 264 (620)
Q Consensus 213 gvdVIn~Sl-------------~~~~~~~a~~~Gv~vV~AAGN~G~-------------~~~t~~~~--ap~vitVga~~ 264 (620)
|+||||||| +..++.+|+++|++||+||||+|+ ...++.+| +||+|+|||++
T Consensus 148 gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~ 227 (926)
T 1xf1_A 148 GAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYS 227 (926)
T ss_dssp TCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEB
T ss_pred CCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEeccc
Confidence 999999999 466778899999999999999995 33456666 79999999999
Q ss_pred cCCcccceEEe-CCCeEEEEeeccC-CCCCCCceeeEE----Ecc--CCCcccccEEEEEe--ccchhHHHHHHHcCCcE
Q 042484 265 MDRDLSNYVVL-GNNKRFKLISERA-KGLPSDKLFTFI----RTL--DPKKVKGKILVCLN--VRSVDEGLQAALAGAAD 334 (620)
Q Consensus 265 ~~~~~~~~~~~-g~~~~~~g~~~~~-~~~~~~~~~~~~----~~~--~~~~~~gkivl~~~--~~~~~~~~~~~~~ga~g 334 (620)
.++.+...+.+ +++....+.++.. ..+.....++++ +|. +..+++||||+|.| |.+..|..+++++|+.|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~g~~~~~~~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~g 307 (926)
T 1xf1_A 228 PDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANRGTKEDDFKDVKGKIALIERGDIDFKDKIAKAKKAGAVG 307 (926)
T ss_dssp CSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTTSCSTTTTTTCTTSEEEEECCSSCHHHHHHHHHHTTCSE
T ss_pred cccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCCCCCccchhhcCCeEEEEECCCCCHHHHHHHHHhCCCcE
Confidence 99988888887 5554444444332 222235668887 211 11579999999999 89999999999999999
Q ss_pred EEEecCCCCCCcc-cCCCccccEEEeecCCccee-eecccCCCcEEEEeCCceeecCCCCCceeeccCCCCC---CCCCc
Q 042484 335 IVLVNLPEFGNDH-TTDRHVLPASVITFNDGYYN-LFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPI---HITPE 409 (620)
Q Consensus 335 vi~~~~~~~~~~~-~~~~~~~p~~~i~~~~g~~l-~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~---~~kPd 409 (620)
+|++++......+ ......+|...|+..++..| . ....++++......+.....+.++.||||||+ ++|||
T Consensus 308 vi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~~~~lKPD 383 (926)
T 1xf1_A 308 VLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPTASGTKLSRFSSWGLTADGNIKPD 383 (926)
T ss_dssp EEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEECSSCSBCCTTSCCCBCTTSCBSCC
T ss_pred EEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceecccCCcceeccccCCCCCCCCccCce
Confidence 9999987533222 23457899999999988877 4 33344555444434555668899999999997 68999
Q ss_pred eee---------cCCCcEEeccccchhhhhhhhhhhhc----ccCCCCCHHH----HHHHHHcccccCCCCcceeccCCC
Q 042484 410 ILK---------RRIPFNSISGTSMSGPYISGIAGLPK----ILHPDWSPAA----VQSAIMTTATTQDNKKQQILDASF 472 (620)
Q Consensus 410 i~a---------~~~~y~~~sGTSMAaP~VAG~aALl~----~~~P~~sp~~----ik~~L~~TA~~~~~~~~~~~~~~~ 472 (620)
|+| +++.|..|||||||||||||++|||+ +.||+|+|+| ||++||+||++++..+. .
T Consensus 384 I~APG~~I~sa~~~~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~~------~ 457 (926)
T 1xf1_A 384 IAAPGQDILSSVANNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDEDE------K 457 (926)
T ss_dssp EEEECCCEEESSSCSSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGGG------T
T ss_pred EECCCCCEEeeccCCcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcCCCcccCCC------C
Confidence 999 56789999999999999999999995 5699999997 99999999998754321 2
Q ss_pred CCCCCceecccccCccccCCCceeeecCchhhHHhhhhcCCCcceeeeccCCccccCCCCCccccccCCCeEEeeccCce
Q 042484 473 TEATPFSYGAGHVQPNLAMDPGLVYYLTVNDYLNFLCALGYNKNVISLFSTNCTYTCPKNAIILVNFNYPSITVPKLSGS 552 (620)
Q Consensus 473 ~~~~~~~~GaG~vn~~~A~~~~lv~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~psi~~~~~~~~ 552 (620)
..+++++||+|+||+.+|++|.+ |+|..+|+.. +|.+.++...
T Consensus 458 ~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~--------------------------~i~l~~~~~~ 500 (926)
T 1xf1_A 458 AYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS--------------------------KVHLNNVSDK 500 (926)
T ss_dssp EECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS--------------------------CEEEEEECSE
T ss_pred ccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc--------------------------eeeccccCcc
Confidence 35678999999999999999854 4676554332 3344444567
Q ss_pred EEEEEEEEEcCC-C--ceEEEEEeC--CCCeEEEEecceEEEe-------eCCeEEEEEEEEEEccc-------cCCCCe
Q 042484 553 ITVTRRVKNVGS-P--GTYQARVKT--PQGVSVTMAPKSLKFI-------NVGEEKSFKVNIKAKNA-------SVTKDY 613 (620)
Q Consensus 553 ~~~~rtv~n~~~-~--~ty~~~~~~--~~g~~v~v~p~~l~~~-------~~g~~~~~~v~~~~~~~-------~~~~~~ 613 (620)
.+++|||||+|+ + .+|++.+.. |.++.++|+|..|.+. ++||+++|+|+|+.... ...+.|
T Consensus 501 ~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~ 580 (926)
T 1xf1_A 501 FEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYF 580 (926)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEE
T ss_pred EEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcE
Confidence 889999999997 4 567777765 6688888888765443 55999999999998520 134568
Q ss_pred EEEEEEC
Q 042484 614 VFGELIW 620 (620)
Q Consensus 614 ~~g~~~w 620 (620)
.||.|+|
T Consensus 581 ~~G~i~~ 587 (926)
T 1xf1_A 581 LEGFVRF 587 (926)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999998
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=8.6e-56 Score=490.61 Aligned_cols=310 Identities=29% Similarity=0.433 Sum_probs=248.3
Q ss_pred cceeEEecceeeeEEEEcCHHHHHHH-----------hcCCCeEEEEeceeeeeccCCCccccCccc-CCCCCCcccccc
Q 042484 5 HAIFYSYTRHINGFAAKLADAVAAEM-----------AKHPKVVSVFLSKEKKLHTTHSWEFLGLEQ-NGRIPPNSIWEK 72 (620)
Q Consensus 5 ~~~~~~y~~~~~G~s~~~~~~~~~~L-----------~~~~~V~~v~~~~~~~~~~~~s~~~~g~~~-~~~~~~~~~~~~ 72 (620)
.++++.|+ .|+||+++++.+++++| +++|+|++|++++.+++.... .+++. ..++.+..+|+.
T Consensus 60 ~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 134 (539)
T 3afg_A 60 AKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVET----EGLDESAAQVMATNMWNL 134 (539)
T ss_dssp CEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC---------------CCBCSCCBCC
T ss_pred CeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCcc----ccCCccccccCcHhHHhc
Confidence 47889996 69999999999999999 889999999999998775421 11111 112234689999
Q ss_pred CCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCCCCCChhh
Q 042484 73 ARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARDKNGHGSH 152 (620)
Q Consensus 73 ~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D~~gHGTH 152 (620)
+++|+||+|||||||||++||+|.+. .... .++ . .....+.|+.|||||
T Consensus 135 g~~G~gv~VaViDtGid~~Hpdl~~~------------i~~~------------~d~-~------~~~~~~~D~~gHGTh 183 (539)
T 3afg_A 135 GYDGSGITIGIIDTGIDASHPDLQGK------------VIGW------------VDF-V------NGKTTPYDDNGHGTH 183 (539)
T ss_dssp SCCCTTCEEEEEESBCCTTSGGGTTT------------EEEE------------EET-T------TCCSSCCBSSSHHHH
T ss_pred CCCCCCcEEEEEecCCCCCChHHhCC------------Eeee------------EEC-C------CCCCCCCCCCCCHHH
Confidence 99999999999999999999999753 0000 011 0 012346789999999
Q ss_pred hhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhC----CCcEEeecH-------
Q 042484 153 TLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHD----GVDMLSVSL------- 221 (620)
Q Consensus 153 VAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~----gvdVIn~Sl------- 221 (620)
|||||||+... ..+.+.||||+|+|+++|++++. |.+..+++++||+||+++ |++||||||
T Consensus 184 VAgiiag~~~~-------~~g~~~GvAp~A~l~~~kv~~~~-g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~ 255 (539)
T 3afg_A 184 VASIAAGTGAA-------SNGKYKGMAPGAKLVGIKVLNGQ-GSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSD 255 (539)
T ss_dssp HHHHHHCCCGG-------GTTTTCCSCTTCEEEEEECSCTT-SEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCC
T ss_pred HHHHHhCcCcc-------CCCCEEEECCCCEEEEEEeecCC-CCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCc
Confidence 99999988532 13457899999999999999987 678899999999999986 999999999
Q ss_pred ----HHHHHHHHHhcCcEEEEecCCCCCCCCccCCC--CCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCCCc
Q 042484 222 ----VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNA--APRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPSDK 295 (620)
Q Consensus 222 ----~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~--ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 295 (620)
+..++.++.++|+++|+||||+|+...++..| .+++|+|||++.+
T Consensus 256 ~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~----------------------------- 306 (539)
T 3afg_A 256 GTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDKY----------------------------- 306 (539)
T ss_dssp SCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECTT-----------------------------
T ss_pred cchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecCC-----------------------------
Confidence 57778888999999999999999866655544 5899999984311
Q ss_pred eeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccCCC
Q 042484 296 LFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFTRH 375 (620)
Q Consensus 296 ~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~ 375 (620)
T Consensus 307 -------------------------------------------------------------------------------- 306 (539)
T 3afg_A 307 -------------------------------------------------------------------------------- 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEeCCceeecCCCCCceeeccCCCCC---CCCCceeec--------------CC----CcEEeccccchhhhhhhhh
Q 042484 376 PVGYIKRPTTEFGAKPAPYMAALSSKGPI---HITPEILKR--------------RI----PFNSISGTSMSGPYISGIA 434 (620)
Q Consensus 376 ~~~~i~~~~~~~~~~~~~~~a~FSS~GP~---~~kPdi~a~--------------~~----~y~~~sGTSMAaP~VAG~a 434 (620)
+.++.||+|||+ ++||||+|+ .. .|..++|||||||||||++
T Consensus 307 -----------------~~~a~fSs~Gp~~~~~~kpdi~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~a 369 (539)
T 3afg_A 307 -----------------DVITDFSSRGPTADNRLKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIA 369 (539)
T ss_dssp -----------------SCBCSSSCCCCCTTCBCCCSEEEECSSEEEECCTTCCCSEECSSSEEEECSHHHHHHHHHHHH
T ss_pred -----------------cccccccCCCCCCCCCCcccEecCcCCEEeeccCCCCCCCCCcccccccCchHHHHHHHHHHH
Confidence 235789999997 589999991 11 4999999999999999999
Q ss_pred hhhcccCCCCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCCCc
Q 042484 435 GLPKILHPDWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMDPG 494 (620)
Q Consensus 435 ALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~~~ 494 (620)
|||+|+||+|+|++||++|++||+++...+ .+++.||+|+||+.+|++..
T Consensus 370 ALl~~~~p~~s~~~vk~~L~~tA~~~~~~~----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 370 ALLLQAHPSWTPDKVKTALIETADIVKPDE----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHCTTCCHHHHHHHHHHHSBCSSGGG----------CSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHHHCCCCCHHHHHHHHHhhCccCCCCC----------CCccCccCCccCHHHHhhhc
Confidence 999999999999999999999999875321 24678999999999999843
No 5
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=9.7e-56 Score=481.29 Aligned_cols=354 Identities=18% Similarity=0.253 Sum_probs=263.2
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARD 145 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D 145 (620)
+..+|+.+ |+||+|||||||||++||+|.+. .+.+.... ...+...+.|
T Consensus 13 ~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~-------~~~~~~~~----------------------~~~~~~~~~d 61 (441)
T 1y9z_A 13 ATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN-------NVTGTNNS----------------------GTGNWYQPGN 61 (441)
T ss_dssp CSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS-------EEEECCCT----------------------TSCCTTCCCS
T ss_pred hhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC-------cccCcccC----------------------CCCCCCCCCC
Confidence 35789865 77999999999999999999753 12221100 0012335678
Q ss_pred CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCC--eEEEEEeeeCCCCCCCHHHHHHHHHHHHhC-CCcEEeecH-
Q 042484 146 KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKA--RVAGYKACWDGMGGCYDCDIIAAFDMAIHD-GVDMLSVSL- 221 (620)
Q Consensus 146 ~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~-gvdVIn~Sl- 221 (620)
+.||||||||||+|... +..+.||||+| +|+.+|++++. |.++.+++++||+||+++ |+|||||||
T Consensus 62 ~~gHGT~vAgiia~~~~---------~~g~~GvAP~a~~~l~~~kv~~~~-g~~~~~~~~~ai~~a~~~~g~~Vin~S~G 131 (441)
T 1y9z_A 62 NNAHGTHVAGTIAAIAN---------NEGVVGVMPNQNANIHIVKVFNEA-GWGYSSSLVAAIDTCVNSGGANVVTMSLG 131 (441)
T ss_dssp SCCHHHHHHHHHHCCCS---------SSBCCCSSCSSCSEEEEEECEETT-EECCSSCHHHHHHHHHHTTCCSEEEECCC
T ss_pred CCCcHHHHHHHHhcccC---------CCCceEecCCCCCEEEEEEEeCCC-CCcCHHHHHHHHHHHHHhcCCcEEEeCCC
Confidence 89999999999999752 23478999995 99999999987 668888999999999999 999999999
Q ss_pred -------HHHHHHHHHhcCcEEEEecCCCCCCCCccCCCCCceEEecccccCCcccceEEeCCCeE--------------
Q 042484 222 -------VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNAAPRQIVVGASTMDRDLSNYVVLGNNKR-------------- 280 (620)
Q Consensus 222 -------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~-------------- 280 (620)
+..++.++.++|++||+||||+|+.....+...+++|+|||++.+.....+...+....
T Consensus 132 ~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 132 GSGSTTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAILSTVTV 211 (441)
T ss_dssp BSCCBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEECSSEEEECST
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEeccCCeeccccC
Confidence 56677788899999999999999876666666799999999987754333222222111
Q ss_pred ---------EEEeeccCCCC-CCCce------e-----------eEE------EccCCCcccccEEEEEe--c-----cc
Q 042484 281 ---------FKLISERAKGL-PSDKL------F-----------TFI------RTLDPKKVKGKILVCLN--V-----RS 320 (620)
Q Consensus 281 ---------~~g~~~~~~~~-~~~~~------~-----------~~~------~~~~~~~~~gkivl~~~--~-----~~ 320 (620)
+.|.+++.... +.... | .+. ..++..+++|||++|+| + ++
T Consensus 212 g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~rg~~~~~~~~~ 291 (441)
T 1y9z_A 212 GEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERVGNQGSSYPE 291 (441)
T ss_dssp TCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEECCSCSSSSCTH
T ss_pred CCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCccccEEEEeccccCcccccH
Confidence 11122111000 00000 0 000 14567899999999999 3 56
Q ss_pred hhHHHHHHHcCCcEEEEecCCCCCCc------ccCCCccccEEEeecCCccee-eecccCCCcEEEEeCCceeecCCCCC
Q 042484 321 VDEGLQAALAGAADIVLVNLPEFGND------HTTDRHVLPASVITFNDGYYN-LFFTFTRHPVGYIKRPTTEFGAKPAP 393 (620)
Q Consensus 321 ~~~~~~~~~~ga~gvi~~~~~~~~~~------~~~~~~~~p~~~i~~~~g~~l-~~~~~~~~~~~~i~~~~~~~~~~~~~ 393 (620)
..|..+++++|+.|+|++++...... .......+|.+.|+..+|+.| .++... +++...
T Consensus 292 ~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~t~~~~---------- 357 (441)
T 1y9z_A 292 INSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----TTVSNQ---------- 357 (441)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----EEEEEE----------
T ss_pred HHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----cccccc----------
Confidence 78999999999999999988642111 112346789999999999999 877542 222110
Q ss_pred ceeeccCCCCCCCCCceeecCCCcEEeccccchhhhhhhhhhhhcccCCCCCHHHHHHHHHcccccCCCCcceeccCCCC
Q 042484 394 YMAALSSKGPIHITPEILKRRIPFNSISGTSMSGPYISGIAGLPKILHPDWSPAAVQSAIMTTATTQDNKKQQILDASFT 473 (620)
Q Consensus 394 ~~a~FSS~GP~~~kPdi~a~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~ 473 (620)
..+.|..+||||||||||||++|||+|+||+|||++||++||+||++++..+
T Consensus 358 -------------------~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g--------- 409 (441)
T 1y9z_A 358 -------------------GNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG--------- 409 (441)
T ss_dssp -------------------EEESEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS---------
T ss_pred -------------------cCCCceeecccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC---------
Confidence 2467999999999999999999999999999999999999999999876432
Q ss_pred CCCCceecccccCccccCCCceeeecCchhhHHhhhhcCCCc
Q 042484 474 EATPFSYGAGHVQPNLAMDPGLVYYLTVNDYLNFLCALGYNK 515 (620)
Q Consensus 474 ~~~~~~~GaG~vn~~~A~~~~lv~~~~~~d~~~~~~~~~~~~ 515 (620)
.+.+||+|+||+.+|+ ||+.|+|+.++++
T Consensus 410 --~~~~~G~G~vn~~~A~-----------~~~~~lc~~~~~~ 438 (441)
T 1y9z_A 410 --RDNQTGYGMINAVAAK-----------AYLDESCTGPTDP 438 (441)
T ss_dssp --CBTTTBTCBCCHHHHH-----------HHHHHCTTCC---
T ss_pred --CcccccccccCHHHHH-----------HHHHhhhcCCCCC
Confidence 3567999999999996 4999999988643
No 6
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.1e-53 Score=458.70 Aligned_cols=312 Identities=25% Similarity=0.358 Sum_probs=244.2
Q ss_pred ccceeEEecceeeeEEEEcCHHHHHHHhcCCCeEEEEeceeeeeccCCCcc-----------ccCcccCCCCCCcccccc
Q 042484 4 AHAIFYSYTRHINGFAAKLADAVAAEMAKHPKVVSVFLSKEKKLHTTHSWE-----------FLGLEQNGRIPPNSIWEK 72 (620)
Q Consensus 4 ~~~~~~~y~~~~~G~s~~~~~~~~~~L~~~~~V~~v~~~~~~~~~~~~s~~-----------~~g~~~~~~~~~~~~~~~ 72 (620)
..+++++|.. |++|+++++++++++|+++|+|++|+|++.++++....+. .+++. .+....+|+.
T Consensus 23 g~~v~~~~~~-~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~---~i~~~~~w~~ 98 (395)
T 2z2z_A 23 GGHIVYQFKL-IPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIE---RVKAPSVWSI 98 (395)
T ss_dssp TCEEEEECSS-SSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHH---HTTCGGGGGT
T ss_pred CCEEEEEecc-CCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchh---hcCHHHHHhh
Confidence 3578889975 8999999999999999999999999999998775432211 11111 1235689999
Q ss_pred CCCCCC--cEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCCCCCCh
Q 042484 73 ARYGED--IIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARDKNGHG 150 (620)
Q Consensus 73 ~~~G~G--V~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D~~gHG 150 (620)
+ +|+| |+|||||||||++||+|.+. .+.+.. ++ .+ ....+..++.|+.|||
T Consensus 99 ~-~G~g~~v~VaViDtGid~~Hp~l~~~-------~~~~~~------------~~-~~------~~~~~~~~~~d~~gHG 151 (395)
T 2z2z_A 99 T-DGSVSVIQVAVLDTGVDYDHPDLAAN-------IAWCVS------------TL-RG------KVSTKLRDCADQNGHG 151 (395)
T ss_dssp C-SSCCTTCEEEEEESCBCTTCTTTGGG-------EEEEEE------------CG-GG------CCBCCHHHHBCSSSHH
T ss_pred c-CCCCCcEEEEEEcCCCCCCChhHhhc-------cccCcc------------cc-CC------cccCCCCCCCCCCCCH
Confidence 8 9999 99999999999999999752 111100 00 00 0000111246889999
Q ss_pred hhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhC------------------
Q 042484 151 SHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHD------------------ 212 (620)
Q Consensus 151 THVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~------------------ 212 (620)
|||||||+|.. +...+.||||+|+|+.+|++++. |.+..+++++||+||+++
T Consensus 152 T~vAgiia~~~---------n~~g~~GvAp~a~l~~~kv~~~~-g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~ 221 (395)
T 2z2z_A 152 THVIGTIAALN---------NDIGVVGVAPGVQIYSVRVLDAR-GSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPD 221 (395)
T ss_dssp HHHHHHHHCCC---------SSSSCCCSSTTCEEEEEECSCTT-SEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTT
T ss_pred HHHHHHHHeec---------CCCceEEECCCCEEEEEEEecCC-CCccHHHHHHHHHHHHhCcccccccccccccccccc
Confidence 99999999874 12447899999999999999887 678889999999999998
Q ss_pred --CCcEEeecH--------HHHHHHHHHhcCcEEEEecCCCCCCCCccCCCCCceEEecccccCCcccceEEeCCCeEEE
Q 042484 213 --GVDMLSVSL--------VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFK 282 (620)
Q Consensus 213 --gvdVIn~Sl--------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~ 282 (620)
+++|||||| +..++.++.++|+++|+||||+|......+...+++|+|||++.+
T Consensus 222 ~~~~~Vin~S~G~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------- 285 (395)
T 2z2z_A 222 DDAAEVISMSLGGPADDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN---------------- 285 (395)
T ss_dssp SCCCSEEEECEEBSCCCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT----------------
T ss_pred CCCCeEEEecCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecCC----------------
Confidence 999999999 666777888999999999999997666666667999999995422
Q ss_pred EeeccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecC
Q 042484 283 LISERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFN 362 (620)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~ 362 (620)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCCCCC--ceee--cCCCcEEeccccchhhhhhhhhhhhc
Q 042484 363 DGYYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITP--EILK--RRIPFNSISGTSMSGPYISGIAGLPK 438 (620)
Q Consensus 363 ~g~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kP--di~a--~~~~y~~~sGTSMAaP~VAG~aALl~ 438 (620)
+.++.||++||....| +|+. +++.|..++|||||||||||++|||+
T Consensus 286 ------------------------------~~~a~fS~~G~~v~APG~~i~s~~~~~~y~~~sGTS~AaP~VaG~aAll~ 335 (395)
T 2z2z_A 286 ------------------------------DNIASFSNRQPEVSAPGVDILSTYPDDSYETLMGTAMATPHVSGVVALIQ 335 (395)
T ss_dssp ------------------------------SCBCTTSCSSCSEEEECSSEEEEETTTEEEEEESHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCCcccCCCCCEEeCCCCeeeecCCCceEecCCHHHHHHHHHHHHHHHH
Confidence 2345678888754333 2322 56789999999999999999999999
Q ss_pred ccCC-------------CCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCCC
Q 042484 439 ILHP-------------DWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMDP 493 (620)
Q Consensus 439 ~~~P-------------~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~~ 493 (620)
|++| +|++.+||++|++||+++... ..+..||+|+||+.+|++.
T Consensus 336 ~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~-----------g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 336 AAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT-----------GWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCCHHHHHHH
T ss_pred HhCccccccccccccccCCCHHHHHHHHHhhccccCCC-----------CCCCCccCceeCHHHHHHH
Confidence 9999 999999999999999987432 2357899999999999873
No 7
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=5.8e-52 Score=456.07 Aligned_cols=312 Identities=15% Similarity=0.202 Sum_probs=240.3
Q ss_pred cceeEEecceeeeEEEEcCHHHHHHHhc-CCCeEEEEeceeeeeccCCC-------------ccccCcccCCCCCCcccc
Q 042484 5 HAIFYSYTRHINGFAAKLADAVAAEMAK-HPKVVSVFLSKEKKLHTTHS-------------WEFLGLEQNGRIPPNSIW 70 (620)
Q Consensus 5 ~~~~~~y~~~~~G~s~~~~~~~~~~L~~-~~~V~~v~~~~~~~~~~~~s-------------~~~~g~~~~~~~~~~~~~ 70 (620)
.++++.|.. |++|+++++++++++|++ +|+|++|++++.+++..... |.+..+.. ...+|
T Consensus 66 ~~v~~~~~~-~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~-----~~~~~ 139 (471)
T 3t41_A 66 LNVVYNIPE-LHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITN-----NGASY 139 (471)
T ss_dssp CEEEEEEGG-GTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTT-----TTGGG
T ss_pred CEEEEecCC-ccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccC-----cHHHH
Confidence 466778855 999999999999999999 99999999998887754432 22222211 13799
Q ss_pred ccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCCCCCCh
Q 042484 71 EKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARDKNGHG 150 (620)
Q Consensus 71 ~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D~~gHG 150 (620)
+.+.+|+||+|||||||||++||+|.+. .+.+....-. ..+|.........+...+.|+.|||
T Consensus 140 ~~~~~G~gv~VaViDtGid~~Hp~~~~~-------~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~d~~gHG 202 (471)
T 3t41_A 140 DDLPKHANTKIAIIDTGVMKNHDDLKNN-------FSTDSKNLVP----------LNGFRGTEPEETGDVHDVNDRKGHG 202 (471)
T ss_dssp GGCCSSCCCCEEEEESCCCTTCTTTTTT-------BCTTCEECCC----------TTCGGGCCTTCCCCTTCCCCSSSHH
T ss_pred hccCCCCCcEEEEEeCCCCCCChhHhcC-------cccCCccccc----------CCCccCCCcccCCCCCCCcCCCCcc
Confidence 9999999999999999999999999863 1111100000 0011000011112334578899999
Q ss_pred hhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcEEeecH---------
Q 042484 151 SHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDGVDMLSVSL--------- 221 (620)
Q Consensus 151 THVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~gvdVIn~Sl--------- 221 (620)
|||||||+|+. .+.||||+|+|+++|++++. .+..+++++||++|+++|++||||||
T Consensus 203 T~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~~--~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~ 268 (471)
T 3t41_A 203 TMVSGQTSANG------------KLIGVAPNNKFTMYRVFGSK--KTELLWVSKAIVQAANDGNQVINISVGSYIILDKN 268 (471)
T ss_dssp HHHHHHHHCBS------------SSBCSSTTSCEEEEECCSSS--CCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTT
T ss_pred chhhheeecCC------------ceeEECCCCeEEEEEeccCC--CCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccc
Confidence 99999999763 37899999999999999875 58899999999999999999999998
Q ss_pred ---------------HHHHHHHHHhcCcEEEEecCCCCCCCCc------------------cCCCCCceEEecccccCCc
Q 042484 222 ---------------VAIGSFHAVQHGIVVVCSDGNEGLVDVT------------------LQNAAPRQIVVGASTMDRD 268 (620)
Q Consensus 222 ---------------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t------------------~~~~ap~vitVga~~~~~~ 268 (620)
+..++..+.++|++||+||||+|..... .+..++++|+|||++.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~~-- 346 (471)
T 3t41_A 269 DHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQK-- 346 (471)
T ss_dssp CCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECTT--
T ss_pred cccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCCC--
Confidence 2345567778999999999999975432 33456889999885422
Q ss_pred ccceEEeCCCeEEEEeeccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCccc
Q 042484 269 LSNYVVLGNNKRFKLISERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHT 348 (620)
Q Consensus 269 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~ 348 (620)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccEEEeecCCcceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceeec---------------
Q 042484 349 TDRHVLPASVITFNDGYYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILKR--------------- 413 (620)
Q Consensus 349 ~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a~--------------- 413 (620)
+.++.||++||+. |||+|+
T Consensus 347 --------------------------------------------~~~a~fS~~G~~~--~di~APG~~i~~~~~~g~~~~ 380 (471)
T 3t41_A 347 --------------------------------------------SNLSEFSNFGMNY--TDIAAPGGSFAYLNQFGVDKW 380 (471)
T ss_dssp --------------------------------------------SSBCTTCCBCTTT--CCEEEECCCCHHHHHHHHHHH
T ss_pred --------------------------------------------CCCCCccCCCCCC--CeEEecCCCcccccccccccc
Confidence 2356788888864 666663
Q ss_pred ----------------CCCcEEeccccchhhhhhhhhhhhcccCC-CCCHHHHHHHHHcccccCCCCcceeccCCCCCCC
Q 042484 414 ----------------RIPFNSISGTSMSGPYISGIAGLPKILHP-DWSPAAVQSAIMTTATTQDNKKQQILDASFTEAT 476 (620)
Q Consensus 414 ----------------~~~y~~~sGTSMAaP~VAG~aALl~~~~P-~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~ 476 (620)
++.|..++|||||||||||++|||+|++| +++|++||++|++||++... .+
T Consensus 381 ~~~~~~~~~~i~s~~~~~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~------------~~ 448 (471)
T 3t41_A 381 MNEGYMHKENILTTANNGRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN------------KP 448 (471)
T ss_dssp HHTTTHHHHSEEEECTTSSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC------------CC
T ss_pred cccccccCceeEecCCCCCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC------------CC
Confidence 35789999999999999999999999999 89999999999999987532 34
Q ss_pred CceecccccCccccCCC
Q 042484 477 PFSYGAGHVQPNLAMDP 493 (620)
Q Consensus 477 ~~~~GaG~vn~~~A~~~ 493 (620)
...||+|+||+.+|++.
T Consensus 449 ~~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 449 FSRYGHGELDVYKALNV 465 (471)
T ss_dssp HHHHTTCBBCHHHHTTT
T ss_pred cCccccChhCHHHHHHH
Confidence 67899999999999984
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=1e-49 Score=447.39 Aligned_cols=322 Identities=20% Similarity=0.188 Sum_probs=229.5
Q ss_pred cceeEEecceeeeEEEEcCH---HH-HHHHhc--CCCeEEEEeceeeeeccC----CCcc--------------------
Q 042484 5 HAIFYSYTRHINGFAAKLAD---AV-AAEMAK--HPKVVSVFLSKEKKLHTT----HSWE-------------------- 54 (620)
Q Consensus 5 ~~~~~~y~~~~~G~s~~~~~---~~-~~~L~~--~~~V~~v~~~~~~~~~~~----~s~~-------------------- 54 (620)
.++.+.+. .+++++++++. ++ +++|++ +|+|++|+|++.+++... ....
T Consensus 53 ~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (671)
T 1r6v_A 53 GKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEEL 131 (671)
T ss_dssp CEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTT
T ss_pred CeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCcccccccccccccccccccccccc
Confidence 35666664 47899999864 33 466764 899999999987655310 0000
Q ss_pred ---ccCcccCCCCCCccc-cccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCcccccccc
Q 042484 55 ---FLGLEQNGRIPPNSI-WEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYA 130 (620)
Q Consensus 55 ---~~g~~~~~~~~~~~~-~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~ 130 (620)
.+++. .+.+..+ |+. .+|+||+|||||||||++||+|.+. .+.+... +.+..
T Consensus 132 ~~~~W~l~---~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~-------~~~g~~~------------~~~~~- 187 (671)
T 1r6v_A 132 SNELWGLE---AIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQ-------VIAGYRP------------AFDEE- 187 (671)
T ss_dssp GGGCHHHH---HTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTT-------BCCEEEG------------GGTEE-
T ss_pred cccCCchh---ccCCchhhhhc-cCCCCCEEEEEeCCCCCCCcccccc-------EEecccc------------cCCCc-
Confidence 01111 1234566 888 8999999999999999999999863 1111110 00000
Q ss_pred ccCCCCCCCCCCCCCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeC-----CCCCCCHHHHHHH
Q 042484 131 VHKGPLNSSFYSARDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWD-----GMGGCYDCDIIAA 205 (620)
Q Consensus 131 ~~~~~~~~~~~~~~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~-----~~g~~~~~~i~~a 205 (620)
.....+..|..||||||||||||.. ++..+.||||+|+|+.+|++.. ..+....+.+++|
T Consensus 188 ------~p~~~d~~d~~gHGThVAGiIAa~~---------ng~gv~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~a 252 (671)
T 1r6v_A 188 ------LPAGTDSSYGGSAGTHVAGTIAAKK---------DGKGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAG 252 (671)
T ss_dssp ------ECTTCBCCTTCSHHHHHHHHHHCCC---------SSSSCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHH
T ss_pred ------CCCCCCCccCCCcchhhhhhhhccC---------CCCceEEECCCCEEEEEEeccCccccCCCCccCHHHHHHH
Confidence 0011234567899999999999874 1234789999999999999986 1134556789999
Q ss_pred HHHHHhCCCcEEeecH--------HHHHHHHHHhcCcEEEEecCCCCCCC-CccCCCCCceEEecccccCCcccceEEeC
Q 042484 206 FDMAIHDGVDMLSVSL--------VAIGSFHAVQHGIVVVCSDGNEGLVD-VTLQNAAPRQIVVGASTMDRDLSNYVVLG 276 (620)
Q Consensus 206 i~~a~~~gvdVIn~Sl--------~~~~~~~a~~~Gv~vV~AAGN~G~~~-~t~~~~ap~vitVga~~~~~~~~~~~~~g 276 (620)
|+||+++|++|||||| +..+...|.++|+++|+||||+|... ...+...|++|+|||++.+...
T Consensus 253 i~~A~~~gadVIN~SlG~~~~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~~------- 325 (671)
T 1r6v_A 253 IIWATDHGAKVMNHSWGGWGYSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGGT------- 325 (671)
T ss_dssp HHHHHHTTCSEEEECEEBSCCCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETTE-------
T ss_pred HHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCCc-------
Confidence 9999999999999999 66777788899999999999999654 3344456999999997543220
Q ss_pred CCeEEEEeeccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccE
Q 042484 277 NNKRFKLISERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPA 356 (620)
Q Consensus 277 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~ 356 (620)
T Consensus 326 -------------------------------------------------------------------------------- 325 (671)
T 1r6v_A 326 -------------------------------------------------------------------------------- 325 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeecCCcceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee------------------------
Q 042484 357 SVITFNDGYYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK------------------------ 412 (620)
Q Consensus 357 ~~i~~~~g~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a------------------------ 412 (620)
..++.||++||. +||.|
T Consensus 326 ------------------------------------~~~a~fSn~G~~---vdv~APG~~I~St~p~~~~~g~~~~~~~~ 366 (671)
T 1r6v_A 326 ------------------------------------FRVAGFSSRSDG---VSVGAPGVTILSTVPGEDSIGYEGHNENV 366 (671)
T ss_dssp ------------------------------------EEECSSSCCCTT---EEEEEECSSEEEECCCTTSTTCCCCCTTC
T ss_pred ------------------------------------eeeccccCCCCC---eeEEecCCCEEeecCCCCccccccccccc
Confidence 001122222221 11111
Q ss_pred ---cCCCcEEeccccchhhhhhhhhhhhcccCCCCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccc
Q 042484 413 ---RRIPFNSISGTSMSGPYISGIAGLPKILHPDWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNL 489 (620)
Q Consensus 413 ---~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~ 489 (620)
..+.|..++|||||||||||++|||+|++|+|+|+|||++|++||+++... ..+..||+|+||+.+
T Consensus 367 ~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~-----------g~d~~~G~G~vna~~ 435 (671)
T 1r6v_A 367 PATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN-----------GWDHDTGYGLVKLDA 435 (671)
T ss_dssp CCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS-----------SCBTTTBTCBCCHHH
T ss_pred cccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC-----------CCCCCcccceeCHHH
Confidence 235799999999999999999999999999999999999999999987532 234689999999999
Q ss_pred cCCCceeeecCchh
Q 042484 490 AMDPGLVYYLTVND 503 (620)
Q Consensus 490 A~~~~lv~~~~~~d 503 (620)
|++..|..+....+
T Consensus 436 Al~~~l~~~~~~~~ 449 (671)
T 1r6v_A 436 ALQGPLPTQGGVEE 449 (671)
T ss_dssp HHHCCCCSSSEEEE
T ss_pred HhhhhcCCCCCccc
Confidence 99977765544333
No 9
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=5.9e-51 Score=454.54 Aligned_cols=321 Identities=15% Similarity=0.159 Sum_probs=40.6
Q ss_pred cceeEEecceeeeEEEEcCHHHHHHHhcCCCeEEEEeceeeeeccCCCccccCcccCCCCCCccccccCCCCCCcEEEEe
Q 042484 5 HAIFYSYTRHINGFAAKLADAVAAEMAKHPKVVSVFLSKEKKLHTTHSWEFLGLEQNGRIPPNSIWEKARYGEDIIIGNL 84 (620)
Q Consensus 5 ~~~~~~y~~~~~G~s~~~~~~~~~~L~~~~~V~~v~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~G~GV~VgVI 84 (620)
.++++.|+++|+||+++++++++++|+++|+|++|+|++.+..+ ...|.+-.+.... .....|..+.+|+||+||||
T Consensus 109 ~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~-~~pWgL~~i~~~~--~~~~~w~~~~~G~GV~VaVI 185 (692)
T 2p4e_P 109 TKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ-SIPWNLERITPPR--YRADEYQPPDGGSLVEVYLL 185 (692)
T ss_dssp CEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC------------------------------------
T ss_pred cceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC-CCCcchhhccccc--ccccccccCCCCCCcEEEEE
Confidence 47899999999999999999999999999999999999987653 2233322221110 01247888899999999999
Q ss_pred ccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCCCCCChhhhhHhhcccCCCC
Q 042484 85 DTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARDKNGHGSHTLSRAGGNFVAG 164 (620)
Q Consensus 85 DTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGiaag~~~~~ 164 (620)
|||||++||+|.+... |.+ .+ .+.+. ++ .....++.|..||||||||||+|+.
T Consensus 186 DTGId~~HpdL~gr~~------~~~-----~~-------~~~d~----dg--~~~~~~~~D~~GHGTHVAGiIAg~~--- 238 (692)
T 2p4e_P 186 DTSIQSDHREIEGRVM------VTD-----FE-------NVPEE----DG--TRFHRQASKCDSHGTHLAGVVSGRD--- 238 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCChhhcCceE------ecc-----cc-------cccCC----CC--CcccCCCCCCCCcHHHhhhHhhcCC---
Confidence 9999999999986311 110 00 00000 00 0001346789999999999999762
Q ss_pred CceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhC------CCcEEeecH-------HHHHHHHHHh
Q 042484 165 ASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHD------GVDMLSVSL-------VAIGSFHAVQ 231 (620)
Q Consensus 165 ~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~------gvdVIn~Sl-------~~~~~~~a~~ 231 (620)
.||||+|+|+++|++++. |.++.+++++||+|++++ +++|||||| +..++..+.+
T Consensus 239 -----------~GVAP~A~L~~vKVl~~~-G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~s~~l~~Ai~~A~~ 306 (692)
T 2p4e_P 239 -----------AGVAKGASMRSLRVLNCQ-GKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGYSRVLNAACQRLAR 306 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------CccCCCCEEEEEEeecCC-CCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCCcHHHHHHHHHHHH
Confidence 699999999999999987 778899999999999986 899999999 5566677889
Q ss_pred cCcEEEEecCCCCCCCCcc-CCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCCCceeeEEEccCCCcccc
Q 042484 232 HGIVVVCSDGNEGLVDVTL-QNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPSDKLFTFIRTLDPKKVKG 310 (620)
Q Consensus 232 ~Gv~vV~AAGN~G~~~~t~-~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 310 (620)
+|++||+||||+|++.... +...|++|+|||++.+....
T Consensus 307 ~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~a---------------------------------------- 346 (692)
T 2p4e_P 307 AGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQPV---------------------------------------- 346 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCcc----------------------------------------
Confidence 9999999999999754332 44569999999965332100
Q ss_pred cEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccCCCcEEEEeCCceeecCC
Q 042484 311 KILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFTRHPVGYIKRPTTEFGAK 390 (620)
Q Consensus 311 kivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~i~~~~~~~~~~ 390 (620)
T Consensus 347 -------------------------------------------------------------------------------- 346 (692)
T 2p4e_P 347 -------------------------------------------------------------------------------- 346 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCceeeccCCCCCCCCCceee-----------cCCCcEEeccccchhhhhhhhhhhhcccCCCCCHHHHHHHHHccccc
Q 042484 391 PAPYMAALSSKGPIHITPEILK-----------RRIPFNSISGTSMSGPYISGIAGLPKILHPDWSPAAVQSAIMTTATT 459 (620)
Q Consensus 391 ~~~~~a~FSS~GP~~~kPdi~a-----------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~ 459 (620)
..-+.||++|| +|||.| ....|..++|||||||||||++|||+|++|+|+|+|||++|++||.+
T Consensus 347 --~~ss~fSn~G~---~vDI~APG~~I~St~~~~~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~ 421 (692)
T 2p4e_P 347 --TLGTLGTNFGR---CVDLFAPGEDIIGASSDCSTCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAK 421 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --ccccccCCCCC---ceeEEecCCcEEeeccCCCCceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccc
Confidence 00012677776 566666 12578999999999999999999999999999999999999999976
Q ss_pred CCCCcceecc------CC---CCCCCCceecccc--cCccccCC
Q 042484 460 QDNKKQQILD------AS---FTEATPFSYGAGH--VQPNLAMD 492 (620)
Q Consensus 460 ~~~~~~~~~~------~~---~~~~~~~~~GaG~--vn~~~A~~ 492 (620)
......++.. .+ ..+.....+|+|+ .|++.+..
T Consensus 422 ~~~~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~~~s 465 (692)
T 2p4e_P 422 DVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 465 (692)
T ss_dssp --------------------------------------------
T ss_pred cccCCCCCccccCCCCcceeecCCCccccCCCCccccccccccC
Confidence 4322111100 00 0111345678888 77777654
No 10
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=8.3e-51 Score=430.35 Aligned_cols=281 Identities=18% Similarity=0.164 Sum_probs=186.0
Q ss_pred ccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccc----cc-cc-cCCCCCCCC
Q 042484 67 NSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQ----DY-AV-HKGPLNSSF 140 (620)
Q Consensus 67 ~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~----~~-~~-~~~~~~~~~ 140 (620)
.++|+++..|+||+|||||||||++||+|++....+....|...++.........+.++.+ ++ .. .......+.
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAVIPDT 100 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHHCTTT
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCccccccccccccccccCCC
Confidence 4899999999999999999999999999998666556666665444222100000000000 00 00 000001122
Q ss_pred CCCCCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCC----CCCCHHHHHHHHHHHHhCCCcE
Q 042484 141 YSARDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGM----GGCYDCDIIAAFDMAIHDGVDM 216 (620)
Q Consensus 141 ~~~~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~----g~~~~~~i~~ai~~a~~~gvdV 216 (620)
.++.|++||||||||||||+. +..+.||||+|+|+.+|++.... +.+...+++++|++|++.|++|
T Consensus 101 ~~~~D~~gHGThVAGiiag~~----------~~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~~V 170 (357)
T 4h6x_A 101 KDRIVLNDHACHVTSTIVGQE----------HSPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANI 170 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT----------TSSCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTCSE
T ss_pred CCCcCCCCcHHHHHHHHhccC----------CCCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcCCCE
Confidence 344577899999999999875 23478999999999999975432 2344567899999999999999
Q ss_pred EeecH------------HHHHHHHHHhcCcEEEEecCCCCCCCCccCCCCCceEEecccccCCcccceEEeCCCeEEEEe
Q 042484 217 LSVSL------------VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLI 284 (620)
Q Consensus 217 In~Sl------------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~ 284 (620)
||||| +..+..++.++|+++|+||||+|......+...|++|+|||++.+
T Consensus 171 in~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------ 232 (357)
T 4h6x_A 171 IHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD------------------ 232 (357)
T ss_dssp EEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT------------------
T ss_pred EeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC------------------
Confidence 99999 455667788999999999999997666666667899999995422
Q ss_pred eccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCc
Q 042484 285 SERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDG 364 (620)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g 364 (620)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee----------cCCCcEEeccccchhhhhhhhh
Q 042484 365 YYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK----------RRIPFNSISGTSMSGPYISGIA 434 (620)
Q Consensus 365 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a----------~~~~y~~~sGTSMAaP~VAG~a 434 (620)
+.++.||+||+...||||+| .++.|..++|||||||||||++
T Consensus 233 ----------------------------~~~~~fSn~G~~~~~~di~APG~~i~s~~~~~~~~~~~sGTS~AaP~vaG~~ 284 (357)
T 4h6x_A 233 ----------------------------GTPCHFSNWGGNNTKEGILAPGEEILGAQPCTEEPVRLTGTSMAAPVMTGIS 284 (357)
T ss_dssp ----------------------------SSBCTTCC---CTTTTEEEEECSSEEECCTTCSCCEEECSHHHHHHHHHHHH
T ss_pred ----------------------------CcccccccCCCCCCccceeecCCCeEeccCCCCcccccCcHHHHHHHHHHHH
Confidence 23567999999989999998 3445678999999999999999
Q ss_pred hhhcc----cCCCCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCC
Q 042484 435 GLPKI----LHPDWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMD 492 (620)
Q Consensus 435 ALl~~----~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 492 (620)
|||++ ++|.|+++|||++|++||++++... ...+.+||+|+||+.+|++
T Consensus 285 All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~---------~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 285 ALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV---------VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHC-----------------------CTTCBCCHHHHHH
T ss_pred HHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC---------CCCcccceeEEecHHHHHH
Confidence 99995 5678999999999999999875321 2345789999999999987
No 11
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=7.8e-49 Score=400.39 Aligned_cols=241 Identities=25% Similarity=0.373 Sum_probs=197.4
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARD 145 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D 145 (620)
+..+|+.+++|+||+|||||||||++||+|+.. .+. .+ . .....+.|
T Consensus 13 ~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~~---------~g~-----------------~~-~------~~~~~~~d 59 (274)
T 1r0r_E 13 ADKVQAQGFKGANVKVAVLDTGIQASHPDLNVV---------GGA-----------------SF-V------AGEAYNTD 59 (274)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCCCTTCTTCCEE---------EEE-----------------EC-S------TTCCTTCC
T ss_pred CHHHHhcCCCCCCCEEEEEcCCCCCCCHhHcCC---------CCc-----------------cc-c------CCCCCCCC
Confidence 458999999999999999999999999999510 010 01 0 01122567
Q ss_pred CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcEEeecH----
Q 042484 146 KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDGVDMLSVSL---- 221 (620)
Q Consensus 146 ~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~gvdVIn~Sl---- 221 (620)
..||||||||||+|.. +...+.||||+|+|+.+|++... +.+..++++++|+||++++++||||||
T Consensus 60 ~~gHGT~vAgiia~~~---------~~~g~~GvAp~a~l~~~~v~~~~-g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~ 129 (274)
T 1r0r_E 60 GNGHGTHVAGTVAALD---------NTTGVLGVAPSVSLYAVKVLNSS-GSGSYSGIVSGIEWATTNGMDVINMSLGGAS 129 (274)
T ss_dssp SSSHHHHHHHHHHCCS---------SSSBCCCSSTTSEEEEEECSCTT-SEECHHHHHHHHHHHHHTTCSEEEECEEBSS
T ss_pred CCCCHHHHHHHHHccC---------CCCceEEECCCCEEEEEEEECCC-CCccHHHHHHHHHHHHHcCCCEEEeCCCCCC
Confidence 8999999999999874 22457899999999999999877 678889999999999999999999999
Q ss_pred ----HHHHHHHHHhcCcEEEEecCCCCCCC----CccCCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCC
Q 042484 222 ----VAIGSFHAVQHGIVVVCSDGNEGLVD----VTLQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPS 293 (620)
Q Consensus 222 ----~~~~~~~a~~~Gv~vV~AAGN~G~~~----~t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 293 (620)
+..+..++.++|+++|+||||+|... ...+...+++|+||+++.+
T Consensus 130 ~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~--------------------------- 182 (274)
T 1r0r_E 130 GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN--------------------------- 182 (274)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT---------------------------
T ss_pred CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC---------------------------
Confidence 66777788899999999999999652 2223345889999985421
Q ss_pred CceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccC
Q 042484 294 DKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFT 373 (620)
Q Consensus 294 ~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 373 (620)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcEEeccccchhhhhhhhhhhhcccCCCC
Q 042484 374 RHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFNSISGTSMSGPYISGIAGLPKILHPDW 444 (620)
Q Consensus 374 ~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~ 444 (620)
+.++.||++|| +|||+| +.+.|..++|||||||||||++|||+|++|++
T Consensus 183 -------------------~~~~~~S~~G~---~~di~APG~~i~s~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~l 240 (274)
T 1r0r_E 183 -------------------SNRASFSSVGA---ELEVMAPGAGVYSTYPTNTYATLNGTSMASPHVAGAAALILSKHPNL 240 (274)
T ss_dssp -------------------SCBCTTCCCST---TEEEEEECSSEEEEETTTEEEEECSHHHHHHHHHHHHHHHHHHSTTC
T ss_pred -------------------CCcCccCCCCC---CceEEeCCCCeEeecCCCCEEEeccHHHHHHHHHHHHHHHHHHCCCC
Confidence 22456888887 577777 45679999999999999999999999999999
Q ss_pred CHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCC
Q 042484 445 SPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMD 492 (620)
Q Consensus 445 sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 492 (620)
+++|||++|++||+++. ++..||+|+||+.+|++
T Consensus 241 t~~~v~~~L~~tA~~~g--------------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 241 SASQVRNRLSSTATYLG--------------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp CHHHHHHHHHHTCBCCS--------------CHHHHTTCBCCHHHHTC
T ss_pred CHHHHHHHHHHhCcccC--------------CCCCcccCccCHHHHhC
Confidence 99999999999998762 35689999999999985
No 12
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=2e-48 Score=395.94 Aligned_cols=240 Identities=25% Similarity=0.369 Sum_probs=198.3
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARD 145 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D 145 (620)
+..+|+.+++|+||+|+|||||| .+||+|+.. .+ . ++ . ....++.|
T Consensus 13 ~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~~~---------~~-----~------------~~-~------~~~~~~~d 58 (269)
T 1gci_A 13 APAAHNRGLTGSGVKVAVLDTGI-STHPDLNIR---------GG-----A------------SF-V------PGEPSTQD 58 (269)
T ss_dssp HHHHHHTTCSCTTCEEEEEESCC-CCCTTCCEE---------EE-----E------------EC-S------TTCCSCSC
T ss_pred cHHHHhcCCCCCCCEEEEECCCC-CCCHhhccc---------CC-----c------------cc-C------CCCCCCCC
Confidence 45899999999999999999999 899999510 00 0 01 0 01123568
Q ss_pred CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcEEeecH----
Q 042484 146 KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDGVDMLSVSL---- 221 (620)
Q Consensus 146 ~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~gvdVIn~Sl---- 221 (620)
..||||||||||+|.. +...+.||||+|+|+.+|++... +.+..+++++||+||++++++||||||
T Consensus 59 ~~gHGT~vAgiia~~~---------~~~~~~GvAp~a~l~~~~v~~~~-g~~~~~~~~~ai~~a~~~~~~Vin~S~G~~~ 128 (269)
T 1gci_A 59 GNGHGTHVAGTIAALN---------NSIGVLGVAPSAELYAVKVLGAS-GSGSVSSIAQGLEWAGNNGMHVANLSLGSPS 128 (269)
T ss_dssp SSSHHHHHHHHHHCCC---------SSSBCCCSSTTCEEEEEECBCTT-SCBCHHHHHHHHHHHHHTTCSEEEECCCBSS
T ss_pred CCCChHHHHHHHhcCc---------CCCCcEEeCCCCEEEEEEeECCC-CCcCHHHHHHHHHHHHHCCCeEEEeCCCCCC
Confidence 8999999999999874 22457899999999999999887 678899999999999999999999999
Q ss_pred ----HHHHHHHHHhcCcEEEEecCCCCCCCCccCCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCCCcee
Q 042484 222 ----VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPSDKLF 297 (620)
Q Consensus 222 ----~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 297 (620)
+..+..++.++|+++|+||||+|......+...+++|+||+++.+
T Consensus 129 ~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------------- 177 (269)
T 1gci_A 129 PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN------------------------------- 177 (269)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT-------------------------------
T ss_pred CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC-------------------------------
Confidence 667777888999999999999997655556667899999995421
Q ss_pred eEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccCCCcE
Q 042484 298 TFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFTRHPV 377 (620)
Q Consensus 298 ~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~ 377 (620)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcEEeccccchhhhhhhhhhhhcccCCCCCHHH
Q 042484 378 GYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFNSISGTSMSGPYISGIAGLPKILHPDWSPAA 448 (620)
Q Consensus 378 ~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~sp~~ 448 (620)
+.++.||++||. |||+| +++.|..++|||||||||||++|||+|++|+|+++|
T Consensus 178 ---------------~~~~~~S~~G~~---~di~APG~~i~s~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~ 239 (269)
T 1gci_A 178 ---------------NNRASFSQYGAG---LDIVAPGVNVQSTYPGSTYASLNGTSMATPHVAGAAALVKQKNPSWSNVQ 239 (269)
T ss_dssp ---------------SCBCTTCCCSTT---EEEEEECSSEEEEETTTEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred ---------------CCCCCCCCCCCC---cceEecCCCeEeecCCCCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHH
Confidence 224567888873 56666 456799999999999999999999999999999999
Q ss_pred HHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCC
Q 042484 449 VQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMD 492 (620)
Q Consensus 449 ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 492 (620)
||++|++||+++. ++..||+|+||+.+|++
T Consensus 240 v~~~L~~tA~~~g--------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 240 IRNHLKNTATSLG--------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp HHHHHHHTSBCCS--------------CHHHHTTCBCCHHHHTC
T ss_pred HHHHHHHhCccCC--------------CCCCcccCccCHHHHcC
Confidence 9999999999763 35689999999999985
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=2.1e-48 Score=398.56 Aligned_cols=243 Identities=26% Similarity=0.384 Sum_probs=198.5
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARD 145 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D 145 (620)
+..+|..+++|+||+|||||||||++||+|+.. .+. .+ ...+..+..|
T Consensus 13 ~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~~---------~g~-----------------~~------~~~~~~~~~d 60 (281)
T 1to2_E 13 APALHSQGYTGSNVKVAVIDSGIDSSHPDLKVA---------GGA-----------------SM------VPSETNPFQD 60 (281)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCCCTTCTTCCEE---------EEE-----------------EC------CTTCCCTTCC
T ss_pred hHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcCc---------CCc-----------------cc------cCCCCCCCCC
Confidence 458999999999999999999999999999521 010 00 0001112367
Q ss_pred CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcEEeecH----
Q 042484 146 KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDGVDMLSVSL---- 221 (620)
Q Consensus 146 ~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~gvdVIn~Sl---- 221 (620)
..||||||||||+|.. +...+.||||+|+|+.+|++... +.+..++++++|+||++++++||||||
T Consensus 61 ~~gHGT~vAgiia~~~---------~~~g~~GvAp~a~l~~~kv~~~~-g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~ 130 (281)
T 1to2_E 61 NNSHGTHVAGTVAALN---------NSIGVLGVAPSASLYAVKVLGAD-GSGQYSWIINGIEWAIANNMDVINMSLGGPS 130 (281)
T ss_dssp SSSHHHHHHHHHHCCS---------SSSSBCCSSTTSEEEEEECSCTT-SEECHHHHHHHHHHHHHTTCSEEEECEEBSC
T ss_pred CCCcHHHHHHHHhccC---------CCCcceeeCCCCEEEEEEEeCCC-CCccHHHHHHHHHHHHHCCCcEEEECCcCCC
Confidence 8999999999999874 22447899999999999999877 667889999999999999999999999
Q ss_pred ----HHHHHHHHHhcCcEEEEecCCCCCCC----CccCCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCC
Q 042484 222 ----VAIGSFHAVQHGIVVVCSDGNEGLVD----VTLQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPS 293 (620)
Q Consensus 222 ----~~~~~~~a~~~Gv~vV~AAGN~G~~~----~t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 293 (620)
+..++..+.++|+++|+||||+|... ...+...|++|+|||++.+
T Consensus 131 ~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~--------------------------- 183 (281)
T 1to2_E 131 GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS--------------------------- 183 (281)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT---------------------------
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC---------------------------
Confidence 66777788899999999999999652 2223345889999985321
Q ss_pred CceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccC
Q 042484 294 DKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFT 373 (620)
Q Consensus 294 ~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 373 (620)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcEEeccccchhhhhhhhhhhhcccCCCC
Q 042484 374 RHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFNSISGTSMSGPYISGIAGLPKILHPDW 444 (620)
Q Consensus 374 ~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~ 444 (620)
+.++.||++|| +|||+| +++.|..++|||||||||||++|||+|++|+|
T Consensus 184 -------------------~~~~~fS~~G~---~~di~APG~~i~s~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~l 241 (281)
T 1to2_E 184 -------------------NQRASFSSVGP---ELDVMAPGVSIQSTLPGNKYGAYNGTSMASPHVAGAAALILSKHPNW 241 (281)
T ss_dssp -------------------SCBCTTCCCST---TCCEEEECSSEEEEETTTEEEEECBHHHHHHHHHHHHHHHHHHSTTC
T ss_pred -------------------CCcCCcCCCCC---CceEEecCCCeEeecCCCCEEecCcHHHHHHHHHHHHHHHHHhCCCC
Confidence 23457888888 567777 45679999999999999999999999999999
Q ss_pred CHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCCC
Q 042484 445 SPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMDP 493 (620)
Q Consensus 445 sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~~ 493 (620)
+++|||++|++||+++. +++.||+|+||+.+|+++
T Consensus 242 t~~~v~~~L~~tA~~~g--------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 242 TNTQVRSSLENTTTKLG--------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp CHHHHHHHHHTTCBCCS--------------CHHHHTTCBCCHHHHTSS
T ss_pred CHHHHHHHHHhhCcccC--------------CCCCcccceecHHHHhhh
Confidence 99999999999998762 356899999999999984
No 14
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=5.8e-48 Score=395.04 Aligned_cols=243 Identities=23% Similarity=0.291 Sum_probs=193.1
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARD 145 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D 145 (620)
+..+|+.+..|+||+|||||||||++||+|.+. ...+. ++ .....++.|
T Consensus 20 ~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~------------~~~~~------------~~-------~~~~~~~~d 68 (280)
T 1dbi_A 20 TDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK------------VIKGY------------DF-------VDNDYDPMD 68 (280)
T ss_dssp HHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT------------EEEEE------------ET-------TTTBSCCCC
T ss_pred cHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC------------cccce------------ec-------cCCCCCCCC
Confidence 468999988888999999999999999999753 00000 11 011234678
Q ss_pred CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcEEeecH----
Q 042484 146 KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDGVDMLSVSL---- 221 (620)
Q Consensus 146 ~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~gvdVIn~Sl---- 221 (620)
..||||||||||+|...+ ...+.||||+|+|+.+|++..+ |.+..+++++||++|++.|++||||||
T Consensus 69 ~~gHGT~vAgiia~~~~~--------~~g~~GvAp~a~l~~~kv~~~~-g~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~ 139 (280)
T 1dbi_A 69 LNNHGTHVAGIAAAETNN--------ATGIAGMAPNTRILAVRALDRN-GSGTLSDIADAIIYAADSGAEVINLSLGCDC 139 (280)
T ss_dssp SSSHHHHHHHHHHCCCSS--------SSSCCCSSSSCEEEEEECCCTT-SCCCHHHHHHHHHHHHHTTCSEEEECCSSCC
T ss_pred CCCcHHHHHHHHhCcCCC--------CCcceEeCCCCEEEEEEEECCC-CCcCHHHHHHHHHHHHHCCCCEEEeCCCCCC
Confidence 899999999999987533 2347899999999999999887 678899999999999999999999999
Q ss_pred ----HHHHHHHHHhcCcEEEEecCCCCCCCCccCCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCCCcee
Q 042484 222 ----VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPSDKLF 297 (620)
Q Consensus 222 ----~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 297 (620)
+..+..++.++|+++|+||||+|......+...+++|+|||++.+
T Consensus 140 ~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------------- 188 (280)
T 1dbi_A 140 HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY------------------------------- 188 (280)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT-------------------------------
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC-------------------------------
Confidence 667777888999999999999997655555667899999995422
Q ss_pred eEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccCCCcE
Q 042484 298 TFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFTRHPV 377 (620)
Q Consensus 298 ~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~ 377 (620)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcEEeccccchhhhhhhhhhhhcccCCCCCHHH
Q 042484 378 GYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFNSISGTSMSGPYISGIAGLPKILHPDWSPAA 448 (620)
Q Consensus 378 ~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~sp~~ 448 (620)
+.++.||++|| +|||+| +++.|..++|||||||||||++|||++ |++++.|
T Consensus 189 ---------------~~~~~~S~~G~---~~dv~ApG~~i~s~~~~~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~ 248 (280)
T 1dbi_A 189 ---------------DRLASFSNYGT---WVDVVAPGVDIVSTITGNRYAYMSGTSMASPHVAGLAALLAS--QGRNNIE 248 (280)
T ss_dssp ---------------SCBCTTBCCST---TCCEEEECSSEEEEETTTEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHH
T ss_pred ---------------CCcCCCCCCCC---CceEEEecCCeEeecCCCCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHH
Confidence 22456888886 467776 456899999999999999999999987 9999999
Q ss_pred HHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCC
Q 042484 449 VQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMD 492 (620)
Q Consensus 449 ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 492 (620)
||++|++||+++.. ....||+|+||+.+|++
T Consensus 249 v~~~L~~ta~~~~~-------------~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 249 IRQAIEQTADKISG-------------TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp HHHHHHHTSBCCTT-------------BTTTBSSEECCHHHHHT
T ss_pred HHHHHHHhCccCCC-------------CCCcccCCEECHHHHhc
Confidence 99999999998742 12469999999999986
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=3.5e-48 Score=405.24 Aligned_cols=248 Identities=24% Similarity=0.324 Sum_probs=196.1
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARD 145 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D 145 (620)
+..+|+.+++|+||+|||||||||++||+|.+. ...+. .|..++ ..+.....|
T Consensus 30 ~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~------------~~~~~--------~~~~~~-------~~~~~~~~d 82 (327)
T 2x8j_A 30 APAVWRASAKGAGQIIGVIDTGCQVDHPDLAER------------IIGGV--------NLTTDY-------GGDETNFSD 82 (327)
T ss_dssp HHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG------------EEEEE--------ECSSGG-------GGCTTCCCC
T ss_pred hHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc------------ccCCc--------cccCCC-------CCCCCCCCC
Confidence 458999999999999999999999999999752 11000 011111 001223568
Q ss_pred CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHh------CCCcEEee
Q 042484 146 KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIH------DGVDMLSV 219 (620)
Q Consensus 146 ~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~------~gvdVIn~ 219 (620)
+.||||||||||+|.. ++..+.||||+|+|+.+|++... |.+..+++++||++|++ .+++||||
T Consensus 83 ~~gHGT~VAgiia~~~---------~~~g~~GvAp~a~l~~~kv~~~~-g~~~~~~i~~ai~~a~~~~~~~~~~~~Vin~ 152 (327)
T 2x8j_A 83 NNGHGTHVAGTVAAAE---------TGSGVVGVAPKADLFIIKALSGD-GSGEMGWIAKAIRYAVDWRGPKGEQMRIITM 152 (327)
T ss_dssp SSSHHHHHHHHHHCCC---------CSSBCCCSSTTCEEEEEECSCTT-SEECHHHHHHHHHHHHHCCCTTSCCCSEEEE
T ss_pred CCCchHHHHHHHhccC---------CCCCcEeeCCCCEEEEEEeECCC-CCcCHHHHHHHHHHHHhhcccccCCceEEEE
Confidence 8999999999999884 12457899999999999999887 67888999999999999 89999999
Q ss_pred cH--------HHHHHHHHHhcCcEEEEecCCCCCCC-----CccCCCCCceEEecccccCCcccceEEeCCCeEEEEeec
Q 042484 220 SL--------VAIGSFHAVQHGIVVVCSDGNEGLVD-----VTLQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISE 286 (620)
Q Consensus 220 Sl--------~~~~~~~a~~~Gv~vV~AAGN~G~~~-----~t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~ 286 (620)
|| +..++..+.++|++||+||||+|... ...+...+++|+|||++.+
T Consensus 153 S~G~~~~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~-------------------- 212 (327)
T 2x8j_A 153 SLGGPTDSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD-------------------- 212 (327)
T ss_dssp CEEBSCCCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT--------------------
T ss_pred CCCcCCCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC--------------------
Confidence 99 66677788899999999999999642 2233345899999995422
Q ss_pred cCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcce
Q 042484 287 RAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYY 366 (620)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~ 366 (620)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcEEeccccchhhhhhhhhhhh
Q 042484 367 NLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFNSISGTSMSGPYISGIAGLP 437 (620)
Q Consensus 367 l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG~aALl 437 (620)
+.++.||++|| +|||+| +++.|..++|||||||||||++|||
T Consensus 213 --------------------------~~~~~fS~~G~---~~di~APG~~i~s~~~~~~~~~~sGTS~AaP~VaG~aAll 263 (327)
T 2x8j_A 213 --------------------------LRLSDFTNTNE---EIDIVAPGVGIKSTYLDSGYAELSGTAMAAPHVAGALALI 263 (327)
T ss_dssp --------------------------CCBSCC---CC---CCSEEEECSSEEEECSTTCEEEEESGGGTHHHHHHHHHHH
T ss_pred --------------------------CCCCCccCCCC---CceEecCcCceEeecCCCCEEeecCHHHHHHHHHHHHHHH
Confidence 23456888887 677777 4668999999999999999999999
Q ss_pred ccc-----CCCCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCC
Q 042484 438 KIL-----HPDWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMD 492 (620)
Q Consensus 438 ~~~-----~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 492 (620)
+|+ +|.+++.|||++|++||+++. .++..+|+|+||+.+|++
T Consensus 264 ~~~~~~~~~p~ls~~~v~~~L~~tA~~~g-------------~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 264 INLAEDAFKRSLSETEIYAQLVRRATPIG-------------FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHTTEECCS-------------SCHHHHTTCEECTTHHHH
T ss_pred HHhhhhhcCCCCCHHHHHHHHHHhCccCC-------------CCCCceeeeEECHHHHHH
Confidence 999 999999999999999999763 245789999999999988
No 16
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=2.7e-48 Score=398.49 Aligned_cols=245 Identities=20% Similarity=0.191 Sum_probs=191.0
Q ss_pred CCC-CCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCCCCCChhh
Q 042484 74 RYG-EDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARDKNGHGSH 152 (620)
Q Consensus 74 ~~G-~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D~~gHGTH 152 (620)
.+| +||+|||||||||++||+|.+.. +.+ .+ ++. +.......|.+|||||
T Consensus 4 l~G~~gV~VaViDtGid~~Hpdl~g~~-------~~~-----~~-------~~~----------~~~~~~d~~~~gHGT~ 54 (282)
T 3zxy_A 4 LKGDHNIRVAILDGPVDIAHPCFQGAD-------LTV-----LP-------TLA----------PTAARSDGFMSAHGTH 54 (282)
T ss_dssp CCCCTTSEEEEEESCCCTTSGGGTTCE-------EEE-----CC-------CSS----------CCCCCTTCHHHHHHHH
T ss_pred CcCCCCCEEEEEcCCCCCCChhHCCCe-------eec-----Cc-------CCC----------CCCCCCCCCCCCcccc
Confidence 578 79999999999999999997531 110 00 000 0011223346799999
Q ss_pred hhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcEEeecH-----------
Q 042484 153 TLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDGVDMLSVSL----------- 221 (620)
Q Consensus 153 VAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~gvdVIn~Sl----------- 221 (620)
|||||+|+. +..+.||||+|+|+.+|++.+..+......++++|+||++.+++||||||
T Consensus 55 VAGiiag~~----------~~~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~ 124 (282)
T 3zxy_A 55 VASIIFGQP----------ETSVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADG 124 (282)
T ss_dssp HHHHHHCCT----------TSSSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCH
T ss_pred eeehhhccC----------CceeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccccccccccH
Confidence 999999875 23478999999999999986653457788999999999999999999999
Q ss_pred -HHHHHHHHHhcCcEEEEecCCCCCCCCccCCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCCCceeeEE
Q 042484 222 -VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPSDKLFTFI 300 (620)
Q Consensus 222 -~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 300 (620)
+..+...+.++|+++|+||||+|......+...+++|+|||++.+
T Consensus 125 ~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------------------------- 170 (282)
T 3zxy_A 125 WLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH---------------------------------- 170 (282)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT----------------------------------
T ss_pred HHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC----------------------------------
Confidence 566677888999999999999997766666667999999995422
Q ss_pred EccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccCCCcEEEE
Q 042484 301 RTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFTRHPVGYI 380 (620)
Q Consensus 301 ~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~i 380 (620)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcEEeccccchhhhhhhhhhhhcccC----CCCCHH
Q 042484 381 KRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFNSISGTSMSGPYISGIAGLPKILH----PDWSPA 447 (620)
Q Consensus 381 ~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG~aALl~~~~----P~~sp~ 447 (620)
+.++.||+||+...||||+| +++.|..++|||||||||||++|||++++ |.++|+
T Consensus 171 ------------~~~~~~S~~~~~~~~~di~ApG~~i~s~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~ 238 (282)
T 3zxy_A 171 ------------GHPLDFSNWGSTYEQQGILAPGEDILGAKPGGGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQ 238 (282)
T ss_dssp ------------SCBCSSSCCCHHHHHHEEEEECSSEEEECTTSCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred ------------CccccccCCCCCccccceeccCcceeeecCCCceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHH
Confidence 12345677777666777776 56789999999999999999999999874 789999
Q ss_pred HHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCC
Q 042484 448 AVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMD 492 (620)
Q Consensus 448 ~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 492 (620)
|||++|++||++++.. .+.....+|+|+||+.+|++
T Consensus 239 ~vk~~L~~tA~~~~~~---------~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 239 KVRQLLLQSALPCDDD---------APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHHHHCBCC----------------CGGGTTCBCCHHHHHH
T ss_pred HHHHHHHhhCeeCCCC---------CCCccCceeeeEeCHHHHHH
Confidence 9999999999876532 23445689999999999987
No 17
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=4e-47 Score=388.79 Aligned_cols=242 Identities=24% Similarity=0.318 Sum_probs=197.1
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARD 145 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D 145 (620)
+..+|+.. +|+||+|||||||||++||+|.+. .+.+ . ++ ......+.|
T Consensus 20 ~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~-------~~~~-----~------------~~-------~~~~~~~~d 67 (279)
T 1thm_A 20 APQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK-------VVGG-----W------------DF-------VDNDSTPQN 67 (279)
T ss_dssp HHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT-------EEEE-----E------------ET-------TTTBSCCCC
T ss_pred hHHHHhcC-CCCCCEEEEEccCCCCCCcchhcC-------cccc-----c------------cc-------cCCCCCCCC
Confidence 46899887 799999999999999999999853 0011 0 11 011234578
Q ss_pred CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcEEeecH----
Q 042484 146 KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDGVDMLSVSL---- 221 (620)
Q Consensus 146 ~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~gvdVIn~Sl---- 221 (620)
..||||||||||+|...+ ...+.||||+|+|+.+|++... |.++.+++++||++|+++|++||||||
T Consensus 68 ~~gHGT~vAgiia~~~~n--------~~g~~GvAp~a~l~~~~v~~~~-g~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~ 138 (279)
T 1thm_A 68 GNGHGTHCAGIAAAVTNN--------STGIAGTAPKASILAVRVLDNS-GSGTWTAVANGITYAADQGAKVISLSLGGTV 138 (279)
T ss_dssp SSSHHHHHHHHHHCCCSS--------SSSCCCSSTTCEEEEEECSCTT-SCCCHHHHHHHHHHHHHTTCSEEEECCCBSS
T ss_pred CCCcHHHHHHHHhCccCC--------CCccEEeCCCCEEEEEEeeCCC-CCccHHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 899999999999987633 2347899999999999999887 678889999999999999999999999
Q ss_pred ----HHHHHHHHHhcCcEEEEecCCCCCCCCccCCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCCCcee
Q 042484 222 ----VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPSDKLF 297 (620)
Q Consensus 222 ----~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 297 (620)
+..+..++.++|+++|+||||+|......+...+++|+||+++.+
T Consensus 139 ~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------------- 187 (279)
T 1thm_A 139 GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN------------------------------- 187 (279)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT-------------------------------
T ss_pred CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC-------------------------------
Confidence 667777888999999999999997665666667899999985422
Q ss_pred eEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccCCCcE
Q 042484 298 TFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFTRHPV 377 (620)
Q Consensus 298 ~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~ 377 (620)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcEEeccccchhhhhhhhhhhhcccCCCCCHHH
Q 042484 378 GYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFNSISGTSMSGPYISGIAGLPKILHPDWSPAA 448 (620)
Q Consensus 378 ~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~sp~~ 448 (620)
+.++.||++|| +|||+| +.+.|..++|||||||||||++||| ++|.++++|
T Consensus 188 ---------------~~~~~fS~~G~---~~dv~APG~~i~s~~~~~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~ 247 (279)
T 1thm_A 188 ---------------DNKSSFSTYGS---WVDVAAPGSSIYSTYPTSTYASLSGTSMATPHVAGVAGLL--ASQGRSASN 247 (279)
T ss_dssp ---------------SCBCTTCCCCT---TCCEEEECSSEEEEETTTEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHH
T ss_pred ---------------CCcCCcCCCCC---ceEEEEcCCCeEEEeCCCCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHH
Confidence 22456788886 466666 4567999999999999999999999 589999999
Q ss_pred HHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCC
Q 042484 449 VQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMD 492 (620)
Q Consensus 449 ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 492 (620)
||++|++||+++... ...||+|+||+.+|++
T Consensus 248 v~~~L~~ta~~~~~~-------------~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 248 IRAAIENTADKISGT-------------GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp HHHHHHHTCBCCTTB-------------TTTBSSEECCHHHHHH
T ss_pred HHHHHHHhCccCCCC-------------CccccCCeeCHHHHhc
Confidence 999999999987432 1468999999999975
No 18
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=4.1e-48 Score=402.02 Aligned_cols=252 Identities=20% Similarity=0.236 Sum_probs=198.4
Q ss_pred ccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCCC
Q 042484 67 NSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARDK 146 (620)
Q Consensus 67 ~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D~ 146 (620)
+++|+.+..++||+|||||||||++||+|.+..+ .+. . .+.. .+.....|.
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~~-------~~~----~--------~~~~----------~~~~~~~d~ 61 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGADL-------TRL----P--------SLVS----------GEANANGSM 61 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTCEE-------EEC----C----------------------------CCC
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCCcc-------cCC----C--------cccC----------CCCCCCCCC
Confidence 4899998877999999999999999999985311 100 0 0000 012223467
Q ss_pred CCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcEEeecH-----
Q 042484 147 NGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDGVDMLSVSL----- 221 (620)
Q Consensus 147 ~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~gvdVIn~Sl----- 221 (620)
.||||||||||+|+. ++.+.||||+|+|+.+|++.+..+.+....+++||+||++++++|||+||
T Consensus 62 ~gHGThVAGiiag~~----------~~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g~~~~ 131 (306)
T 4h6w_A 62 STHGTHVASIIFGQH----------DSPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAGQLTD 131 (306)
T ss_dssp CHHHHHHHHHHHCCT----------TSSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCCEEES
T ss_pred CCchHHHHHHHHccc----------cCCcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeecccccccc
Confidence 899999999999874 23478999999999999987653567888999999999999999999999
Q ss_pred -------HHHHHHHHHhcCcEEEEecCCCCCCCCccCCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCCC
Q 042484 222 -------VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPSD 294 (620)
Q Consensus 222 -------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~ 294 (620)
+..+...+.++|+++|+++||+|......+...+++|+|+|++.+.
T Consensus 132 ~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~~--------------------------- 184 (306)
T 4h6w_A 132 AGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQG--------------------------- 184 (306)
T ss_dssp SSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTTS---------------------------
T ss_pred CCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCCC---------------------------
Confidence 5667778889999999999999976655666678999999854222
Q ss_pred ceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccCC
Q 042484 295 KLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFTR 374 (620)
Q Consensus 295 ~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~ 374 (620)
T Consensus 185 -------------------------------------------------------------------------------- 184 (306)
T 4h6w_A 185 -------------------------------------------------------------------------------- 184 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcEEeccccchhhhhhhhhhhhcc----cC
Q 042484 375 HPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFNSISGTSMSGPYISGIAGLPKI----LH 441 (620)
Q Consensus 375 ~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG~aALl~~----~~ 441 (620)
.++.||++|+...+|||+| +++.|..++|||||||||||++|||++ ++
T Consensus 185 -------------------~~~~~s~~g~~~~~~di~APG~~i~s~~~~~~~~~~sGTS~AaP~VaG~~All~s~~~~~~ 245 (306)
T 4h6w_A 185 -------------------KPVDFSNWGDAYQKQGILAPGKDILGAKPNGGTIRLSGTSFATPIVSGVAALLLSLQIKRG 245 (306)
T ss_dssp -------------------CBCSSSCBCHHHHHHEEEEECSSEEEECTTSCEEEECSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------CccccccccCCcCcceeecCCcCcccccCCCceeccCCCcchhHHHHHHHHHHHHHHHhhC
Confidence 2335666666666666666 567899999999999999999999985 46
Q ss_pred CCCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCC
Q 042484 442 PDWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMD 492 (620)
Q Consensus 442 P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 492 (620)
|.|+|+|||++|++||+++...+ ......||+|+||+.+|++
T Consensus 246 p~~t~~~v~~~L~~tA~~~~~~~---------~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 246 EKPDPQKVKNALLASATPCNPKD---------TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp CCCCHHHHHHHHHHTCBCCCTTT---------CSCGGGGTTCBCCHHHHHH
T ss_pred CCCCHHHHHHHHHhhCccCCCCC---------CCCCCCcceeecCHHHHHH
Confidence 99999999999999999875432 2234579999999999997
No 19
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=8.1e-47 Score=392.86 Aligned_cols=263 Identities=29% Similarity=0.344 Sum_probs=203.5
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARD 145 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D 145 (620)
+..+|+.+++|+||+|||||||||++||+|.+. +..+. +| . ...+.......|
T Consensus 15 ~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~------------~~~~~------------~~-~--~~~~~~~~~~~d 67 (310)
T 2ixt_A 15 NNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN------------VEQCK------------DF-T--GATTPINNSCTD 67 (310)
T ss_dssp TCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT------------EEEEE------------ES-S--SSSSCEETCCCC
T ss_pred chhhhhccCCCCCcEEEEEecCCCCCCHHHhhc------------ccccc------------cc-c--CCCCCCCCCCCC
Confidence 358999999999999999999999999999753 11000 01 0 000011223568
Q ss_pred CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCC-----cEEeec
Q 042484 146 KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDGV-----DMLSVS 220 (620)
Q Consensus 146 ~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~gv-----dVIn~S 220 (620)
..||||||||||+|.... +...+.||||+|+|+.+|++.+. |.+..++++++|++|+++++ +|||||
T Consensus 68 ~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~-g~~~~~~~~~ai~~a~~~~~~~~~~~Vin~S 139 (310)
T 2ixt_A 68 RNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDS-GSGYSDDIAAAIRHAADQATATGTKTIISMS 139 (310)
T ss_dssp SSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTT-SCCCHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCC-CCCcHHHHHHHHHHHHHhhhccCCCeEEEEc
Confidence 899999999999988522 23457899999999999999887 67789999999999999988 999999
Q ss_pred H--------HHHHHHHHHhcCcEEEEecCCCCCCCCccCC--CCCceEEecccccCCcccceEEeCCCeEEEEeeccCCC
Q 042484 221 L--------VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQN--AAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKG 290 (620)
Q Consensus 221 l--------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~--~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~ 290 (620)
| +..+..++.++|++||+||||+|....+... ..+++|+|||++.... +
T Consensus 140 ~G~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~--------~------------- 198 (310)
T 2ixt_A 140 LGSSANNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ--------N------------- 198 (310)
T ss_dssp CCBSSCCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE--------T-------------
T ss_pred CCCCCCCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc--------C-------------
Confidence 9 6667778889999999999999976444433 4589999999541100 0
Q ss_pred CCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeec
Q 042484 291 LPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFF 370 (620)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~ 370 (620)
T Consensus 199 -------------------------------------------------------------------------------- 198 (310)
T 2ixt_A 199 -------------------------------------------------------------------------------- 198 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCcEEEEeCCceeecCCCCCceeeccCCCCC---------CCCCceee---------cCCCcEEeccccchhhhhhh
Q 042484 371 TFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPI---------HITPEILK---------RRIPFNSISGTSMSGPYISG 432 (620)
Q Consensus 371 ~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~---------~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG 432 (620)
....++.||++||. +.||||+| ..+.|..++|||||||||||
T Consensus 199 --------------------g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s~~~~~~~~~~sGTS~AaP~vaG 258 (310)
T 2ixt_A 199 --------------------GTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYNGGYNTISGTSMATPHVSG 258 (310)
T ss_dssp --------------------TEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEEECTTSSEEEECSHHHHHHHHHH
T ss_pred --------------------CCeeeccccCCCCccCCccccccCCCeeEECCCCCEeeecCCCCEEeeccHHHHHHHHHH
Confidence 00135678999984 24899998 46789999999999999999
Q ss_pred hhhhhcccCCCCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCcc
Q 042484 433 IAGLPKILHPDWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPN 488 (620)
Q Consensus 433 ~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~ 488 (620)
++|||+|++|+|+++|||++|++||++++..+. ....+.....+|+|++|+.
T Consensus 259 ~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~----~~a~~g~d~~~G~G~~~vq 310 (310)
T 2ixt_A 259 LAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG----YGAAIGDDYASGFGFARVQ 310 (310)
T ss_dssp HHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS----TTCCSSSBTTTBTCBCCC-
T ss_pred HHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC----cccccCCccccccceeecC
Confidence 999999999999999999999999998764321 1123456788999999863
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=4.4e-47 Score=396.22 Aligned_cols=253 Identities=25% Similarity=0.350 Sum_probs=198.0
Q ss_pred CccccccCCCCC--CcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGE--DIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSA 143 (620)
Q Consensus 66 ~~~~~~~~~~G~--GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 143 (620)
+..+|+.+ +|+ ||+|||||||||++||+|.+. .+.+.. |..+ .......+.
T Consensus 17 ~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~-------~~~~~~-------------~~~~------~~~~~~~~~ 69 (320)
T 2z30_A 17 APSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN-------IAWCVS-------------TLRG------KVSTKLRDC 69 (320)
T ss_dssp CGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG-------EEEEEE-------------CGGG------CCBCCHHHH
T ss_pred hHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc-------cccCcc-------------ccCC------ccCCCCCCC
Confidence 46899988 999 999999999999999999752 111100 0000 000011123
Q ss_pred CCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhC-----------
Q 042484 144 RDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHD----------- 212 (620)
Q Consensus 144 ~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~----------- 212 (620)
.|..||||||||||+|.. +...+.||||+|+|+.+|++... |.+..++++++|+||++.
T Consensus 70 ~d~~gHGT~vAgiia~~~---------n~~g~~GvAp~a~l~~~~v~~~~-g~~~~~~i~~ai~~a~~~~~~~~~~~~~~ 139 (320)
T 2z30_A 70 ADQNGHGTHVIGTIAALN---------NDIGVVGVAPGVQIYSVRVLDAR-GSGSYSDIAIGIEQAILGPDGVADKDGDG 139 (320)
T ss_dssp BCSSSHHHHHHHHHHCCS---------SSBSCCCSSTTCEEEEEECSCTT-SEEEHHHHHHHHHHHHHTTTTCSCTTSSS
T ss_pred CCCCCCHHHHHHHHHccc---------CCCceEeeCCCCEEEEEEeeCCC-CCccHHHHHHHHHHHHhCccccccccccc
Confidence 578899999999999873 22457899999999999999877 778889999999999987
Q ss_pred ---------CCcEEeecH--------HHHHHHHHHhcCcEEEEecCCCCCCCCccCCCCCceEEecccccCCcccceEEe
Q 042484 213 ---------GVDMLSVSL--------VAIGSFHAVQHGIVVVCSDGNEGLVDVTLQNAAPRQIVVGASTMDRDLSNYVVL 275 (620)
Q Consensus 213 ---------gvdVIn~Sl--------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~~~~ap~vitVga~~~~~~~~~~~~~ 275 (620)
+++|||||| +..++.++.++|++||+||||+|......+...|++|+|||++.+
T Consensus 140 ~~~~~~~~~~~~Vin~S~G~~~~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--------- 210 (320)
T 2z30_A 140 IIAGDPDDDAAEVISMSLGGPADDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN--------- 210 (320)
T ss_dssp CCTTCTTSCCCSEEEECEEBSCCCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT---------
T ss_pred ccccccccCCceEEEecCCCCCCCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCCC---------
Confidence 999999999 566777788999999999999997655666667999999995422
Q ss_pred CCCeEEEEeeccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCcccc
Q 042484 276 GNNKRFKLISERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLP 355 (620)
Q Consensus 276 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p 355 (620)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeecCCcceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCCCCC--ceee--cCCCcEEeccccchhhhhh
Q 042484 356 ASVITFNDGYYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITP--EILK--RRIPFNSISGTSMSGPYIS 431 (620)
Q Consensus 356 ~~~i~~~~g~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kP--di~a--~~~~y~~~sGTSMAaP~VA 431 (620)
+.++.||++||....| +|.. +.+.|..++||||||||||
T Consensus 211 -------------------------------------~~~~~~S~~g~~v~APG~~i~s~~~~~~~~~~sGTS~AaP~va 253 (320)
T 2z30_A 211 -------------------------------------DNIASFSNRQPEVSAPGVDILSTYPDDSYETLMGTAMATPHVS 253 (320)
T ss_dssp -------------------------------------SCBCTTSCSSCSEEEECSSEEEEETTTEEEEECSHHHHHHHHH
T ss_pred -------------------------------------CCcCcccCCCCCEEeCCCCeEEeccCCCeEeccCHHHHHHHHH
Confidence 1234567777643222 1222 5678999999999999999
Q ss_pred hhhhhhcccC-------------CCCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCC
Q 042484 432 GIAGLPKILH-------------PDWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMD 492 (620)
Q Consensus 432 G~aALl~~~~-------------P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 492 (620)
|++|||+|++ |++++.|||++|++||+++.. +.....||+|+||+.+|++
T Consensus 254 G~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~-----------~g~~~~~G~G~vd~~~A~~ 316 (320)
T 2z30_A 254 GVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP-----------TGWDADYGYGVVRAALAVQ 316 (320)
T ss_dssp HHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSS-----------SSSBTTTBTCBCCHHHHHH
T ss_pred HHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhCccCCC-----------CCCCCCcCCceeCHHHHHH
Confidence 9999999999 999999999999999998743 2235679999999999987
No 21
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=2.4e-46 Score=394.43 Aligned_cols=267 Identities=22% Similarity=0.304 Sum_probs=200.1
Q ss_pred CCccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCC----------C-CCcccCccccccccccC
Q 042484 65 PPNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDK----------D-ARFHCNRYFNQDYAVHK 133 (620)
Q Consensus 65 ~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~----------~-~~~~~n~~~~~~~~~~~ 133 (620)
.+..+|+.+++|+||+||||||||| +||+|.+.- +.+...... + ..+..+.|+.... .
T Consensus 20 ~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~ 88 (340)
T 3lpc_A 20 KADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANV-------LPGYDFISNSQISLDGDGRDADPFDEGDWFDNWA---C 88 (340)
T ss_dssp CHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGB-------CCCEECCCCHHHHCSSSSSBSCCBCCCCCBCTTT---T
T ss_pred CHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccc-------ccCccccCCccccccCCCccCCcccccccccccc---c
Confidence 3569999999999999999999998 999997531 111111100 0 0000000111000 0
Q ss_pred CCCCCCCCCCCCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHh--
Q 042484 134 GPLNSSFYSARDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIH-- 211 (620)
Q Consensus 134 ~~~~~~~~~~~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~-- 211 (620)
...+.+.....|..||||||||||+|...+ ...+.||||+|+|+.+|++... + +..++++++|+||++
T Consensus 89 ~~~~~~~~~~~d~~gHGT~vAgiia~~~~~--------~~g~~GvAp~a~l~~~~v~~~~-~-~~~~~~~~ai~~a~~~~ 158 (340)
T 3lpc_A 89 GGRPDPRKERSDSSWHGSHVAGTIAAVTNN--------RIGVAGVAYGAKVVPVRALGRC-G-GYDSDISDGLYWAAGGR 158 (340)
T ss_dssp SCTTCGGGSCBCCCCHHHHHHHHHHCCCSS--------SSSCCCTTTTSEEEEEECCBTT-B-CCHHHHHHHHHHHHTCC
T ss_pred cCCCCcccCCCCCCCCHHHHHHHHHccCCC--------CCcceeecCCCEEEEEEEecCC-C-CcHHHHHHHHHHHhccc
Confidence 011222344678999999999999998643 2347899999999999999887 5 789999999999998
Q ss_pred --------CCCcEEeecH---------HHHHHHHHHhcCcEEEEecCCCCCCCC-ccCCCCCceEEecccccCCcccceE
Q 042484 212 --------DGVDMLSVSL---------VAIGSFHAVQHGIVVVCSDGNEGLVDV-TLQNAAPRQIVVGASTMDRDLSNYV 273 (620)
Q Consensus 212 --------~gvdVIn~Sl---------~~~~~~~a~~~Gv~vV~AAGN~G~~~~-t~~~~ap~vitVga~~~~~~~~~~~ 273 (620)
.+++|||||| +..+..++.++|++||+||||+|.... ..+...+++|+|||++.+.
T Consensus 159 ~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~~------ 232 (340)
T 3lpc_A 159 IAGIPENRNPAKVINMSLGSDGQCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSRG------ 232 (340)
T ss_dssp CTTSCCCSSCCSEEEECCCEESCCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTTS------
T ss_pred ccccccccCCCeEEEeCcCCCCCcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCCC------
Confidence 8999999999 556677788999999999999996543 2344578999999964222
Q ss_pred EeCCCeEEEEeeccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCcc
Q 042484 274 VLGNNKRFKLISERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHV 353 (620)
Q Consensus 274 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~ 353 (620)
T Consensus 233 -------------------------------------------------------------------------------- 232 (340)
T 3lpc_A 233 -------------------------------------------------------------------------------- 232 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEeecCCcceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceeec----------------CCCc
Q 042484 354 LPASVITFNDGYYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILKR----------------RIPF 417 (620)
Q Consensus 354 ~p~~~i~~~~g~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a~----------------~~~y 417 (620)
.++.||++|| ||||+|+ .+.|
T Consensus 233 ----------------------------------------~~~~~S~~g~---~~di~ApG~~i~s~~~~~~~~~~~~~~ 269 (340)
T 3lpc_A 233 ----------------------------------------IRASFSNYGV---DVDLAAPGQDILSTVDSGTRRPVSDAY 269 (340)
T ss_dssp ----------------------------------------SBCTTCCBST---TCCEEEECSSEEEEEESCSSSCCSEEE
T ss_pred ----------------------------------------CcCCCCCCCC---CceEEecCCCeecccCCCCcCCCCCcc
Confidence 2345777776 5666661 2348
Q ss_pred EEeccccchhhhhhhhhhhhccc-C---CCCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCCC
Q 042484 418 NSISGTSMSGPYISGIAGLPKIL-H---PDWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMDP 493 (620)
Q Consensus 418 ~~~sGTSMAaP~VAG~aALl~~~-~---P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~~ 493 (620)
..++|||||||||||++|||+|+ + |.+++++||++|++||+++.. .....||+|+||+.+|++.
T Consensus 270 ~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 270 SFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS------------CCSSCCCSSBCCHHHHHHH
T ss_pred eecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC------------CCCCCcccceecHHHHHHH
Confidence 99999999999999999999988 5 999999999999999998641 2356899999999999874
No 22
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=3.5e-46 Score=394.07 Aligned_cols=251 Identities=14% Similarity=0.079 Sum_probs=196.5
Q ss_pred CccccccCCCCC--CcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGE--DIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSA 143 (620)
Q Consensus 66 ~~~~~~~~~~G~--GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 143 (620)
...+|+. .+|+ ||+||||||||| +||+|.+. .+.+... ..++ .+.....+
T Consensus 32 ~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~-------~~~~~~~------------~~~~-------~~~~~~~~ 83 (347)
T 2iy9_A 32 LTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS-------EFAKFSF------------TQDG-------SPFPVKKS 83 (347)
T ss_dssp CCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC-------EEEEEEC------------BTTC-------CSSCCSSS
T ss_pred hHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC-------cccCCcc------------cCCC-------CCCCCCCC
Confidence 3589988 8999 999999999999 99999753 1111110 0000 01112245
Q ss_pred CCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhC------CCcEE
Q 042484 144 RDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHD------GVDML 217 (620)
Q Consensus 144 ~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~------gvdVI 217 (620)
.|..||||||||||+|+. .+.||||+|+|+.+|++.+. + .. ++++||+||+++ |++||
T Consensus 84 ~d~~gHGT~vAgiia~~~------------g~~GvAp~a~l~~~~v~~~~-~-~~--~~~~ai~~a~~~~~~~~~~~~Vi 147 (347)
T 2iy9_A 84 EALYIHGTAMASLIASRY------------GIYGVYPHALISSRRVIPDG-V-QD--SWIRAIESIMSNVFLAPGEEKII 147 (347)
T ss_dssp HHHHHHHHHHHHHHHCSS------------SSCCSSTTCEEEEEECCSSB-C-TT--HHHHHHHHHHTCTTSCTTEEEEE
T ss_pred CCCCCcHHHHHHHHhccc------------CCcccCCCCEEEEEEEecCC-C-HH--HHHHHHHHHHhhhhcccCCceEE
Confidence 678899999999999871 25899999999999999765 3 22 999999999999 99999
Q ss_pred eecH-----------HHHHHHHHHhcCcEEEEecCCCCCCC-------CccCCCCC----------ceEEeccccc--CC
Q 042484 218 SVSL-----------VAIGSFHAVQHGIVVVCSDGNEGLVD-------VTLQNAAP----------RQIVVGASTM--DR 267 (620)
Q Consensus 218 n~Sl-----------~~~~~~~a~~~Gv~vV~AAGN~G~~~-------~t~~~~ap----------~vitVga~~~--~~ 267 (620)
|||| +..+...+.++|+++|+||||+|... ...+...+ ++|+|||++. +.
T Consensus 148 n~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~~g 227 (347)
T 2iy9_A 148 NISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRKG 227 (347)
T ss_dssp EESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCCTT
T ss_pred EeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCCCC
Confidence 9999 56667788899999999999999643 23333457 8999998653 11
Q ss_pred cccceEEeCCCeEEEEeeccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcc
Q 042484 268 DLSNYVVLGNNKRFKLISERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDH 347 (620)
Q Consensus 268 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~ 347 (620)
...
T Consensus 228 ~~~----------------------------------------------------------------------------- 230 (347)
T 2iy9_A 228 ETP----------------------------------------------------------------------------- 230 (347)
T ss_dssp SCC-----------------------------------------------------------------------------
T ss_pred cee-----------------------------------------------------------------------------
Confidence 100
Q ss_pred cCCCccccEEEeecCCcceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcE
Q 042484 348 TTDRHVLPASVITFNDGYYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFN 418 (620)
Q Consensus 348 ~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~ 418 (620)
......+.||++||+ ||||+| +++.|.
T Consensus 231 ------------------------------------------~~~~~~~~fS~~G~~--~~di~APG~~i~s~~~~~~~~ 266 (347)
T 2iy9_A 231 ------------------------------------------VLHGGGITGSRFGNN--WVDIAAPGQNITFLRPDAKTG 266 (347)
T ss_dssp ------------------------------------------CBCCCSSSCBCBCTT--TCSEEEECSSEEEECTTSCEE
T ss_pred ------------------------------------------cccCCCCCCCCCCCC--CCEEEeCCCCeEeecCCCCeE
Confidence 001235689999998 899998 567899
Q ss_pred EeccccchhhhhhhhhhhhcccCCCCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCCC
Q 042484 419 SISGTSMSGPYISGIAGLPKILHPDWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMDP 493 (620)
Q Consensus 419 ~~sGTSMAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~~ 493 (620)
.++|||||||||||++|||+|++|+|++.|||++|++||+++... ....+|+|+||+.+|++.
T Consensus 267 ~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 267 TGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSL------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGG------------TTTSGGGEECCHHHHHHH
T ss_pred eccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCC------------CCccccCCEecHHHHHHH
Confidence 999999999999999999999999999999999999999987432 135899999999999983
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=3.2e-45 Score=397.96 Aligned_cols=258 Identities=23% Similarity=0.277 Sum_probs=201.9
Q ss_pred ccccc-cCCCCCCcEEEEeccccCC------CCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCC
Q 042484 67 NSIWE-KARYGEDIIIGNLDTGVWR------ESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSS 139 (620)
Q Consensus 67 ~~~~~-~~~~G~GV~VgVIDTGId~------~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 139 (620)
+.+|+ .+++|+||+|||||||||+ .||+|.+. ..... ++ . +
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~------------i~~~~------------~~-~-------~ 58 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK------------ITALY------------AL-G-------R 58 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC------------EEEEE------------ET-T-------T
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC------------Eeeec------------cc-c-------C
Confidence 48997 7999999999999999999 79999752 10000 11 0 1
Q ss_pred CCCCCCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCC--CHHHHHHHHHHHHhCCCcEE
Q 042484 140 FYSARDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGC--YDCDIIAAFDMAIHDGVDML 217 (620)
Q Consensus 140 ~~~~~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~--~~~~i~~ai~~a~~~gvdVI 217 (620)
...+.|+.||||||||||+|+. ..+.||||+|+|+++|++... |.. ..+++.++|++|++.|++||
T Consensus 59 ~~~~~d~~gHGT~VAgiiag~g-----------~~~~GvAp~a~l~~~~v~~~~-g~~~~~~~~~~~ai~~a~~~g~~Vi 126 (434)
T 1wmd_A 59 TNNANDTNGHGTHVAGSVLGNG-----------STNKGMAPQANLVFQSIMDSG-GGLGGLPSNLQTLFSQAYSAGARIH 126 (434)
T ss_dssp TTCCCCSSSHHHHHHHHHHCCS-----------SSSCCSSTTSEEEEEECCCTT-SSCTTSCSSHHHHHHHHHHTTCSEE
T ss_pred CCCCCCCCCcHHHHHHHHHcCC-----------CCceeeCCCCEEEEEEeecCC-CccccccHHHHHHHHHHHhcCCeEE
Confidence 1246788999999999999864 236799999999999999776 432 45689999999999999999
Q ss_pred eecH----------HHHHHHHH-HhcCcEEEEecCCCCCCCCccCCC--CCceEEecccccCCcccceEEeCCCeEEEEe
Q 042484 218 SVSL----------VAIGSFHA-VQHGIVVVCSDGNEGLVDVTLQNA--APRQIVVGASTMDRDLSNYVVLGNNKRFKLI 284 (620)
Q Consensus 218 n~Sl----------~~~~~~~a-~~~Gv~vV~AAGN~G~~~~t~~~~--ap~vitVga~~~~~~~~~~~~~g~~~~~~g~ 284 (620)
|||| ...+...+ .++|+++|+||||+|+...++..| ++++|+|||++..+....
T Consensus 127 n~S~G~~~~~~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~~------------- 193 (434)
T 1wmd_A 127 TNSWGAAVNGAYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSFG------------- 193 (434)
T ss_dssp EECCCBCCTTCCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGGC-------------
T ss_pred EecCCCCcCCcCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCcccC-------------
Confidence 9999 23344444 589999999999999765555444 689999999754332000
Q ss_pred eccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCc
Q 042484 285 SERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDG 364 (620)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g 364 (620)
T Consensus 194 -------------------------------------------------------------------------------- 193 (434)
T 1wmd_A 194 -------------------------------------------------------------------------------- 193 (434)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCC---CCCCceeec---------------------CCCcEEe
Q 042484 365 YYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPI---HITPEILKR---------------------RIPFNSI 420 (620)
Q Consensus 365 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~---~~kPdi~a~---------------------~~~y~~~ 420 (620)
......+.++.||++||+ ++||||+|+ .+.|..+
T Consensus 194 ----------------------~~~~~~~~~a~fS~~G~~~~g~~kpdi~ApG~~i~s~~~~~~~~~~~~~~~~~~~~~~ 251 (434)
T 1wmd_A 194 ----------------------SYADNINHVAQFSSRGPTKDGRIKPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYM 251 (434)
T ss_dssp ----------------------GGGSCTTSBCTTSCCCCCTTSCCCCCEEEECSSEEEECCTTCCGGGSSEEEETTEEEE
T ss_pred ----------------------cccCCCCccccccCCCCCCCCCCCceEEcCCCCeEecCCCCCCCcccccCCCCceEee
Confidence 000113567899999997 689999991 4679999
Q ss_pred ccccchhhhhhhhhhhhcccCCCC-----CHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCCCc
Q 042484 421 SGTSMSGPYISGIAGLPKILHPDW-----SPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMDPG 494 (620)
Q Consensus 421 sGTSMAaP~VAG~aALl~~~~P~~-----sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~~~ 494 (620)
+|||||||||||++|||+|++|++ ++++||++|++||+++.. ..+...||+|+||+.+|++..
T Consensus 252 sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~-----------~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 252 GGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL-----------GYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS-----------CSSCTTTTTCBCCHHHHHTCE
T ss_pred cchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC-----------CCCCccCCcCeEeHHHhcccc
Confidence 999999999999999999999875 999999999999987521 345678999999999999754
No 24
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.4e-44 Score=407.66 Aligned_cols=306 Identities=18% Similarity=0.154 Sum_probs=184.9
Q ss_pred CCCccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCC
Q 042484 64 IPPNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSA 143 (620)
Q Consensus 64 ~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 143 (620)
+++..+|..+++|+||+|||||||||++||+|.+.-. .+. . .|..+ .....|
T Consensus 57 in~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~~-------~~~----~--------~~~~~---------~~d~~p 108 (600)
T 2oxa_A 57 LNLWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNVR-------PGS----K--------NVVTG---------SDDPTP 108 (600)
T ss_dssp CCCHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGBC-------SCC----B--------CTTTC---------SSCCCC
T ss_pred cChHHHHhcCCCCCCcEEEEecCCcCCCCcchhhccc-------cCc----e--------eccCC---------CCCCCC
Confidence 4567999999999999999999999999999985310 000 0 01000 112234
Q ss_pred CC-CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCC-HHHHHHHHHHHHhCCCcEEeecH
Q 042484 144 RD-KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCY-DCDIIAAFDMAIHDGVDMLSVSL 221 (620)
Q Consensus 144 ~D-~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~-~~~i~~ai~~a~~~gvdVIn~Sl 221 (620)
.| +.||||||||||||.. + ...+.||||+|+|+.+|+++.. +... ...+++....+..++++||||||
T Consensus 109 ~d~~~gHGT~vAGiiaa~~-n--------~~g~~GVAp~A~l~~vkv~~~~-~~~~~~~~~~~~~~~a~~~~~~Vin~S~ 178 (600)
T 2oxa_A 109 TDPDTGHGTSVSGIIAAVD-N--------AIGTKGIAPRAQLQGFNLLDDN-SQQLQKDWLYALGDSNASRDNRVFNHSY 178 (600)
T ss_dssp CSTTCCHHHHHHHHHHCCS-S--------SSSCCCSSTTCEEEEECTTSTT-CCCCHHHHHHHTTTSHHHHTCSEEEECC
T ss_pred CCCCCCCccHHHHHhhccc-C--------CCcceEEccCCceEEEeeecCc-ccchHHHHHHHHhhhhcccCCeEEEEec
Confidence 44 7899999999999982 2 2457899999999999999877 4332 23444444457788999999999
Q ss_pred ------------HHHHHHH-------HHhcCcEEEEecCCCCCCCC----------------------ccCCCCCceEEe
Q 042484 222 ------------VAIGSFH-------AVQHGIVVVCSDGNEGLVDV----------------------TLQNAAPRQIVV 260 (620)
Q Consensus 222 ------------~~~~~~~-------a~~~Gv~vV~AAGN~G~~~~----------------------t~~~~ap~vitV 260 (620)
+...... +.++|++||+||||+|+... ...+.++|+|+|
T Consensus 179 G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vItV 258 (600)
T 2oxa_A 179 RMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVV 258 (600)
T ss_dssp CCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEEE
T ss_pred cCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeEEE
Confidence 1122222 44789999999999986311 111235679999
Q ss_pred cccccCCcccceEEeCCCeEEEEeeccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecC
Q 042484 261 GASTMDRDLSNYVVLGNNKRFKLISERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNL 340 (620)
Q Consensus 261 ga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~ 340 (620)
||++.+.....+...|....+....
T Consensus 259 gA~~~~g~~a~fS~~G~~vdv~APG------------------------------------------------------- 283 (600)
T 2oxa_A 259 SALNADGVRSSYSSVGSNIFLSATG------------------------------------------------------- 283 (600)
T ss_dssp EEECTTSSBCTTCCBCTTEEEEEEC-------------------------------------------------------
T ss_pred ecccCCCCcCCcCCCCCCeEEEecc-------------------------------------------------------
Confidence 9876544322111111110000000
Q ss_pred CCCCCcccCCCccccEEEeecCCcceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCCC--CCceeecCCCcE
Q 042484 341 PEFGNDHTTDRHVLPASVITFNDGYYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHI--TPEILKRRIPFN 418 (620)
Q Consensus 341 ~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~--kPdi~a~~~~y~ 418 (620)
..+. ...|.+ .+........+. ...+...++.+ ....-...+.|.
T Consensus 284 ----~~i~---~~~p~i--------------------~ttd~~g~~~g~------~~~~~~~~~~~~~~~~~~~~~~~y~ 330 (600)
T 2oxa_A 284 ----GEYG---TDTPAM--------------------VTTDLPGCDMGY------NRTDDPSTNRLHGNSQLDASCDYNG 330 (600)
T ss_dssp ----CSCS---SSSCCE--------------------EEECCSSTTSSS------SSTTSCCSSTTTTCTTTCTTCCEEE
T ss_pred ----CCCC---cCCCce--------------------Eecccccccccc------ccccccccccccccccccCCccccc
Confidence 0000 000000 000000000000 00000000000 000000123489
Q ss_pred EeccccchhhhhhhhhhhhcccCCCCCHHHHHHHHHcccccCCCCcceec-----------------c---CCCCCCCCc
Q 042484 419 SISGTSMSGPYISGIAGLPKILHPDWSPAAVQSAIMTTATTQDNKKQQIL-----------------D---ASFTEATPF 478 (620)
Q Consensus 419 ~~sGTSMAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~-----------------~---~~~~~~~~~ 478 (620)
.++|||||||||||++|||+|++|+|+|++||++|++||++++....++. + ........+
T Consensus 331 ~~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~ 410 (600)
T 2oxa_A 331 VMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSP 410 (600)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBT
T ss_pred ccccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccc
Confidence 99999999999999999999999999999999999999999875542211 0 111222457
Q ss_pred eecccccCccccCCCce
Q 042484 479 SYGAGHVQPNLAMDPGL 495 (620)
Q Consensus 479 ~~GaG~vn~~~A~~~~l 495 (620)
.||+|+||+.+|++...
T Consensus 411 ~~G~G~vda~~Av~~A~ 427 (600)
T 2oxa_A 411 TYGFGLIDVNKALELAA 427 (600)
T ss_dssp TTBTCBCCHHHHHHHHT
T ss_pred cCCCchhhHHHHHHHHH
Confidence 89999999999998443
No 25
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.2e-44 Score=396.87 Aligned_cols=269 Identities=17% Similarity=0.220 Sum_probs=190.6
Q ss_pred CCCccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCC
Q 042484 64 IPPNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSA 143 (620)
Q Consensus 64 ~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 143 (620)
+++..+|+.+++|+||+|||||||||++||+|.+.- .... ..++ ......+.+...+
T Consensus 25 i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~------------~~~~----------~~d~-~~~~~~p~~~~~~ 81 (471)
T 1p8j_A 25 LNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNY------------DPGA----------SFDV-NDQDPDPQPRYTQ 81 (471)
T ss_dssp CCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGB------------CGGG----------CEET-TTTBSCCCCCCCT
T ss_pred CChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhcc------------CccC----------cccc-cCCCCCCCCccCC
Confidence 456799999999999999999999999999998530 0000 0011 0000011112245
Q ss_pred CCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHh-CCCcEEeecH-
Q 042484 144 RDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIH-DGVDMLSVSL- 221 (620)
Q Consensus 144 ~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~-~gvdVIn~Sl- 221 (620)
.|..||||||||||||...+ ...+.||||+|+|+.+|++. +..+++++|++++++ ++++||||||
T Consensus 82 ~d~~gHGT~vAGiiaa~~~n--------~~g~~GvAp~a~i~~~rv~~-----g~~~~~~~ai~~a~~~~~~~Vin~S~G 148 (471)
T 1p8j_A 82 MNDNRHGTRCAGEVAAVANN--------GVCGVGVAYNARIGGVRMLD-----GEVTDAVEARSLGLNPNHIHIYSASWG 148 (471)
T ss_dssp TCTTCHHHHHHHHHHCCSSS--------SSSCCCTTTTSEEEEEECSS-----SCCCHHHHHHHHTSCTTTCCEEEECCB
T ss_pred CCCCCcHHHHHHHHHeeccC--------CCCCEEECCCCeEEEEEccC-----CchhHHHHHHHhhhccCCCeEEEeccC
Confidence 68899999999999987533 23478999999999999985 235679999999999 9999999999
Q ss_pred --------------HHHHHHHHHh-----cCcEEEEecCCCCCCCCc----cCCCCCceEEecccccCCcccceEEeCCC
Q 042484 222 --------------VAIGSFHAVQ-----HGIVVVCSDGNEGLVDVT----LQNAAPRQIVVGASTMDRDLSNYVVLGNN 278 (620)
Q Consensus 222 --------------~~~~~~~a~~-----~Gv~vV~AAGN~G~~~~t----~~~~ap~vitVga~~~~~~~~~~~~~g~~ 278 (620)
...+..++.+ +|+++|+||||+|..... ....++++|+|||++.+..
T Consensus 149 ~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~g~---------- 218 (471)
T 1p8j_A 149 PEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGN---------- 218 (471)
T ss_dssp SCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTTSC----------
T ss_pred cCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCCCC----------
Confidence 2334444443 699999999999964321 1223589999999764332
Q ss_pred eEEEEeeccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEE
Q 042484 279 KRFKLISERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASV 358 (620)
Q Consensus 279 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~ 358 (620)
T Consensus 219 -------------------------------------------------------------------------------- 218 (471)
T 1p8j_A 219 -------------------------------------------------------------------------------- 218 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCcceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCCC----------CCceee---cCCCcEEeccccc
Q 042484 359 ITFNDGYYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHI----------TPEILK---RRIPFNSISGTSM 425 (620)
Q Consensus 359 i~~~~g~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~----------kPdi~a---~~~~y~~~sGTSM 425 (620)
++.||++||... .++|+. .++.|..++||||
T Consensus 219 ------------------------------------~a~~S~~g~~~~~~~~~~~~~~g~~i~st~~~~~~~~~~sGTS~ 262 (471)
T 1p8j_A 219 ------------------------------------VPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSA 262 (471)
T ss_dssp ------------------------------------CCTTCCBCTTCCEEEECCCSTTSCCEEEEETTTEEEEEECSHHH
T ss_pred ------------------------------------cccccCCCCcceEEeCCCCCCCCCCEEEeeCCCCccccCCCccc
Confidence 122333333210 122333 2356899999999
Q ss_pred hhhhhhhhhhhhcccCCCCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCCCc
Q 042484 426 SGPYISGIAGLPKILHPDWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMDPG 494 (620)
Q Consensus 426 AaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~~~ 494 (620)
|||||||++|||+|++|+|++++||++|++||++++..................||+|+||+.+|++..
T Consensus 263 AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g~~~~~~~G~G~vda~~Av~~a 331 (471)
T 1p8j_A 263 SAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALA 331 (471)
T ss_dssp HHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTSCEEBTTTBTCBCCHHHHHHHH
T ss_pred ccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCCcccCCCCCCEEEcHhHHHHHh
Confidence 999999999999999999999999999999999876432221111111224568999999999999843
No 26
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.1e-43 Score=363.63 Aligned_cols=221 Identities=22% Similarity=0.333 Sum_probs=181.1
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARD 145 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D 145 (620)
...+|..+++|+||+|||||||||++||+|.+. ...+. ++ . ....++.|
T Consensus 18 ~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~------------~~~~~------------~~-~------~~~~~~~d 66 (284)
T 1sh7_A 18 LDRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR------------SVSGY------------DF-V------DNDADSSD 66 (284)
T ss_dssp CCSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC------------EEEEE------------ET-T------TTBSCCCC
T ss_pred chhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC------------ccccc------------cc-c------CCCCCCCC
Confidence 357999999999999999999999999999853 10000 11 0 11234678
Q ss_pred CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHh--CCCcEEeecH--
Q 042484 146 KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIH--DGVDMLSVSL-- 221 (620)
Q Consensus 146 ~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~--~gvdVIn~Sl-- 221 (620)
..||||||||||+|.. .||||+|+|+.+|++.+. |.+..+++++||+|+++ .+++||||||
T Consensus 67 ~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~-g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~ 131 (284)
T 1sh7_A 67 CNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCS-GSGTTSGVISGVDWVAQNASGPSVANMSLGG 131 (284)
T ss_dssp SSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTT-SCBCHHHHHHHHHHHHHHCCSSEEEEECCCB
T ss_pred CCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCC-CCcCHHHHHHHHHHHHhCCCCCcEEEeCCCC
Confidence 8999999999999762 599999999999999887 67889999999999997 4799999999
Q ss_pred -----HHHHHHHHHhcCcEEEEecCCCCCCCC-ccCCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCCCc
Q 042484 222 -----VAIGSFHAVQHGIVVVCSDGNEGLVDV-TLQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPSDK 295 (620)
Q Consensus 222 -----~~~~~~~a~~~Gv~vV~AAGN~G~~~~-t~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 295 (620)
+..++.++.++|+++|+||||+|.... ..+...+++|+||+++.+
T Consensus 132 ~~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------------- 182 (284)
T 1sh7_A 132 GQSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS----------------------------- 182 (284)
T ss_dssp SCCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT-----------------------------
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC-----------------------------
Confidence 677777888999999999999996542 234456899999995421
Q ss_pred eeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccCCC
Q 042484 296 LFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFTRH 375 (620)
Q Consensus 296 ~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~ 375 (620)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcEEeccccchhhhhhhhhhhhcccCCCCCH
Q 042484 376 PVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFNSISGTSMSGPYISGIAGLPKILHPDWSP 446 (620)
Q Consensus 376 ~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~sp 446 (620)
+.++.||++|| +|||+| ..+.|..++|||||||||||++|||+|++|++++
T Consensus 183 -----------------~~~~~~S~~G~---~~di~ApG~~i~s~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~ 242 (284)
T 1sh7_A 183 -----------------DSRSSFSNWGS---CVDLFAPGSQIKSAWYDGGYKTISGTSMATPHVAGVAALYLQENNGLTP 242 (284)
T ss_dssp -----------------SBBCTTCCBST---TCCEEEECSSEEEECTTSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCH
T ss_pred -----------------CCcCcccCCCC---ccEEEeccCCeEEecCCCCEEEccChHHHHHHHHHHHHHHHHHCCCCCH
Confidence 23456888887 467766 4568999999999999999999999999999999
Q ss_pred HHHHHHHHcccccCC
Q 042484 447 AAVQSAIMTTATTQD 461 (620)
Q Consensus 447 ~~ik~~L~~TA~~~~ 461 (620)
+|||++|++||++..
T Consensus 243 ~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 243 LQLTGLLNSRASENK 257 (284)
T ss_dssp HHHHHHHHHHSEESC
T ss_pred HHHHHHHHhhCccCC
Confidence 999999999998753
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=1.6e-43 Score=361.80 Aligned_cols=220 Identities=28% Similarity=0.398 Sum_probs=179.2
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARD 145 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D 145 (620)
...+|..+++|+||+|||||||||++||+|.+. ...+. ++ . ....++.|
T Consensus 20 ~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~------------~~~~~------------d~-~------~~~~~~~d 68 (278)
T 2b6n_A 20 LDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR------------ASSGY------------DF-I------DNDYDATD 68 (278)
T ss_dssp CCSEEECSCCCTTCEEEEEESCCCTTCGGGTTC------------EEEEE------------ET-T------TTBSCCCC
T ss_pred cchhcccCCCCCCCEEEEEeCCCCCCChhHhcc------------cccCe------------ec-C------CCCCCCCC
Confidence 357899999999999999999999999999753 11000 01 0 11234578
Q ss_pred CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHh--CCCcEEeecH--
Q 042484 146 KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIH--DGVDMLSVSL-- 221 (620)
Q Consensus 146 ~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~--~gvdVIn~Sl-- 221 (620)
+.||||||||||+|. ..||||+|+|+.+|++.+. |.+..++++++|+|+++ .+++||||||
T Consensus 69 ~~gHGT~vAgiia~~--------------~~GvAp~a~i~~~~v~~~~-g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~ 133 (278)
T 2b6n_A 69 CNGHGTHVAGTIGGS--------------TYGVAKNVNVVGVRVLNCS-GSGSNSGVIAGINWVKNNASGPAVANMSLGG 133 (278)
T ss_dssp SSSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTT-SCCCHHHHHHHHHHHHHHCCSSEEEEECCCE
T ss_pred CCCcHHHHHHHHHCC--------------CcCCCCCCeEEEEEEECCC-CCccHHHHHHHHHHHHhCCCCCeEEEECCCC
Confidence 899999999999975 2599999999999999887 67889999999999997 6999999999
Q ss_pred -----HHHHHHHHHhcCcEEEEecCCCCCCCCc-cCCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCCCc
Q 042484 222 -----VAIGSFHAVQHGIVVVCSDGNEGLVDVT-LQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPSDK 295 (620)
Q Consensus 222 -----~~~~~~~a~~~Gv~vV~AAGN~G~~~~t-~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 295 (620)
+..+..++.++|+++|+||||+|..... .+...+++|+|||++.+
T Consensus 134 ~~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------------- 184 (278)
T 2b6n_A 134 GASQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN----------------------------- 184 (278)
T ss_dssp ECCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-----------------------------
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC-----------------------------
Confidence 6677778889999999999999965432 34456899999995422
Q ss_pred eeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccCCC
Q 042484 296 LFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFTRH 375 (620)
Q Consensus 296 ~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~ 375 (620)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee-----------cCCCcEEeccccchhhhhhhhhhhhcccCCCC
Q 042484 376 PVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK-----------RRIPFNSISGTSMSGPYISGIAGLPKILHPDW 444 (620)
Q Consensus 376 ~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a-----------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~ 444 (620)
+.++.||++|| +|||+| ..+.|..++|||||||||||++|||+|++|++
T Consensus 185 -----------------~~~~~~S~~G~---~~di~ApG~~i~s~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~l 244 (278)
T 2b6n_A 185 -----------------DSRSSFSNYGT---CLDIYAPGSSITSSWYTSNSATNTISGTSMASPHVAGVAALYLDENPNL 244 (278)
T ss_dssp -----------------SBBCTTCCBST---TCCEEEECSSEEEECTTSTTCEEEECSHHHHHHHHHHHHHHHHHHCTTC
T ss_pred -----------------CCcCCcCCCCC---CCeEEeCCCCeECcccCCCCCEEEeCcHHHHHHHHHHHHHHHHHhCCCC
Confidence 12345777776 556666 23678999999999999999999999999999
Q ss_pred CHHHHHHHHHcccccC
Q 042484 445 SPAAVQSAIMTTATTQ 460 (620)
Q Consensus 445 sp~~ik~~L~~TA~~~ 460 (620)
+++|||++|++||++.
T Consensus 245 t~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 245 SPAQVTNLLKTRATAD 260 (278)
T ss_dssp CHHHHHHHHHHHSEES
T ss_pred CHHHHHHHHHHhCccC
Confidence 9999999999999874
No 28
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=9.1e-44 Score=415.15 Aligned_cols=313 Identities=20% Similarity=0.223 Sum_probs=221.7
Q ss_pred CCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCC-CCCHHHHHHHHHHHHh-----CCCcEE
Q 042484 144 RDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMG-GCYDCDIIAAFDMAIH-----DGVDML 217 (620)
Q Consensus 144 ~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~~i~~ai~~a~~-----~gvdVI 217 (620)
.|+.||||||||||||.. + +..+.||||+|+|+.+|++....+ .+..+.++++|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N--------~~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-S--------SRDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-S--------SSSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-C--------CCCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478999999999999986 2 355889999999999999976522 2356778888888887 799999
Q ss_pred eecH-----------HHHHHHHHH-hcCcEEEEecCCCCCCCCccCCC----CCceEEecccccCCcccceEEeCCCeEE
Q 042484 218 SVSL-----------VAIGSFHAV-QHGIVVVCSDGNEGLVDVTLQNA----APRQIVVGASTMDRDLSNYVVLGNNKRF 281 (620)
Q Consensus 218 n~Sl-----------~~~~~~~a~-~~Gv~vV~AAGN~G~~~~t~~~~----ap~vitVga~~~~~~~~~~~~~g~~~~~ 281 (620)
|||| +..++.++. ++|++||+||||+|+...++..| ++++|+|||++.+........
T Consensus 338 NmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys------- 410 (1354)
T 3lxu_X 338 NMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYA------- 410 (1354)
T ss_dssp EECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC----------
T ss_pred EcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCcccccc-------
Confidence 9999 455666665 89999999999999876665443 589999999754332100000
Q ss_pred EEeeccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeec
Q 042484 282 KLISERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITF 361 (620)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~ 361 (620)
T Consensus 411 -------------------------------------------------------------------------------- 410 (1354)
T 3lxu_X 411 -------------------------------------------------------------------------------- 410 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCC---CCCCceee-----------cCCCcEEeccccchh
Q 042484 362 NDGYYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPI---HITPEILK-----------RRIPFNSISGTSMSG 427 (620)
Q Consensus 362 ~~g~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~---~~kPdi~a-----------~~~~y~~~sGTSMAa 427 (620)
......+.++.||||||+ ..||||+| ..+.|..++||||||
T Consensus 411 -------------------------~~~~~~g~~asFSS~GPt~dg~~KpDIaAPG~~I~St~~~~~~~y~~~SGTSmAA 465 (1354)
T 3lxu_X 411 -------------------------MREKLPGNVYTWTSRDPCIDGGQGVTVCAPGGAIASVPQFTMSKSQLMNGTSMAA 465 (1354)
T ss_dssp --------------------------------CCCCCCCCSCCSSSSCCEEEEEEC---------------CCCCGGGCH
T ss_pred -------------------------cccCCCCccccccCCCCCccCCCcceEEecCceEEEeecCCCCceecCCCCCHHH
Confidence 000112467899999997 68999999 246789999999999
Q ss_pred hhhhhhhhhhcc----cCCCCCHHHHHHHHHcccccCCCCcceeccCCCCCCCCceecccccCccccCCCceeeecCchh
Q 042484 428 PYISGIAGLPKI----LHPDWSPAAVQSAIMTTATTQDNKKQQILDASFTEATPFSYGAGHVQPNLAMDPGLVYYLTVND 503 (620)
Q Consensus 428 P~VAG~aALl~~----~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~~~lv~~~~~~d 503 (620)
|||||++|||++ .+|+|++++||++|++||+++.. .+++.||+|+||+.+|++..+.++..+.+
T Consensus 466 P~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~------------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~ 533 (1354)
T 3lxu_X 466 PHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY------------VDPFAQGHGLLNVEKAFEHLTEHRQSKDN 533 (1354)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT------------SCTTTSSSSBCCHHHHHHHHHTTTTCGGG
T ss_pred HHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC------------CCcccccCCEeCHHHHHHHHHhcCCCCcc
Confidence 999999999986 89999999999999999998642 34678999999999999999999999999
Q ss_pred hHHhhhhcCCCcc-eeeeccCCccccCCCCCccccccCCCeEEeeccCceEEEEEEE----EE---cCC----CceEEEE
Q 042484 504 YLNFLCALGYNKN-VISLFSTNCTYTCPKNAIILVNFNYPSITVPKLSGSITVTRRV----KN---VGS----PGTYQAR 571 (620)
Q Consensus 504 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ln~psi~~~~~~~~~~~~rtv----~n---~~~----~~ty~~~ 571 (620)
++.|.|..++... .+- |-.+ ......+++++| .| ..+ ...-++.
T Consensus 534 ~v~f~~~v~~~~~rgIy-------------------lR~~-----~~~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~ 589 (1354)
T 3lxu_X 534 MLRFSVRVGNNADKGIH-------------------LRQG-----VQRNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLN 589 (1354)
T ss_dssp GEEEEEEETTTTBSSEE-------------------ECSS-----CCCSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEE
T ss_pred ceEEEEEecCCCCCceE-------------------Eecc-----ccCCceEEEEEEeeeecCcccCChhhccceEEEEE
Confidence 9999998874322 110 1111 001223333333 11 111 2222333
Q ss_pred EeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEccccCCCCeEEEEEE
Q 042484 572 VKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAKNASVTKDYVFGELI 619 (620)
Q Consensus 572 ~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~~~~~~~~~~~g~~~ 619 (620)
+.... .+-.-|+.|.+ .++.++|.|++++.. ...+..|+++.
T Consensus 590 L~~t~--~wv~~p~~l~l--~~~~r~~~v~vDp~~--L~~G~h~~~v~ 631 (1354)
T 3lxu_X 590 LIASQ--PWVQCGAFLDL--SYGTRSIAVRVDPTG--LQPGVHSAVIR 631 (1354)
T ss_dssp EEESS--TTEEECSCEEC--TTSCEEEEEEECGGG--CCSEEEEEEEE
T ss_pred EecCC--Cceecccceee--cCCCceEEEEECCCC--CCCcceeEEEE
Confidence 33222 12223888777 788899999999876 56677887763
No 29
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=3.9e-43 Score=358.98 Aligned_cols=220 Identities=23% Similarity=0.327 Sum_probs=180.2
Q ss_pred CccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCC
Q 042484 66 PNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARD 145 (620)
Q Consensus 66 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D 145 (620)
...+|..+.+|+||+|||||||||++||+|.+. .+. ++.. ....+.|
T Consensus 20 ~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~-------~~~-------------------~~~~-------~~~~~~d 66 (276)
T 4dzt_A 20 LSNSYTYTATGRGVNVYVIDTGIRTTHREFGGR-------ARV-------------------GYDA-------LGGNGQD 66 (276)
T ss_dssp CCSCEECSCCCTTCEEEEEESCCCTTCGGGTTC-------EEE-------------------EEET-------TSSCSCC
T ss_pred cccceecCCCCCCcEEEEEccCCCCCChhHccC-------eec-------------------cccC-------CCCCCCC
Confidence 458899999999999999999999999999753 001 1100 0134567
Q ss_pred CCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhC--CCcEEeecH--
Q 042484 146 KNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHD--GVDMLSVSL-- 221 (620)
Q Consensus 146 ~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~--gvdVIn~Sl-- 221 (620)
..||||||||||+|.. .||||+|+|+.+|++.+. +.+..+.++++++|+++. +++||||||
T Consensus 67 ~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~-~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~ 131 (276)
T 4dzt_A 67 CNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCN-GSGSTSGVIAGVDWVTRNHRRPAVANMSLGG 131 (276)
T ss_dssp SSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT-SCCCHHHHHHHHHHHHHHCCSSEEEEECCCE
T ss_pred CCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCC-CCcCHHHHHHHHHHHHhcCCCCeEEEECCCC
Confidence 8899999999999762 599999999999999887 778999999999999987 999999999
Q ss_pred -----HHHHHHHHHhcCcEEEEecCCCCCCCCcc-CCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCCCc
Q 042484 222 -----VAIGSFHAVQHGIVVVCSDGNEGLVDVTL-QNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPSDK 295 (620)
Q Consensus 222 -----~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~-~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 295 (620)
+..+...+.++|+++|+||||+|...... +...+.+|+|||++.+
T Consensus 132 ~~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------------- 182 (276)
T 4dzt_A 132 GVSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS----------------------------- 182 (276)
T ss_dssp ECCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-----------------------------
T ss_pred CCCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC-----------------------------
Confidence 67778888899999999999999654333 4456899999995422
Q ss_pred eeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccCCC
Q 042484 296 LFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFTRH 375 (620)
Q Consensus 296 ~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~ 375 (620)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee-----------cCCCcEEeccccchhhhhhhhhhhhcccCCCC
Q 042484 376 PVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK-----------RRIPFNSISGTSMSGPYISGIAGLPKILHPDW 444 (620)
Q Consensus 376 ~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a-----------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~ 444 (620)
+.++.||++||. +||.| ....|..++|||||||||||++|||+|++|++
T Consensus 183 -----------------~~~~~~S~~g~~---~dv~ApG~~i~s~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~l 242 (276)
T 4dzt_A 183 -----------------DARASFSNYGSC---VDLFAPGASIPSAWYTSDTATQTLNGTSMATPHVAGVAALYLEQNPSA 242 (276)
T ss_dssp -----------------SBBCTTCCBSTT---CCEEEECSSEEEECTTSSSCEEEECSHHHHHHHHHHHHHHHHHHCTTC
T ss_pred -----------------CCcCCcCCCCCC---ceEEeCCCCeEccccCCCCceEEeeEHHHHHHHHHHHHHHHHHHCCCC
Confidence 224457777763 45555 23478999999999999999999999999999
Q ss_pred CHHHHHHHHHcccccCCC
Q 042484 445 SPAAVQSAIMTTATTQDN 462 (620)
Q Consensus 445 sp~~ik~~L~~TA~~~~~ 462 (620)
+++|||++|++||++...
T Consensus 243 t~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 243 TPASVASAILNGATTGRL 260 (276)
T ss_dssp CHHHHHHHHHHHSEESCC
T ss_pred CHHHHHHHHHhhCcCCcc
Confidence 999999999999998643
No 30
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=2e-43 Score=389.80 Aligned_cols=266 Identities=17% Similarity=0.169 Sum_probs=189.9
Q ss_pred CCCccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccc-cccCCCCCCCCCC
Q 042484 64 IPPNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDY-AVHKGPLNSSFYS 142 (620)
Q Consensus 64 ~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~-~~~~~~~~~~~~~ 142 (620)
+++..+|+.+++|+||+|||||||||++||+|.+.- +. ..+| .. .. .....+
T Consensus 41 i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~~-----------------~~~~d~~-~~--~~~~~p 93 (503)
T 2id4_A 41 INVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------CA-----------------EGSWDFN-DN--TNLPKP 93 (503)
T ss_dssp CCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------CG-----------------GGCEETT-TT--BSCCCC
T ss_pred cChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------cc-----------------cCcccCC-CC--CCCCCC
Confidence 456799999999999999999999999999998631 00 0011 00 00 011122
Q ss_pred CCCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcEEeecH-
Q 042484 143 ARDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDGVDMLSVSL- 221 (620)
Q Consensus 143 ~~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~gvdVIn~Sl- 221 (620)
..|..||||||||||||...+ +..+.||||+|+|+.+|++... ++..++++||++|++.+ +||||||
T Consensus 94 ~~d~~gHGT~vAGiiaa~~~n--------~~~~~GvAp~a~i~~~rv~~~~---~~~~~~~~ai~~a~~~~-~Iin~S~G 161 (503)
T 2id4_A 94 RLSDDYHGTRCAGEIAAKKGN--------NFCGVGVGYNAKISGIRILSGD---ITTEDEAASLIYGLDVN-DIYSCSWG 161 (503)
T ss_dssp CSTTTTHHHHHHHHHHCCSSS--------SSSCCCTTTTSEEEEEECTTSC---CCHHHHHHHTTTTTTTC-SEEEECEE
T ss_pred CCCCCChHHHHHHHHHhccCC--------CCCcEEECCCCEEEEEEeeCCC---CChHHHHHHHHhHhhcC-CEEEeCCC
Confidence 357889999999999987633 2346899999999999999743 78899999999999988 9999999
Q ss_pred --------------HHHHHHHHH-----hcCcEEEEecCCCCCCCC--ccCC--CCCceEEecccccCCcccceEEeCCC
Q 042484 222 --------------VAIGSFHAV-----QHGIVVVCSDGNEGLVDV--TLQN--AAPRQIVVGASTMDRDLSNYVVLGNN 278 (620)
Q Consensus 222 --------------~~~~~~~a~-----~~Gv~vV~AAGN~G~~~~--t~~~--~ap~vitVga~~~~~~~~~~~~~g~~ 278 (620)
+..+..++. .+|+++|+||||+|.... .... .++++|+|||++.+...
T Consensus 162 ~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~~~~--------- 232 (503)
T 2id4_A 162 PADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLH--------- 232 (503)
T ss_dssp SCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTTSCC---------
T ss_pred cCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCCCCc---------
Confidence 334444554 479999999999996432 2222 35789999997644321
Q ss_pred eEEEEeeccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEE
Q 042484 279 KRFKLISERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASV 358 (620)
Q Consensus 279 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~ 358 (620)
T Consensus 233 -------------------------------------------------------------------------------- 232 (503)
T 2id4_A 233 -------------------------------------------------------------------------------- 232 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCcceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCC--------CCCceee---cCCCcEEeccccchh
Q 042484 359 ITFNDGYYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIH--------ITPEILK---RRIPFNSISGTSMSG 427 (620)
Q Consensus 359 i~~~~g~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~--------~kPdi~a---~~~~y~~~sGTSMAa 427 (620)
+.||++||.. ...+|.. .++.|..++||||||
T Consensus 233 -------------------------------------a~~S~~g~~~~~~a~~~gpG~~I~st~~~~~~~~~~sGTS~Aa 275 (503)
T 2id4_A 233 -------------------------------------PPYSEGCSAVMAVTYSSGSGEYIHSSDINGRCSNSHGGTSAAA 275 (503)
T ss_dssp -------------------------------------CTTCCCCTTEEEEEECSBTTBCEEEECSTTCEEEEECSHHHHH
T ss_pred -------------------------------------CCcCCCCCcceEeecCCCCCCceEeecCCCCceecCCCccccc
Confidence 1122222210 0001111 246789999999999
Q ss_pred hhhhhhhhhhcccCCCCCHHHHHHHHHcccccCCCC-cceeccCCCCCCCCceecccccCccccCCCc
Q 042484 428 PYISGIAGLPKILHPDWSPAAVQSAIMTTATTQDNK-KQQILDASFTEATPFSYGAGHVQPNLAMDPG 494 (620)
Q Consensus 428 P~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~-~~~~~~~~~~~~~~~~~GaG~vn~~~A~~~~ 494 (620)
|||||++|||+|++|+|+++|||++|+.||++++.. ................||+|+||+.+|++..
T Consensus 276 P~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g~~~~~~~G~G~vda~~Av~~a 343 (503)
T 2id4_A 276 PLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMS 343 (503)
T ss_dssp HHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSEEBTTTBTCBCCHHHHHHHH
T ss_pred hhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCCCccCcccCCcEecHHHHHHHH
Confidence 999999999999999999999999999999987653 1111111111223457999999999999843
No 31
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=3.8e-43 Score=358.78 Aligned_cols=212 Identities=27% Similarity=0.339 Sum_probs=175.2
Q ss_pred ccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCCCCC
Q 042484 69 IWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARDKNG 148 (620)
Q Consensus 69 ~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D~~g 148 (620)
.|+. .+|+||+|+|||||||++||+|.+. .. .++.. ..++.|..|
T Consensus 24 ~~~~-~~G~gv~VaViDsGvd~~H~~l~~~------------~~--------------~~~~~--------~~~~~d~~g 68 (279)
T 2pwa_A 24 YYDE-SAGQGSCVYVIDTGIEASHPEFEGR------------AQ--------------MVKTY--------YYSSRDGNG 68 (279)
T ss_dssp ECCT-TTTTTEEEEEEESCCCTTCGGGTTC------------EE--------------EEEES--------SSCSSCSSS
T ss_pred cccC-CCCCCCEEEEEeCCCCCCChhHhCc------------cc--------------cccCC--------CCCCCCCCC
Confidence 5553 7899999999999999999999753 11 01100 023567899
Q ss_pred ChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCC-------cEEeecH
Q 042484 149 HGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDGV-------DMLSVSL 221 (620)
Q Consensus 149 HGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~gv-------dVIn~Sl 221 (620)
|||||||||+|+ ..||||+|+|+.+|++.+. |.+..++++++|+|++++++ +||||||
T Consensus 69 HGT~vAgiia~~--------------~~GvAp~a~i~~~~v~~~~-g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~ 133 (279)
T 2pwa_A 69 HGTHCAGTVGSR--------------TYGVAKKTQLFGVKVLDDN-GSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSL 133 (279)
T ss_dssp HHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTT-SCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECC
T ss_pred CHHHHHHHHHhc--------------ccccCCCCEEEEEEeEcCC-CCcCHHHHHHHHHHHHhcCccccCCCccEEEecC
Confidence 999999999975 3599999999999999887 67889999999999999888 9999999
Q ss_pred -------HHHHHHHHHhcCcEEEEecCCCCCCCCc-cCCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCC
Q 042484 222 -------VAIGSFHAVQHGIVVVCSDGNEGLVDVT-LQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPS 293 (620)
Q Consensus 222 -------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t-~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 293 (620)
+..++.++.++|+++|+||||+|..... .+...+++|+|||++.+
T Consensus 134 G~~~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------------------------- 186 (279)
T 2pwa_A 134 GGGYSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY--------------------------- 186 (279)
T ss_dssp CEECCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---------------------------
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC---------------------------
Confidence 6777778889999999999999965432 34456899999995422
Q ss_pred CceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccC
Q 042484 294 DKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFT 373 (620)
Q Consensus 294 ~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 373 (620)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcEEeccccchhhhhhhhhhhhcccCCCC
Q 042484 374 RHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFNSISGTSMSGPYISGIAGLPKILHPDW 444 (620)
Q Consensus 374 ~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P~~ 444 (620)
+.++.||++|| +|||.| ..+.|..++|||||||||||++|||+|+ |++
T Consensus 187 -------------------~~~~~~S~~G~---~~di~APG~~i~s~~~~~~~~~~sGTS~AaP~VaG~aAll~~~-p~l 243 (279)
T 2pwa_A 187 -------------------DRRSSFSNYGS---VLDIFGPGTDILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL-GKT 243 (279)
T ss_dssp -------------------SBBCTTCCBST---TCCEEEECSSEEEEETTTEEEEECSHHHHHHHHHHHHHHHHHT-TSC
T ss_pred -------------------CCcCCcCCCCC---cceEEEecCCeEEeecCCCEEEcCChHHHHHHHHHHHHHHHhC-CCC
Confidence 23457888888 467777 4567899999999999999999999999 999
Q ss_pred CHHHHHHHHHcccccC
Q 042484 445 SPAAVQSAIMTTATTQ 460 (620)
Q Consensus 445 sp~~ik~~L~~TA~~~ 460 (620)
+|+|||++|++||++.
T Consensus 244 t~~~v~~~L~~tA~~~ 259 (279)
T 2pwa_A 244 TAASACRYIADTANKG 259 (279)
T ss_dssp CTTTHHHHHHHHSEES
T ss_pred CHHHHHHHHHHhCccc
Confidence 9999999999999875
No 32
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.2e-42 Score=378.30 Aligned_cols=261 Identities=15% Similarity=0.146 Sum_probs=183.7
Q ss_pred cccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCCCC
Q 042484 68 SIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARDKN 147 (620)
Q Consensus 68 ~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D~~ 147 (620)
..|..+++|+||+|+|||||||++||+|.+.- .+.+... +.+. ++ ......+.|..
T Consensus 17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~------~~~~~~~------------v~~~----dg--~~f~~~~~D~~ 72 (546)
T 2qtw_B 17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV------MVTDFEN------------VPEE----DG--TRFHRQASKCD 72 (546)
T ss_dssp -------CCTTSEEEEEESCCCTTSTTTTTTE------EEEEEEC------------CCCC----C---------CTTTT
T ss_pred hhcccCCCCCCcEEEEECCCCCCCChHHcccc------cccCccc------------ccCC----CC--ccccCCCCCCC
Confidence 47888999999999999999999999998530 0000000 0000 00 00013456889
Q ss_pred CChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhC------CCcEEeecH
Q 042484 148 GHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHD------GVDMLSVSL 221 (620)
Q Consensus 148 gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~------gvdVIn~Sl 221 (620)
||||||||||+|+. .||||+|+|+.+|+++++ |.++.+++++||+|+++. +++||||||
T Consensus 73 GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~-G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSl 137 (546)
T 2qtw_B 73 SHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQ-GKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPL 137 (546)
T ss_dssp HHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT-SEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECE
T ss_pred ChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCC-CCcCHHHHHHHHHHHHHhhhhccCCCeEEEecC
Confidence 99999999999763 599999999999999887 678899999999999974 999999999
Q ss_pred -------HHHHHHHHHhcCcEEEEecCCCCCCCCc-cCCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCCCC
Q 042484 222 -------VAIGSFHAVQHGIVVVCSDGNEGLVDVT-LQNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGLPS 293 (620)
Q Consensus 222 -------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t-~~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 293 (620)
+..++.++.++|++||+||||+|.+... .+...+++|+|||++.+....
T Consensus 138 Gg~~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~a----------------------- 194 (546)
T 2qtw_B 138 AGGYSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQPV----------------------- 194 (546)
T ss_dssp EEECCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCBC-----------------------
T ss_pred CCCCcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCcc-----------------------
Confidence 6777788889999999999999965422 244569999999965332100
Q ss_pred CceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecccC
Q 042484 294 DKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFTFT 373 (620)
Q Consensus 294 ~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 373 (620)
T Consensus 195 -------------------------------------------------------------------------------- 194 (546)
T 2qtw_B 195 -------------------------------------------------------------------------------- 194 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee-----------cCCCcEEeccccchhhhhhhhhhhhcccCC
Q 042484 374 RHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK-----------RRIPFNSISGTSMSGPYISGIAGLPKILHP 442 (620)
Q Consensus 374 ~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a-----------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P 442 (620)
..-..||++|| +|||+| ....|..++|||||||||||++|||+|++|
T Consensus 195 -------------------~~s~~fSn~G~---~vDI~APG~~I~St~~~~~~~y~~~SGTSmAAP~VAG~aALlls~~P 252 (546)
T 2qtw_B 195 -------------------TLGTLGTNFGR---CVDLFAPGEDIIGASSDCSTCFVSQSGTSQAAAHVAGIAAMMLSAEP 252 (546)
T ss_dssp -------------------EETTEECCBST---TCCEEEECSSEEEECTTSTTCEEEECSHHHHHHHHHHHHHHHHHHST
T ss_pred -------------------cccCCcCCCCC---cceEEecCccEEeeccCCCCcEeeeCcCcHHHHHHHHHHHHHHHHCC
Confidence 00012677776 677777 125689999999999999999999999999
Q ss_pred CCCHHHHHHHHHcccccCCCCcceec------cCC---CCCCCCceecccc--cCccccCC
Q 042484 443 DWSPAAVQSAIMTTATTQDNKKQQIL------DAS---FTEATPFSYGAGH--VQPNLAMD 492 (620)
Q Consensus 443 ~~sp~~ik~~L~~TA~~~~~~~~~~~------~~~---~~~~~~~~~GaG~--vn~~~A~~ 492 (620)
+|+|+|||++|++||.+.......+. ... ..+...+++|+|+ .+++.+..
T Consensus 253 ~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 253 ELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp TCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred CCCHHHHHHHHHHhccccccCCccCccccCCCCccchhccCCcccccCCCcchhchhccCC
Confidence 99999999999999976432211000 000 1122456788888 77777765
No 33
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=7.2e-42 Score=386.76 Aligned_cols=307 Identities=18% Similarity=0.142 Sum_probs=190.7
Q ss_pred CCCccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCC
Q 042484 64 IPPNSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSA 143 (620)
Q Consensus 64 ~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 143 (620)
+++..+|+++++|+||+|||||||||++||||.++ ...+.. .|..+ ..++.+.
T Consensus 57 inv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n------------~~~~~~-------~~~~~--------~~dp~p~ 109 (600)
T 3hjr_A 57 LNLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN------------VRPGSK-------NVVTG--------SDDPTPT 109 (600)
T ss_dssp CCCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG------------BCSCCB-------CTTTS--------SSCCCCC
T ss_pred cCHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc------------cccCcc-------eeecC--------CCCCCCC
Confidence 45679999999999999999999999999999853 100000 01111 0112233
Q ss_pred CCCCCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHH-HHHHhCCCcEEeecH-
Q 042484 144 RDKNGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAF-DMAIHDGVDMLSVSL- 221 (620)
Q Consensus 144 ~D~~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai-~~a~~~gvdVIn~Sl- 221 (620)
.|..||||||||||||.. ++..+.||||+|+|+.+|++++. +.+..++++.|+ +++..++++|||+||
T Consensus 110 ~~~~gHGThVAGiIAa~~---------n~~g~~GVAp~A~l~~~rvl~~~-~~~~~~~~~~a~~~~~~~~~~~I~n~S~G 179 (600)
T 3hjr_A 110 DPDTAHGTSVSGIIAAVD---------NAIGTKGIAPRAQLQGFNLLDDN-SQQLQKDWLYALGDSNASRDNRVFNQSYG 179 (600)
T ss_dssp STTCCHHHHHHHHHHCCS---------SSSSCCCSSTTCEEEEECTTSTT-CCCCHHHHHHHTTSSHHHHTCSEEEECCC
T ss_pred CCCCChHHHHHHHHhEeC---------CCCCcEEeCCCCEEEEEEeecCC-CCccHHHHHHHhhhhhhhcCCCEEecccC
Confidence 467899999999999864 12347899999999999999887 667778877776 677888999999999
Q ss_pred -----------H-----HHHHH--HHHhcCcEEEEecCCCCCC--------------------CCcc--CCCCCceEEec
Q 042484 222 -----------V-----AIGSF--HAVQHGIVVVCSDGNEGLV--------------------DVTL--QNAAPRQIVVG 261 (620)
Q Consensus 222 -----------~-----~~~~~--~a~~~Gv~vV~AAGN~G~~--------------------~~t~--~~~ap~vitVg 261 (620)
. ..... ....+|+++|+||||.+.. .... ....+++|+||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~~~~IsVg 259 (600)
T 3hjr_A 180 MSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVS 259 (600)
T ss_dssp CCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGSSSEEEEE
T ss_pred ccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCccccCcceEEe
Confidence 1 11111 1236899999999997521 0111 11247899999
Q ss_pred ccccCCcccceEEeCCCeEEEEeeccCCCCCCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCC
Q 042484 262 ASTMDRDLSNYVVLGNNKRFKLISERAKGLPSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLP 341 (620)
Q Consensus 262 a~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~ 341 (620)
|++.+.....+...+....+....-...
T Consensus 260 A~~~~g~~a~yS~~G~~v~~~apg~~~~---------------------------------------------------- 287 (600)
T 3hjr_A 260 ALNADGVRSSYSSVGSNIFLSATGGEYG---------------------------------------------------- 287 (600)
T ss_dssp EECTTSSBCTTCCBCTTCCEEEECCSCS----------------------------------------------------
T ss_pred eecCCCCEeecccCCcceeeccCCCCCC----------------------------------------------------
Confidence 9876654333222222111111100000
Q ss_pred CCCCcccCCCccccEEEeecCCcceeeecccCCCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceeecCCCcEEec
Q 042484 342 EFGNDHTTDRHVLPASVITFNDGYYNLFFTFTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILKRRIPFNSIS 421 (620)
Q Consensus 342 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a~~~~y~~~s 421 (620)
.....++.. ...|..+ ............-.+.... ......|..++
T Consensus 288 -------~~~~~~vt~---~~pG~~~--------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s 333 (600)
T 3hjr_A 288 -------TDTPAMVTT---DLPGCDM--------------------GYNRTDDPSTNRLHGNSQL----DASCDYNGVMN 333 (600)
T ss_dssp -------SSSCCEEEE---CCSSTTS--------------------SSSSTTSCCSSTTTTCTTT----CTTCCEEEEEC
T ss_pred -------CCCcceeee---cCCCccc--------------------cccccCCcccccccccccc----CCCCCceeccc
Confidence 000000000 0000000 0000000000000000000 00346789999
Q ss_pred cccchhhhhhhhhhhhcccCCCCCHHHHHHHHHcccccCCCCcceeccC-------------------C-CCCCCCceec
Q 042484 422 GTSMSGPYISGIAGLPKILHPDWSPAAVQSAIMTTATTQDNKKQQILDA-------------------S-FTEATPFSYG 481 (620)
Q Consensus 422 GTSMAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~-------------------~-~~~~~~~~~G 481 (620)
|||||||||||++|||+|+||+||++|||++|++||++++....|+... . ....-...||
T Consensus 334 GTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yG 413 (600)
T 3hjr_A 334 GTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYG 413 (600)
T ss_dssp SHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTB
T ss_pred cccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccC
Confidence 9999999999999999999999999999999999999998776653210 0 1111245689
Q ss_pred ccccCccccCCC
Q 042484 482 AGHVQPNLAMDP 493 (620)
Q Consensus 482 aG~vn~~~A~~~ 493 (620)
+|+||+.+|++.
T Consensus 414 fG~vDA~~aV~~ 425 (600)
T 3hjr_A 414 FGLIDVNKALEL 425 (600)
T ss_dssp TCBCCHHHHHHH
T ss_pred CceecHHHHHHH
Confidence 999999999874
No 34
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=5e-42 Score=351.31 Aligned_cols=215 Identities=27% Similarity=0.334 Sum_probs=176.4
Q ss_pred ccccccCCCCCCcEEEEeccccCCCCcCcCCCCCCCCCCCcceeeecCCCCCcccCccccccccccCCCCCCCCCCCCCC
Q 042484 67 NSIWEKARYGEDIIIGNLDTGVWRESKSFGDEGFGPIPSKWKGICQNDKDARFHCNRYFNQDYAVHKGPLNSSFYSARDK 146 (620)
Q Consensus 67 ~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~D~ 146 (620)
...|+.. +|+||+|||||||||++||+|.+. ... ..+| .....|.
T Consensus 23 ~~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~------------~~~------------~~~~----------~~~~~d~ 67 (279)
T 3f7m_A 23 AYAYDTS-AGAGACVYVIDTGVEDTHPDFEGR------------AKQ------------IKSY----------ASTARDG 67 (279)
T ss_dssp SEEECTT-TTTTEEEEEEESCCCTTCGGGTTC------------EEE------------EEEC----------SSSSSCS
T ss_pred ceeecCC-CCCCCEEEEEcCCCCCCChhhccc------------ccc------------ccCC----------CCCCCCC
Confidence 3677766 899999999999999999999753 000 0011 0112378
Q ss_pred CCChhhhhHhhcccCCCCCceeccCCceeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHhCC-------CcEEee
Q 042484 147 NGHGSHTLSRAGGNFVAGASVFGFGKGTAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIHDG-------VDMLSV 219 (620)
Q Consensus 147 ~gHGTHVAGiaag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~~g-------vdVIn~ 219 (620)
.||||||||||+|+ ..||||+|+|+.+|++... +.+..+.++++|+++++++ ++||||
T Consensus 68 ~gHGT~vAgii~~~--------------~~GvAp~a~l~~~~v~~~~-~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~ 132 (279)
T 3f7m_A 68 HGHGTHCAGTIGSK--------------TWGVAKKVSIFGVKVLDDS-GSGSLSNIIAGMDFVASDRQSRNCPRRTVASM 132 (279)
T ss_dssp SSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTT-SCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEE
T ss_pred CCcHHHHHHHHhcC--------------ccccCCCCEEEEEEeeCCC-CCcCHHHHHHHHHHHHhccccccCCCCeEEEe
Confidence 89999999999975 3599999999999999887 7789999999999999976 899999
Q ss_pred cH-------HHHHHHHHHhcCcEEEEecCCCCCCCCcc-CCCCCceEEecccccCCcccceEEeCCCeEEEEeeccCCCC
Q 042484 220 SL-------VAIGSFHAVQHGIVVVCSDGNEGLVDVTL-QNAAPRQIVVGASTMDRDLSNYVVLGNNKRFKLISERAKGL 291 (620)
Q Consensus 220 Sl-------~~~~~~~a~~~Gv~vV~AAGN~G~~~~t~-~~~ap~vitVga~~~~~~~~~~~~~g~~~~~~g~~~~~~~~ 291 (620)
|| +..+...+.++|+++|+||||+|...... +...+++|+|||++.+
T Consensus 133 S~g~~~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------- 187 (279)
T 3f7m_A 133 SLGGGYSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN------------------------- 187 (279)
T ss_dssp CCCEECCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-------------------------
T ss_pred CCCcCccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC-------------------------
Confidence 99 67778888899999999999999654333 4456899999995422
Q ss_pred CCCceeeEEEccCCCcccccEEEEEeccchhHHHHHHHcCCcEEEEecCCCCCCcccCCCccccEEEeecCCcceeeecc
Q 042484 292 PSDKLFTFIRTLDPKKVKGKILVCLNVRSVDEGLQAALAGAADIVLVNLPEFGNDHTTDRHVLPASVITFNDGYYNLFFT 371 (620)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~ga~gvi~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~ 371 (620)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCcEEEEeCCceeecCCCCCceeeccCCCCCCCCCceee---------cCCCcEEeccccchhhhhhhhhhhhcccCC
Q 042484 372 FTRHPVGYIKRPTTEFGAKPAPYMAALSSKGPIHITPEILK---------RRIPFNSISGTSMSGPYISGIAGLPKILHP 442 (620)
Q Consensus 372 ~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~kPdi~a---------~~~~y~~~sGTSMAaP~VAG~aALl~~~~P 442 (620)
+.++.||++|| ++||.| ..+.|..++|||||||||||++|||+|++|
T Consensus 188 ---------------------~~~~~~S~~g~---~~di~ApG~~i~s~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p 243 (279)
T 3f7m_A 188 ---------------------DVRSTFSNYGR---VVDIFAPGTSITSTWIGGRTNTISGTSMATPHIAGLAAYLFGLEG 243 (279)
T ss_dssp ---------------------SBBCTTCCBST---TCCEEEECSSEEEECGGGCEEEECSHHHHHHHHHHHHHHHHHHTC
T ss_pred ---------------------CCCCCCCCCCC---CCeEEECCCCeEeecCCCCEEEeeEHHHHHHHHHHHHHHHHHhCC
Confidence 23456888887 567776 556799999999999999999999999999
Q ss_pred CCCHHHHHHHHHcccccCC
Q 042484 443 DWSPAAVQSAIMTTATTQD 461 (620)
Q Consensus 443 ~~sp~~ik~~L~~TA~~~~ 461 (620)
+ ++++||++|++||++..
T Consensus 244 ~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 244 G-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp C-CTTTHHHHHHHHSEESC
T ss_pred C-CHHHHHHHHHHhccccc
Confidence 9 99999999999998753
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.85 E-value=1.3e-22 Score=224.43 Aligned_cols=86 Identities=24% Similarity=0.382 Sum_probs=68.7
Q ss_pred eeeeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHh---CCCcEEeecH--------------HHHHHHHHHhcCcEE
Q 042484 174 TAKGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIH---DGVDMLSVSL--------------VAIGSFHAVQHGIVV 236 (620)
Q Consensus 174 ~~~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~---~gvdVIn~Sl--------------~~~~~~~a~~~Gv~v 236 (620)
.+.||||+|+|+.|++. ...+.++++|++|++ ++++|||||| +..+...|..+||+|
T Consensus 273 ~~~gvAp~a~i~~~~~~------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~v 346 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTV 346 (552)
T ss_dssp HHHHHCTTSEEEEEECC------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred hhhccCCCCeEEEEEcC------CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEE
Confidence 46799999999999963 246789999999998 7999999999 233445677899999
Q ss_pred EEecCCCCCCCC------c--cCCCCCceEEeccccc
Q 042484 237 VCSDGNEGLVDV------T--LQNAAPRQIVVGASTM 265 (620)
Q Consensus 237 V~AAGN~G~~~~------t--~~~~ap~vitVga~~~ 265 (620)
|+||||+|.... + .+...|+|++||+++.
T Consensus 347 v~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 347 LAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp EEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred EEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 999999996432 2 2334699999999764
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.75 E-value=1.8e-18 Score=182.56 Aligned_cols=89 Identities=19% Similarity=0.255 Sum_probs=69.9
Q ss_pred eeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHHh-CCCcEEeecH---------------HHHHHHHHHhcCcEEEEe
Q 042484 176 KGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAIH-DGVDMLSVSL---------------VAIGSFHAVQHGIVVVCS 239 (620)
Q Consensus 176 ~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~~-~gvdVIn~Sl---------------~~~~~~~a~~~Gv~vV~A 239 (620)
..+||+++++.|++.... .+..++++++|++|++ ++++|||||| +..+...|..+||+||+|
T Consensus 90 g~~aP~a~~~~~~~~~~~--~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~A 167 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQS--ASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVS 167 (372)
T ss_dssp HHTTSCEEEEEEEEECTT--SSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhcCCCCcEEEEEeCCCC--CcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 357899999999998654 2678899999999998 8999999999 122334566799999999
Q ss_pred cCCCCCCCC-------------ccCCCCCceEEecccccC
Q 042484 240 DGNEGLVDV-------------TLQNAAPRQIVVGASTMD 266 (620)
Q Consensus 240 AGN~G~~~~-------------t~~~~ap~vitVga~~~~ 266 (620)
+||+|...+ ..+...|+|++||+++..
T Consensus 168 sGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 168 SGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp CCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred ECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 999996532 222346999999997643
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.50 E-value=4.2e-08 Score=107.82 Aligned_cols=87 Identities=14% Similarity=0.123 Sum_probs=54.5
Q ss_pred eeecCCCeEEEEEeeeCCCCCCCHHHHHHHHHHHH--hCCCcEEeecH--------------HHHHHHHHHhcCcEEEEe
Q 042484 176 KGGSPKARVAGYKACWDGMGGCYDCDIIAAFDMAI--HDGVDMLSVSL--------------VAIGSFHAVQHGIVVVCS 239 (620)
Q Consensus 176 ~GvAP~A~l~~~kv~~~~~g~~~~~~i~~ai~~a~--~~gvdVIn~Sl--------------~~~~~~~a~~~Gv~vV~A 239 (620)
.+++++..++.|-..... ...+..+..+++.. .+-++|||+|| +......+..+||.|++|
T Consensus 262 ~a~~~~i~~~~~~~~g~~---~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~A 338 (544)
T 3edy_A 262 MSAGANISTWVYSSPGRH---EGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFA 338 (544)
T ss_dssp HHHSTTSEEEEECCCSCC---TTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hccCCCceEEEEecCCcc---cccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 345556666555432211 11233444444333 34678999999 233445677899999999
Q ss_pred cCCCCCCCC----------ccCCCCCceEEeccccc
Q 042484 240 DGNEGLVDV----------TLQNAAPRQIVVGASTM 265 (620)
Q Consensus 240 AGN~G~~~~----------t~~~~ap~vitVga~~~ 265 (620)
+||+|.... ..+...|||++||+++.
T Consensus 339 SGD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 339 SGDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp CCSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred cCCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 999996432 23334699999999864
No 38
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.23 E-value=1.6e-06 Score=70.21 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=43.1
Q ss_pred ccceeEEecceeeeEEEEcCHHHHHHHhcCCCeEEEEeceeeeeccCC
Q 042484 4 AHAIFYSYTRHINGFAAKLADAVAAEMAKHPKVVSVFLSKEKKLHTTH 51 (620)
Q Consensus 4 ~~~~~~~y~~~~~G~s~~~~~~~~~~L~~~~~V~~v~~~~~~~~~~~~ 51 (620)
..+++|+|++ |+||++++++++++.|+++|+|++|+|++.++++++.
T Consensus 33 g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 33 GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSAT 79 (80)
T ss_dssp TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC-
T ss_pred CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeeec
Confidence 4578999998 9999999999999999999999999999999988764
No 39
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.05 E-value=4.7e-06 Score=72.25 Aligned_cols=45 Identities=16% Similarity=0.143 Sum_probs=41.7
Q ss_pred cccceeEEecceeeeEEEEcCHHHHHHHhcCCCeEEEEeceeeee
Q 042484 3 LAHAIFYSYTRHINGFAAKLADAVAAEMAKHPKVVSVFLSKEKKL 47 (620)
Q Consensus 3 ~~~~~~~~y~~~~~G~s~~~~~~~~~~L~~~~~V~~v~~~~~~~~ 47 (620)
...+++|.|++.|+||+++++++++++|+++|+|++|+|++.++.
T Consensus 69 ~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 69 YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp CCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred cCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 345899999999999999999999999999999999999998765
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=97.74 E-value=2.9e-05 Score=68.10 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=40.5
Q ss_pred cceeEEecceeeeEEEEcCHHHHHHHhcCCCeEEEEeceeeee
Q 042484 5 HAIFYSYTRHINGFAAKLADAVAAEMAKHPKVVSVFLSKEKKL 47 (620)
Q Consensus 5 ~~~~~~y~~~~~G~s~~~~~~~~~~L~~~~~V~~v~~~~~~~~ 47 (620)
.+++|+|++.|+||++++++++++.|+++|+|.+|++++.++.
T Consensus 81 ~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 81 TKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp CEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 4789999999999999999999999999999999999998765
No 41
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=97.62 E-value=5.3e-05 Score=71.45 Aligned_cols=77 Identities=16% Similarity=0.001 Sum_probs=62.0
Q ss_pred ccccEEEEEe---ccchhHHHHHHHcCCcEEEEecCCCCCCc---cc-CCCccccEEEeecCCccee-eecccCCCcEEE
Q 042484 308 VKGKILVCLN---VRSVDEGLQAALAGAADIVLVNLPEFGND---HT-TDRHVLPASVITFNDGYYN-LFFTFTRHPVGY 379 (620)
Q Consensus 308 ~~gkivl~~~---~~~~~~~~~~~~~ga~gvi~~~~~~~~~~---~~-~~~~~~p~~~i~~~~g~~l-~~~~~~~~~~~~ 379 (620)
.++||+|++| |+|.+|..+++++||.++|+||+...+.. +. .....+|.++|+..+|+.| +.+..+...+++
T Consensus 103 ~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~Is~~~G~~L~~~L~~G~~Vtvt 182 (194)
T 3icu_A 103 QVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMV 182 (194)
T ss_dssp BCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEECHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEECHHHHHHHHHHHHCCCeEEEE
Confidence 4689999999 78999999999999999999998532211 11 1235799999999999999 999988888877
Q ss_pred EeCCc
Q 042484 380 IKRPT 384 (620)
Q Consensus 380 i~~~~ 384 (620)
|....
T Consensus 183 i~vg~ 187 (194)
T 3icu_A 183 IEVGK 187 (194)
T ss_dssp EEEEE
T ss_pred EECCC
Confidence 76543
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=97.40 E-value=0.00019 Score=57.16 Aligned_cols=42 Identities=17% Similarity=0.193 Sum_probs=38.6
Q ss_pred ceeEEec-ceeeeEEEEcCHHHHHHHhcC--CCeEEEEeceeeee
Q 042484 6 AIFYSYT-RHINGFAAKLADAVAAEMAKH--PKVVSVFLSKEKKL 47 (620)
Q Consensus 6 ~~~~~y~-~~~~G~s~~~~~~~~~~L~~~--~~V~~v~~~~~~~~ 47 (620)
++.+.|+ .+|+||+++++++.+++|+++ |.|.+||+++.+++
T Consensus 31 ~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 31 TITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp CCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred ceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 6889994 899999999999999999999 88999999998764
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.30 E-value=0.0054 Score=47.07 Aligned_cols=44 Identities=18% Similarity=0.326 Sum_probs=38.2
Q ss_pred cccceeEEecceeeeEEEEcCHHHHHHHhcCCCeEEEEeceeeee
Q 042484 3 LAHAIFYSYTRHINGFAAKLADAVAAEMAKHPKVVSVFLSKEKKL 47 (620)
Q Consensus 3 ~~~~~~~~y~~~~~G~s~~~~~~~~~~L~~~~~V~~v~~~~~~~~ 47 (620)
.-.++.++|. .+++++++++++.++.|+++|+|++|++|...+.
T Consensus 21 ~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 21 IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp GTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred CCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 3467888884 5899999999999999999999999999987653
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.62 E-value=0.027 Score=48.87 Aligned_cols=51 Identities=22% Similarity=0.392 Sum_probs=43.6
Q ss_pred ceEEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEcc
Q 042484 551 GSITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAKN 606 (620)
Q Consensus 551 ~~~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~~ 606 (620)
...+.+++|+|+|. +..|+.....| ++++|++.++ ++|++..++|+|.+..
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P~~ 92 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEPQS 92 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECCSS
T ss_pred CeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEcCC
Confidence 57888999999999 88888776443 6668999999 8999999999999864
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=91.90 E-value=0.13 Score=54.74 Aligned_cols=65 Identities=23% Similarity=0.209 Sum_probs=52.3
Q ss_pred CcccccEEEEEe--ccchhHHHHHHHcCCcEEEEecCCCCCCc--cc-CCCccccEEEeecCCccee-eec
Q 042484 306 KKVKGKILVCLN--VRSVDEGLQAALAGAADIVLVNLPEFGND--HT-TDRHVLPASVITFNDGYYN-LFF 370 (620)
Q Consensus 306 ~~~~gkivl~~~--~~~~~~~~~~~~~ga~gvi~~~~~~~~~~--~~-~~~~~~p~~~i~~~~g~~l-~~~ 370 (620)
.+++|||+|+.+ |.+..|..+++++||.|+|++++...... +. .....+|.+.|+..+++.| ..+
T Consensus 111 ~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l 181 (421)
T 2ek8_A 111 KDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANL 181 (421)
T ss_dssp SCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHH
T ss_pred CCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHh
Confidence 379999999999 78999999999999999999998642111 11 1345789999999999888 777
No 46
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.88 E-value=0.2 Score=42.31 Aligned_cols=55 Identities=13% Similarity=0.158 Sum_probs=43.0
Q ss_pred ceEEEEEEEEEcCC-CceEEEEEeC-CCCeEEEEecceEEEeeCCeEEEEEEEEEEcc
Q 042484 551 GSITVTRRVKNVGS-PGTYQARVKT-PQGVSVTMAPKSLKFINVGEEKSFKVNIKAKN 606 (620)
Q Consensus 551 ~~~~~~rtv~n~~~-~~ty~~~~~~-~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~~ 606 (620)
...+.+++++|.|+ +..|+..... +.+...+++|..-.+ .||++++++|+|.+..
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~ 82 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII 82 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC
Confidence 46777899999999 9999984311 112346778999999 8999999999998854
No 47
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=91.01 E-value=0.093 Score=62.60 Aligned_cols=25 Identities=24% Similarity=0.356 Sum_probs=23.1
Q ss_pred CCCCCCcEEEEeccccCCCCcCcCC
Q 042484 73 ARYGEDIIIGNLDTGVWRESKSFGD 97 (620)
Q Consensus 73 ~~~G~GV~VgVIDTGId~~Hp~f~~ 97 (620)
.+.|+||+|||+|||||+.+|-|+-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 5789999999999999999999963
No 48
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=90.86 E-value=0.96 Score=40.02 Aligned_cols=53 Identities=11% Similarity=0.056 Sum_probs=41.9
Q ss_pred ceEEEEEEEEEcCC-CceEEEEEeCC----CCeEEEEecceEEEeeCCeEEEEEEEEEE
Q 042484 551 GSITVTRRVKNVGS-PGTYQARVKTP----QGVSVTMAPKSLKFINVGEEKSFKVNIKA 604 (620)
Q Consensus 551 ~~~~~~rtv~n~~~-~~ty~~~~~~~----~g~~v~v~p~~l~~~~~g~~~~~~v~~~~ 604 (620)
...+-++||+|.|. +.+|++..... ..--++++|..-++ .||++..++|++..
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYV 100 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECB
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEE
Confidence 35677889999999 99999985421 11136678999999 99999999999985
No 49
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=90.81 E-value=0.26 Score=52.66 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=55.1
Q ss_pred CCcccccEEEEEe--cc---------chhH----HHHHHHcCCcEEEEecCCCCCCc------c--cCCCccccEEEeec
Q 042484 305 PKKVKGKILVCLN--VR---------SVDE----GLQAALAGAADIVLVNLPEFGND------H--TTDRHVLPASVITF 361 (620)
Q Consensus 305 ~~~~~gkivl~~~--~~---------~~~~----~~~~~~~ga~gvi~~~~~~~~~~------~--~~~~~~~p~~~i~~ 361 (620)
+.+++|||||+.+ |. +..+ ..++.++||.|+|++++...... . ......+|.+.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 4689999999988 43 2333 34689999999999987542211 1 11235789999999
Q ss_pred CCccee-eecccCCCcEEEEeC
Q 042484 362 NDGYYN-LFFTFTRHPVGYIKR 382 (620)
Q Consensus 362 ~~g~~l-~~~~~~~~~~~~i~~ 382 (620)
.+++.| +.+..+...++++..
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~ 225 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLEL 225 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEE
Confidence 999999 877766555555543
No 50
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=87.65 E-value=2.6 Score=35.92 Aligned_cols=53 Identities=23% Similarity=0.219 Sum_probs=44.1
Q ss_pred eEEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEcc
Q 042484 552 SITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAKN 606 (620)
Q Consensus 552 ~~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~~ 606 (620)
...+++.|.|... +.+|.++++...++++. .|..+++ ++|+.+++.|.+....
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 4678899999999 99999999987776653 3556888 8999999999998864
No 51
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=87.57 E-value=0.35 Score=53.96 Aligned_cols=37 Identities=14% Similarity=0.168 Sum_probs=33.8
Q ss_pred CcccccEEEEEe--ccchhHHHHHHHcCCcEEEEecCCC
Q 042484 306 KKVKGKILVCLN--VRSVDEGLQAALAGAADIVLVNLPE 342 (620)
Q Consensus 306 ~~~~gkivl~~~--~~~~~~~~~~~~~ga~gvi~~~~~~ 342 (620)
-+++|||+|+.+ |.+..|..++.++||.|+|++++..
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~ 166 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQT 166 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTT
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccc
Confidence 479999999999 8899999999999999999998753
No 52
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=84.31 E-value=0.7 Score=52.14 Aligned_cols=36 Identities=28% Similarity=0.290 Sum_probs=33.4
Q ss_pred CCcccccEEEEEe--ccchhHHHHHHHcCCcEEEEecC
Q 042484 305 PKKVKGKILVCLN--VRSVDEGLQAALAGAADIVLVNL 340 (620)
Q Consensus 305 ~~~~~gkivl~~~--~~~~~~~~~~~~~ga~gvi~~~~ 340 (620)
..+++|||+|+.+ |.+..|..+++++||.|+|+|++
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~d 187 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSD 187 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcC
Confidence 4579999999999 88999999999999999999986
No 53
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=83.01 E-value=3.5 Score=42.60 Aligned_cols=55 Identities=11% Similarity=0.099 Sum_probs=43.7
Q ss_pred ceEEEEEEEEEcCC-CceEEEEEeCCCCeE----EEEecceEEEeeCCeEEEEEEEEEEcc
Q 042484 551 GSITVTRRVKNVGS-PGTYQARVKTPQGVS----VTMAPKSLKFINVGEEKSFKVNIKAKN 606 (620)
Q Consensus 551 ~~~~~~rtv~n~~~-~~ty~~~~~~~~g~~----v~v~p~~l~~~~~g~~~~~~v~~~~~~ 606 (620)
...+-++||+|+|. +.+|++......... ++++|..-++ .||++.+++|++....
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~ 105 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSK 105 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCT
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECH
Confidence 46777889999999 999999765432222 6788999999 9999999999997653
No 54
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=76.44 E-value=4 Score=38.81 Aligned_cols=52 Identities=13% Similarity=0.126 Sum_probs=38.2
Q ss_pred ceEEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEcc
Q 042484 551 GSITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAKN 606 (620)
Q Consensus 551 ~~~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~~ 606 (620)
...+.+++++|.|+ +..++... .|.-+++..+| -.+ .||++.+++|+++...
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~--~~I-~PG~~g~I~vt~~~~~ 71 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRA--FRL-QAREPRELNLSLAVPR 71 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCE--EEE-CSSSCEEEEEEECCCT
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEeeeCc--cee-CCCCceEEEEEEcchh
Confidence 45667889999998 88888754 36565554344 445 8999999999998754
No 55
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=76.39 E-value=11 Score=32.33 Aligned_cols=51 Identities=12% Similarity=0.143 Sum_probs=43.6
Q ss_pred eEEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEc
Q 042484 552 SITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAK 605 (620)
Q Consensus 552 ~~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~ 605 (620)
..+-.++|+|.++ ...|.++-.+|.- ..|.|..=.+ .||++..+.|++...
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecCC
Confidence 4556788999999 9999999999977 4568998888 899999999999873
No 56
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=75.63 E-value=9.7 Score=43.82 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=34.4
Q ss_pred EEeccccchhhhhhhhhhhhcccCCCCC-HHHHHHHHHccccc
Q 042484 418 NSISGTSMSGPYISGIAGLPKILHPDWS-PAAVQSAIMTTATT 459 (620)
Q Consensus 418 ~~~sGTSMAaP~VAG~aALl~~~~P~~s-p~~ik~~L~~TA~~ 459 (620)
..++|..++-|.+--+-|+|...+|.-- -..|-++|.--..+
T Consensus 620 Vl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNP 662 (845)
T 3abz_A 620 VNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVP 662 (845)
T ss_dssp EEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCC
T ss_pred EEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCC
Confidence 5678999999999999999999999765 67788888765543
No 57
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=74.58 E-value=7.9 Score=43.70 Aligned_cols=55 Identities=20% Similarity=0.279 Sum_probs=35.6
Q ss_pred ceEEEEEEEEEcCC-CceEE--EEEeCCCCe-----EEEEecceEEEeeCCeEEEEEEEEEEcc
Q 042484 551 GSITVTRRVKNVGS-PGTYQ--ARVKTPQGV-----SVTMAPKSLKFINVGEEKSFKVNIKAKN 606 (620)
Q Consensus 551 ~~~~~~rtv~n~~~-~~ty~--~~~~~~~g~-----~v~v~p~~l~~~~~g~~~~~~v~~~~~~ 606 (620)
...+++++|||+|+ +..-. +-+..|.+. .--.-=+++.| +|||+++++++++..+
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHHH
Confidence 35788999999998 44444 444555321 11111223456 8999999999998764
No 58
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=73.28 E-value=14 Score=32.98 Aligned_cols=52 Identities=15% Similarity=0.220 Sum_probs=43.9
Q ss_pred ceEEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEc
Q 042484 551 GSITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAK 605 (620)
Q Consensus 551 ~~~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~ 605 (620)
...+-.++|+|.+. ...|++.-.+|.- ..|.|..=.+ .||++..++|++...
T Consensus 35 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 35 GEKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp SCCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred ceEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 34456889999999 9999999999976 5568999888 899999999999764
No 59
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=71.51 E-value=10 Score=32.61 Aligned_cols=52 Identities=13% Similarity=0.243 Sum_probs=44.3
Q ss_pred ceEEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEc
Q 042484 551 GSITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAK 605 (620)
Q Consensus 551 ~~~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~ 605 (620)
...+-.++|+|.++ ...|++.-.+|.- ..|.|..=.+ .||++..+.|++...
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 45677889999999 9999999988866 5568998777 899999999999874
No 60
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=70.63 E-value=13 Score=32.14 Aligned_cols=51 Identities=22% Similarity=0.209 Sum_probs=36.5
Q ss_pred CceEEEEEEEEEcCC--CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEE
Q 042484 550 SGSITVTRRVKNVGS--PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKA 604 (620)
Q Consensus 550 ~~~~~~~rtv~n~~~--~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~ 604 (620)
+...+++.||+|.|. ...|.+.+-.. |-.+. -....| .+|+++++++++..
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyvn-g~~v~--t~~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYIN-GTLYK--NWTVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEET-TEEEE--EEEEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEEC-CEEEe--eEEecc-CCCCeEEEEEEEEc
Confidence 467899999999998 57788776553 43333 223456 88999888888764
No 61
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=69.79 E-value=21 Score=29.80 Aligned_cols=49 Identities=14% Similarity=0.142 Sum_probs=41.4
Q ss_pred EEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEc
Q 042484 554 TVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAK 605 (620)
Q Consensus 554 ~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~ 605 (620)
+-+++++|.++ ...|+++-..|.- ..|.|..=.+ +||++.++.|+....
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 45788999999 9999999888877 4558988777 899999999998763
No 62
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=67.39 E-value=22 Score=30.03 Aligned_cols=50 Identities=6% Similarity=0.050 Sum_probs=41.6
Q ss_pred EEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEc
Q 042484 553 ITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAK 605 (620)
Q Consensus 553 ~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~ 605 (620)
.+.+++|+|.++ ...|+++-..|.- ..|.|..=.+ +||++.++.|+..+.
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECSC
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 366788999999 9999999888877 4457988777 899999999998763
No 63
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=66.11 E-value=11 Score=42.73 Aligned_cols=66 Identities=23% Similarity=0.465 Sum_probs=42.0
Q ss_pred ccCCCeEEeecc-----CceEEEEEEEEEcCC---CceEEEEEeCCCCeEEEEecc-------eE-EEeeCCeEEEEEEE
Q 042484 538 NFNYPSITVPKL-----SGSITVTRRVKNVGS---PGTYQARVKTPQGVSVTMAPK-------SL-KFINVGEEKSFKVN 601 (620)
Q Consensus 538 ~ln~psi~~~~~-----~~~~~~~rtv~n~~~---~~ty~~~~~~~~g~~v~v~p~-------~l-~~~~~g~~~~~~v~ 601 (620)
=|.|..|...++ ....+++++|||+|+ .+.-.+-+..|.+ .+. .|. ++ .| +|||+++++++
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~-~~~-~P~k~L~gF~kv~~L-~pGes~~V~~~ 673 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKG-KID-KPFQELKAFHKTRLL-NPGESEEVVLE 673 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCS-SSC-CCSCEEEEEEECCCB-CTTCEEEEEEE
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCC-CCC-CchHHhhcccccccC-CCCCeEEEEEE
Confidence 345555543332 356889999999998 5555555665543 111 222 23 45 89999999999
Q ss_pred EEEcc
Q 042484 602 IKAKN 606 (620)
Q Consensus 602 ~~~~~ 606 (620)
++..+
T Consensus 674 l~~~~ 678 (721)
T 2x41_A 674 IPVRD 678 (721)
T ss_dssp EEGGG
T ss_pred ECHHH
Confidence 98764
No 64
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=63.69 E-value=13 Score=32.83 Aligned_cols=52 Identities=13% Similarity=0.240 Sum_probs=43.8
Q ss_pred ceEEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEc
Q 042484 551 GSITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAK 605 (620)
Q Consensus 551 ~~~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~ 605 (620)
...+-.++|+|.+. ...|+++-.+|.- ..|.|..=.+ .||++..+.|++...
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 34566789999999 9999999999977 4558998777 899999999999874
No 65
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=59.18 E-value=36 Score=32.02 Aligned_cols=52 Identities=15% Similarity=0.368 Sum_probs=35.6
Q ss_pred ceEEEEEEEEEcCC-CceEEEEEeCCC-CeEEEEecceEEEeeCCeEEEEEEEEEEcc
Q 042484 551 GSITVTRRVKNVGS-PGTYQARVKTPQ-GVSVTMAPKSLKFINVGEEKSFKVNIKAKN 606 (620)
Q Consensus 551 ~~~~~~rtv~n~~~-~~ty~~~~~~~~-g~~v~v~p~~l~~~~~g~~~~~~v~~~~~~ 606 (620)
...+.+++++|+|+ +...+- ++..- -..+ ++..-.+ +|||+.+++|+++...
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~-v~~scgct~~--~~~~~~i-~PGe~~~i~v~~~~~~ 187 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHS-VTTRNPALTA--VPDRTEI-KPGGSTLLRIAVDPQV 187 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEE-EEECSTTEEE--EESCSEE-CTTCEEEEEEEECHHH
T ss_pred CeEEEEEEEEECCCCCEEEEE-EEeCCCCEee--ecCCccC-CCCCEEEEEEEEecCC
Confidence 56778899999998 666543 33332 3333 3444456 8999999999998754
No 66
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=44.46 E-value=1.4e+02 Score=25.15 Aligned_cols=55 Identities=20% Similarity=0.132 Sum_probs=35.5
Q ss_pred cCceEEEEEEEEEcCC-CceEEE--------EEeCCCCeEEE---------EecceEEEeeCCeEEEEEEEEEE
Q 042484 549 LSGSITVTRRVKNVGS-PGTYQA--------RVKTPQGVSVT---------MAPKSLKFINVGEEKSFKVNIKA 604 (620)
Q Consensus 549 ~~~~~~~~rtv~n~~~-~~ty~~--------~~~~~~g~~v~---------v~p~~l~~~~~g~~~~~~v~~~~ 604 (620)
.++...++++|+|.++ +.+... .+.-..|-.|- --....+| +|||+++|+.+++.
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE 88 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC
Confidence 3468889999999996 544433 33333343331 11234577 89999999999983
No 67
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=41.98 E-value=1.2e+02 Score=25.11 Aligned_cols=67 Identities=15% Similarity=0.214 Sum_probs=46.5
Q ss_pred eEEeeccCceEEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEccccCCCCeEEEEEE
Q 042484 543 SITVPKLSGSITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAKNASVTKDYVFGELI 619 (620)
Q Consensus 543 si~~~~~~~~~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~~~~~~~~~~~g~~~ 619 (620)
.+.|.....-..++++|+|-.. ..-|+-.+..+.+-.+++ .+ ..-.+-.++|.+.... ..|..|.+.
T Consensus 39 ~L~I~F~~~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I-----~L-~~~~~G~Y~L~i~~~~----~~~l~G~F~ 106 (108)
T 3d33_A 39 LLTLKNASPDRDMTIRITDMAKGGVVYENDIPEVQSAYITI-----SI-ANFPAEEYKLEITGTP----SGHLTGYFT 106 (108)
T ss_dssp EEEEEESSCCSEEEEEEEETTTCCEEEEEEECGGGTTEEEE-----EC-TTSCSEEEEEEEEEES----SCEEEEEEE
T ss_pred EEEEEECCcCCCEEEEEEECCCCcEEEEEeecCCCCcEEEE-----Ec-CCccCceEEEEEEeCC----CCEEEEEEE
Confidence 4445544456788999998777 889999887776555543 33 2234678888887754 788888874
No 68
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=40.59 E-value=92 Score=26.07 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=18.4
Q ss_pred CceEEEEEEEEEcCC--CceEEEEEe
Q 042484 550 SGSITVTRRVKNVGS--PGTYQARVK 573 (620)
Q Consensus 550 ~~~~~~~rtv~n~~~--~~ty~~~~~ 573 (620)
+...+++.+|+|.|. ...+.+.+.
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEE
Confidence 467899999999997 555666654
No 69
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=40.06 E-value=6.2 Score=33.59 Aligned_cols=52 Identities=17% Similarity=0.255 Sum_probs=33.1
Q ss_pred EEEEEEEEcCC-CceEEEEEe-CCCCeEEEEecceEEEe-eCCeEEEEEEEEEEc
Q 042484 554 TVTRRVKNVGS-PGTYQARVK-TPQGVSVTMAPKSLKFI-NVGEEKSFKVNIKAK 605 (620)
Q Consensus 554 ~~~rtv~n~~~-~~ty~~~~~-~~~g~~v~v~p~~l~~~-~~g~~~~~~v~~~~~ 605 (620)
.+..-++|.+. ..+..+.++ .|.|++++++|+.++++ ..-.+++|.|+++..
T Consensus 56 ~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~ 110 (119)
T 2kq1_A 56 EVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMI 110 (119)
T ss_dssp EEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCC
T ss_pred EEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEEC
Confidence 34444555553 333444555 68899999999998875 444566777766553
No 70
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=39.93 E-value=47 Score=36.21 Aligned_cols=63 Identities=14% Similarity=0.144 Sum_probs=42.7
Q ss_pred CCCeEEeeccCceEEEEEEEEEcCC-CceE-EEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEcc
Q 042484 540 NYPSITVPKLSGSITVTRRVKNVGS-PGTY-QARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAKN 606 (620)
Q Consensus 540 n~psi~~~~~~~~~~~~rtv~n~~~-~~ty-~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~~ 606 (620)
..|.+++.. +++.+++.+|+|-+. +..- ++++..|.+.+++. ....+ ++|++.+++++++.+.
T Consensus 363 ~~~~~~~~~-g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~ 427 (601)
T 1w8o_A 363 TIPDVALEP-GQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPA 427 (601)
T ss_dssp ECCCEEECT-TCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCT
T ss_pred cCccceecC-CceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCC
Confidence 346676664 468889999999765 3322 44466688877765 34455 7888888887777764
No 71
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=36.57 E-value=16 Score=26.99 Aligned_cols=32 Identities=6% Similarity=0.025 Sum_probs=25.0
Q ss_pred hhhhhhhhhhhcccCCCCCHHHHHHHHHcccc
Q 042484 427 GPYISGIAGLPKILHPDWSPAAVQSAIMTTAT 458 (620)
Q Consensus 427 aP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~ 458 (620)
.|..--....|++.||+++...|+.+|...=.
T Consensus 6 ~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 6 SGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp SSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 33444566779999999999999999987643
No 72
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=29.71 E-value=1.4e+02 Score=24.69 Aligned_cols=61 Identities=16% Similarity=0.158 Sum_probs=28.7
Q ss_pred CCCeEEeeccCceEEEEEEEEEcCCCceEEEEEe-----CCCCeEEEEecceEEEeeCCe-EEEEEEEE
Q 042484 540 NYPSITVPKLSGSITVTRRVKNVGSPGTYQARVK-----TPQGVSVTMAPKSLKFINVGE-EKSFKVNI 602 (620)
Q Consensus 540 n~psi~~~~~~~~~~~~rtv~n~~~~~ty~~~~~-----~~~g~~v~v~p~~l~~~~~g~-~~~~~v~~ 602 (620)
.-+++.+....+..+++++-+.-. ..+-.+.+. +.+|.........|+| .+|| +++++|.+
T Consensus 8 ~~~~y~V~E~~g~~~v~V~R~g~~-~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F-~~Get~k~i~V~I 74 (114)
T 3e9t_A 8 EPGHYTVMENCGEFEVRVVRRGDI-STYASVEYETQDGTASAGTDFVGRKGLLSF-PPGVDEQRFRIEV 74 (114)
T ss_dssp SSSEEEEETTCCEEEEEEEEEECC-SSCEEEEEEEECSSSCBTTTBCCCEEEEEE-CTTCCEEEEEEEB
T ss_pred eCCEEEEEcCCeEEEEEEEEECCC-CeeEEEEEEeECCccCCCCCceEcceEEEE-eCCcEEEEEEEEE
Confidence 345666665444444443333312 333333332 2234334334457888 7777 35555544
No 73
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=29.04 E-value=72 Score=25.55 Aligned_cols=26 Identities=19% Similarity=0.391 Sum_probs=21.4
Q ss_pred EEEecceEEEeeCCeEEEEEEEEEEcc
Q 042484 580 VTMAPKSLKFINVGEEKSFKVNIKAKN 606 (620)
Q Consensus 580 v~v~p~~l~~~~~g~~~~~~v~~~~~~ 606 (620)
|++.|..+++ ..|++..++.++.+..
T Consensus 9 i~l~~~~~~l-~vG~t~~L~atv~P~~ 34 (91)
T 2l04_A 9 MTVTPASTSV-VKGQSTTLTVAFQPEG 34 (91)
T ss_dssp EEEECCCEEE-ETTCEEEEEEEECCSS
T ss_pred EEEeCCceEE-EcCCEEEEEEEEeccc
Confidence 6678899999 7899988888887754
No 74
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=28.66 E-value=2.4e+02 Score=23.01 Aligned_cols=64 Identities=11% Similarity=0.045 Sum_probs=44.1
Q ss_pred eEEeeccCceEEEEEEEEEcCC-CceEEEEEeCCCCeEEEEecceEEEeeCCeEEEEEEEEEEccccCCCCeEEEEEE
Q 042484 543 SITVPKLSGSITVTRRVKNVGS-PGTYQARVKTPQGVSVTMAPKSLKFINVGEEKSFKVNIKAKNASVTKDYVFGELI 619 (620)
Q Consensus 543 si~~~~~~~~~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~~~~~~~~~~~g~~~ 619 (620)
-++|........+++||+|... ..-|.-.+..|.-+++ .+ ..-++-+|+|.+... ..|..|.++
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~~i~I-------dL-nge~sG~Y~IeI~~~-----~~~LtG~F~ 99 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTSIVMI-------DM-SSCEKGEYTIHIILN-----DCLLEGTFT 99 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCSEEEE-------EC-TTSCSEEEEEEEEET-----TEEEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCcEEEE-------Ec-CCCcCceEEEEEEeC-----CcEEEEEEE
Confidence 5566655566788999999876 8888887777643333 33 333577888888774 467777664
No 75
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=27.02 E-value=1.6e+02 Score=29.90 Aligned_cols=52 Identities=17% Similarity=0.337 Sum_probs=31.9
Q ss_pred CceEEEEEEEEEcCC-CceE---EE-E--Ee----------CC------CCeEEEEecceEEEeeCCeEEEEEEEEEEc
Q 042484 550 SGSITVTRRVKNVGS-PGTY---QA-R--VK----------TP------QGVSVTMAPKSLKFINVGEEKSFKVNIKAK 605 (620)
Q Consensus 550 ~~~~~~~rtv~n~~~-~~ty---~~-~--~~----------~~------~g~~v~v~p~~l~~~~~g~~~~~~v~~~~~ 605 (620)
+.+.+++++|||.|+ +..- .. . .. -| .|+ +|+|+. -+ .|||+++++|+++-.
T Consensus 263 gR~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL--~vsd~~-pI-~PGETr~~~v~a~da 337 (382)
T 1yew_A 263 GRAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGL--SVSDNS-PL-APGETRTVDVTASDA 337 (382)
T ss_dssp CSEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCE--EESCCS-CB-CTTCEEEEEEEEECH
T ss_pred CcEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCc--eeCCCC-Cc-CCCceeEEEEEeehH
Confidence 357888999999996 3221 10 0 00 11 133 445554 23 899999999998764
No 76
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=26.45 E-value=2.5e+02 Score=26.91 Aligned_cols=52 Identities=15% Similarity=0.217 Sum_probs=37.3
Q ss_pred ceEEEEEEEEEcCCCceEEEE--EeCC------C--CeEEEEecceEEEeeCCeEEEEEEEEEE
Q 042484 551 GSITVTRRVKNVGSPGTYQAR--VKTP------Q--GVSVTMAPKSLKFINVGEEKSFKVNIKA 604 (620)
Q Consensus 551 ~~~~~~rtv~n~~~~~ty~~~--~~~~------~--g~~v~v~p~~l~~~~~g~~~~~~v~~~~ 604 (620)
+....+++|+|.++ ..|.+. ++.. . ..-+.|+|..+.+ ++|+++.+.|....
T Consensus 42 ~~k~~sl~l~N~~~-~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~ 103 (257)
T 3q48_A 42 SEREVTLRVSNTSG-TPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLK 103 (257)
T ss_dssp TCSEEEEEEEECSS-SCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECC
T ss_pred CCcEEEEEEEeCCC-CeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECC
Confidence 45667889999885 345544 3321 1 2347889999999 89999999997654
No 77
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=23.92 E-value=2.3e+02 Score=27.01 Aligned_cols=66 Identities=6% Similarity=0.085 Sum_probs=40.5
Q ss_pred ccccCCCeEEeeccCceEEEEEEEEEcCC-CceEEEEEeCCCCeEEEEe-----cceEEEeeCCeEEEEEEEEEE
Q 042484 536 LVNFNYPSITVPKLSGSITVTRRVKNVGS-PGTYQARVKTPQGVSVTMA-----PKSLKFINVGEEKSFKVNIKA 604 (620)
Q Consensus 536 ~~~ln~psi~~~~~~~~~~~~rtv~n~~~-~~ty~~~~~~~~g~~v~v~-----p~~l~~~~~g~~~~~~v~~~~ 604 (620)
..++|+|...+. +....+..+|.|..+ ....++.+....++...-. ...+.+ ++++++++...+.+
T Consensus 83 fv~~~LP~sv~r--GE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v-~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 83 FIDLQMPYSVVK--NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPI-KALSSRAVPFVIVP 154 (252)
T ss_dssp EEEECCCSCEET--TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEE-CTTEEEEEEEEEEE
T ss_pred EEEcCCCcEEee--CCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEE-CCCCeEEEEEEEEe
Confidence 456778766543 367788889999987 7777777766544433211 122455 56666666655554
No 78
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=20.49 E-value=1.9e+02 Score=24.73 Aligned_cols=61 Identities=21% Similarity=0.313 Sum_probs=28.7
Q ss_pred cCCCeEEeeccCceEEEEEEEEEcCC-CceEEEEEe-----CCCCeEEEEecceEEEeeCCeE-EEEEEEE
Q 042484 539 FNYPSITVPKLSGSITVTRRVKNVGS-PGTYQARVK-----TPQGVSVTMAPKSLKFINVGEE-KSFKVNI 602 (620)
Q Consensus 539 ln~psi~~~~~~~~~~~~rtv~n~~~-~~ty~~~~~-----~~~g~~v~v~p~~l~~~~~g~~-~~~~v~~ 602 (620)
+.-+++.+....+..++ +|+=.|. ..+-.+.+. +.+|.........|+| .+||+ ++++|.+
T Consensus 9 F~~~~y~V~E~~g~~~v--~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F-~~Get~k~i~V~I 76 (137)
T 3ead_A 9 FEPGHYTVMENCGEFEV--RVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSF-PPGVDEQRFRIEV 76 (137)
T ss_dssp ESSCEEEEEGGGCEEEE--EEEEESCCSSCEEEEEEEECSSSCBTTTBCCCEEEEEE-CTTCCEEEEEEEB
T ss_pred EcCCEEEEECCCeEEEE--EEEEECCCCceEEEEEEeECCCcCCCCcEeEeeEEEEE-CCCceEEEEEEEE
Confidence 44456666654444444 3333344 333333332 2223333333456788 67763 4555444
No 79
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=20.39 E-value=3.6e+02 Score=22.07 Aligned_cols=54 Identities=24% Similarity=0.408 Sum_probs=36.4
Q ss_pred ceEEEEEEEEEcCC-C-ceEEEEEeCCCCeEEE--------EecceEEEe--------eC-CeEEEEEEEEEE
Q 042484 551 GSITVTRRVKNVGS-P-GTYQARVKTPQGVSVT--------MAPKSLKFI--------NV-GEEKSFKVNIKA 604 (620)
Q Consensus 551 ~~~~~~rtv~n~~~-~-~ty~~~~~~~~g~~v~--------v~p~~l~~~--------~~-g~~~~~~v~~~~ 604 (620)
...+.+++|+|.+. + ..|++....|.|.+|+ .+-..++++ .+ |++.+|-+....
T Consensus 15 ~Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~it~~Wna~~s~sG~~vt~~n~~wN~~la~~G~s~~fGf~g~~ 87 (107)
T 3ndz_E 15 SGASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANGGTQSFGFNINY 87 (107)
T ss_dssp SEEEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTTEEEEEEEEEEE
T ss_pred CCEEEEEEEEeCCCCcccCcEEEEEcCCCCEEecccceEEEecCCEEEEEECCcccccCCCCccEEEEEEEeC
Confidence 45677889999986 4 4588888887665442 223344443 56 888888887775
Done!