BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042486
(635 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 163/298 (54%), Gaps = 24/298 (8%)
Query: 338 SLKVYTFEELQAATDDFNPSCWIK----GSVYRGKIG-GDFVAIKKVYGDASD------- 385
LK ++ ELQ A+D+F+ + G VY+G++ G VA+K++ +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 386 -QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK--GGKFLDWAQRIQ 442
++++++ H +L+RL G C LVY NGS++ + ++ LDW +R +
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
IAL A GL YLH +P +H+D+K +N+LLD +F A + +F LA+ + ++
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 202
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEA---PALYSEENMLLVDVLN 559
+ GT G++APEYL G S K DV+ +GV++LE+++G+ A L ++++++L+D +
Sbjct: 203 -VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+L E+ L L+D +QGNY +I++ C + P RP M ++ + +
Sbjct: 262 GLLK----EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 163/298 (54%), Gaps = 24/298 (8%)
Query: 338 SLKVYTFEELQAATDDFNPSCWIK----GSVYRGKIG-GDFVAIKKVYGDASD------- 385
LK ++ ELQ A+D+F + G VY+G++ G VA+K++ + +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 386 -QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK--GGKFLDWAQRIQ 442
++++++ H +L+RL G C LVY NGS++ + ++ LDW +R +
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
IAL A GL YLH +P +H+D+K +N+LLD +F A + +F LA+ + ++ +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH--VXX 193
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEA---PALYSEENMLLVDVLN 559
+ G G++APEYL G S K DV+ +GV++LE+++G+ A L ++++++L+D +
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+L E+ L L+D +QGNY +I++ C + P RP M ++ + +
Sbjct: 254 GLLK----EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 149/295 (50%), Gaps = 32/295 (10%)
Query: 342 YTFEELQAATDDFNPSCWIKGS----------VYRGKIGGDFVAIKKVYG---------- 381
++F EL+ T++F+ G VY+G + VA+KK+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 382 -DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND-KGGKFLDWAQ 439
+IK++ K H +L+ LLG +G + LVY NGSL ++ G L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
R +IA A G+N+LH H+H+DIK +N+LLD F AKI++F LAR +E+ +
Sbjct: 135 RCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKF-AQTV 190
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
+ S IVGT YMAPE L G ++ K D+Y+FGV++LE+++G A + E +LL
Sbjct: 191 MXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
++ E+ + M+ + + V A+ + CL + + RP + K+ Q
Sbjct: 250 IEDEEKTIEDYIDKKMNDA---DSTSVEAMYSV--ASQCLHEKKNKRPDIKKVQQ 299
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 148/295 (50%), Gaps = 32/295 (10%)
Query: 342 YTFEELQAATDDFNPSCWIKGS----------VYRGKIGGDFVAIKKVYG---------- 381
++F EL+ T++F+ G VY+G + VA+KK+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 382 -DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND-KGGKFLDWAQ 439
+IK++ K H +L+ LLG +G + LVY NGSL ++ G L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
R +IA A G+N+LH H+H+DIK +N+LLD F AKI++F LAR +E+ +
Sbjct: 135 RCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKF-AQTV 190
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
+ IVGT YMAPE L G ++ K D+Y+FGV++LE+++G A + E +LL
Sbjct: 191 MXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
++ E+ + M+ + + V A+ + CL + + RP + K+ Q
Sbjct: 250 IEDEEKTIEDYIDKKMNDA---DSTSVEAMYSV--ASQCLHEKKNKRPDIKKVQQ 299
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 125/235 (53%), Gaps = 27/235 (11%)
Query: 342 YTFEELQAATDDFNPSCWIKGS----------VYRGKIGGDFVAIKKVYG---------- 381
++F EL+ T++F+ G VY+G + VA+KK+
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 382 -DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND-KGGKFLDWAQ 439
+IK++ K H +L+ LLG +G + LVY NGSL ++ G L W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
R +IA A G+N+LH H+H+DIK +N+LLD F AKI++F LAR +E+ +
Sbjct: 129 RCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKF-AQXV 184
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
+ IVGT YMAPE L G ++ K D+Y+FGV++LE+++G A + E +LL
Sbjct: 185 MXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 123/235 (52%), Gaps = 27/235 (11%)
Query: 342 YTFEELQAATDDFNPSCWIKGS----------VYRGKIGGDFVAIKKVYG---------- 381
++F EL+ T++F+ G VY+G + VA+KK+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 382 -DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND-KGGKFLDWAQ 439
+IK+ K H +L+ LLG +G + LVY NGSL ++ G L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
R +IA A G+N+LH H+H+DIK +N+LLD F AKI++F LAR +E+ +
Sbjct: 126 RCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKF-AQXV 181
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
S IVGT Y APE L G ++ K D+Y+FGV++LE+++G A + E +LL
Sbjct: 182 XXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 150/317 (47%), Gaps = 56/317 (17%)
Query: 331 SISDIAQSLKVYTFE-------ELQAATDDFNPSCWIK----GSVYRGKI-GGDFVAIKK 378
SI+D S + FE +L+ AT++F+ I G VY+G + G VA+K+
Sbjct: 11 SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR 70
Query: 379 VYGDASD-------QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLS--VWIND 429
++S +I+ L+ H L+ L+G C L+Y+ NG+L ++ +D
Sbjct: 71 RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130
Query: 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
+ W QR++I + A GL+YLH+ +H+D+K N+LLD +F KI +F +++
Sbjct: 131 LPTMSMSWEQRLEICIGAARGLHYLHTRAI---IHRDVKSINILLDENFVPKITDFGISK 187
Query: 490 PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP----- 544
+ G+ L + GT GY+ PEY G ++ K DVY+FGV++ E+L + A
Sbjct: 188 KGT-ELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
Query: 545 ---------ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLI 595
A+ S N L +++P L + ESLR D +++
Sbjct: 247 REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVK--------------- 291
Query: 596 ESCLKKDPSGRPAMDKI 612
CL RP+M +
Sbjct: 292 --CLALSSEDRPSMGDV 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 56/317 (17%)
Query: 331 SISDIAQSLKVYTFE-------ELQAATDDFNPSCWIK----GSVYRGKI-GGDFVAIKK 378
SI+D S + FE +L+ AT++F+ I G VY+G + G VA+K+
Sbjct: 11 SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR 70
Query: 379 VYGDASD-------QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLS--VWIND 429
++S +I+ L+ H L+ L+G C L+Y+ NG+L ++ +D
Sbjct: 71 RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130
Query: 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
+ W QR++I + A GL+YLH+ +H+D+K N+LLD +F KI +F +++
Sbjct: 131 LPTMSMSWEQRLEICIGAARGLHYLHTRAI---IHRDVKSINILLDENFVPKITDFGISK 187
Query: 490 PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP----- 544
+ + L + GT GY+ PEY G ++ K DVY+FGV++ E+L + A
Sbjct: 188 KGTELD-QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
Query: 545 ---------ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLI 595
A+ S N L +++P L + ESLR D +++
Sbjct: 247 REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVK--------------- 291
Query: 596 ESCLKKDPSGRPAMDKI 612
CL RP+M +
Sbjct: 292 --CLALSSEDRPSMGDV 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 32/273 (11%)
Query: 362 GSVYRGKIGGDFVAIK---------KVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+V+R + G VA+K + + ++ ++ ++ H +++ +G N
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 413 LVYENAVNGSLSVWINDKGGKF-LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
+V E GSL ++ G + LD +R+ +A DVA G+NYLH+ NPP VH+D+K N
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRDLKSPN 169
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFG 531
+L+D + K+ +F L+R + F + GT +MAPE L + + K DVY+FG
Sbjct: 170 LLVDKKYTVKVCDFGLSR---LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 532 VLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591
V++ E+ + ++ N+ V+ V K E R+L P V AI
Sbjct: 227 VILWELATLQQPWG-----NLNPAQVVAAVGFKCKRLEIPRNL--------NPQVAAI-- 271
Query: 592 IRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624
IE C +P RP+ I + + +++
Sbjct: 272 ---IEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 32/273 (11%)
Query: 362 GSVYRGKIGGDFVAIK---------KVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+V+R + G VA+K + + ++ ++ ++ H +++ +G N
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 413 LVYENAVNGSLSVWINDKGGKF-LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
+V E GSL ++ G + LD +R+ +A DVA G+NYLH+ NPP VH+++K N
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPN 169
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFG 531
+L+D + K+ +F L+R + F + GT +MAPE L + + K DVY+FG
Sbjct: 170 LLVDKKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 532 VLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591
V++ E+ + ++ N+ V+ V K E R+L P V AI
Sbjct: 227 VILWELATLQQPWG-----NLNPAQVVAAVGFKCKRLEIPRNL--------NPQVAAI-- 271
Query: 592 IRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624
IE C +P RP+ I + + +++
Sbjct: 272 ---IEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 93/199 (46%), Gaps = 27/199 (13%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASDQI-----------KLLNKINHSSLIRLLGICFNGGN 410
G VYR GD VA+K D + I KL + H ++I L G+C N
Sbjct: 21 GKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
LV E A G L+ ++ GK + + A+ +A G+NYLH P +H+D+K S
Sbjct: 81 LCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 471 NVLLDTDFR--------AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVS 522
N+L+ KI +F LAR R A G +MAPE + + S
Sbjct: 138 NILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-----AGAYAWMAPEVIRASMFS 192
Query: 523 TKLDVYAFGVLMLEMLSGK 541
DV+++GVL+ E+L+G+
Sbjct: 193 KGSDVWSYGVLLWELLTGE 211
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 135/281 (48%), Gaps = 49/281 (17%)
Query: 362 GSVYRGKIGGD--FVAIKK-VYGDASDQIKLLNK-------------INHSSLIRLLGIC 405
G V++G++ D VAIK + GD+ + +++ K +NH ++++L G+
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM 92
Query: 406 FNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHK 465
N +V E G L + DK + W+ ++++ LD+A G+ Y+ + NPP VH+
Sbjct: 93 HNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQN-QNPPIVHR 148
Query: 466 DIKCSNVLL-----DTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL--EN 518
D++ N+ L + AK+A+F+L++ + S ++G +MAPE + E
Sbjct: 149 DLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS------VSGLLGNFQWMAPETIGAEE 202
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
+ K D Y+F +++ +L+G+ YS + ++++ EE LR P+
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--------EEGLR----PT 250
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619
+ + PP + +IE C DP RP I + +S
Sbjct: 251 IPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 134/281 (47%), Gaps = 49/281 (17%)
Query: 362 GSVYRGKIGGD--FVAIKK-VYGDASDQIKLLNK-------------INHSSLIRLLGIC 405
G V++G++ D VAIK + GD+ + +++ K +NH ++++L G+
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM 92
Query: 406 FNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHK 465
N +V E G L + DK + W+ ++++ LD+A G+ Y+ + NPP VH+
Sbjct: 93 HNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQN-QNPPIVHR 148
Query: 466 DIKCSNVLL-----DTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL--EN 518
D++ N+ L + AK+A+F L++ + S ++G +MAPE + E
Sbjct: 149 DLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS------VSGLLGNFQWMAPETIGAEE 202
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
+ K D Y+F +++ +L+G+ YS + ++++ EE LR P+
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--------EEGLR----PT 250
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619
+ + PP + +IE C DP RP I + +S
Sbjct: 251 IPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 31/228 (13%)
Query: 339 LKVYTFEELQAATDDFNPSCWIK----------------GSVYRGKIGGDFVAIKKVYGD 382
+K E AA D+F S W G V G G+ VA+K + D
Sbjct: 168 IKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND 227
Query: 383 ASDQIKL-----LNKINHSSLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A+ Q L + ++ HS+L++LLG+ G Y+V E GSL ++ +G L
Sbjct: 228 ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG 287
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
++ +LDV + YL VH+D+ NVL+ D AK+++F L + A +
Sbjct: 288 GDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 344
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
L + APE L STK DV++FG+L+ E+ S P
Sbjct: 345 TGKLPVK------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 44/273 (16%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASD-----QIKLLNKINHSSLIRLLGICFNGGNWYLVYE 416
G V + K VAIK++ ++ +++ L+++NH ++++L G C N LV E
Sbjct: 23 GVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVC--LVME 80
Query: 417 NAVNGSL-SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD 475
A GSL +V + + A + L + G+ YLHS +H+D+K N+LL
Sbjct: 81 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV 140
Query: 476 TDFRA-KIANFALARPAERQEGEFALTSHIVGTKG---YMAPEYLENGLVSTKLDVYAFG 531
KI +F A + +H+ KG +MAPE E S K DV+++G
Sbjct: 141 AGGTVLKICDFGTA---------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG 191
Query: 532 VLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL- 590
+++ E+++ ++ E G + R +M G PP+ L
Sbjct: 192 IILWEVITRRKP-------------------FDEIGGPAFR-IMWAVHNGTRPPLIKNLP 231
Query: 591 --VIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621
+ L+ C KDPS RP+M++I + ++ +
Sbjct: 232 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 15/189 (7%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASDQIKL-----LNKINHSSLIRLLGICFN-GGNWYLVY 415
G V G G+ VA+K + DA+ Q L + ++ HS+L++LLG+ G Y+V
Sbjct: 26 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 85
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD 475
E GSL ++ +G L ++ +LDV + YL VH+D+ NVL+
Sbjct: 86 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVS 142
Query: 476 TDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLML 535
D AK+++F L + A + L + APE L STK DV++FG+L+
Sbjct: 143 EDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREAAFSTKSDVWSFGILLW 196
Query: 536 EMLSGKEAP 544
E+ S P
Sbjct: 197 EIYSFGRVP 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 44/273 (16%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASD-----QIKLLNKINHSSLIRLLGICFNGGNWYLVYE 416
G V + K VAIK++ ++ +++ L+++NH ++++L G C N LV E
Sbjct: 22 GVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVC--LVME 79
Query: 417 NAVNGSL-SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD 475
A GSL +V + + A + L + G+ YLHS +H+D+K N+LL
Sbjct: 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV 139
Query: 476 TDFRA-KIANFALARPAERQEGEFALTSHIVGTKG---YMAPEYLENGLVSTKLDVYAFG 531
KI +F A + +H+ KG +MAPE E S K DV+++G
Sbjct: 140 AGGTVLKICDFGTA---------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG 190
Query: 532 VLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL- 590
+++ E+++ ++ E G + R +M G PP+ L
Sbjct: 191 IILWEVITRRKP-------------------FDEIGGPAFR-IMWAVHNGTRPPLIKNLP 230
Query: 591 --VIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621
+ L+ C KDPS RP+M++I + ++ +
Sbjct: 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 15/189 (7%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASDQIKL-----LNKINHSSLIRLLGICFN-GGNWYLVY 415
G V G G+ VA+K + DA+ Q L + ++ HS+L++LLG+ G Y+V
Sbjct: 20 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD 475
E GSL ++ +G L ++ +LDV + YL VH+D+ NVL+
Sbjct: 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVS 136
Query: 476 TDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLML 535
D AK+++F L + A + L + APE L STK DV++FG+L+
Sbjct: 137 EDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGILLW 190
Query: 536 EMLSGKEAP 544
E+ S P
Sbjct: 191 EIYSFGRVP 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 99/218 (45%), Gaps = 31/218 (14%)
Query: 349 AATDDFNPSCWIK----------------GSVYRGKIGGDFVAIKKVYGDASDQIKL--- 389
AA D+F S W G V G G+ VA+K + DA+ Q L
Sbjct: 6 AAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEA 65
Query: 390 --LNKINHSSLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALD 446
+ ++ HS+L++LLG+ G Y+V E GSL ++ +G L ++ +LD
Sbjct: 66 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 125
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
V + YL VH+D+ NVL+ D AK+++F L + A + L
Sbjct: 126 VCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK--- 179
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE L STK DV++FG+L+ E+ S P
Sbjct: 180 ---WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 133/281 (47%), Gaps = 49/281 (17%)
Query: 362 GSVYRGKIGGD--FVAIKK-VYGDASDQIKLLNK-------------INHSSLIRLLGIC 405
G V++G++ D VAIK + GD+ + +++ K +NH ++++L G+
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM 92
Query: 406 FNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHK 465
N +V E G L + DK + W+ ++++ LD+A G+ Y+ + NPP VH+
Sbjct: 93 HNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQN-QNPPIVHR 148
Query: 466 DIKCSNVLL-----DTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL--EN 518
D++ N+ L + AK+A+F ++ + S ++G +MAPE + E
Sbjct: 149 DLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS------VSGLLGNFQWMAPETIGAEE 202
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
+ K D Y+F +++ +L+G+ YS + ++++ EE LR P+
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--------EEGLR----PT 250
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619
+ + PP + +IE C DP RP I + +S
Sbjct: 251 IPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 45/270 (16%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDASD-----QIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V GK G + VA+K + G S+ + + + K++H L++ G+C Y+V
Sbjct: 22 GVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E NG L ++ G K L+ +Q +++ DV G+ +L S +H+D+ N L+
Sbjct: 82 TEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLV 137
Query: 475 DTDFRAKIANFALARPAERQEGEFALTSHIVGTKG------YMAPEYLENGLVSTKLDVY 528
D D K+++F + R + L V + G + APE S+K DV+
Sbjct: 138 DRDLCVKVSDFGMTR--------YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 529 AFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587
AFG+LM E+ S GK LY+ + VL G R P +
Sbjct: 190 AFGILMWEVFSLGKMPYDLYTNSEV--------VLKVSQGHRLYR-----------PHLA 230
Query: 588 AILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ + +++ SC + P RP ++ SI
Sbjct: 231 SDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 32/240 (13%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++K++ + H ++++ +G+ + + E G+L I ++ W+QR+ A
Sbjct: 57 EVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQY-PWSQRVSFAK 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR----PAERQEGEFALT 501
D+A+G+ YLHS +H+D+ N L+ + +A+F LAR + EG +L
Sbjct: 116 DIASGMAYLHSMNI---IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK 172
Query: 502 SH-------IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
+VG +MAPE + K+DV++FG+++ E++ A Y M
Sbjct: 173 KPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM-- 230
Query: 555 VDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
D ++R +D N PP + +R C DP RP+ K+
Sbjct: 231 -----------DFGLNVRGFLDRYCPPNCPPSFFPITVR----CCDLDPEKRPSFVKLEH 275
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ KI H L++L + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV-SEEPIYIV 90
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 91 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 147
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 148 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 199
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 200 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 241
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +KDP RP + + + + ++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 37/268 (13%)
Query: 362 GSVYRGKIGGD--FVAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNW 411
G V+ G++ D VA+K +K +L + +H +++RL+G+C
Sbjct: 128 GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 187
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
Y+V E G ++ +G + L +Q+ D A G+ YL S +H+D+ N
Sbjct: 188 YIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKCC---IHRDLAARN 243
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHI--VGTKGYMAPEYLENGLVSTKLDVYA 529
L+ KI++F ++R E +G +A + + V K + APE L G S++ DV++
Sbjct: 244 CLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVK-WTAPEALNYGRYSSESDVWS 300
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589
FG+L+ E S +P + + R ++ + P +
Sbjct: 301 FGILLWETFSLGASP------------------YPNLSNQQTREFVEKGGRLPCPELCPD 342
Query: 590 LVIRLIESCLKKDPSGRPAMDKIAQSIS 617
V RL+E C +P RP+ I Q +
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G+ S + +++ K+ H L++L + + Y+V
Sbjct: 199 GEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 257
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 258 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 314
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F L R E RQ +F + + APE G + K DV+
Sbjct: 315 GENLVCKVADFGLGRLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 366
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 367 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRMPC--------PPECP 408
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +KDP RP + + + + ++
Sbjct: 409 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 443
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 21 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 79
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 80 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 136
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 137 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 188
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 189 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 230
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +KDP RP + + + + ++
Sbjct: 231 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 265
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 23 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 81
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 82 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 138
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 139 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 190
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 191 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 232
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +KDP RP + + + + ++
Sbjct: 233 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 267
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 90
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 91 IEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 147
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 148 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 199
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 200 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 241
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +KDP RP + + + + ++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 90
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 91 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 147
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 148 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 199
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 200 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 241
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +KDP RP + + + + ++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 90
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 91 IEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 147
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 148 GENLVCKVADFGLARLIEDNEXTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 199
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 200 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 241
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +KDP RP + + + + ++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIV 90
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 91 CEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 147
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 148 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 199
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 200 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 241
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +KDP RP + + + + ++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 256
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 313
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 314 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 365
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 366 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRMPC--------PPECP 407
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +K+P RP + + + + ++
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ +++ K+ H L++L + + Y+V E GSL ++ + GK+L Q + +A
Sbjct: 312 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 370
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE------RQEGEFA 499
+A+G+ Y+ +VH+D++ +N+L+ + K+A+F LAR E RQ +F
Sbjct: 371 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 427
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
+ + APE G + K DV++FG+L+ E+ + P M+ +VL+
Sbjct: 428 IK--------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLD 475
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619
V E R PP + L+ C +K+P RP + + + +
Sbjct: 476 QV------ERGYRMPC--------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521
Query: 620 LNAS 623
++
Sbjct: 522 FTST 525
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 256
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 313
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 314 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 365
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 366 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRMPC--------PPECP 407
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +K+P RP + + + + ++
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G+ VAIK + G S ++ +++ K+ H L++L + + Y+V
Sbjct: 23 GEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVV-SEEPIYIV 81
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ D G+ L + +A VA G+ Y+ ++H+D++ +N+L+
Sbjct: 82 TEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILV 138
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
KIA+F LAR E RQ +F + + APE G + K DV+
Sbjct: 139 GNGLICKIADFGLARLIEDNEXTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 190
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+++ P Y N ++E E+ R P P
Sbjct: 191 SFGILLTELVTKGRVP--YPGMN-----------NREVLEQVERGYRMPC-----PQDCP 232
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
I + L+ C KKDP RP + + + + A+
Sbjct: 233 ISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTAT 267
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 256
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 257 GEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 313
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 314 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 365
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 366 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRMPC--------PPECP 407
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +K+P RP + + + + ++
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 25 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 83
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 84 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 140
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 141 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 192
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 193 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 234
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +K+P RP + + + + ++
Sbjct: 235 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 269
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 38/286 (13%)
Query: 362 GSVYRGKIGGDFVAIK------KVYGDASDQIKLLNKINHSSLIRLLGICFNGGNW---- 411
G V++ ++ DFVA+K K + +I + H +L++ + G N
Sbjct: 29 GCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVEL 88
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFT--------NPPHV 463
+L+ GSL+ ++ G + W + +A ++ GL+YLH P
Sbjct: 89 WLITAFHDKGSLTDYLK---GNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIA 145
Query: 464 HKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH-IVGTKGYMAPEYLENGL-- 520
H+D K NVLL +D A +A+F LA + G+ +H VGT+ YMAPE LE +
Sbjct: 146 HRDFKSKNVLLKSDLTAVLADFGLA--VRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINF 203
Query: 521 ---VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV---LNPVLHKEDGEESLRH- 573
++D+YA G+++ E++S +A +E ML + +P L E+ +E + H
Sbjct: 204 QRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSL--EELQEVVVHK 261
Query: 574 LMDPSMQGNY--PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
M P+++ ++ P A L + IE C D R + + + +S
Sbjct: 262 KMRPTIKDHWLKHPGLAQLCV-TIEECWDHDAEARLSAGCVEERVS 306
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 362 GSVYRGKIGGD--FVAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNW 411
G V+ G++ D VA+K +K +L + +H +++RL+G+C
Sbjct: 128 GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 187
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
Y+V E G ++ +G + L +Q+ D A G+ YL S +H+D+ N
Sbjct: 188 YIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKCC---IHRDLAARN 243
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHI--VGTKGYMAPEYLENGLVSTKLDVYA 529
L+ KI++F ++R E +G A + + V K + APE L G S++ DV++
Sbjct: 244 CLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVK-WTAPEALNYGRYSSESDVWS 300
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589
FG+L+ E S +P + + R ++ + P +
Sbjct: 301 FGILLWETFSLGASP------------------YPNLSNQQTREFVEKGGRLPCPELCPD 342
Query: 590 LVIRLIESCLKKDPSGRPAMDKIAQSIS 617
V RL+E C +P RP+ I Q +
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 90
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D+ +N+L+
Sbjct: 91 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLAAANILV 147
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 148 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 199
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 200 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 241
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +KDP RP + + + + ++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 123/275 (44%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIV 90
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E G L ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 91 MEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 147
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 148 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 199
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 200 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 241
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +KDP RP + + + + ++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 118/273 (43%), Gaps = 49/273 (17%)
Query: 366 RGKIGGDFVAIKKVYGDASD---------QIKLLNKINHSSLIRLLGICFNGGNWYLVYE 416
R K G VAIKK D +IKLL ++ H +L+ LL +C WYLV+E
Sbjct: 45 RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104
Query: 417 ---NAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ + L ++ N LD+ + + G+ + HS +H+DIK N+L
Sbjct: 105 FVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCHSHNI---IHRDIKPENIL 156
Query: 474 LDTDFRAKIANFALAR----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTK-LDVY 528
+ K+ +F AR P E + E V T+ Y APE L + K +DV+
Sbjct: 157 VSQSGVVKLCDFGFARTLAAPGEVYDDE-------VATRWYRAPELLVGDVKYGKAVDVW 209
Query: 529 AFGVLMLEMLSGK-------EAPALYSEENMLLVDVLNPVLHKE--DGEESLRHLMDPSM 579
A G L+ EM G+ + LY M+ + L P H+E + + P +
Sbjct: 210 AIGCLVTEMFMGEPLFPGDSDIDQLYH--IMMCLGNLIP-RHQELFNKNPVFAGVRLPEI 266
Query: 580 QGNYP-----PVTAILVIRLIESCLKKDPSGRP 607
+ P P + +VI L + CL DP RP
Sbjct: 267 KEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 123/275 (44%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIV 90
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E G L ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 91 TEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 147
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 148 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 199
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 200 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 241
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +KDP RP + + + + ++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 130/275 (47%), Gaps = 37/275 (13%)
Query: 362 GSVYRGKIGG-----DFVAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNG 408
G V RG++ VAIK + G +++ + ++ + H ++IRL G+ N
Sbjct: 28 GEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNS 87
Query: 409 GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIK 468
++ E NG+L ++ G+F Q + + +A+G+ YL + +VH+D+
Sbjct: 88 MPVMILTEFMENGALDSFLRLNDGQFTV-IQLVGMLRGIASGMRYLAEMS---YVHRDLA 143
Query: 469 CSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT--KGYMAPEYLENGLVSTKLD 526
N+L++++ K+++F L+R E + TS + G + APE + ++ D
Sbjct: 144 ARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASD 203
Query: 527 VYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586
+++G++M E++S E P +M DV+N + E+ R + P PP
Sbjct: 204 AWSYGIVMWEVMSFGERPYW----DMSNQDVINAI------EQDYR--LPP------PPD 245
Query: 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621
+ +L+ C +KD + RP ++ ++ + +
Sbjct: 246 CPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 280
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 24/249 (9%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ + +H ++IRL G+ G +V E NGSL ++ G+F Q + +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFT-IMQLVGMLR 158
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ-EGEFALTSHI 504
V G+ YL +VH+D+ NVL+D++ K+++F L+R E + + T
Sbjct: 159 GVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHK 564
+ + + APE + S+ DV++FGV+M E+L+ E P NM DV++ V
Sbjct: 216 IPIR-WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW----NMTNRDVISSV--- 267
Query: 565 EDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624
EE R P+ G + +L+ C KD + RP +I + + +
Sbjct: 268 ---EEGYRL---PAPMG-----CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
Query: 625 AWELSKNIS 633
+ + +S
Sbjct: 317 SLRATATVS 325
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 29 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 87
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + ++ +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 88 TEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLRAANILV 144
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 145 GENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 196
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 197 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 238
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +K+P RP + + + + ++
Sbjct: 239 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 273
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 41/271 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 22 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 79
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSI---IHRDLKSNNI 135
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + + S + DVYA
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 195 FGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------------VRSNCPK 240
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
RL+ CLKK RP +I SI
Sbjct: 241 AMK----RLMAECLKKKRDERPLFPQILASI 267
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 42/265 (15%)
Query: 372 DFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
D VAIK + D ++ +++ K++H L++L G+C LV+E +G LS
Sbjct: 32 DKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + G F + + LDV G+ YL +H+D+ N L+ + K+++F
Sbjct: 92 YLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDF 147
Query: 486 ALARPAERQEGEFALTSHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+ R F L + G + +PE S+K DV++FGVLM E+ S
Sbjct: 148 GMTR--------FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 540 GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
+ P EN +V+ ED R L P + + V +++ C
Sbjct: 200 EGKIPY----ENRSNSEVV------EDISTGFR-LYKPRLASTH-------VYQIMNHCW 241
Query: 600 KKDPSGRPAMDKIAQSISRFLNASL 624
K+ P RPA ++ + ++ + L
Sbjct: 242 KERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 41/272 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 22 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 79
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSI---IHRDLKSNNI 135
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + + S + DVYA
Sbjct: 136 FLHEDLTVKIGDFGLATEKSRWSGSHQF-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 195 FGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------------VRSNCPK 240
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
RL+ CLKK RP +I SI
Sbjct: 241 AMK----RLMAECLKKKRDERPLFPQILASIE 268
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + Y+V
Sbjct: 29 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 87
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + ++ +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 88 TEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLRAANILV 144
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 145 GENLVCKVADFGLARLIEDNEWTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 196
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 197 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 238
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +K+P RP + + + + ++
Sbjct: 239 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 273
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 42/265 (15%)
Query: 372 DFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
D VAIK + D ++ +++ K++H L++L G+C LV+E +G LS
Sbjct: 30 DKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 89
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + G F + + LDV G+ YL +H+D+ N L+ + K+++F
Sbjct: 90 YLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDF 145
Query: 486 ALARPAERQEGEFALTSHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+ R F L + G + +PE S+K DV++FGVLM E+ S
Sbjct: 146 GMTR--------FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
Query: 540 GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
+ P EN +V+ ED R L P + + V +++ C
Sbjct: 198 EGKIPY----ENRSNSEVV------EDISTGFR-LYKPRLASTH-------VYQIMNHCW 239
Query: 600 KKDPSGRPAMDKIAQSISRFLNASL 624
K+ P RPA ++ + ++ + L
Sbjct: 240 KERPEDRPAFSRLLRQLAEIAESGL 264
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 130/275 (47%), Gaps = 37/275 (13%)
Query: 362 GSVYRGKIGG-----DFVAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNG 408
G V RG++ VAIK + G +++ + ++ + H ++IRL G+ N
Sbjct: 30 GEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNS 89
Query: 409 GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIK 468
++ E NG+L ++ G+F Q + + +A+G+ YL + +VH+D+
Sbjct: 90 MPVMILTEFMENGALDSFLRLNDGQFTV-IQLVGMLRGIASGMRYLAEMS---YVHRDLA 145
Query: 469 CSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT--KGYMAPEYLENGLVSTKLD 526
N+L++++ K+++F L+R E + TS + G + APE + ++ D
Sbjct: 146 ARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASD 205
Query: 527 VYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586
+++G++M E++S E P +M DV+N + E+ R + P PP
Sbjct: 206 AWSYGIVMWEVMSFGERPYW----DMSNQDVINAI------EQDYR--LPP------PPD 247
Query: 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621
+ +L+ C +KD + RP ++ ++ + +
Sbjct: 248 CPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 282
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 370 GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICF-NGGNWY-LVYENAVNGSLSVWI 427
GG+ +A D +I++L + H ++++ GIC +GGN L+ E +GSL ++
Sbjct: 51 GGNHIA------DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 104
Query: 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFAL 487
K ++ Q+++ A+ + G++YL S +VH+D+ NVL++++ + KI +F L
Sbjct: 105 PKNKNK-INLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGL 160
Query: 488 ARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALY 547
+ E + + + APE L DV++FGV + E+L+ ++
Sbjct: 161 TKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSD--- 217
Query: 548 SEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNY---PPVTAILVIRLIESCLKKDPS 604
S L + ++ P G+ ++ L++ +G PP V +L+ C + PS
Sbjct: 218 SSPMALFLKMIGPT----HGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPS 273
Query: 605 GRPAMDKIAQSISRFL 620
R + + + L
Sbjct: 274 NRTSFQNLIEGFEALL 289
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 22/248 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ + +H ++IRL G+ G +V E NGSL ++ G+F Q + +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFT-IMQLVGMLR 158
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
V G+ YL +VH+D+ NVL+D++ K+++F L+R E T+
Sbjct: 159 GVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE 565
+ APE + S+ DV++FGV+M E+L+ E P NM DV++ V
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW----NMTNRDVISSV---- 267
Query: 566 DGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLA 625
EE R P+ G + +L+ C KD + RP +I + + + +
Sbjct: 268 --EEGYRL---PAPMG-----CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317
Query: 626 WELSKNIS 633
+ +S
Sbjct: 318 LRATATVS 325
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 41/271 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 24 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 81
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 82 IVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSI---IHRDLKSNNI 137
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + + S + DVYA
Sbjct: 138 FLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 196
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 197 FGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------------VRSNCPK 242
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
RL+ CLKK RP +I SI
Sbjct: 243 AMK----RLMAECLKKKRDERPLFPQILASI 269
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 42/265 (15%)
Query: 372 DFVAIKKVY------GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
D VAIK + D ++ +++ K++H L++L G+C LV+E +G LS
Sbjct: 52 DKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 111
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + G F + + LDV G+ YL +H+D+ N L+ + K+++F
Sbjct: 112 YLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDF 167
Query: 486 ALARPAERQEGEFALTSHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+ R F L + G + +PE S+K DV++FGVLM E+ S
Sbjct: 168 GMTR--------FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
Query: 540 GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
+ P EN +V+ ED R L P + + V +++ C
Sbjct: 220 EGKIPY----ENRSNSEVV------EDISTGFR-LYKPRLASTH-------VYQIMNHCW 261
Query: 600 KKDPSGRPAMDKIAQSISRFLNASL 624
K+ P RPA ++ + ++ + L
Sbjct: 262 KERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 41/271 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 22 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 79
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSI---IHRDLKSNNI 135
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + + S + DVYA
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 195 FGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------------VRSNCPK 240
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
RL+ CLKK RP +I SI
Sbjct: 241 AMK----RLMAECLKKKRDERPLFPQILASI 267
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 42/258 (16%)
Query: 372 DFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
D VAIK + D ++ +++ K++H L++L G+C LV+E +G LS
Sbjct: 32 DKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + G F + + LDV G+ YL + +H+D+ N L+ + K+++F
Sbjct: 92 YLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEASV---IHRDLAARNCLVGENQVIKVSDF 147
Query: 486 ALARPAERQEGEFALTSHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+ R F L + G + +PE S+K DV++FGVLM E+ S
Sbjct: 148 GMTR--------FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 540 GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
+ P EN +V+ ED R L P + + V +++ C
Sbjct: 200 EGKIPY----ENRSNSEVV------EDISTGFR-LYKPRLASTH-------VYQIMNHCW 241
Query: 600 KKDPSGRPAMDKIAQSIS 617
K+ P RPA ++ + ++
Sbjct: 242 KERPEDRPAFSRLLRQLA 259
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 121/257 (47%), Gaps = 22/257 (8%)
Query: 370 GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICF-NGGNWY-LVYENAVNGSLSVWI 427
GG+ +A D +I++L + H ++++ GIC +GGN L+ E +GSL ++
Sbjct: 63 GGNHIA------DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 116
Query: 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFAL 487
K ++ Q+++ A+ + G++YL S +VH+D+ NVL++++ + KI +F L
Sbjct: 117 PKNKNK-INLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGL 172
Query: 488 ARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALY 547
+ E + + + APE L DV++FGV + E+L+ ++
Sbjct: 173 TKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSD--- 229
Query: 548 SEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNY---PPVTAILVIRLIESCLKKDPS 604
S L + ++ P G+ ++ L++ +G PP V +L+ C + PS
Sbjct: 230 SSPMALFLKMIGPT----HGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPS 285
Query: 605 GRPAMDKIAQSISRFLN 621
R + + + L
Sbjct: 286 NRTSFQNLIEGFEALLK 302
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 41/271 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 27 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 84
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSI---IHRDLKSNNI 140
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + + S + DVYA
Sbjct: 141 FLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 199
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 200 FGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------------VRSNCPK 245
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
RL+ CLKK RP +I SI
Sbjct: 246 AMK----RLMAECLKKKRDERPLFPQILASI 272
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 41/271 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 42 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 99
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 100 IVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSI---IHRDLKSNNI 155
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + + S + DVYA
Sbjct: 156 FLHEDLTVKIGDFGLATEKSRWSGSHQF-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 214
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 215 FGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------------VRSNCPK 260
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
RL+ CLKK RP +I SI
Sbjct: 261 AMK----RLMAECLKKKRDERPLFPQILASI 287
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 131/284 (46%), Gaps = 46/284 (16%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 38 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 95
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 96 IVTQWCEGSSLYHHLHASETKF-EMKKLIDIARQTARGMDYLHAKSI---IHRDLKSNNI 151
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + ++ S + DVYA
Sbjct: 152 FLHEDNTVKIGDFGLATEKSRWSGSHQF-EQLSGSILWMAPEVIRMQDSNPYSFQSDVYA 210
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 211 FGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK--------------VRSNCPK 256
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWELS 629
+ RL+ CLKK RP+ +I I LA ELS
Sbjct: 257 ----RMKRLMAECLKKKRDERPSFPRILAEIE-----ELARELS 291
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 41/271 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 27 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 84
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSI---IHRDLKSNNI 140
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + + S + DVYA
Sbjct: 141 FLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 199
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 200 FGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------------VRSNCPK 245
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
RL+ CLKK RP +I SI
Sbjct: 246 AMK----RLMAECLKKKRDERPLFPQILASI 272
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 41/271 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 50 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 107
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSI---IHRDLKSNNI 163
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + + S + DVYA
Sbjct: 164 FLHEDLTVKIGDFGLATEKSRWSGSHQF-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 222
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 223 FGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------------VRSNCPK 268
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
RL+ CLKK RP +I SI
Sbjct: 269 AMK----RLMAECLKKKRDERPLFPQILASI 295
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 26 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 83
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 84 IVTQWCEGSSLYHHLHASETKF-EMKKLIDIARQTARGMDYLHAKSI---IHRDLKSNNI 139
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + ++ S + DVYA
Sbjct: 140 FLHEDNTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMAPEVIRMQDSNPYSFQSDVYA 198
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 199 FGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK--------------VRSNCPK 244
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWELS 629
RL+ CLKK RP+ +I I LA ELS
Sbjct: 245 RMK----RLMAECLKKKRDERPSFPRILAEIE-----ELARELS 279
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 42/265 (15%)
Query: 372 DFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
D VAIK + D ++ +++ K++H L++L G+C LV+E +G LS
Sbjct: 35 DKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + G F + + LDV G+ YL +H+D+ N L+ + K+++F
Sbjct: 95 YLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDF 150
Query: 486 ALARPAERQEGEFALTSHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+ R F L + G + +PE S+K DV++FGVLM E+ S
Sbjct: 151 GMTR--------FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
Query: 540 GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
+ P EN +V+ ED R L P + + V +++ C
Sbjct: 203 EGKIPY----ENRSNSEVV------EDISTGFR-LYKPRLASTH-------VYQIMNHCW 244
Query: 600 KKDPSGRPAMDKIAQSISRFLNASL 624
++ P RPA ++ + ++ + L
Sbjct: 245 RERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 41/271 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 49 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 106
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 107 IVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSI---IHRDLKSNNI 162
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + + S + DVYA
Sbjct: 163 FLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 221
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 222 FGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------------VRSNCPK 267
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
RL+ CLKK RP +I SI
Sbjct: 268 AMK----RLMAECLKKKRDERPLFPQILASI 294
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 41/274 (14%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 38 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 95
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 96 IVTQWCEGSSLYHHLHASETKF-EMKKLIDIARQTARGMDYLHAKSI---IHRDLKSNNI 151
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + ++ S + DVYA
Sbjct: 152 FLHEDNTVKIGDFGLATEKSRWSGSHQF-EQLSGSILWMAPEVIRMQDSNPYSFQSDVYA 210
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 211 FGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK--------------VRSNCPK 256
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619
+ RL+ CLKK RP+ +I I
Sbjct: 257 ----RMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 123/275 (44%), Gaps = 43/275 (15%)
Query: 362 GSVYRGKIGGD-FVAIKKVY-GDAS-----DQIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V+ G G VAIK + G S + +++ K+ H L++L + + +V
Sbjct: 22 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIXIV 80
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GSL ++ + GK+L Q + +A +A+G+ Y+ +VH+D++ +N+L+
Sbjct: 81 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILV 137
Query: 475 DTDFRAKIANFALARPAE------RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+ K+A+F LAR E RQ +F + + APE G + K DV+
Sbjct: 138 GENLVCKVADFGLARLIEDNEXTARQGAKFPIK--------WTAPEAALYGRFTIKSDVW 189
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+FG+L+ E+ + P M+ +VL+ V E R PP
Sbjct: 190 SFGILLTELTTKGRVPY----PGMVNREVLDQV------ERGYRM--------PCPPECP 231
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ L+ C +K+P RP + + + + ++
Sbjct: 232 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 266
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 37/184 (20%)
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494
LD Q I ++ GL+YLHS +H+DIK +NVLL K+A+F +A
Sbjct: 116 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA------ 166
Query: 495 EGEFALT----SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP--ALYS 548
G+ T + VGT +MAPE ++ +K D+++ G+ +E+ G E P L+
Sbjct: 167 -GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG-EPPHSELHP 224
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ + L+ NP P+++GNY + + +E+CL K+PS RP
Sbjct: 225 MKVLFLIPKNNP----------------PTLEGNY----SKPLKEFVEACLNKEPSFRPT 264
Query: 609 MDKI 612
++
Sbjct: 265 AKEL 268
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 37/184 (20%)
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494
LD Q I ++ GL+YLHS +H+DIK +NVLL K+A+F +A
Sbjct: 101 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA------ 151
Query: 495 EGEFALT----SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP--ALYS 548
G+ T + VGT +MAPE ++ +K D+++ G+ +E+ G E P L+
Sbjct: 152 -GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG-EPPHSELHP 209
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ + L+ NP P+++GNY + + +E+CL K+PS RP
Sbjct: 210 MKVLFLIPKNNP----------------PTLEGNY----SKPLKEFVEACLNKEPSFRPT 249
Query: 609 MDKI 612
++
Sbjct: 250 AKEL 253
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 41/271 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWY 412
G+VY+GK GD VA+K + A +++ +L K H +++ +G
Sbjct: 50 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 107
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V + SL ++ KF + + I IA A G++YLH+ + +H+D+K +N+
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSI---IHRDLKSNNI 163
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYA 529
L D KI +F LA R G + G+ +MAPE + + S + DVYA
Sbjct: 164 FLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 222
Query: 530 FGVLMLEMLSGKEAPALYSEENMLLVDV----LNPVLHKEDGEESLRHLMDPSMQGNYPP 585
FG+++ E+++G+ + + + ++ V L+P L K ++ N P
Sbjct: 223 FGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------------VRSNCPK 268
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
RL+ CLKK RP +I SI
Sbjct: 269 AMK----RLMAECLKKKRDERPLFPQILASI 295
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 37/184 (20%)
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494
LD Q I ++ GL+YLHS +H+DIK +NVLL K+A+F +A
Sbjct: 101 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA------ 151
Query: 495 EGEFALT----SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP--ALYS 548
G+ T + VGT +MAPE ++ +K D+++ G+ +E+ G E P L+
Sbjct: 152 -GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG-EPPHSELHP 209
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ + L+ NP P+++GNY + + +E+CL K+PS RP
Sbjct: 210 MKVLFLIPKNNP----------------PTLEGNY----SKPLKEFVEACLNKEPSFRPT 249
Query: 609 MDKI 612
++
Sbjct: 250 AKEL 253
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 32/258 (12%)
Query: 373 FVAIK--------KVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
FVAIK K D + ++ + +H ++I L G+ ++ E NGSL
Sbjct: 63 FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIAN 484
++ G+F Q + + +A G+ YL +VH+D+ N+L++++ K+++
Sbjct: 123 SFLRQNDGQFT-VIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSD 178
Query: 485 FALARPAERQEGEFALTSHIVGT--KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKE 542
F L+R E + TS + G + APE ++ ++ DV+++G++M E++S E
Sbjct: 179 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
Query: 543 APALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKD 602
P +M DV+N + E+ R + P M + +L+ C +KD
Sbjct: 239 RPYW----DMTNQDVINAI------EQDYR--LPPPMD------CPSALHQLMLDCWQKD 280
Query: 603 PSGRPAMDKIAQSISRFL 620
+ RP +I ++ + +
Sbjct: 281 RNHRPKFGQIVNTLDKMI 298
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 37/195 (18%)
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494
LD Q I ++ GL+YLHS +H+DIK +NVLL K+A+F +A
Sbjct: 121 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA------ 171
Query: 495 EGEFALT----SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP--ALYS 548
G+ T + VGT +MAPE ++ +K D+++ G+ +E+ G E P L+
Sbjct: 172 -GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG-EPPHSELHP 229
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ + L+ NP P+++GNY + + +E+CL K+PS RP
Sbjct: 230 MKVLFLIPKNNP----------------PTLEGNY----SKPLKEFVEACLNKEPSFRPT 269
Query: 609 MDKIAQSISRFLNAS 623
++ + NA
Sbjct: 270 AKELLKHKFILRNAK 284
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 55/275 (20%)
Query: 374 VAIKKVYGDASDQ-----------IKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGS 422
VA+K + DA+++ +K++ K H ++I LLG C G Y++ E A G+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 423 LSVWINDKGGKFLDWA--------------QRIQIALDVATGLNYLHSFTNPPHVHKDIK 468
L ++ + L+++ + A VA G+ YL S +H+D+
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLA 177
Query: 469 CSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
NVL+ D KIA+F LAR + T+ + K +MAPE L + + + + DV+
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVK-WMAPEALFDRIYTHQSDVW 236
Query: 529 AFGVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD-PSMQGNYPP 585
+FGVL+ E+ L G P + EE L+ ++G H MD PS N
Sbjct: 237 SFGVLLWEIFTLGGSPYPGVPVEELFKLL---------KEG-----HRMDKPSNCTNE-- 280
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R +
Sbjct: 281 -----LYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 55/275 (20%)
Query: 374 VAIKKVYGDASDQ-----------IKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGS 422
VA+K + DA+++ +K++ K H ++I LLG C G Y++ E A G+
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 161
Query: 423 LSVWINDKGGKFLDWAQR--------------IQIALDVATGLNYLHSFTNPPHVHKDIK 468
L ++ + L+++ + A VA G+ YL S +H+D+
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLA 218
Query: 469 CSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
NVL+ D KIA+F LAR + T+ + K +MAPE L + + + + DV+
Sbjct: 219 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVW 277
Query: 529 AFGVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD-PSMQGNYPP 585
+FGVL+ E+ L G P + EE L+ KE H MD PS N
Sbjct: 278 SFGVLLWEIFTLGGSPYPGVPVEELFKLL--------KEG------HRMDKPSNCTNE-- 321
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R +
Sbjct: 322 -----LYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 51/273 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 425 VWINDKGGKFLDWAQR--------------IQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + L+++ + A VA G+ YL S +H+D+
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAAR 168
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ D KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 169 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSF 227
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD-PSMQGNYPPVT 587
GVL+ E+ L G P + EE L+ ++G H MD PS N
Sbjct: 228 GVLLWEIFTLGGSPYPGVPVEELFKLL---------KEG-----HRMDKPSNCTNE---- 269
Query: 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R +
Sbjct: 270 ---LYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 299
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 55/275 (20%)
Query: 374 VAIKKVYGDASDQ-----------IKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGS 422
VA+K + DA+++ +K++ K H ++I LLG C G Y++ E A G+
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 112
Query: 423 LSVWINDKGGKFLDWAQR--------------IQIALDVATGLNYLHSFTNPPHVHKDIK 468
L ++ + L+++ + A VA G+ YL S +H+D+
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLA 169
Query: 469 CSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
NVL+ D KIA+F LAR + T+ + K +MAPE L + + + + DV+
Sbjct: 170 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVW 228
Query: 529 AFGVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD-PSMQGNYPP 585
+FGVL+ E+ L G P + EE L+ ++G H MD PS N
Sbjct: 229 SFGVLLWEIFTLGGSPYPGVPVEELFKLL---------KEG-----HRMDKPSNCTNE-- 272
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R +
Sbjct: 273 -----LYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 302
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 55/275 (20%)
Query: 374 VAIKKVYGDASDQ-----------IKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGS 422
VA+K + DA+++ +K++ K H ++I LLG C G Y++ E A G+
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 113
Query: 423 LSVWINDKGGKFLDWAQR--------------IQIALDVATGLNYLHSFTNPPHVHKDIK 468
L ++ + L+++ + A VA G+ YL S +H+D+
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLA 170
Query: 469 CSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
NVL+ D KIA+F LAR + T+ + K +MAPE L + + + + DV+
Sbjct: 171 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVW 229
Query: 529 AFGVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD-PSMQGNYPP 585
+FGVL+ E+ L G P + EE L+ ++G H MD PS N
Sbjct: 230 SFGVLLWEIFTLGGSPYPGVPVEELFKLL---------KEG-----HRMDKPSNCTNE-- 273
Query: 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R +
Sbjct: 274 -----LYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 303
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 51/273 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 425 VWINDKGGKFLDWAQR--------------IQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + L+++ + A VA G+ YL S +H+D+
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAAR 179
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ D KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSF 238
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD-PSMQGNYPPVT 587
GVL+ E+ L G P + EE L+ ++G H MD PS N
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFKLL---------KEG-----HRMDKPSNCTNE---- 280
Query: 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R +
Sbjct: 281 ---LYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 51/273 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 425 VWINDKGGKFLDWAQR--------------IQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + L+++ + A VA G+ YL S +H+D+
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAAR 179
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ D KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSF 238
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD-PSMQGNYPPVT 587
GVL+ E+ L G P + EE L+ ++G H MD PS N
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFKLL---------KEG-----HRMDKPSNCTNE---- 280
Query: 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R +
Sbjct: 281 ---LYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 122/273 (44%), Gaps = 51/273 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 425 VWINDKGGKFLDWAQR--------------IQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + L++ + A VA G+ YL S +H+D+
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAAR 164
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ D KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSF 223
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD-PSMQGNYPPVT 587
GVL+ E+ L G P + EE L+ ++G H MD PS N
Sbjct: 224 GVLLWEIFTLGGSPYPGVPVEELFKLL---------KEG-----HRMDKPSNCTNE---- 265
Query: 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R +
Sbjct: 266 ---LYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 42/265 (15%)
Query: 372 DFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
D VAIK + D ++ +++ K++H L++L G+C LV E +G LS
Sbjct: 33 DKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + G F + + LDV G+ YL +H+D+ N L+ + K+++F
Sbjct: 93 YLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDF 148
Query: 486 ALARPAERQEGEFALTSHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+ R F L + G + +PE S+K DV++FGVLM E+ S
Sbjct: 149 GMTR--------FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
Query: 540 GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
+ P EN +V+ ED R L P + + V +++ C
Sbjct: 201 EGKIPY----ENRSNSEVV------EDISTGFR-LYKPRLASTH-------VYQIMNHCW 242
Query: 600 KKDPSGRPAMDKIAQSISRFLNASL 624
++ P RPA ++ + ++ + L
Sbjct: 243 RERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 35/286 (12%)
Query: 362 GSVYRGKIGGDFVAIK------KVYGDASDQIKLLNKINHSSLIRLLGICFNGG----NW 411
G V++ ++ ++VA+K K ++ L + H ++++ +G G +
Sbjct: 38 GCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFT-------NPPHVH 464
+L+ GSLS ++ + W + IA +A GL YLH P H
Sbjct: 98 WLITAFHEKGSLSDFLK---ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISH 154
Query: 465 KDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH-IVGTKGYMAPEYLENGL--- 520
+DIK NVLL + A IA+F LA E G+ A +H VGT+ YMAPE LE +
Sbjct: 155 RDIKSKNVLLKNNLTACIADFGLALKFE--AGKSAGDTHGQVGTRRYMAPEVLEGAINFQ 212
Query: 521 --VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV---LNPVLHKEDGEESLRHLM 575
++D+YA G+++ E+ S A +E ML + +P L ED +E + H
Sbjct: 213 RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL--EDMQEVVVHKK 270
Query: 576 DPSMQGNYPPVTA--ILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619
+ +Y A ++ IE C D R + + + I++
Sbjct: 271 KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 38/267 (14%)
Query: 375 AIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434
A++ G ++I +L+KI H +++ L I +GG+ YL+ + G L I +KG F
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--F 112
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL---LDTDFRAKIANFALARPA 491
++ V + YLH VH+D+K N+L LD D + I++F L+
Sbjct: 113 YTERDASRLIFQVLDAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN 551
+ E ++ S GT GY+APE L S +D ++ GV+ +L G P Y E +
Sbjct: 167 -KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFYDEND 223
Query: 552 MLLVDVLNPVLHKED----------GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKK 601
L + + ++ D ++ +RHLM+ + + A+ +
Sbjct: 224 AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL-----------Q 272
Query: 602 DP--SGRPAMDK-IAQSISRFLNASLA 625
P +G A+DK I QS+S + + A
Sbjct: 273 HPWIAGDTALDKNIHQSVSEQIKKNFA 299
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 14/187 (7%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASDQ-----IKLLNKINHSSLIRLLGICFNGGNWYLV 414
GSVY+ K G VAIK+V ++ Q I ++ + + +++ G F + ++V
Sbjct: 43 GSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E GS+S I + K L + I GL YLH +H+DIK N+LL
Sbjct: 103 MEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILL 158
Query: 475 DTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLM 534
+T+ AK+A+F +A + A + ++GT +MAPE ++ + D+++ G+
Sbjct: 159 NTEGHAKLADFGVAG---QLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITA 215
Query: 535 LEMLSGK 541
+EM GK
Sbjct: 216 IEMAEGK 222
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 37/255 (14%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
++ ++ +L + H ++++ G+ Y+V + G L IN + G Q +
Sbjct: 69 ESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQIL 128
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT 501
+ + L ++H + +H+DIK N+ L D ++ +F +AR L
Sbjct: 129 DWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN---STVELA 182
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPV 561
+GT Y++PE EN + K D++A G ++ E+ + K A S +N++L
Sbjct: 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL------- 235
Query: 562 LHKEDGEESLRHLMDPSMQGNYPPVT---AILVIRLIESCLKKDPSGRPAMDK------I 612
+ G++PPV+ + + L+ K++P RP+++ I
Sbjct: 236 ---------------KIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
Query: 613 AQSISRFLNASLAWE 627
A+ I +FL+ L E
Sbjct: 281 AKRIEKFLSPQLIAE 295
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 122/287 (42%), Gaps = 56/287 (19%)
Query: 366 RGKIGGDFVAIKKVYGDAS--------DQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
+G+ G VA+K + +AS + +L ++NH +I+L G C G L+ E
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 418 AVNGSLSVWIND--KGG--------------------KFLDWAQRIQIALDVATGLNYLH 455
A GSL ++ + K G + L I A ++ G+ YL
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Query: 456 SFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEY 515
+ VH+D+ N+L+ + KI++F L+R ++ + + K +MA E
Sbjct: 168 EMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK-WMAIES 223
Query: 516 LENGLVSTKLDVYAFGVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
L + + +T+ DV++FGVL+ E+ L G P + E L +
Sbjct: 224 LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--------------------LFN 263
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
L+ + P + + RL+ C K++P RP I++ + + +
Sbjct: 264 LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 122/273 (44%), Gaps = 51/273 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 425 VWINDKGGKFLDWAQR--------------IQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + L++ + A VA G+ YL S +H+D+
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAAR 179
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ D KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSF 238
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD-PSMQGNYPPVT 587
GVL+ E+ L G P + EE L+ ++G H MD PS N
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFKLL---------KEG-----HRMDKPSNCTNE---- 280
Query: 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R +
Sbjct: 281 ---LYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 38/267 (14%)
Query: 375 AIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434
A++ G ++I +L+KI H +++ L I +GG+ YL+ + G L I +KG F
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--F 112
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL---LDTDFRAKIANFALARPA 491
++ V + YLH VH+D+K N+L LD D + I++F L+
Sbjct: 113 YTERDASRLIFQVLDAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN 551
+ E ++ S GT GY+APE L S +D ++ GV+ +L G P Y E +
Sbjct: 167 -KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFYDEND 223
Query: 552 MLLVDVLNPVLHKED----------GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKK 601
L + + ++ D ++ +RHLM+ + + A+ +
Sbjct: 224 AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL-----------Q 272
Query: 602 DP--SGRPAMDK-IAQSISRFLNASLA 625
P +G A+DK I QS+S + + A
Sbjct: 273 HPWIAGDTALDKNIHQSVSEQIKKNFA 299
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 126/294 (42%), Gaps = 61/294 (20%)
Query: 362 GSVYRGK----IGGDF---VAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G I G+ VA+K V AS ++I+ LN+ ++RLLG+
Sbjct: 31 GMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 90
Query: 407 NGGNWYLVYENAVNGSLSVWI--------NDKGGKFLDWAQRIQIALDVATGLNYLHSFT 458
G +V E +G L ++ N+ G + IQ+A ++A G+ YL++
Sbjct: 91 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-- 148
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +MAP
Sbjct: 149 -KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI------YETAYYRKGGKGLLPVRWMAP 201
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T D+++FGV++ E+ S E P E+ L+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-----------------YQGLSNEQVLKF 244
Query: 574 LMDPSMQGNY---PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624
+MD G Y P V L+ C + +P RP +I + L+ S
Sbjct: 245 VMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 294
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 7/161 (4%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI-NDKGGKFLDWAQRIQI 443
++ L+ + H L+RL + Y++ E GSL ++ +D+GGK L + I
Sbjct: 57 EEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDF 115
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH 503
+ +A G+ Y+ ++H+D++ +NVL+ KIA+F LAR E + E+
Sbjct: 116 SAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIE--DNEYTAREG 170
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + G + K DV++FG+L+ E+++ + P
Sbjct: 171 AKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ ++++ ++R++GIC +W LV E A G L+ ++ + + I++
Sbjct: 420 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVH 476
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
V+ G+ YL VH+D+ NVLL T AKI++F L++ E + +H
Sbjct: 477 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + S+K DV++FGVLM E S + P
Sbjct: 534 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 38/267 (14%)
Query: 375 AIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434
A++ G ++I +L+KI H +++ L I +GG+ YL+ + G L I +KG F
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--F 112
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL---LDTDFRAKIANFALARPA 491
++ V + YLH VH+D+K N+L LD D + I++F L+
Sbjct: 113 YTERDASRLIFQVLDAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN 551
+ E ++ S GT GY+APE L S +D ++ GV+ +L G P Y E +
Sbjct: 167 -KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFYDEND 223
Query: 552 MLLVDVLNPVLHKED----------GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKK 601
L + + ++ D ++ +RHLM+ + + A+ +
Sbjct: 224 AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL-----------Q 272
Query: 602 DP--SGRPAMDK-IAQSISRFLNASLA 625
P +G A+DK I QS+S + + A
Sbjct: 273 HPWIAGDTALDKNIHQSVSEQIKKNFA 299
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 31/266 (11%)
Query: 362 GSVYRGKIGGDF-VAIKKVYGDASDQ-------IKLLNKINHSSLIRLLGICFNGGNWYL 413
G+VY+GK GD V I KV +Q + +L K H +++ +G N +
Sbjct: 50 GTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MTKDNLAI 108
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
V + SL ++ + KF Q I IA A G++YLH+ +H+D+K +N+
Sbjct: 109 VTQWCEGSSLYKHLHVQETKF-QMFQLIDIARQTAQGMDYLHAKNI---IHRDMKSNNIF 164
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGLVSTKLDVYAF 530
L KI +F LA R G G+ +MAPE + +N S + DVY++
Sbjct: 165 LHEGLTVKIGDFGLATVKSRWSGS-QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSY 223
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
G+++ E+++G E P + ++ ++ R P + Y +
Sbjct: 224 GIVLYELMTG-ELPYSHINNRDQIIFMVG------------RGYASPDLSKLYKNCPKAM 270
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI 616
RL+ C+KK RP +I SI
Sbjct: 271 K-RLVADCVKKVKEERPLFPQILSSI 295
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ ++++ ++R++GIC +W LV E A G L+ ++ + + I++
Sbjct: 421 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVH 477
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
V+ G+ YL VH+D+ NVLL T AKI++F L++ E + +H
Sbjct: 478 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 534
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + S+K DV++FGVLM E S + P
Sbjct: 535 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ ++++ ++R++GIC +W LV E A G L+ ++ + + + I++
Sbjct: 78 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 134
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
V+ G+ YL VH+D+ NVLL T AKI++F L++ E + +H
Sbjct: 135 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + S+K DV++FGVLM E S + P
Sbjct: 192 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ ++++ ++R++GIC +W LV E A G L+ ++ + + + I++
Sbjct: 78 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 134
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
V+ G+ YL VH+D+ NVLL T AKI++F L++ E + +H
Sbjct: 135 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + S+K DV++FGVLM E S + P
Sbjct: 192 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 126/294 (42%), Gaps = 61/294 (20%)
Query: 362 GSVYRGK----IGGDF---VAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G I G+ VA+K V AS ++I+ LN+ ++RLLG+
Sbjct: 31 GMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 90
Query: 407 NGGNWYLVYENAVNGSLSVWI--------NDKGGKFLDWAQRIQIALDVATGLNYLHSFT 458
G +V E +G L ++ N+ G + IQ+A ++A G+ YL++
Sbjct: 91 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-- 148
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +MAP
Sbjct: 149 -KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMAP 201
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T D+++FGV++ E+ S E P E+ L+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-----------------YQGLSNEQVLKF 244
Query: 574 LMDPSMQGNY---PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624
+MD G Y P V L+ C + +P RP +I + L+ S
Sbjct: 245 VMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 294
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 55/283 (19%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 39 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + + ++ IQ+A ++A G+ YL++
Sbjct: 99 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 158
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +M+P
Sbjct: 159 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 209
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T DV++FGV++ E+ + E P E+ LR
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRF 252
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+M+ + + P ++ L+ C + +P RP+ +I SI
Sbjct: 253 VMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ ++++ ++R++GIC +W LV E A G L+ ++ + + I++
Sbjct: 62 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVH 118
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
V+ G+ YL VH+D+ NVLL T AKI++F L++ E + +H
Sbjct: 119 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK 175
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + S+K DV++FGVLM E S + P
Sbjct: 176 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 129
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H+D++ +N+L+ KIA+F LAR E + E+
Sbjct: 130 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPI 184
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP--VLHKED 566
+ APE + G + K DV++FG+L+ E+++ P + NP + + E
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEVIQNLER 235
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
G +R P + +L+ C K+ P RP D + + F A+
Sbjct: 236 GYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 281
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ ++++ ++R++GIC +W LV E A G L+ ++ + + I++
Sbjct: 76 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVH 132
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
V+ G+ YL VH+D+ NVLL T AKI++F L++ E + +H
Sbjct: 133 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + S+K DV++FGVLM E S + P
Sbjct: 190 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 55/283 (19%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 33 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 92
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + + ++ IQ+A ++A G+ YL++
Sbjct: 93 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 152
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +M+P
Sbjct: 153 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 203
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T DV++FGV++ E+ + E P E+ LR
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRF 246
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+M+ + + P ++ L+ C + +P RP+ +I SI
Sbjct: 247 VMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 56/287 (19%)
Query: 366 RGKIGGDFVAIKKVYGDAS--------DQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
+G+ G VA+K + +AS + +L ++NH +I+L G C G L+ E
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 418 AVNGSLSVWIND--KGG--------------------KFLDWAQRIQIALDVATGLNYLH 455
A GSL ++ + K G + L I A ++ G+ YL
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Query: 456 SFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEY 515
VH+D+ N+L+ + KI++F L+R ++ + + K +MA E
Sbjct: 168 EMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK-WMAIES 223
Query: 516 LENGLVSTKLDVYAFGVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
L + + +T+ DV++FGVL+ E+ L G P + E L +
Sbjct: 224 LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--------------------LFN 263
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
L+ + P + + RL+ C K++P RP I++ + + +
Sbjct: 264 LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 55/283 (19%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 30 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 89
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + + ++ IQ+A ++A G+ YL++
Sbjct: 90 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 149
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +M+P
Sbjct: 150 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 200
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T DV++FGV++ E+ + E P E+ LR
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRF 243
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+M+ + + P ++ L+ C + +P RP+ +I SI
Sbjct: 244 VMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 55/283 (19%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 32 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 91
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + + ++ IQ+A ++A G+ YL++
Sbjct: 92 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 151
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +M+P
Sbjct: 152 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 202
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T DV++FGV++ E+ + E P E+ LR
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRF 245
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+M+ + + P ++ L+ C + +P RP+ +I SI
Sbjct: 246 VMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 51/289 (17%)
Query: 362 GSVYRGK----IGGDF---VAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G I G+ VA+K V AS ++I+ LN+ ++RLLG+
Sbjct: 31 GMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 90
Query: 407 NGGNWYLVYENAVNGSLSVWI--------NDKGGKFLDWAQRIQIALDVATGLNYLHSFT 458
G +V E +G L ++ N+ G + IQ+A ++A G+ YL++
Sbjct: 91 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-- 148
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
VH+D+ N ++ DF KI +F + R + ++ + +MAPE L++
Sbjct: 149 -KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKD 206
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ +T D+++FGV++ E+ S E P E+ L+ +MD
Sbjct: 207 GVFTTSSDMWSFGVVLWEITSLAEQP-----------------YQGLSNEQVLKFVMD-- 247
Query: 579 MQGNY---PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624
G Y P V L+ C + +P+ RP +I + L+ S
Sbjct: 248 --GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF 294
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 55/283 (19%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 26 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 85
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + + ++ IQ+A ++A G+ YL++
Sbjct: 86 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 145
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +M+P
Sbjct: 146 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 196
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T DV++FGV++ E+ + E P E+ LR
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRF 239
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+M+ + + P ++ L+ C + +P RP+ +I SI
Sbjct: 240 VMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 55/283 (19%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 32 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 91
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + + ++ IQ+A ++A G+ YL++
Sbjct: 92 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 151
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +M+P
Sbjct: 152 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 202
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T DV++FGV++ E+ + E P E+ LR
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRF 245
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+M+ + + P ++ L+ C + +P RP+ +I SI
Sbjct: 246 VMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 51/289 (17%)
Query: 362 GSVYRGK----IGGDF---VAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G I G+ VA+K V AS ++I+ LN+ ++RLLG+
Sbjct: 31 GMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 90
Query: 407 NGGNWYLVYENAVNGSLSVWI--------NDKGGKFLDWAQRIQIALDVATGLNYLHSFT 458
G +V E +G L ++ N+ G + IQ+A ++A G+ YL++
Sbjct: 91 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-- 148
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
VH+D+ N ++ DF KI +F + R + ++ + +MAPE L++
Sbjct: 149 -KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKD 206
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ +T D+++FGV++ E+ S E P E+ L+ +MD
Sbjct: 207 GVFTTSSDMWSFGVVLWEITSLAEQP-----------------YQGLSNEQVLKFVMD-- 247
Query: 579 MQGNY---PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624
G Y P V L+ C + +P RP +I + L+ S
Sbjct: 248 --GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 294
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 55/283 (19%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 39 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + ++ IQ+A ++A G+ YL++
Sbjct: 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK 158
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +M+P
Sbjct: 159 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 209
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T DV++FGV++ E+ + E P E+ LR
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRF 252
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+M+ + + P ++ L+ C + +P RP+ +I SI
Sbjct: 253 VMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H+D++ +N+L+ KIA+F LAR E + E+
Sbjct: 126 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPI 180
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP--VLHKED 566
+ APE + G + K DV++FG+L+ E+++ P + NP + + E
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEVIQNLER 231
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
G +R P + +L+ C K+ P RP D + + F A+
Sbjct: 232 GYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 45/278 (16%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 24 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 83
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + + ++ IQ+A ++A G+ YL++
Sbjct: 84 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 143
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
VH+D+ N ++ DF KI +F + R + ++ + +M+PE L++
Sbjct: 144 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMSPESLKD 199
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ +T DV++FGV++ E+ + E P E+ LR +M+
Sbjct: 200 GVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRFVMEGG 242
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+ + P +++ L+ C + +P RP+ +I SI
Sbjct: 243 LL-DKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 55/283 (19%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 61 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 120
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + + ++ IQ+A ++A G+ YL++
Sbjct: 121 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 180
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +M+P
Sbjct: 181 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 231
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T DV++FGV++ E+ + E P E+ LR
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRF 274
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+M+ + + P ++ L+ C + +P RP+ +I SI
Sbjct: 275 VMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 124
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H+D++ +N+L+ KIA+F LAR E + E+
Sbjct: 125 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPI 179
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP--VLHKED 566
+ APE + G + K DV++FG+L+ E+++ P + NP + + E
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEVIQNLER 230
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
G +R P + +L+ C K+ P RP D + + F A+
Sbjct: 231 GYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 276
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 55/283 (19%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 29 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 88
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + ++ IQ+A ++A G+ YL++
Sbjct: 89 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK 148
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +M+P
Sbjct: 149 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 199
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T DV++FGV++ E+ + E P E+ LR
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRF 242
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+M+ + + P ++ L+ C + +P RP+ +I SI
Sbjct: 243 VMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 126/294 (42%), Gaps = 61/294 (20%)
Query: 362 GSVYRGK----IGGDF---VAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G I G+ VA+K V AS ++I+ LN+ ++RLLG+
Sbjct: 30 GMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 89
Query: 407 NGGNWYLVYENAVNGSLSVWI--------NDKGGKFLDWAQRIQIALDVATGLNYLHSFT 458
G +V E +G L ++ N+ G + IQ+A ++A G+ YL++
Sbjct: 90 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-- 147
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N ++ DF KI +F + R + + G KG +MAP
Sbjct: 148 -KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMAP 200
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T D+++FGV++ E+ S E P E+ L+
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-----------------YQGLSNEQVLKF 243
Query: 574 LMDPSMQGNY---PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624
+MD G Y P V L+ C + +P RP +I + L+ S
Sbjct: 244 VMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 293
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ ++++ ++R++GIC +W LV E A G L+ ++ + + I++
Sbjct: 68 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVH 124
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
V+ G+ YL VH+D+ NVLL T AKI++F L++ E + +H
Sbjct: 125 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + S+K DV++FGVLM E S + P
Sbjct: 182 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ ++++ ++R++GIC +W LV E A G L+ ++ + + I++
Sbjct: 62 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVH 118
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
V+ G+ YL VH+D+ NVLL T AKI++F L++ E + +H
Sbjct: 119 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 175
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + S+K DV++FGVLM E S + P
Sbjct: 176 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H+D++ +N+L+ KIA+F LAR E + E+
Sbjct: 120 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPI 174
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP--VLHKED 566
+ APE + G + K DV++FG+L+ E+++ P + NP + + E
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEVIQNLER 225
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
G +R P + +L+ C K+ P RP D + + F A+
Sbjct: 226 GYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 56/287 (19%)
Query: 366 RGKIGGDFVAIKKVYGDAS--------DQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
+G+ G VA+K + +AS + +L ++NH +I+L G C G L+ E
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 418 AVNGSLSVWIND--KGG--------------------KFLDWAQRIQIALDVATGLNYLH 455
A GSL ++ + K G + L I A ++ G+ YL
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Query: 456 SFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEY 515
VH+D+ N+L+ + KI++F L+R ++ + + K +MA E
Sbjct: 168 EMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVK-WMAIES 223
Query: 516 LENGLVSTKLDVYAFGVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
L + + +T+ DV++FGVL+ E+ L G P + E L +
Sbjct: 224 LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--------------------LFN 263
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
L+ + P + + RL+ C K++P RP I++ + + +
Sbjct: 264 LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 24/222 (10%)
Query: 375 AIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434
A++ G ++I +L+KI H +++ L I +GG+ YL+ + G L I +KG F
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--F 112
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL---LDTDFRAKIANFALARPA 491
++ V + YLH VH+D+K N+L LD D + I++F L+
Sbjct: 113 YTERDASRLIFQVLDAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN 551
+ E ++ S GT GY+APE L S +D ++ GV+ +L G P Y E +
Sbjct: 167 -KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFYDEND 223
Query: 552 MLLVDVLNPVLHKED----------GEESLRHLMDPSMQGNY 583
L + + ++ D ++ +RHLM+ + +
Sbjct: 224 AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 51/289 (17%)
Query: 362 GSVYRGK----IGGDF---VAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G I G+ VA+K V AS ++I+ LN+ ++RLLG+
Sbjct: 28 GMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 87
Query: 407 NGGNWYLVYENAVNGSLSVWI--------NDKGGKFLDWAQRIQIALDVATGLNYLHSFT 458
G +V E +G L ++ N+ G + IQ+A ++A G+ YL++
Sbjct: 88 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-- 145
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
VH+D+ N ++ DF KI +F + R + ++ + +MAPE L++
Sbjct: 146 -KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKD 203
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ +T D+++FGV++ E+ S E P E+ L+ +MD
Sbjct: 204 GVFTTSSDMWSFGVVLWEITSLAEQP-----------------YQGLSNEQVLKFVMD-- 244
Query: 579 MQGNY---PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624
G Y P V L+ C + +P RP +I + L+ S
Sbjct: 245 --GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 291
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ ++++ ++R++GIC +W LV E A G L+ ++ + + I++
Sbjct: 58 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVH 114
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
V+ G+ YL VH+D+ NVLL T AKI++F L++ E + +H
Sbjct: 115 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + S+K DV++FGVLM E S + P
Sbjct: 172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ ++++ ++R++GIC +W LV E A G L+ ++ + + I++
Sbjct: 56 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVH 112
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
V+ G+ YL VH+D+ NVLL T AKI++F L++ E + +H
Sbjct: 113 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 169
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + S+K DV++FGVLM E S + P
Sbjct: 170 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 45/278 (16%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 33 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 92
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + + ++ IQ+A ++A G+ YL++
Sbjct: 93 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 152
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
VH+D+ N ++ DF KI +F + R + ++ + +M+PE L++
Sbjct: 153 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMSPESLKD 208
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ +T DV++FGV++ E+ + E P E+ LR +M+
Sbjct: 209 GVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRFVMEGG 251
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+ + P ++ L+ C + +P RP+ +I SI
Sbjct: 252 LL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 55/283 (19%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G G VAIK V AS ++I+ LN+ N ++RLLG+
Sbjct: 26 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 85
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLD--------WAQRIQIALDVATGLNYLHSFT 458
G ++ E G L ++ + + ++ IQ+A ++A G+ YL++
Sbjct: 86 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 145
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+D+ N + DF KI +F + R + + G KG +M+P
Sbjct: 146 ---FVHRDLAARNCXVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 196
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T DV++FGV++ E+ + E P E+ LR
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-----------------YQGLSNEQVLRF 239
Query: 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616
+M+ + + P +++ L+ C + +P RP+ +I SI
Sbjct: 240 VMEGGLL-DKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 88 IIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 144
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 145 VGENHLVKVADFGLSR---LMTGD-TXTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 200 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 241
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 242 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 284
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 148
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 149 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 204 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 245
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 246 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 288
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + + + +A +++ + YL +H+D+ N L
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 141
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 142 VGENHLVKVADFGLSR---LMTGD-TFTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ + +P ++P + L++ + P
Sbjct: 197 GVLLWEIATYGMSP----------YPGIDP--------SQVYELLEKDYRMERPEGCPEK 238
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 239 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 281
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 40 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 99
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 100 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 156
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 157 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 211
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 212 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 253
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 254 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 296
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 32/258 (12%)
Query: 373 FVAIK--------KVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
FVAIK K D + ++ + +H ++I L G+ ++ E NGSL
Sbjct: 37 FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIAN 484
++ G+F Q + + +A G+ YL +VH+ + N+L++++ K+++
Sbjct: 97 SFLRQNDGQFTV-IQLVGMLRGIAAGMKYLADMN---YVHRALAARNILVNSNLVCKVSD 152
Query: 485 FALARPAERQEGEFALTSHIVGT--KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKE 542
F L+R E + TS + G + APE ++ ++ DV+++G++M E++S E
Sbjct: 153 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 212
Query: 543 APALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKD 602
P +M DV+N + E+ R + P M + P L++ C +KD
Sbjct: 213 RPYW----DMTNQDVINAI------EQDYR--LPPPM--DCPSALHQLML----DCWQKD 254
Query: 603 PSGRPAMDKIAQSISRFL 620
+ RP +I ++ + +
Sbjct: 255 RNHRPKFGQIVNTLDKMI 272
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 28/236 (11%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 56 LMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 114
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H+D++ +N+L+ KIA+F LAR E + E+
Sbjct: 115 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPI 169
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP--VLHKED 566
+ APE + G + K DV++FG+L+ E+++ P + NP + + E
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEVIQNLER 220
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNA 622
G +R P + +L+ C K+ P RP D + + F A
Sbjct: 221 GYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 49/272 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 425 VWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + ++++ I +A G+ YL S +H+D+
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAAR 186
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSF 245
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
GVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMD------KPANCT 285
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 145
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 146 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 201 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 242
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 243 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 285
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 145
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 146 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 201 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 242
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 243 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 285
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 40/243 (16%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 127
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE------RQEGEFALTS 502
G+ ++ ++H+D++ +N+L+ KIA+F LAR E R+ +F +
Sbjct: 128 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 183
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP-- 560
+ APE + G + K DV++FG+L+ E+++ P + NP
Sbjct: 184 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEV 227
Query: 561 VLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ + E G +R P + +L+ C K+ P RP D + + F
Sbjct: 228 IQNLERGYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 276
Query: 621 NAS 623
A+
Sbjct: 277 TAT 279
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 34/240 (14%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H+D++ +N+L+ KIA+F LAR E E + G K
Sbjct: 126 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-----XTAREGAK 177
Query: 509 ---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP--VLH 563
+ APE + G + K DV++FG+L+ E+++ P + NP + +
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEVIQN 228
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
E G +R P + +L+ C K+ P RP D + + F A+
Sbjct: 229 LERGYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + + + +A +++ + YL +H+D+ N L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 148
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 149 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 204 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 245
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 246 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 288
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 61/294 (20%)
Query: 362 GSVYRGK----IGGDF---VAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G I G+ VA+K V AS ++I+ LN+ ++RLLG+
Sbjct: 32 GMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 91
Query: 407 NGGNWYLVYENAVNGSLSVWI--------NDKGGKFLDWAQRIQIALDVATGLNYLHSFT 458
G +V E +G L ++ N+ G + IQ+A ++A G+ YL++
Sbjct: 92 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-- 149
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+++ N ++ DF KI +F + R + + G KG +MAP
Sbjct: 150 -KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMAP 202
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T D+++FGV++ E+ S E P E+ L+
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-----------------YQGLSNEQVLKF 245
Query: 574 LMDPSMQGNY---PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624
+MD G Y P V L+ C + +P+ RP +I + L+ S
Sbjct: 246 VMD----GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF 295
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + + + +A +++ + YL +H+D+ N L
Sbjct: 87 IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 143
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 144 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 199 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 240
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 40/243 (16%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE------RQEGEFALTS 502
G+ ++ ++H+D++ +N+L+ KIA+F LAR E R+ +F +
Sbjct: 120 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 175
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP-- 560
+ APE + G + K DV++FG+L+ E+++ P + NP
Sbjct: 176 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEV 219
Query: 561 VLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ + E G +R P + +L+ C K+ P RP D + + F
Sbjct: 220 IQNLERGYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
Query: 621 NAS 623
A+
Sbjct: 269 TAT 271
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 61/294 (20%)
Query: 362 GSVYRGK----IGGDF---VAIKKVYGDAS--DQIKLLNK------INHSSLIRLLGICF 406
G VY G I G+ VA+K V AS ++I+ LN+ ++RLLG+
Sbjct: 31 GMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 90
Query: 407 NGGNWYLVYENAVNGSLSVWI--------NDKGGKFLDWAQRIQIALDVATGLNYLHSFT 458
G +V E +G L ++ N+ G + IQ+A ++A G+ YL++
Sbjct: 91 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-- 148
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG-----YMAP 513
VH+++ N ++ DF KI +F + R + + G KG +MAP
Sbjct: 149 -KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMAP 201
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573
E L++G+ +T D+++FGV++ E+ S E P E+ L+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-----------------YQGLSNEQVLKF 244
Query: 574 LMDPSMQGNY---PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624
+MD G Y P V L+ C + +P+ RP +I + L+ S
Sbjct: 245 VMD----GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF 294
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 99 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 154
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + F + + APE L S DV++FGV++ E+ +
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 49/272 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 425 VW--------------INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
+ IN + + + + +A G+ YL S +H+D+
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAAR 186
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSF 245
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
GVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMD------KPANCT 285
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL++ HS
Sbjct: 77 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV--- 124
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYY 181
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 40/243 (16%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 128
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE------RQEGEFALTS 502
G+ ++ ++H+D++ +N+L+ KIA+F LAR E R+ +F +
Sbjct: 129 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 184
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP-- 560
+ APE + G + K DV++FG+L+ E+++ P + NP
Sbjct: 185 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEV 228
Query: 561 VLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ + E G +R P + +L+ C K+ P RP D + + F
Sbjct: 229 IQNLERGYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 277
Query: 621 NAS 623
A+
Sbjct: 278 TAT 280
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + + + +A +++ + YL +H+D+ N L
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 141
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 142 VGENHLVKVADFGLSR---LMTGD-TXTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ + +P ++P + L++ + P
Sbjct: 197 GVLLWEIATYGMSP----------YPGIDP--------SQVYELLEKDYRMERPEGCPEK 238
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 239 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 281
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + + + +A +++ + YL +H+D+ N L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 143
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 144 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 199 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 240
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + + + +A +++ + YL +H+D+ N L
Sbjct: 87 IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 143
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 144 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 199 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 240
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 40/243 (16%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE------RQEGEFALTS 502
G+ ++ ++H+D++ +N+L+ KIA+F LAR E R+ +F +
Sbjct: 120 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK- 175
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP-- 560
+ APE + G + K DV++FG+L+ E+++ P + NP
Sbjct: 176 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEV 219
Query: 561 VLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ + E G +R P + +L+ C K+ P RP D + + F
Sbjct: 220 IQNLERGYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
Query: 621 NAS 623
A+
Sbjct: 269 TAT 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 34/240 (14%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 120
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H+D++ +N+L+ KIA+F LAR E E + G K
Sbjct: 121 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-----XTAREGAK 172
Query: 509 ---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP--VLH 563
+ APE + G + K DV++FG+L+ E+++ P + NP + +
Sbjct: 173 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEVIQN 223
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
E G +R P + +L+ C K+ P RP D + + F A+
Sbjct: 224 LERGYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 34/240 (14%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H+D++ +N+L+ KIA+F LAR E E + G K
Sbjct: 120 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-----XTAREGAK 171
Query: 509 ---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP--VLH 563
+ APE + G + K DV++FG+L+ E+++ P + NP + +
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEVIQN 222
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
E G +R P + +L+ C K+ P RP D + + F A+
Sbjct: 223 LERGYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 40/243 (16%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 121
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE------RQEGEFALTS 502
G+ ++ ++H+D++ +N+L+ KIA+F LAR E R+ +F +
Sbjct: 122 EGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 177
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP-- 560
+ APE + G + K DV++FG+L+ E+++ P + NP
Sbjct: 178 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEV 221
Query: 561 VLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ + E G +R P + +L+ C K+ P RP D + + F
Sbjct: 222 IQNLERGYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 270
Query: 621 NAS 623
A+
Sbjct: 271 TAT 273
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + + + +A +++ + YL +H+D+ N L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 143
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 144 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 199 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 240
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 40/233 (17%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+I +L++ + S + + G G +++ E GS + + G F D Q +
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPF-DEFQIATMLK 127
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT---- 501
++ GL+YLHS +H+DIK +NVLL K+A+F +A G+ T
Sbjct: 128 EILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVA-------GQLTDTQIKR 177
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP--ALYSEENMLLVDVLN 559
+ VGT +MAPE ++ +K D+++ G+ +E+ G E P ++ + L+ N
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG-EPPNSDMHPMRVLFLIPKNN 236
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKI 612
P P++ G++ I++CL KDPS RP ++
Sbjct: 237 P----------------PTLVGDFTKSFK----EFIDACLNKDPSFRPTAKEL 269
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 49/272 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 425 VWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + ++++ I +A G+ YL S +H+D+
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAAR 232
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSF 291
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
GVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 292 GVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMD------KPANCT 331
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 332 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 7/161 (4%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI-NDKGGKFLDWAQRIQI 443
++ L+ + H L+RL + Y++ E GSL ++ +D+GGK L + I
Sbjct: 56 EEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDF 114
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH 503
+ +A G+ Y+ ++H+D++ +NVL+ KIA+F LAR E + E+
Sbjct: 115 SAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIE--DNEYTAREG 169
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + G + K +V++FG+L+ E+++ + P
Sbjct: 170 AKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 49/272 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 425 VWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + ++++ I +A G+ YL S +H+D+
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLTAR 173
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 174 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSF 232
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
GVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 233 GVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMDK------PANCT 272
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 273 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 304
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 49/272 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 425 VWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + ++++ I +A G+ YL S +H+D+
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAAR 186
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSF 245
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
GVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMDK------PANCT 285
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 37/273 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 148
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 149 VGENHLVKVADFGLSR---LMTGD-TXTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 204 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 245
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
V L+ +C + +PS RP+ +I Q+ S
Sbjct: 246 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 120/274 (43%), Gaps = 53/274 (19%)
Query: 374 VAIKKVYGDASDQ-----------IKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGS 422
VA+K + DA+++ +K++ K H ++I LLG C G Y++ E A G+
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 119
Query: 423 LSVWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIK 468
L ++ + ++++ I +A G+ YL S +H+D+
Sbjct: 120 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLA 176
Query: 469 CSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV+
Sbjct: 177 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVW 235
Query: 529 AFGVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586
+FGVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 236 SFGVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMDK------PAN 275
Query: 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 276 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 309
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 49/272 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 425 VWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + ++++ I +A G+ YL S +H+D+
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAAR 175
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 176 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSF 234
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
GVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 235 GVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMDK------PANCT 274
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 275 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 306
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 37/273 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 31 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 147
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 148 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 202
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 203 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 244
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
V L+ +C + +PS RP+ +I Q+ S
Sbjct: 245 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 107/218 (49%), Gaps = 29/218 (13%)
Query: 351 TDDFNPSCWIK---------GSVYRGKIGGDF------VAIKKVYGDASDQIK------- 388
T + +PSC + G VY+G + VAIK + +++ +
Sbjct: 38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 97
Query: 389 -LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ + +H ++IRL G+ ++ E NG+L ++ +K G+F Q + + +
Sbjct: 98 GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEF-SVLQLVGMLRGI 156
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ-EGEFALTSHIVG 506
A G+ YL N +VH+D+ N+L++++ K+++F L+R E E + + +
Sbjct: 157 AAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 213
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ + APE + ++ DV++FG++M E+++ E P
Sbjct: 214 IR-WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 37/273 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 143
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 144 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 199 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 240
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
V L+ +C + +PS RP+ +I Q+ S
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 122/259 (47%), Gaps = 36/259 (13%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK + +D+ + ++ + +H ++I L G+ ++ E NGSL
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ G+F Q + + + +G+ YL + +VH+D+ N+L++++ K+++F
Sbjct: 105 FLRKNDGRFT-VIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDF 160
Query: 486 ALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKE 542
++R E + E A T+ G K + APE + ++ DV+++G++M E++S E
Sbjct: 161 GMSRVLE-DDPEAAYTTR--GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 217
Query: 543 APALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKD 602
P +M DV+ + EE R + P M I + +L+ C +K+
Sbjct: 218 RPYW----DMSNQDVIKAI------EEGYR--LPPPMD------CPIALHQLMLDCWQKE 259
Query: 603 PSGRPAMDKIAQSISRFLN 621
S RP +I + + +
Sbjct: 260 RSDRPKFGQIVNMLDKLIR 278
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 120/274 (43%), Gaps = 53/274 (19%)
Query: 374 VAIKKVYGDASDQ-----------IKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGS 422
VA+K + DA+++ +K++ K H ++I LLG C G Y++ E A G+
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 423 LSVWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIK 468
L ++ + ++++ I +A G+ YL S +H+D+
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLA 184
Query: 469 CSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV+
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVW 243
Query: 529 AFGVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586
+FGVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMDK------PAN 283
Query: 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 284 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 77 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 124
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE-YLENGLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGXKYY 181
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 76 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 123
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYY 180
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 24 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 83
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 84 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 131
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYY 188
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 189 STAVDIWSLGCIFAEMVTRR 208
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 77 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 124
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYY 181
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 76 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 123
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYY 180
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
L+ ++ H L+RL + Y++ E NGSL ++ G L + + +A +A
Sbjct: 57 LMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 115
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H++++ +N+L+ KIA+F LAR E + E+
Sbjct: 116 EGMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPI 170
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP--VLHKED 566
+ APE + G + K DV++FG+L+ E+++ P + NP + + E
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------YPGMTNPEVIQNLER 221
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
G +R P + +L+ C K+ P RP D + + F A+
Sbjct: 222 GYRMVR-----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 267
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 122/259 (47%), Gaps = 36/259 (13%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK + +D+ + ++ + +H ++I L G+ ++ E NGSL
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ G+F Q + + + +G+ YL + +VH+D+ N+L++++ K+++F
Sbjct: 99 FLRKNDGRFTV-IQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDF 154
Query: 486 ALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKE 542
++R E + E A T+ G K + APE + ++ DV+++G++M E++S E
Sbjct: 155 GMSRVLE-DDPEAAYTTR--GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 211
Query: 543 APALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKD 602
P +M DV+ + EE R + P M I + +L+ C +K+
Sbjct: 212 RPYW----DMSNQDVIKAI------EEGYR--LPPPMD------CPIALHQLMLDCWQKE 253
Query: 603 PSGRPAMDKIAQSISRFLN 621
S RP +I + + +
Sbjct: 254 RSDRPKFGQIVNMLDKLIR 272
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 50/266 (18%)
Query: 375 AIKKVYGDASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSL---------- 423
A K + D + ++++L K+ +H ++I LLG C + G YL E A +G+L
Sbjct: 64 ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 123
Query: 424 ----SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR 479
+ I + L Q + A DVA G++YL + +H+D+ N+L+ ++
Sbjct: 124 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYV 180
Query: 480 AKIANFALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLM 534
AKIA+F L+R E ++ T G +MA E L + +T DV+++GVL+
Sbjct: 181 AKIADFGLSRGQE---------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231
Query: 535 LEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRL 594
E++S P M ++ + E+ L D V L
Sbjct: 232 WEIVSLGGTPYC----GMTCAELYEKLPQGYRLEKPLN--CDDE------------VYDL 273
Query: 595 IESCLKKDPSGRPAMDKIAQSISRFL 620
+ C ++ P RP+ +I S++R L
Sbjct: 274 MRQCWREKPYERPSFAQILVSLNRML 299
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 24 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 83
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 84 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 131
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE-YLENGLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGXKYY 188
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 189 STAVDIWSLGCIFAEMVTRR 208
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E+ ++ KF+D + I L + GL + HS
Sbjct: 80 LYLVFEH---------VDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 127
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 184
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 77 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 124
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYY 181
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 78 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 125
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYY 182
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 43/265 (16%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK SD ++ + + +H +++L+G+ W ++ E G L
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 127
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + LD A I A ++T L YL S VH+DI NVL+ ++ K+ +F
Sbjct: 128 FLQVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDF 183
Query: 486 ALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
L+R E +++ +KG +MAPE + ++ DV+ FGV M E+L
Sbjct: 184 GLSRYMED-------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH 236
Query: 541 KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLK 600
P + N DV+ + E+GE R M P N PP + L+ C
Sbjct: 237 GVKPFQGVKNN----DVIGRI---ENGE---RLPMPP----NCPPT----LYSLMTKCWA 278
Query: 601 KDPSGRPAMDKIAQSISRFLNASLA 625
DPS RP ++ +S L A
Sbjct: 279 YDPSRRPRFTELKAQLSTILEEEKA 303
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 21 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 80
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 81 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 128
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYY 185
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 186 STAVDIWSLGCIFAEMVTRR 205
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 50/266 (18%)
Query: 375 AIKKVYGDASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSL---------- 423
A K + D + ++++L K+ +H ++I LLG C + G YL E A +G+L
Sbjct: 54 ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 113
Query: 424 ----SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR 479
+ I + L Q + A DVA G++YL + +H+D+ N+L+ ++
Sbjct: 114 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYV 170
Query: 480 AKIANFALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLM 534
AKIA+F L+R E ++ T G +MA E L + +T DV+++GVL+
Sbjct: 171 AKIADFGLSRGQE---------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 221
Query: 535 LEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRL 594
E++S P M ++ + E+ L D V L
Sbjct: 222 WEIVSLGGTPYC----GMTCAELYEKLPQGYRLEKPLN--CDDE------------VYDL 263
Query: 595 IESCLKKDPSGRPAMDKIAQSISRFL 620
+ C ++ P RP+ +I S++R L
Sbjct: 264 MRQCWREKPYERPSFAQILVSLNRML 289
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 49/272 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 425 VWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + ++++ I +A G+ YL S +H+D+
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAAR 186
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSF 245
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
GVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMDK------PANCT 285
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 19/192 (9%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
YLV+E+ V+ L +++ + + GL + HS +H+D+K
Sbjct: 76 LYLVFEH-VHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQ 131
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYA 529
N+L++T+ K+A+F LAR + +H V T Y APE L ST +D+++
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYYSTAVDIWS 188
Query: 530 FGVLMLEMLSGK 541
G + EM++ +
Sbjct: 189 LGCIFAEMVTRR 200
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 37/273 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + + + +A +++ + YL +H+D+ N L
Sbjct: 85 IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 141
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 142 VGENHLVKVADFGLSR---LMTGD-TXTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ + +P ++P + L++ + P
Sbjct: 197 GVLLWEIATYGMSP----------YPGIDP--------SQVYELLEKDYRMERPEGCPEK 238
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
V L+ +C + +PS RP+ +I Q+ S
Sbjct: 239 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 49/272 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 425 VWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + ++++ I +A G+ YL S +H+D+
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAAR 186
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVK-WMAPEALFDRVYTHQSDVWSF 245
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
GVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMDK------PANCT 285
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 37/267 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 148
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 149 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 204 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 245
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSIS 617
V L+ +C + +PS RP+ +I Q+
Sbjct: 246 VYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 37/267 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 92 IIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 148
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 149 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 204 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 245
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSIS 617
V L+ +C + +PS RP+ +I Q+
Sbjct: 246 VYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++I L G+ +V E NGSL ++ G+F Q
Sbjct: 72 GEAS----IMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV-IQL 126
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + ++ G+ YL +VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 127 VGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 182
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + APE + ++ DV+++G++M E++S E P Y E M DV
Sbjct: 183 TTR--GGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP--YWE--MTNQDV 236
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V EE R PS P + +L+ C +K+ + RP D+I +
Sbjct: 237 IKAV------EEGYRL---PS-----PMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLD 282
Query: 618 RFLN 621
+ +
Sbjct: 283 KLIR 286
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 43/265 (16%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK SD ++ + + +H +++L+G+ W ++ E G L
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 102
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + LD A I A ++T L YL S VH+DI NVL+ ++ K+ +F
Sbjct: 103 FLQVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDF 158
Query: 486 ALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
L+R E +++ +KG +MAPE + ++ DV+ FGV M E+L
Sbjct: 159 GLSRYMED-------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH 211
Query: 541 KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLK 600
P + N DV+ + E+GE R M P N PP + L+ C
Sbjct: 212 GVKPFQGVKNN----DVIGRI---ENGE---RLPMPP----NCPPT----LYSLMTKCWA 253
Query: 601 KDPSGRPAMDKIAQSISRFLNASLA 625
DPS RP ++ +S L A
Sbjct: 254 YDPSRRPRFTELKAQLSTILEEEKA 278
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 392 KINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGL 451
+++H +++ ++ + +YLV E +LS +I G +D A I + G+
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTA--INFTNQILDGI 124
Query: 452 NYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511
+ H VH+DIK N+L+D++ KI +F +A+ E T+H++GT Y
Sbjct: 125 KHAHDMRI---VHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYF 179
Query: 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
+PE + D+Y+ G+++ EML G+
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 130 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 185
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 77 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 124
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 181
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 120/244 (49%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 95 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQL 149
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL ++ +VH+D+ N+L++++ K+++F LAR E + E A
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLE-DDPEAAY 205
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 206 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 259
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 260 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 618 RFLN 621
+ +
Sbjct: 306 KLIR 309
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 77 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 124
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 181
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 76 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 123
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 180
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 76 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 123
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 180
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 110/261 (42%), Gaps = 38/261 (14%)
Query: 371 GDFVAIKKVYGDASDQ--------IKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVN 420
G+ VA+K + DA Q I +L + H +I+ G C + G + LV E
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 421 GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA 480
GSL ++ + AQ + A + G+ YLH+ ++H+D+ NVLLD D
Sbjct: 120 GSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLV 173
Query: 481 KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEML-- 538
KI +F LA+ + + + APE L+ DV++FGV + E+L
Sbjct: 174 KIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 233
Query: 539 --SGKEAPALYSE-----ENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591
S + P + E + + V L +L E GE R P V
Sbjct: 234 CDSSQSPPTKFLELIGIAQGQMTVLRLTELL--ERGERLPR-----------PDKCPAEV 280
Query: 592 IRLIESCLKKDPSGRPAMDKI 612
L+++C + + S RP + +
Sbjct: 281 YHLMKNCWETEASFRPTFENL 301
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 43/265 (16%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK SD ++ + + +H +++L+G+ W ++ E G L
Sbjct: 46 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 104
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + LD A I A ++T L YL S VH+DI NVL+ ++ K+ +F
Sbjct: 105 FLQVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDF 160
Query: 486 ALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
L+R E +++ +KG +MAPE + ++ DV+ FGV M E+L
Sbjct: 161 GLSRYMED-------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH 213
Query: 541 KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLK 600
P + N DV+ + E+GE R M P N PP + L+ C
Sbjct: 214 GVKPFQGVKNN----DVIGRI---ENGE---RLPMPP----NCPPT----LYSLMTKCWA 255
Query: 601 KDPSGRPAMDKIAQSISRFLNASLA 625
DPS RP ++ +S L A
Sbjct: 256 YDPSRRPRFTELKAQLSTILEEEKA 280
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 77 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 124
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 181
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 79 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 126
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 183
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 49/272 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ E A G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 425 VWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + ++++ I +A G+ YL S +H+D+
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAAR 186
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ + +IA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSF 245
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
GVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMDK------PANCT 285
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 80 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 127
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 184
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 79 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 126
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 183
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 97 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 152
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 153 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 38/285 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 273 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 332
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+++ N L
Sbjct: 333 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCL 389
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 390 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 444
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 445 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 486
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNISE 634
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K + +
Sbjct: 487 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGK 531
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 43/265 (16%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK SD ++ + + +H +++L+G+ W ++ E G L
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 96
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + LD A I A ++T L YL S VH+DI NVL+ ++ K+ +F
Sbjct: 97 FLQVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDF 152
Query: 486 ALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
L+R E +++ +KG +MAPE + ++ DV+ FGV M E+L
Sbjct: 153 GLSRYMED-------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH 205
Query: 541 KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLK 600
P + N DV+ + E+GE R M P N PP + L+ C
Sbjct: 206 GVKPFQGVKNN----DVIGRI---ENGE---RLPMPP----NCPPT----LYSLMTKCWA 247
Query: 601 KDPSGRPAMDKIAQSISRFLNASLA 625
DPS RP ++ +S L A
Sbjct: 248 YDPSRRPRFTELKAQLSTILEEEKA 272
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 79 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 126
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 127 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 183
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 43/265 (16%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK SD ++ + + +H +++L+G+ W ++ E G L
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 101
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + LD A I A ++T L YL S VH+DI NVL+ ++ K+ +F
Sbjct: 102 FLQVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDF 157
Query: 486 ALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
L+R E +++ +KG +MAPE + ++ DV+ FGV M E+L
Sbjct: 158 GLSRYMED-------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH 210
Query: 541 KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLK 600
P + N DV+ + E+GE R M P N PP + L+ C
Sbjct: 211 GVKPFQGVKNN----DVIGRI---ENGE---RLPMPP----NCPPT----LYSLMTKCWA 252
Query: 601 KDPSGRPAMDKIAQSISRFLNASLA 625
DPS RP ++ +S L A
Sbjct: 253 YDPSRRPRFTELKAQLSTILEEEKA 277
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 78 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 125
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 182
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 104 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 159
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 98 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 153
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 154 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 102 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 157
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 43/261 (16%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK SD ++ + + +H +++L+G+ W ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 99
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + LD A I A ++T L YL S VH+DI NVL+ ++ K+ +F
Sbjct: 100 FLQVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDF 155
Query: 486 ALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
L+R E +++ +KG +MAPE + ++ DV+ FGV M E+L
Sbjct: 156 GLSRYMED-------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH 208
Query: 541 KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLK 600
P + N DV+ + E+GE R M P N PP + L+ C
Sbjct: 209 GVKPFQGVKNN----DVIGRI---ENGE---RLPMPP----NCPPT----LYSLMTKCWA 250
Query: 601 KDPSGRPAMDKIAQSISRFLN 621
DPS RP ++ +S L
Sbjct: 251 YDPSRRPRFTELKAQLSTILE 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 37/267 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 143
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 144 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 199 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 240
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSIS 617
V L+ +C + +PS RP+ +I Q+
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 80 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 127
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 184
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 36/259 (13%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK + +D+ + ++ + +H ++I L G+ ++ E NGSL
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ G+F Q + + + +G+ YL + VH+D+ N+L++++ K+++F
Sbjct: 120 FLRKNDGRFT-VIQLVGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDF 175
Query: 486 ALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKE 542
++R E + E A T+ G K + APE + ++ DV+++G++M E++S E
Sbjct: 176 GMSRVLE-DDPEAAYTTR--GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 232
Query: 543 APALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKD 602
P +M DV+ + EE R + P M I + +L+ C +K+
Sbjct: 233 RPYW----DMSNQDVIKAI------EEGYR--LPPPMD------CPIALHQLMLDCWQKE 274
Query: 603 PSGRPAMDKIAQSISRFLN 621
S RP +I + + +
Sbjct: 275 RSDRPKFGQIVNMLDKLIR 293
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 21 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 80
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 81 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 128
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 185
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 186 STAVDIWSLGCIFAEMVTRR 205
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 99 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 154
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 106 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 161
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 78 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 125
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 182
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 103 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 158
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 159 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 77 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 124
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 181
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 78 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 125
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 182
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 99 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 154
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 43/261 (16%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK SD ++ + + +H +++L+G+ W ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 99
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
++ + LD A I A ++T L YL S VH+DI NVL+ ++ K+ +F
Sbjct: 100 FLQVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDF 155
Query: 486 ALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
L+R E +++ +KG +MAPE + ++ DV+ FGV M E+L
Sbjct: 156 GLSRYMED-------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH 208
Query: 541 KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLK 600
P + N DV+ + E+GE R M P N PP + L+ C
Sbjct: 209 GVKPFQGVKNN----DVIGRI---ENGE---RLPMPP----NCPPT----LYSLMTKCWA 250
Query: 601 KDPSGRPAMDKIAQSISRFLN 621
DPS RP ++ +S L
Sbjct: 251 YDPSRRPRFTELKAQLSTILE 271
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 45/262 (17%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK SD ++ + + +H +++L+G+ W ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 99
Query: 426 WINDKGGKF-LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIAN 484
++ + KF LD A I A ++T L YL S VH+DI NVL+ ++ K+ +
Sbjct: 100 FLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 485 FALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
F L+R E ++ +KG +MAPE + ++ DV+ FGV M E+L
Sbjct: 155 FGLSRYMED-------STXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 540 GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
P + N DV+ + E+GE R M P N PP + L+ C
Sbjct: 208 HGVKPFQGVKNN----DVIGRI---ENGE---RLPMPP----NCPPT----LYSLMTKCW 249
Query: 600 KKDPSGRPAMDKIAQSISRFLN 621
DPS RP ++ +S L
Sbjct: 250 AYDPSRRPRFTELKAQLSTILE 271
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 114/262 (43%), Gaps = 45/262 (17%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK SD ++ + + +H +++L+G+ W ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 99
Query: 426 WINDKGGKF-LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIAN 484
++ + KF LD A I A ++T L YL S VH+DI NVL+ K+ +
Sbjct: 100 FLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGD 154
Query: 485 FALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
F L+R E +++ +KG +MAPE + ++ DV+ FGV M E+L
Sbjct: 155 FGLSRYMED-------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 540 GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
P + N DV+ + E+GE R M P N PP + L+ C
Sbjct: 208 HGVKPFQGVKNN----DVIGRI---ENGE---RLPMPP----NCPPT----LYSLMTKCW 249
Query: 600 KKDPSGRPAMDKIAQSISRFLN 621
DPS RP ++ +S L
Sbjct: 250 AYDPSRRPRFTELKAQLSTILE 271
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 105 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 160
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 161 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 120/244 (49%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 66 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV-IQL 120
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL ++ +VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 121 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 176
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 177 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 230
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 231 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
Query: 618 RFLN 621
+ +
Sbjct: 277 KLIR 280
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 102 SLREYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 157
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 116/262 (44%), Gaps = 45/262 (17%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK SD ++ + + +H +++L+G+ W ++ E G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 479
Query: 426 WINDKGGKF-LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIAN 484
++ + KF LD A I A ++T L YL S VH+DI NVL+ ++ K+ +
Sbjct: 480 FLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGD 534
Query: 485 FALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
F L+R E +++ +KG +MAPE + ++ DV+ FGV M E+L
Sbjct: 535 FGLSRYMED-------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
Query: 540 GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
P + N DV+ + E+GE R M P N PP + L+ C
Sbjct: 588 HGVKPFQGVKNN----DVIGRI---ENGE---RLPMPP----NCPPT----LYSLMTKCW 629
Query: 600 KKDPSGRPAMDKIAQSISRFLN 621
DPS RP ++ +S L
Sbjct: 630 AYDPSRRPRFTELKAQLSTILE 651
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 25/196 (12%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDASD-----QIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V GK G + VAIK + G S+ + K++ ++H L++L G+C +++
Sbjct: 23 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 82
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E NG L ++ + +F Q +++ DV + YL S +H+D+ N L+
Sbjct: 83 TEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLV 138
Query: 475 DTDFRAKIANFALARPAERQEGEFALTSHIVGTKG------YMAPEYLENGLVSTKLDVY 528
+ K+++F L+R + L ++G + PE L S+K D++
Sbjct: 139 NDQGVVKVSDFGLSR--------YVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 529 AFGVLMLEMLSGKEAP 544
AFGVLM E+ S + P
Sbjct: 191 AFGVLMWEIYSLGKMP 206
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 117 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 172
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 118/244 (48%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 95 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV-IQL 149
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL +VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 205
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 206 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 259
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 260 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 618 RFLN 621
+ +
Sbjct: 306 KLIR 309
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 38/285 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 231 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 290
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+++ N L
Sbjct: 291 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCL 347
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 348 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 402
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 403 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 444
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNISE 634
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K + +
Sbjct: 445 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGK 489
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 234 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + + + +A +++ + YL +H+++ N L
Sbjct: 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCL 350
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 351 VGENHLVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAF 405
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 406 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 447
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 448 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 490
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 117 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 172
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 120/244 (49%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 66 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQL 120
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL ++ +VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 121 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 176
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 177 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 230
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 231 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
Query: 618 RFLN 621
+ +
Sbjct: 277 KLIR 280
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 88 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 144
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ + G K + APE L S K DV+AF
Sbjct: 145 VGENHLVKVADFGLSR---LMTGD--TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 200 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 241
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 242 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 284
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 19/193 (9%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDASD-----QIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V GK G + VAIK + G S+ + K++ ++H L++L G+C +++
Sbjct: 18 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E NG L ++ + +F Q +++ DV + YL S +H+D+ N L+
Sbjct: 78 TEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLV 133
Query: 475 DTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAFG 531
+ K+++F L+R E + VG+K + PE L S+K D++AFG
Sbjct: 134 NDQGVVKVSDFGLSRYVLDDE-----YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 188
Query: 532 VLMLEMLSGKEAP 544
VLM E+ S + P
Sbjct: 189 VLMWEIYSLGKMP 201
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 89/178 (50%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ K + +D + +Q + G+ YL + ++H+++ N+L++ + R K
Sbjct: 100 SLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRNLATRNILVENENRVK 155
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + + APE L S DV++FGV++ E+ +
Sbjct: 156 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 120/244 (49%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 95 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQL 149
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL ++ +VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 205
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 206 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 259
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 260 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 618 RFLN 621
+ +
Sbjct: 306 KLIR 309
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
+ E G+L ++ + + ++ + +A +++ + YL +H+D+ N L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 145
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ + G K + APE L S K DV+AF
Sbjct: 146 VGENHLVKVADFGLSR---LMTGD--TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 201 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYELLEKDYRMERPEGCPEK 242
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSI-SRFLNASLAWELSKNI 632
V L+ +C + +PS RP+ +I Q+ + F +S++ E+ K +
Sbjct: 243 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 285
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 118/244 (48%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 95 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQL 149
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL +VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 205
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 206 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 259
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 260 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 618 RFLN 621
+ +
Sbjct: 306 KLIR 309
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 118/244 (48%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 95 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQL 149
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL +VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 205
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 206 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 259
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 260 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 618 RFLN 621
+ +
Sbjct: 306 KLIR 309
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 118/244 (48%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 95 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQL 149
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL +VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 205
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 206 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 259
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 260 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 618 RFLN 621
+ +
Sbjct: 306 KLIR 309
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 118/244 (48%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 93 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQL 147
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL +VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 148 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 203
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 204 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 257
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 258 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 303
Query: 618 RFLN 621
+ +
Sbjct: 304 KLIR 307
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 80 LYLVFE---------FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 127
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 128 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 184
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 118/244 (48%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 83 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQL 137
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL +VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 138 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 193
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 194 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 247
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 248 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 293
Query: 618 RFLN 621
+ +
Sbjct: 294 KLIR 297
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 19/193 (9%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDASD-----QIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V GK G + VAIK + G S+ + K++ ++H L++L G+C +++
Sbjct: 38 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E NG L ++ + +F Q +++ DV + YL S +H+D+ N L+
Sbjct: 98 TEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLV 153
Query: 475 DTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAFG 531
+ K+++F L+R E + VG+K + PE L S+K D++AFG
Sbjct: 154 NDQGVVKVSDFGLSRYVLDDE-----ETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 532 VLMLEMLSGKEAP 544
VLM E+ S + P
Sbjct: 209 VLMWEIYSLGKMP 221
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 19/193 (9%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDASD-----QIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V GK G + VAIK + G S+ + K++ ++H L++L G+C +++
Sbjct: 22 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 81
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E NG L ++ + +F Q +++ DV + YL S +H+D+ N L+
Sbjct: 82 TEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLV 137
Query: 475 DTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAFG 531
+ K+++F L+R E + VG+K + PE L S+K D++AFG
Sbjct: 138 NDQGVVKVSDFGLSRYVLDDE-----YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 192
Query: 532 VLMLEMLSGKEAP 544
VLM E+ S + P
Sbjct: 193 VLMWEIYSLGKMP 205
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+ K+ D A +I LL ++NH ++++LL +
Sbjct: 17 GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 77 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 124
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYY 181
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+ K+ D A +I LL ++NH ++++LL +
Sbjct: 16 GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 76 LYLVFE---------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 123
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + +H V T Y APE L
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYY 180
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 50/266 (18%)
Query: 375 AIKKVYGDASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSL---------- 423
A K + D + ++++L K+ +H ++I LLG C + G YL E A +G+L
Sbjct: 61 ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 120
Query: 424 ----SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR 479
+ I + L Q + A DVA G++YL + +H+++ N+L+ ++
Sbjct: 121 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYV 177
Query: 480 AKIANFALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLM 534
AKIA+F L+R E ++ T G +MA E L + +T DV+++GVL+
Sbjct: 178 AKIADFGLSRGQE---------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 228
Query: 535 LEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRL 594
E++S P M ++ + E+ L D V L
Sbjct: 229 WEIVSLGGTPYC----GMTCAELYEKLPQGYRLEKPLN--CDDE------------VYDL 270
Query: 595 IESCLKKDPSGRPAMDKIAQSISRFL 620
+ C ++ P RP+ +I S++R L
Sbjct: 271 MRQCWREKPYERPSFAQILVSLNRML 296
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ KF+D + I L + GL + HS
Sbjct: 78 LYLVFE---------FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 125
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 182
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 119/244 (48%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 95 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQL 149
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL ++ +VH+D+ N+L++++ K+++F L R E + E A
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE-DDPEAAY 205
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 206 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 259
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 260 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 618 RFLN 621
+ +
Sbjct: 306 KLIR 309
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 371 GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNG 421
G+ VA+KK+ D +I++L + H ++++ G+C++ G N L+ E G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
SL ++ + +D + +Q + G+ YL + ++H+D+ N+L++ + R K
Sbjct: 102 SLRDYLQAHAER-IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 157
Query: 482 IANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
I +F L + + + + + APE L S DV++FGV++ E+ +
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E LS+ + D F+D + I L + GL + HS
Sbjct: 79 LYLVFE-----FLSMDLKD----FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 126
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 183
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 19/193 (9%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDASD-----QIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V GK G + VAIK + G S+ + K++ ++H L++L G+C +++
Sbjct: 38 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E NG L ++ + +F Q +++ DV + YL S +H+D+ N L+
Sbjct: 98 TEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLV 153
Query: 475 DTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAFG 531
+ K+++F L+R E + VG+K + PE L S+K D++AFG
Sbjct: 154 NDQGVVKVSDFGLSRYVLDDE-----YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 532 VLMLEMLSGKEAP 544
VLM E+ S + P
Sbjct: 209 VLMWEIYSLGKMP 221
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E LS+ + D F+D + I L + GL + HS
Sbjct: 80 LYLVFE-----FLSMDLKD----FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 127
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 184
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 19/193 (9%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDASD-----QIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V GK G + VAIK + G S+ + K++ ++H L++L G+C +++
Sbjct: 23 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 82
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E NG L ++ + +F Q +++ DV + YL S +H+D+ N L+
Sbjct: 83 TEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLV 138
Query: 475 DTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAFG 531
+ K+++F L+R E + VG+K + PE L S+K D++AFG
Sbjct: 139 NDQGVVKVSDFGLSRYVLDDE-----YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 193
Query: 532 VLMLEMLSGKEAP 544
VLM E+ S + P
Sbjct: 194 VLMWEIYSLGKMP 206
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 19/193 (9%)
Query: 362 GSVYRGKIGGDF-VAIKKVY-GDASD-----QIKLLNKINHSSLIRLLGICFNGGNWYLV 414
G V GK G + VAIK + G S+ + K++ ++H L++L G+C +++
Sbjct: 29 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 88
Query: 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
E NG L ++ + +F Q +++ DV + YL S +H+D+ N L+
Sbjct: 89 TEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLV 144
Query: 475 DTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAFG 531
+ K+++F L+R E + VG+K + PE L S+K D++AFG
Sbjct: 145 NDQGVVKVSDFGLSRYVLDDE-----YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 199
Query: 532 VLMLEMLSGKEAP 544
VLM E+ S + P
Sbjct: 200 VLMWEIYSLGKMP 212
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 49/272 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ A G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 425 VWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + ++++ I +A G+ YL S +H+D+
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAAR 186
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSF 245
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
GVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMDK------PANCT 285
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 114/262 (43%), Gaps = 45/262 (17%)
Query: 374 VAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
VAIK SD ++ + + +H +++L+G+ W ++ E G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 479
Query: 426 WINDKGGKF-LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIAN 484
++ + KF LD A I A ++T L YL S VH+DI NVL+ K+ +
Sbjct: 480 FLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGD 534
Query: 485 FALARPAERQEGEFALTSHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
F L+R E +++ +KG +MAPE + ++ DV+ FGV M E+L
Sbjct: 535 FGLSRYMED-------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
Query: 540 GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
P + N DV+ + E+GE R M P N PP + L+ C
Sbjct: 588 HGVKPFQGVKNN----DVIGRI---ENGE---RLPMPP----NCPPT----LYSLMTKCW 629
Query: 600 KKDPSGRPAMDKIAQSISRFLN 621
DPS RP ++ +S L
Sbjct: 630 AYDPSRRPRFTELKAQLSTILE 651
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 117
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIANF ++ P+ R+ +
Sbjct: 118 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR-------TT 167
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 209
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 210 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 361 KGSVYRGKIGGDFVAIK----------KVYGDASDQIKLLNKINHSSLIRLLGICFNGGN 410
K V + ++ G VA+K V G +I+ L H +I+L + +
Sbjct: 31 KVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSD 90
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
++V E G L +I G LD + ++ + +G++Y H VH+D+K
Sbjct: 91 IFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHMV---VHRDLKPE 145
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVS-TKLDVYA 529
NVLLD AKIA+F L+ +GEF S G+ Y APE + L + ++D+++
Sbjct: 146 NVLLDAHMNAKIADFGLSNMM--SDGEFLRXS--CGSPNYAAPEVISGRLYAGPEVDIWS 201
Query: 530 FGVLMLEMLSG 540
GV++ +L G
Sbjct: 202 SGVILYALLCG 212
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 95 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV-IQL 149
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 150 VGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 205
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 206 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 259
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 260 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 618 RFLN 621
+ +
Sbjct: 306 KLIR 309
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ F+D + I L + GL + HS
Sbjct: 77 LYLVFE---------FLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 124
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 125 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 181
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 118
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIANF ++ P+ R+ +
Sbjct: 119 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR-------TT 168
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 210
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 211 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 142
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ YL S VH+D+ N +LD F K+A+F LAR + + E+ + G
Sbjct: 143 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGA 197
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 201
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ +L S VH+D+ N +LD F K+A+F LAR + + EF + G
Sbjct: 202 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGA 256
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 296
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 103 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 161
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ YL S VH+D+ N +LD F K+A+F LAR + + E+ + G
Sbjct: 162 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGA 216
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 217 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 256
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 76 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 134
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ YL S VH+D+ N +LD F K+A+F LAR + + E+ + G
Sbjct: 135 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGA 189
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 190 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 229
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++ + +H +++ L G+ G +V E NG+L ++ G+F Q + + +A
Sbjct: 97 IMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFT-VIQLVGMLRGIA 155
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ-EGEFALTSHIVGT 507
G+ YL +VH+D+ N+L++++ K+++F L+R E E + T +
Sbjct: 156 AGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPV 212
Query: 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ + APE ++ ++ DV+++G++M E++S E P
Sbjct: 213 R-WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 49/272 (18%)
Query: 374 VAIKKVYGDASD--------QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DA++ +++++ I H ++I LLG C G Y++ A G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 425 VWINDKGGKFLDWAQRIQ--------------IALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ + ++++ I +A G+ YL S +H+D+
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAAR 186
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAF 530
NVL+ + KIA+F LAR + T+ + K +MAPE L + + + + DV++F
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSF 245
Query: 531 GVLMLEM--LSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
GVLM E+ L G P + EE L+ ++G H MD P
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFKLL---------KEG-----HRMDK------PANCT 285
Query: 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620
+ ++ C PS RP ++ + + R L
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 35/200 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G VY R K+ G+ VA+KK+ D A +I LL ++NH ++++LL +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL--------DVATGLNYLHSFTNPPH 462
YLV+E +++ F+D + I L + GL + HS
Sbjct: 80 LYLVFE---------FLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV--- 127
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLV 521
+H+D+K N+L++T+ K+A+F LAR + H V T Y APE L
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY---XHEVVTLWYRAPEILLGCKYY 184
Query: 522 STKLDVYAFGVLMLEMLSGK 541
ST +D+++ G + EM++ +
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 142
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ YL S VH+D+ N +LD F K+A+F LAR + + E+ + G
Sbjct: 143 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGA 197
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 140
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ YL S VH+D+ N +LD F K+A+F LAR + + E+ + G
Sbjct: 141 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGA 195
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 235
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 119/244 (48%), Gaps = 32/244 (13%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G+AS ++ + +H ++IRL G+ +V E NGSL ++ +F Q
Sbjct: 95 GEAS----IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQL 149
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
+ + +A+G+ YL ++ VH+D+ N+L++++ K+++F L+R E + E A
Sbjct: 150 VGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAY 205
Query: 501 TSHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
T+ G K + +PE + ++ DV+++G+++ E++S E P Y E M DV
Sbjct: 206 TTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWE--MSNQDV 259
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
+ V +E R + P M + +L+ C +KD + RP ++I +
Sbjct: 260 IKAV------DEGYR--LPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 618 RFLN 621
+ +
Sbjct: 306 KLIR 309
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 81 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 139
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ YL S VH+D+ N +LD F K+A+F LAR + + E+ + G
Sbjct: 140 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGA 194
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 195 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 234
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 102 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 160
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ YL S VH+D+ N +LD F K+A+F LAR + + E+ + G
Sbjct: 161 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGA 215
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 216 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 255
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 141
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ YL S VH+D+ N +LD F K+A+F LAR + + E+ + G
Sbjct: 142 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGA 196
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 79 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 137
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ YL S VH+D+ N +LD F K+A+F LAR + + E+ + G
Sbjct: 138 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGA 192
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 140
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ +L S VH+D+ N +LD F K+A+F LAR + + EF + G
Sbjct: 141 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGA 195
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 235
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 142
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ +L S VH+D+ N +LD F K+A+F LAR + + EF + G
Sbjct: 143 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGA 197
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 143
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ +L S VH+D+ N +LD F K+A+F LAR + + EF + G
Sbjct: 144 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGA 198
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 238
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 116 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TE 165
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 207
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 208 ANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G + + K KF D +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-KLSKF-DEQRTATYIT 120
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 121 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TT 170
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 212
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 213 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 142
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ +L S VH+D+ N +LD F K+A+F LAR + + EF + G
Sbjct: 143 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGA 197
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGD-------FVAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 85 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 144
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 201
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R G + + +M PE
Sbjct: 202 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-GYYRKGGCAMLPVKWMPPEAFME 260
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 261 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 308
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 309 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 100/199 (50%), Gaps = 30/199 (15%)
Query: 362 GSVYRGK--IGGDFVAIKKV-YGD--ASDQIKLLNKINHSSLIRLLGICFNGGNW----- 411
G V++ K I G IK+V Y + A ++K L K++H +++ G C++G ++
Sbjct: 25 GQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDGFDYDPETS 83
Query: 412 ------------YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTN 459
++ E G+L WI + G+ LD +++ + G++Y+HS
Sbjct: 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS--- 140
Query: 460 PPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENG 519
+++D+K SN+ L + KI +F L + + +G+ + GT YM+PE + +
Sbjct: 141 KKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRXRSK---GTLRYMSPEQISSQ 196
Query: 520 LVSTKLDVYAFGVLMLEML 538
++D+YA G+++ E+L
Sbjct: 197 DYGKEVDLYALGLILAELL 215
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 89 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 147
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ +L S VH+D+ N +LD F K+A+F LAR + + EF + G
Sbjct: 148 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGA 202
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 203 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 242
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 143
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ +L S VH+D+ N +LD F K+A+F LAR + + EF + G
Sbjct: 144 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMLDKEFDSVHNKTGA 198
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 238
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 128/304 (42%), Gaps = 58/304 (19%)
Query: 333 SDIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKK-------------- 378
++A K ++ Q A +DF I + +GK G ++A +K
Sbjct: 15 EELASKQKNEESKKRQWALEDFE----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKA 70
Query: 379 ------VYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432
V ++++ + + H +++RL G + YL+ E A G++ + K
Sbjct: 71 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLS 129
Query: 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARP 490
KF D + ++A L+Y HS +H+DIK N+LL + KIA+F ++ P
Sbjct: 130 KF-DEQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAP 185
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE 550
+ R++ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 186 SSRRDD-------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--------- 229
Query: 551 NMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMD 610
P +E+ + + ++ +P LI LK +PS RP +
Sbjct: 230 ---------PPFEANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 278
Query: 611 KIAQ 614
++ +
Sbjct: 279 EVLE 282
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 115/279 (41%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGDF-------VAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K+NH +++R +G+
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSL 118
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 175
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R ++ K +M PE
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME 234
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 235 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 282
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 283 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 115/279 (41%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGDF-------VAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K+NH +++R +G+
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSL 104
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 161
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R ++ K +M PE
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME 220
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 221 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 268
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 269 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 394 NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNY 453
NH L +L CF + VNG ++ K +F D A+ A ++ + L +
Sbjct: 82 NHPFLTQLF-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRF-DEARARFYAAEIISALMF 139
Query: 454 LHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG--EFALTSHIVGTKGYM 511
LH + +++D+K NVLLD + K+A+F + + EG T+ GT Y+
Sbjct: 140 LH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK-----EGICNGVTTATFCGTPDYI 191
Query: 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN-----PVLHKED 566
APE L+ L +D +A GVL+ EML G AP E+ L +LN P ED
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCG-HAPFEAENEDDLFEAILNDEVVYPTWLHED 250
Query: 567 GEESLRHLM--DPSMQ 580
L+ M +P+M+
Sbjct: 251 ATGILKSFMTKNPTMR 266
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 372 DFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431
D ++ + D ++ ++ ++H +LIRL G+ +V E A GSL +
Sbjct: 51 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ 109
Query: 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA 491
G FL + A+ VA G+ YL S +H+D+ N+LL T KI +F L R
Sbjct: 110 GHFL-LGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ + + + H + APE L+ S D + FGV + EM + + P
Sbjct: 166 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 372 DFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431
D ++ + D ++ ++ ++H +LIRL G+ +V E A GSL +
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ 115
Query: 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA 491
G FL + A+ VA G+ YL S +H+D+ N+LL T KI +F L R
Sbjct: 116 GHFL-LGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ + + + H + APE L+ S D + FGV + EM + + P
Sbjct: 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 372 DFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431
D ++ + D ++ ++ ++H +LIRL G+ +V E A GSL +
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ 105
Query: 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA 491
G FL + A+ VA G+ YL S +H+D+ N+LL T KI +F L R
Sbjct: 106 GHFL-LGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ + + + H + APE L+ S D + FGV + EM + + P
Sbjct: 162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 38/261 (14%)
Query: 371 GDFVAIKKVYGDASDQ--------IKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVN 420
G+ VA+K + D Q I +L + H +I+ G C + G + LV E
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 421 GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA 480
GSL ++ + AQ + A + G+ YLHS ++H+++ NVLLD D
Sbjct: 103 GSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLV 156
Query: 481 KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEML-- 538
KI +F LA+ + + + APE L+ DV++FGV + E+L
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 216
Query: 539 --SGKEAPALYSE-----ENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591
S + P + E + + V L +L E GE R P V
Sbjct: 217 CDSSQSPPTKFLELIGIAQGQMTVLRLTELL--ERGERLPR-----------PDKCPCEV 263
Query: 592 IRLIESCLKKDPSGRPAMDKI 612
L+++C + + S RP + +
Sbjct: 264 YHLMKNCWETEASFRPTFENL 284
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGD-------FVAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 62 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 121
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 122 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 178
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R G + + +M PE
Sbjct: 179 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-GYYRKGGCAMLPVKWMPPEAFME 237
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 238 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 285
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 286 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 116
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R++
Sbjct: 117 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT------- 166
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 208
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 209 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 116 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TD 165
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 207
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 208 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 116
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 117 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TD 166
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 208
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 209 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 372 DFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431
D ++ + D ++ ++ ++H +LIRL G+ +V E A GSL +
Sbjct: 51 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ 109
Query: 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA 491
G FL + A+ VA G+ YL S +H+D+ N+LL T KI +F L R
Sbjct: 110 GHFL-LGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ + + + H + APE L+ S D + FGV + EM + + P
Sbjct: 166 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 118
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R++
Sbjct: 119 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD------- 168
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 210
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 211 ANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 372 DFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431
D ++ + D ++ ++ ++H +LIRL G+ +V E A GSL +
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ 105
Query: 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA 491
G FL + A+ VA G+ YL S +H+D+ N+LL T KI +F L R
Sbjct: 106 GHFL-LGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ + + + H + APE L+ S D + FGV + EM + + P
Sbjct: 162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 116 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TT 165
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 207
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 208 ANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGDF-------VAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 118
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 119 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 175
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R ++ K +M PE
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME 234
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 235 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 282
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 283 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 128/304 (42%), Gaps = 58/304 (19%)
Query: 333 SDIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKK-------------- 378
++A K ++ Q A +DF I + +GK G ++A +K
Sbjct: 15 EELASKQKNEESKKRQWALEDFE----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKA 70
Query: 379 ------VYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432
V ++++ + + H +++RL G + YL+ E A G++ + K
Sbjct: 71 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLS 129
Query: 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARP 490
KF D + ++A L+Y HS +H+DIK N+LL + KIA+F ++ P
Sbjct: 130 KF-DEQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAP 185
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE 550
+ R+ + + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 186 SSRR-------TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--------- 229
Query: 551 NMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMD 610
P +E+ + + ++ +P LI LK +PS RP +
Sbjct: 230 ---------PPFEANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 278
Query: 611 KIAQ 614
++ +
Sbjct: 279 EVLE 282
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 116 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TD 165
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 207
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 208 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G + + K KF D +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-KLSKF-DEQRTATYIT 120
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+
Sbjct: 121 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------XX 170
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 171 LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 212
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 213 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 120
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 121 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TD 170
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 212
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 213 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 118
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 119 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TT 168
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 210
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 211 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++ +H +++ LLGIC G+ +V +G L +I ++ I L V
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQV 141
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
A G+ YL S VH+D+ N +LD F K+A+F LAR + + E + G
Sbjct: 142 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEXXSVHNKTGA 196
Query: 508 K---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
K +MA E L+ +TK DV++FGVL+ E+++ P
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 236
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGDF-------VAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 104
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 161
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R ++ K +M PE
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME 220
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 221 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 268
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 269 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGDF-------VAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 36 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 95
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 96 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 152
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R ++ K +M PE
Sbjct: 153 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME 211
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 212 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 259
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 260 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 128/304 (42%), Gaps = 58/304 (19%)
Query: 333 SDIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKK-------------- 378
++A K ++ Q A +DF I + +GK G ++A +K
Sbjct: 6 EELASKQKNEESKKRQWALEDFE----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKA 61
Query: 379 ------VYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432
V ++++ + + H +++RL G + YL+ E A G++ + K
Sbjct: 62 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLS 120
Query: 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARP 490
KF D + ++A L+Y HS +H+DIK N+LL + KIA+F ++ P
Sbjct: 121 KF-DEQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAP 176
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE 550
+ R+ + + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 177 SSRR-------TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--------- 220
Query: 551 NMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMD 610
P +E+ + + ++ +P LI LK +PS RP +
Sbjct: 221 ---------PPFEANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 269
Query: 611 KIAQ 614
++ +
Sbjct: 270 EVLE 273
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 116 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TX 165
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 207
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 208 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGD-------FVAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 61 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 120
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 121 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 177
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R ++ K +M PE
Sbjct: 178 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME 236
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 237 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 284
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 285 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 118
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+
Sbjct: 119 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA------- 168
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 210
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 211 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 120
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 121 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TT 170
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 212
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 213 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 28/200 (14%)
Query: 362 GSVYRG---KIGGDFVAIKKVYGDASDQ------------IKLLNKINHSSLIRLLGICF 406
G V++ K GG FVA+K+V ++ ++ L H +++RL +C
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 407 -----NGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPP 461
LV+E+ V+ L+ +++ + + + GL++LHS
Sbjct: 85 VSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-- 141
Query: 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLV 521
VH+D+K N+L+ + + K+A+F LAR Q ALTS +V T Y APE L
Sbjct: 142 -VHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTS-VVVTLWYRAPEVLLQSSY 196
Query: 522 STKLDVYAFGVLMLEMLSGK 541
+T +D+++ G + EM K
Sbjct: 197 ATPVDLWSVGCIFAEMFRRK 216
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 118
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 119 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TT 168
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 210
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 211 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGDF-------VAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 103
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 104 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 160
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R ++ K +M PE
Sbjct: 161 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME 219
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 220 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 267
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 268 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGD-------FVAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 51 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 110
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 111 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 167
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R ++ K +M PE
Sbjct: 168 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME 226
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 227 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 274
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 275 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 119
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 120 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TT 169
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 211
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 212 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGDF-------VAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 103
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 160
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R ++ K +M PE
Sbjct: 161 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME 219
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 220 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 267
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 268 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQI- 443
++I L + H ++++ LG G + E GSLS + K G D Q I
Sbjct: 68 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 127
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-DFRAKIANFALARPAERQEGEFALTS 502
+ GL YLH + VH+DIK NVL++T KI++F ++ R G T
Sbjct: 128 TKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTE 181
Query: 503 HIVGTKGYMAPEYLENGL--VSTKLDVYAFGVLMLEMLSGKEAPALYS 548
GT YMAPE ++ G D+++ G ++EM +GK P Y
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK--PPFYE 227
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 112
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 113 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TT 162
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 204
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 205 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 388 KLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++L ++ + L CF + VNG ++ + GKF + Q + A ++
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE-PQAVFYAAEI 129
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
+ GL +LH +++D+K NV+LD++ KIA+F + + +G T GT
Sbjct: 130 SIGLFFLHKRGI---IYRDLKLDNVMLDSEGHIKIADFGMCK-EHMMDG--VTTREFCGT 183
Query: 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG 567
Y+APE + +D +A+GVL+ EML+G+ P ED
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ------------------PPFDGEDE 225
Query: 568 EESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
+E + +M+ ++ +YP + + + + + K P+ R
Sbjct: 226 DELFQSIMEHNV--SYPKSLSKEAVSICKGLMTKHPAKR 262
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+
Sbjct: 116 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA------- 165
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 207
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 208 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 117/272 (43%), Gaps = 21/272 (7%)
Query: 367 GKIGGDFVAIKKVYGDASDQ-------IKLLNKINHSSLIRLLGICFNGG--NWYLVYEN 417
G G VA+K++ DQ I++L ++ +++ G+ + G + LV E
Sbjct: 48 GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
+G L ++ + LD ++ + + + G+ YL S VH+D+ N+L++++
Sbjct: 108 LPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVESE 163
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
KIA+F LA+ + + + + APE L + + S + DV++FGV++ E+
Sbjct: 164 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
Query: 538 LSGKEAPALYSEE--NMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLI 595
+ + S E M+ + P L + + P+ PP V L+
Sbjct: 224 FTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRL-PA-----PPACPAEVHELM 277
Query: 596 ESCLKKDPSGRPAMDKIAQSISRFLNASLAWE 627
+ C P RP+ + + + S E
Sbjct: 278 KLCWAPSPQDRPSFSALGPQLDMLWSGSRGCE 309
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 114
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 115 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TT 164
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 206
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 207 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGD-------FVAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 71 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 130
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 131 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 187
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R ++ K +M PE
Sbjct: 188 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME 246
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 247 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 294
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 295 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 117
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+
Sbjct: 118 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------XX 167
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 209
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 210 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 38/261 (14%)
Query: 371 GDFVAIKKVYGDASDQ--------IKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVN 420
G+ VA+K + D Q I +L + H +I+ G C + G + LV E
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 421 GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA 480
GSL ++ + AQ + A + G+ YLH+ ++H+++ NVLLD D
Sbjct: 103 GSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLV 156
Query: 481 KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEML-- 538
KI +F LA+ + + + APE L+ DV++FGV + E+L
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 216
Query: 539 --SGKEAPALYSE-----ENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591
S + P + E + + V L +L E GE R P V
Sbjct: 217 CDSSQSPPTKFLELIGIAQGQMTVLRLTELL--ERGERLPR-----------PDKCPCEV 263
Query: 592 IRLIESCLKKDPSGRPAMDKI 612
L+++C + + S RP + +
Sbjct: 264 YHLMKNCWETEASFRPTFENL 284
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 33/243 (13%)
Query: 322 DEESRDFLESISDIAQSLKVYT-FEEL-QAATDDFNPSCWIKGSVYRGK--IGGDFVAIK 377
DEE + L SI + K YT FE++ Q A+ G+VY G VAI+
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGAS----------GTVYTAMDVATGQEVAIR 51
Query: 378 KVYGDAS-------DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430
++ ++I ++ + + +++ L G ++V E GSL+ + +
Sbjct: 52 QMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET 111
Query: 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490
+D Q + + L +LHS +H+DIK N+LL D K+ +F
Sbjct: 112 ---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE 550
++ + S +VGT +MAPE + K+D+++ G++ +EM+ G E P Y E
Sbjct: 166 ITPEQSK---RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG-EPP--YLNE 219
Query: 551 NML 553
N L
Sbjct: 220 NPL 222
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 116
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA--RPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F + P+ R+ +
Sbjct: 117 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR-------TT 166
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 208
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 209 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 117/272 (43%), Gaps = 21/272 (7%)
Query: 367 GKIGGDFVAIKKVYGDASDQ-------IKLLNKINHSSLIRLLGICFNGG--NWYLVYEN 417
G G VA+K++ DQ I++L ++ +++ G+ + G + LV E
Sbjct: 36 GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 95
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
+G L ++ + LD ++ + + + G+ YL S VH+D+ N+L++++
Sbjct: 96 LPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVESE 151
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
KIA+F LA+ + + + + APE L + + S + DV++FGV++ E+
Sbjct: 152 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
Query: 538 LSGKEAPALYSEE--NMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLI 595
+ + S E M+ + P L + + P+ PP V L+
Sbjct: 212 FTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRL-PA-----PPACPAEVHELM 265
Query: 596 ESCLKKDPSGRPAMDKIAQSISRFLNASLAWE 627
+ C P RP+ + + + S E
Sbjct: 266 KLCWAPSPQDRPSFSALGPQLDMLWSGSRGCE 297
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 28/200 (14%)
Query: 362 GSVYRG---KIGGDFVAIKKVYGDASDQ------------IKLLNKINHSSLIRLLGICF 406
G V++ K GG FVA+K+V ++ ++ L H +++RL +C
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 407 -----NGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPP 461
LV+E+ V+ L+ +++ + + + GL++LHS
Sbjct: 85 VSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-- 141
Query: 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLV 521
VH+D+K N+L+ + + K+A+F LAR Q ALTS +V T Y APE L
Sbjct: 142 -VHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTS-VVVTLWYRAPEVLLQSSY 196
Query: 522 STKLDVYAFGVLMLEMLSGK 541
+T +D+++ G + EM K
Sbjct: 197 ATPVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 28/200 (14%)
Query: 362 GSVYRG---KIGGDFVAIKKVYGDASDQ------------IKLLNKINHSSLIRLLGICF 406
G V++ K GG FVA+K+V ++ ++ L H +++RL +C
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 407 -----NGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPP 461
LV+E+ V+ L+ +++ + + + GL++LHS
Sbjct: 85 VSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-- 141
Query: 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLV 521
VH+D+K N+L+ + + K+A+F LAR Q ALTS +V T Y APE L
Sbjct: 142 -VHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTS-VVVTLWYRAPEVLLQSSY 196
Query: 522 STKLDVYAFGVLMLEMLSGK 541
+T +D+++ G + EM K
Sbjct: 197 ATPVDLWSVGCIFAEMFRRK 216
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQI- 443
++I L + H ++++ LG G + E GSLS + K G D Q I
Sbjct: 54 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 113
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-DFRAKIANFALARPAERQEGEFALTS 502
+ GL YLH + VH+DIK NVL++T KI++F ++ R G T
Sbjct: 114 TKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTE 167
Query: 503 HIVGTKGYMAPEYLENGL--VSTKLDVYAFGVLMLEMLSGKEAPALYS 548
GT YMAPE ++ G D+++ G ++EM +GK P Y
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK--PPFYE 213
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGDF-------VAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSL 118
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 175
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +AR R ++ K +M PE
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME 234
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 235 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 282
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 283 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
+++ ++ +H +++ + G ++V E G+L+ + ++ Q +
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVC 147
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
L V L+YLH N +H+DIK ++LL +D R K+++F + E +
Sbjct: 148 LSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK---EVPKRKXL 201
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSE 549
VGT +MAPE + T++D+++ G++++EM+ G+ P ++E
Sbjct: 202 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE--PPYFNE 244
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 374 VAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK 433
V +K+V +D+ +L+ + H +IR+ G + +++ + G L + K +
Sbjct: 45 VRLKQV-EHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQR 102
Query: 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAER 493
F + + A +V L YLHS +++D+K N+LLD + KI +F A+
Sbjct: 103 FPNPVAKF-YAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP- 157
Query: 494 QEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG----KEAPALYSE 549
+T + GT Y+APE + + +D ++FG+L+ EML+G ++ + +
Sbjct: 158 -----DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY 212
Query: 550 ENMLLVDVLNPVLHKEDGEESLRHLM 575
E +L ++ P ED ++ L L+
Sbjct: 213 EKILNAELRFPPFFNEDVKDLLSRLI 238
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 117/272 (43%), Gaps = 21/272 (7%)
Query: 367 GKIGGDFVAIKKVYGDASDQ-------IKLLNKINHSSLIRLLGICFNGG--NWYLVYEN 417
G G VA+K++ DQ I++L ++ +++ G+ + G + LV E
Sbjct: 35 GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 94
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
+G L ++ + LD ++ + + + G+ YL S VH+D+ N+L++++
Sbjct: 95 LPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVESE 150
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
KIA+F LA+ + + + + APE L + + S + DV++FGV++ E+
Sbjct: 151 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
Query: 538 LSGKEAPALYSEE--NMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLI 595
+ + S E M+ + P L + + P+ PP V L+
Sbjct: 211 FTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRL-PA-----PPACPAEVHELM 264
Query: 596 ESCLKKDPSGRPAMDKIAQSISRFLNASLAWE 627
+ C P RP+ + + + S E
Sbjct: 265 KLCWAPSPQDRPSFSALGPQLDMLWSGSRGCE 296
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 118
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+
Sbjct: 119 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------XX 168
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 210
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 211 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+
Sbjct: 116 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------XX 165
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 207
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 208 ANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 372 DFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431
D ++ + D ++ ++ ++H +LIRL G+ +V E A GSL +
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ 105
Query: 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA 491
G FL + A+ VA G+ YL S +H+D+ N+LL T KI +F L R
Sbjct: 106 GHFL-LGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ + + H + APE L+ S D + FGV + EM + + P
Sbjct: 162 PQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 33/243 (13%)
Query: 322 DEESRDFLESISDIAQSLKVYT-FEEL-QAATDDFNPSCWIKGSVYRGK--IGGDFVAIK 377
DEE + L SI + K YT FE++ Q A+ G+VY G VAI+
Sbjct: 3 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGAS----------GTVYTAMDVATGQEVAIR 52
Query: 378 KVYGDAS-------DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430
++ ++I ++ + + +++ L G ++V E GSL+ + +
Sbjct: 53 QMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET 112
Query: 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490
+D Q + + L +LHS +H+DIK N+LL D K+ +F
Sbjct: 113 ---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQ 166
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE 550
++ + S +VGT +MAPE + K+D+++ G++ +EM+ G E P Y E
Sbjct: 167 ITPEQSK---RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG-EPP--YLNE 220
Query: 551 NML 553
N L
Sbjct: 221 NPL 223
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 33/243 (13%)
Query: 322 DEESRDFLESISDIAQSLKVYT-FEEL-QAATDDFNPSCWIKGSVYRGK--IGGDFVAIK 377
DEE + L SI + K YT FE++ Q A+ G+VY G VAI+
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGAS----------GTVYTAMDVATGQEVAIR 51
Query: 378 KVYGDAS-------DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430
++ ++I ++ + + +++ L G ++V E GSL+ + +
Sbjct: 52 QMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET 111
Query: 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490
+D Q + + L +LHS +H+DIK N+LL D K+ +F
Sbjct: 112 ---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE 550
++ + S +VGT +MAPE + K+D+++ G++ +EM+ G E P Y E
Sbjct: 166 ITPEQSK---RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG-EPP--YLNE 219
Query: 551 NML 553
N L
Sbjct: 220 NPL 222
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 33/243 (13%)
Query: 322 DEESRDFLESISDIAQSLKVYT-FEEL-QAATDDFNPSCWIKGSVYRGK--IGGDFVAIK 377
DEE + L SI + K YT FE++ Q A+ G+VY G VAI+
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGAS----------GTVYTAMDVATGQEVAIR 51
Query: 378 KVYGDAS-------DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430
++ ++I ++ + + +++ L G ++V E GSL+ + +
Sbjct: 52 QMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET 111
Query: 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490
+D Q + + L +LHS +H+DIK N+LL D K+ +F
Sbjct: 112 ---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE 550
++ + S +VGT +MAPE + K+D+++ G++ +EM+ G E P Y E
Sbjct: 166 ITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG-EPP--YLNE 219
Query: 551 NML 553
N L
Sbjct: 220 NPL 222
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 43/212 (20%)
Query: 362 GSVYRGK--IGGDFVAIKKV-YGD--ASDQIKLLNKINHSSLIRLLGICFNGGNW----- 411
G V++ K I G I++V Y + A ++K L K++H +++ G C++G ++
Sbjct: 26 GQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDGFDYDPETS 84
Query: 412 -------------------------YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALD 446
++ E G+L WI + G+ LD +++
Sbjct: 85 DDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 144
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ G++Y+HS +H+D+K SN+ L + KI +F L + + +G+ + G
Sbjct: 145 ITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRTRSK---G 197
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEML 538
T YM+PE + + ++D+YA G+++ E+L
Sbjct: 198 TLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 120
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+ +
Sbjct: 121 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-------TT 170
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E K+D+++ GVL E L GK P
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK------------------PPFE 212
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+E+ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 213 ANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 372 DFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431
D ++ + D ++ ++ ++H +LIRL G+ +V E A GSL +
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ 115
Query: 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA 491
G FL + A+ VA G+ YL S +H+D+ N+LL T KI +F L R
Sbjct: 116 GHFL-LGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ + + H + APE L+ S D + FGV + EM + + P
Sbjct: 172 PQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 38/242 (15%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQ 439
D+ ++ ++H L+RLLG+C + LV + +G L ++++ L+W
Sbjct: 89 DEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC- 146
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+ YL VH+D+ NVL+ + KI +F LAR E E E+
Sbjct: 147 -----VQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 198
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS--GKEAPALYSEENMLLVDV 557
+ K +MA E + + + DV+++GV + E+++ GK + + E + D+
Sbjct: 199 ADGGKMPIK-WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPDL 254
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
L E GE + PP+ I V ++ C D RP ++A S
Sbjct: 255 L------EKGERLPQ-----------PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 297
Query: 618 RF 619
R
Sbjct: 298 RM 299
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 25/229 (10%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++ ++H +++L+GI W ++ E G L ++ ++ L + +L +
Sbjct: 78 IMKNLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQIC 135
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
+ YL S VH+DI N+L+ + K+ +F L+R E ++ A + +
Sbjct: 136 KAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PI 190
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE 568
+M+PE + +T DV+ F V M E+LS + P + E DV+ VL K D
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIG-VLEKGD-- 243
Query: 569 ESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
L P + PPV L+ R C DPS RP ++ S+S
Sbjct: 244 ----RLPKPDLC---PPVLYTLMTR----CWDYDPSDRPRFTELVCSLS 281
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 39/185 (21%)
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT- 501
I ++ GL+YLHS +H+DIK +NVLL K+A+F +A G+ T
Sbjct: 121 ILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA-------GQLTDTQ 170
Query: 502 ---SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP--ALYSEENMLLVD 556
+ VGT +MAPE ++ K D+++ G+ +E+ G E P L+ + L+
Sbjct: 171 IKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG-EPPNSDLHPMRVLFLIP 229
Query: 557 VLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS- 615
+P P+++G + + +E+CL KDP RP ++ +
Sbjct: 230 KNSP----------------PTLEGQH----SKPFKEFVEACLNKDPRFRPTAKELLKHK 269
Query: 616 -ISRF 619
I+R+
Sbjct: 270 FITRY 274
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 25/229 (10%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++ ++H +++L+GI W ++ E G L ++ ++ L + +L +
Sbjct: 66 IMKNLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQIC 123
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
+ YL S VH+DI N+L+ + K+ +F L+R E ++ A + +
Sbjct: 124 KAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PI 178
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE 568
+M+PE + +T DV+ F V M E+LS + P + E DV+ VL K D
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIG-VLEKGD-- 231
Query: 569 ESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
L P + PPV L+ R C DPS RP ++ S+S
Sbjct: 232 ----RLPKPDLC---PPVLYTLMTR----CWDYDPSDRPRFTELVCSLS 269
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 37/273 (13%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWYL 413
G VY G K VA+K + D + + ++ +I H +L++LLG+C +Y+
Sbjct: 46 GEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYI 105
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
V E G+L ++ + + + + +A +++ + YL +H+D+ N L
Sbjct: 106 VTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 162
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTK---GYMAPEYLENGLVSTKLDVYAF 530
+ + K+A+F L+R G+ T+H G K + APE L S K DV+AF
Sbjct: 163 VGENHVVKVADFGLSR---LMTGD-TYTAH-AGAKFPIKWTAPESLAYNTFSIKSDVWAF 217
Query: 531 GVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590
GVL+ E+ A Y +D+ + L++ + P
Sbjct: 218 GVLLWEI-------ATYGMSPYPGIDL-----------SQVYDLLEKGYRMEQPEGCPPK 259
Query: 591 VIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
V L+ +C K P+ RP+ + Q+ + S
Sbjct: 260 VYELMRACWKWSPADRPSFAETHQAFETMFHDS 292
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 38/242 (15%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQ 439
D+ ++ ++H L+RLLG+C + LV + +G L ++++ L+W
Sbjct: 66 DEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC- 123
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+ YL VH+D+ NVL+ + KI +F LAR E E E+
Sbjct: 124 -----VQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 175
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS--GKEAPALYSEENMLLVDV 557
+ K +MA E + + + DV+++GV + E+++ GK + + E + D+
Sbjct: 176 ADGGKMPIK-WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPDL 231
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
L E GE + PP+ I V ++ C D RP ++A S
Sbjct: 232 L------EKGERLPQ-----------PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 274
Query: 618 RF 619
R
Sbjct: 275 RM 276
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
+L +NH +++L G YL+ + G L ++ K F + + +A ++A
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLA-ELA 140
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
GL++LHS +++D+K N+LLD + K+ +F L++ A E + GT
Sbjct: 141 LGLDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK---AYSFCGTV 194
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
YMAPE + S D +++GVLM EML+G
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 25/229 (10%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++ ++H +++L+GI W ++ E G L ++ ++ L + +L +
Sbjct: 62 IMKNLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQIC 119
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
+ YL S VH+DI N+L+ + K+ +F L+R E ++ A + +
Sbjct: 120 KAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PI 174
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE 568
+M+PE + +T DV+ F V M E+LS + P + E DV+ VL K D
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIG-VLEKGD-- 227
Query: 569 ESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
L P + PPV L+ R C DPS RP ++ S+S
Sbjct: 228 ----RLPKPDLC---PPVLYTLMTR----CWDYDPSDRPRFTELVCSLS 265
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 379 VYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWA 438
V G +I+ L H +I+L + ++++V E G L +I K G+ +
Sbjct: 54 VVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC-KHGRVEEME 112
Query: 439 QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF 498
R ++ + + ++Y H VH+D+K NVLLD AKIA+F L+ +GEF
Sbjct: 113 AR-RLFQQILSAVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEF 166
Query: 499 ALTSHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
TS G+ Y APE + L + ++D+++ GV++ +L G
Sbjct: 167 LRTS--CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K KF D +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ-KLSKF-DEQRTATYIT 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL + KIA+F ++ P+ R+
Sbjct: 116 ELANALSYCHSKKV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA------- 165
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + K+D+++ GVL E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------------------PPFE 207
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
+++ + + ++ +P LI LK +PS RP + ++ +
Sbjct: 208 ANTYQDTYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 45/257 (17%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR--- 440
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLY 141
Query: 441 ---------IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR-- 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 142 KDFLTLEHLIXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 490 ---PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPAL 546
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 199 XKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-- 250
Query: 547 YSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
Y + EE R L + + P T + + + C +PS R
Sbjct: 251 YPGVKI--------------DEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQR 295
Query: 607 PAMDKIAQSISRFLNAS 623
P ++ + + L A+
Sbjct: 296 PTFSELVEHLGNLLQAN 312
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 43/255 (16%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWA----- 438
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKD 139
Query: 439 -----QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---- 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 140 FLTLEHLIXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKIXDFGLARDIYK 196
Query: 490 -PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P Y
Sbjct: 197 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YP 248
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ EE R L + + P T + + + C +PS RP
Sbjct: 249 GVKI--------------DEEFXRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 293
Query: 609 MDKIAQSISRFLNAS 623
++ + + L A+
Sbjct: 294 FSELVEHLGNLLQAN 308
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 362 GSVYRGKIGGDF-------VAIKKVYGDASDQIKL--------LNKINHSSLIRLLGICF 406
G VY G++ G VA+K + S+Q +L ++K NH +++R +G+
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 104
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGK-----FLDWAQRIQIALDVATGLNYLHSFTNPP 461
+++ E G L ++ + + L + +A D+A G YL
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 161
Query: 462 HVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518
+H+DI N LL AKI +F +A+ R ++ K +M PE
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK-WMPPEAFME 220
Query: 519 GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578
G+ ++K D ++FGVL+ E+ S P S+ N +++ + G MDP
Sbjct: 221 GIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEVLEFVT-----SGGR------MDPP 268
Query: 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
P V R++ C + P RP I + I
Sbjct: 269 KNCPGP------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 104/246 (42%), Gaps = 38/246 (15%)
Query: 389 LLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQR------- 440
L+ +NH +++ L+GI G +++ +G L +F+ QR
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLL--------QFIRSPQRNPTVKDL 126
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA-ERQEGEFA 499
I L VA G+ YL VH+D+ N +LD F K+A+F LAR +R+
Sbjct: 127 ISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
H + A E L+ +TK DV++FGVL+ E+L+ P + ++
Sbjct: 184 QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH----------ID 233
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619
P L H + + P + ++++ C + DP+ RP + + +
Sbjct: 234 PF--------DLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
Query: 620 LNASLA 625
++A L
Sbjct: 286 VSALLG 291
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF------- 434
D + +LL + H +++ G+C +G +V+E +G L+ ++ G
Sbjct: 63 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 122
Query: 435 -------LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFAL 487
L +Q + IA +A+G+ YL S VH+D+ N L+ + KI +F +
Sbjct: 123 PRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGM 179
Query: 488 ARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+R + + + H + +M PE + +T+ DV++FGV++ E+ + + P
Sbjct: 180 SRDVYSTD-YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 115/275 (41%), Gaps = 48/275 (17%)
Query: 362 GSVYRGK--IGGDFVAIK--KVYGDASDQIK----LLNKINHSSLIRLLGICFNGGN--- 410
G VY+G+ G AIK V GD ++IK +L K +H I F N
Sbjct: 38 GQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97
Query: 411 ----WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKD 466
+LV E GS++ I + G L I ++ GL++LH +H+D
Sbjct: 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV---IHRD 154
Query: 467 IKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLE-----NGLV 521
IK NVLL + K+ +F ++ +R G + +GT +MAPE + +
Sbjct: 155 IKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEVIACDENPDATY 211
Query: 522 STKLDVYAFGVLMLEMLSGKEAPALYSEENM--LLVDVLNPVLHKEDGEESLRHLMDPSM 579
K D+++ G+ +EM G AP L M L + NP + + S +
Sbjct: 212 DFKSDLWSLGITAIEMAEG--APPLCDMHPMRALFLIPRNPAPRLKSKKWSKK------- 262
Query: 580 QGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614
IESCL K+ S RPA +++ +
Sbjct: 263 -----------FQSFIESCLVKNHSQRPATEQLMK 286
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 45/291 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASDQIKLLNKINHSSLIR---LLGICFNGGNWYLVYENA 418
G V+RGK G+ VA+K +I + ++R +LG ++ +N
Sbjct: 43 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG--------FIAADNK 94
Query: 419 VNGSLS-VW-IND--KGGKFLDWAQR--------IQIALDVATGLNYLH-----SFTNPP 461
NG+ + +W ++D + G D+ R I++AL A+GL +LH + P
Sbjct: 95 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 154
Query: 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT-SHIVGTKGYMAPEYLENGL 520
H+D+K N+L+ + IA+ LA + + +H VGTK YMAPE L++ +
Sbjct: 155 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 214
Query: 521 VS------TKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVL--NPV---LHKEDGEE 569
+ D+YA G++ E+ ++ + + D++ +P + K E+
Sbjct: 215 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ 274
Query: 570 SLRHLMDPSMQGNYPPVTAILVI-RLIESCLKKDPSGRPAMDKIAQSISRF 619
LR P++ + A+ V+ +++ C + + R +I +++S+
Sbjct: 275 KLR----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 321
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 45/291 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASDQIKLLNKINHSSLIR---LLGICFNGGNWYLVYENA 418
G V+RGK G+ VA+K +I + ++R +LG ++ +N
Sbjct: 18 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG--------FIAADNK 69
Query: 419 VNGSLS-VW-IND--KGGKFLDWAQR--------IQIALDVATGLNYLH-----SFTNPP 461
NG+ + +W ++D + G D+ R I++AL A+GL +LH + P
Sbjct: 70 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 129
Query: 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT-SHIVGTKGYMAPEYLENGL 520
H+D+K N+L+ + IA+ LA + + +H VGTK YMAPE L++ +
Sbjct: 130 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 189
Query: 521 VS------TKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVL--NPV---LHKEDGEE 569
+ D+YA G++ E+ ++ + + D++ +P + K E+
Sbjct: 190 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ 249
Query: 570 SLRHLMDPSMQGNYPPVTAILVI-RLIESCLKKDPSGRPAMDKIAQSISRF 619
LR P++ + A+ V+ +++ C + + R +I +++S+
Sbjct: 250 KLR----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 296
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 384 SDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQI 443
S++ LL + H L+ L Y V + +NG + + FL+ R
Sbjct: 87 SERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD-YINGGELFYHLQRERCFLEPRARF-Y 144
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH 503
A ++A+ L YLHS V++D+K N+LLD+ + +F L + E E + TS
Sbjct: 145 AAEIASALGYLHSLNI---VYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHN-STTST 198
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD-VLN-PV 561
GT Y+APE L +D + G ++ EML G P YS + D +LN P+
Sbjct: 199 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRNTAEMYDNILNKPL 256
Query: 562 LHKEDGEESLRHLMDPSMQGN 582
K + S RHL++ +Q +
Sbjct: 257 QLKPNITNSARHLLEGLLQKD 277
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 45/291 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASDQIKLLNKINHSSLIR---LLGICFNGGNWYLVYENA 418
G V+RGK G+ VA+K +I + ++R +LG ++ +N
Sbjct: 56 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG--------FIAADNK 107
Query: 419 VNGSLS-VW-IND--KGGKFLDWAQR--------IQIALDVATGLNYLH-----SFTNPP 461
NG+ + +W ++D + G D+ R I++AL A+GL +LH + P
Sbjct: 108 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 167
Query: 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT-SHIVGTKGYMAPEYLENGL 520
H+D+K N+L+ + IA+ LA + + +H VGTK YMAPE L++ +
Sbjct: 168 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 227
Query: 521 VS------TKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVL--NPV---LHKEDGEE 569
+ D+YA G++ E+ ++ + + D++ +P + K E+
Sbjct: 228 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ 287
Query: 570 SLRHLMDPSMQGNYPPVTAILVI-RLIESCLKKDPSGRPAMDKIAQSISRF 619
LR P++ + A+ V+ +++ C + + R +I +++S+
Sbjct: 288 KLR----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 43/255 (16%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWA----- 438
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKD 139
Query: 439 -----QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---- 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 140 FLTLEHLICYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIYK 196
Query: 490 -PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P Y
Sbjct: 197 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YP 248
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ EE R L + + P T + + + C +PS RP
Sbjct: 249 GVKI--------------DEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 293
Query: 609 MDKIAQSISRFLNAS 623
++ + + L A+
Sbjct: 294 FSELVEHLGNLLQAN 308
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 45/291 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASDQIKLLNKINHSSLIR---LLGICFNGGNWYLVYENA 418
G V+RGK G+ VA+K +I + ++R +LG ++ +N
Sbjct: 23 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG--------FIAADNK 74
Query: 419 VNGSLS-VW-IND--KGGKFLDWAQR--------IQIALDVATGLNYLH-----SFTNPP 461
NG+ + +W ++D + G D+ R I++AL A+GL +LH + P
Sbjct: 75 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 134
Query: 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT-SHIVGTKGYMAPEYLENGL 520
H+D+K N+L+ + IA+ LA + + +H VGTK YMAPE L++ +
Sbjct: 135 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 194
Query: 521 VS------TKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVL--NPV---LHKEDGEE 569
+ D+YA G++ E+ ++ + + D++ +P + K E+
Sbjct: 195 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ 254
Query: 570 SLRHLMDPSMQGNYPPVTAILVI-RLIESCLKKDPSGRPAMDKIAQSISRF 619
LR P++ + A+ V+ +++ C + + R +I +++S+
Sbjct: 255 KLR----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 301
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 45/291 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASDQIKLLNKINHSSLIR---LLGICFNGGNWYLVYENA 418
G V+RGK G+ VA+K +I + ++R +LG ++ +N
Sbjct: 20 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG--------FIAADNK 71
Query: 419 VNGSLS-VW-IND--KGGKFLDWAQR--------IQIALDVATGLNYLH-----SFTNPP 461
NG+ + +W ++D + G D+ R I++AL A+GL +LH + P
Sbjct: 72 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 131
Query: 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT-SHIVGTKGYMAPEYLENGL 520
H+D+K N+L+ + IA+ LA + + +H VGTK YMAPE L++ +
Sbjct: 132 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 191
Query: 521 VS------TKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVL--NPV---LHKEDGEE 569
+ D+YA G++ E+ ++ + + D++ +P + K E+
Sbjct: 192 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ 251
Query: 570 SLRHLMDPSMQGNYPPVTAILVI-RLIESCLKKDPSGRPAMDKIAQSISRF 619
LR P++ + A+ V+ +++ C + + R +I +++S+
Sbjct: 252 KLR----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 298
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 45/291 (15%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASDQIKLLNKINHSSLIR---LLGICFNGGNWYLVYENA 418
G V+RGK G+ VA+K +I + ++R +LG ++ +N
Sbjct: 17 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG--------FIAADNK 68
Query: 419 VNGSLS-VW-IND--KGGKFLDWAQR--------IQIALDVATGLNYLH-----SFTNPP 461
NG+ + +W ++D + G D+ R I++AL A+GL +LH + P
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 128
Query: 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT-SHIVGTKGYMAPEYLENGL 520
H+D+K N+L+ + IA+ LA + + +H VGTK YMAPE L++ +
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 188
Query: 521 VS------TKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVL--NPV---LHKEDGEE 569
+ D+YA G++ E+ ++ + + D++ +P + K E+
Sbjct: 189 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ 248
Query: 570 SLRHLMDPSMQGNYPPVTAILVI-RLIESCLKKDPSGRPAMDKIAQSISRF 619
LR P++ + A+ V+ +++ C + + R +I +++S+
Sbjct: 249 KLR----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 104/259 (40%), Gaps = 45/259 (17%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF------- 434
D + +LL + H ++R G+C G +V+E +G L+ ++ G
Sbjct: 89 DFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 148
Query: 435 ------LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
L Q + +A VA G+ YL VH+D+ N L+ KI +F ++
Sbjct: 149 DVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMS 205
Query: 489 RPAERQEGEFALTSHIVGTK-----GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEA 543
R ++ + VG + +M PE + +T+ DV++FGV++ E+ + +
Sbjct: 206 RDI------YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259
Query: 544 PALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDP 603
P Y N +D + G E R P P V AI+ C +++P
Sbjct: 260 P-WYQLSNTEAIDCIT------QGRELERPRACP------PEVYAIM-----RGCWQREP 301
Query: 604 SGRPAMDKIAQSISRFLNA 622
R ++ + + A
Sbjct: 302 QQRHSIKDVHARLQALAQA 320
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 24/191 (12%)
Query: 373 FVAIKKVYGDASD--------QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K + DASD + +LL + H +++ G+C G +V+E +G L+
Sbjct: 45 LVAVKTL-KDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 103
Query: 425 VWINDKGGKF-----------LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
++ G L +Q + IA +A G+ YL S VH+D+ N L
Sbjct: 104 KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCL 160
Query: 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 533
+ + KI +F ++R + + + H + +M PE + +T+ DV++ GV+
Sbjct: 161 VGENLLVKIGDFGMSRDVYSTD-YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 219
Query: 534 MLEMLSGKEAP 544
+ E+ + + P
Sbjct: 220 LWEIFTYGKQP 230
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGN--WYLVYENAVNGSLSVWIND--KGGKFLDWAQRI 441
++ LL ++ H +++R + N Y+V E G L+ I K ++LD +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 442 QIALDVATGLNYLHSFTNPPH--VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
++ + L H ++ H +H+D+K +NV LD K+ +F LAR E +FA
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE-DFA 173
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
VGT YM+PE + + K D+++ G L+ E+
Sbjct: 174 --KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 25/161 (15%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
++ + L+YLHS N V++D+K N++LD D KI +F L + + + A
Sbjct: 256 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIK---DGATMKTFC 310
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE 565
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELI------- 361
Query: 566 DGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P L+ LKKDP R
Sbjct: 362 --------LME---EIRFPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 25/161 (15%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
++ + L+YLHS N V++D+K N++LD D KI +F L + + + A
Sbjct: 259 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIK---DGATMKTFC 313
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE 565
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELI------- 364
Query: 566 DGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P L+ LKKDP R
Sbjct: 365 --------LME---EIRFPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 34/196 (17%)
Query: 374 VAIK--KVYGDASDQIKLLNKI-------NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424
VA+K K D+S++ L++++ +H +++ LLG C G YL++E G L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 425 VWINDKGGKF---------------------LDWAQRIQIALDVATGLNYLHSFTNPPHV 463
++ K KF L + + A VA G+ +L V
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCV 194
Query: 464 HKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVST 523
H+D+ NVL+ KI +F LAR + + + + +MAPE L G+ +
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDI-MSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 524 KLDVYAFGVLMLEMLS 539
K DV+++G+L+ E+ S
Sbjct: 254 KSDVWSYGILLWEIFS 269
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 25/161 (15%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
++ + L+YLHS N V++D+K N++LD D KI +F L + + + A
Sbjct: 116 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIK---DGATMKXFC 170
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE 565
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELI------- 221
Query: 566 DGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P L+ LKKDP R
Sbjct: 222 --------LME---EIRFPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 14/157 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K +F D +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSRF-DEQRTATYIT 119
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL ++ KIA+F ++ P+ R++
Sbjct: 120 ELANALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT------- 169
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+ PE +E + K+D+++ GVL E L G
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 21/182 (11%)
Query: 368 KIGGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSL---- 423
K D ++IK Y D ++++++ I + + GI N Y++YE N S+
Sbjct: 75 KSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFD 134
Query: 424 -SVWINDKGGKFLDWAQRIQ-IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481
++ DK Q I+ I V +Y+H+ N H+D+K SN+L+D + R K
Sbjct: 135 EYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI--CHRDVKPSNILMDKNGRVK 192
Query: 482 IANFALARPAERQEGEFALTSHIVGTKG---YMAPEYL--ENGLVSTKLDVYAFGVLMLE 536
+++F E E+ + I G++G +M PE+ E+ K+D+++ G+ +
Sbjct: 193 LSDFG--------ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYV 244
Query: 537 ML 538
M
Sbjct: 245 MF 246
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 21/268 (7%)
Query: 367 GKIGGDFVAIKKVYGDASDQ-------IKLLNKINHSSLIRLLGICFNGGN--WYLVYEN 417
G G VA+K++ DQ I++L ++ +++ G+ + G LV E
Sbjct: 32 GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEY 91
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
+G L ++ + LD ++ + + + G+ YL S VH+D+ N+L++++
Sbjct: 92 LPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVESE 147
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
KIA+F LA+ + + + APE L + + S + DV++FGV++ E+
Sbjct: 148 AHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
Query: 538 LSGKEAPALYSEE--NMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLI 595
+ + S E M+ + P L + + P+ PP V L+
Sbjct: 208 FTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRL-PA-----PPACPAEVHELM 261
Query: 596 ESCLKKDPSGRPAMDKIAQSISRFLNAS 623
+ C P RP+ + + + S
Sbjct: 262 KLCWAPSPQDRPSFSALGPQLDMLWSGS 289
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 25/161 (15%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
++ + L+YLHS N V++D+K N++LD D KI +F L + + + A
Sbjct: 117 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIK---DGATMKXFC 171
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE 565
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELI------- 222
Query: 566 DGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P L+ LKKDP R
Sbjct: 223 --------LME---EIRFPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 104/259 (40%), Gaps = 45/259 (17%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF------- 434
D + +LL + H ++R G+C G +V+E +G L+ ++ G
Sbjct: 60 DFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 119
Query: 435 ------LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
L Q + +A VA G+ YL VH+D+ N L+ KI +F ++
Sbjct: 120 DVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMS 176
Query: 489 RPAERQEGEFALTSHIVGTK-----GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEA 543
R ++ + VG + +M PE + +T+ DV++FGV++ E+ + +
Sbjct: 177 RDI------YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
Query: 544 PALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDP 603
P Y N +D + G E R P P V AI+ C +++P
Sbjct: 231 P-WYQLSNTEAIDCIT------QGRELERPRACP------PEVYAIM-----RGCWQREP 272
Query: 604 SGRPAMDKIAQSISRFLNA 622
R ++ + + A
Sbjct: 273 QQRHSIKDVHARLQALAQA 291
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 25/161 (15%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
++ + L+YLHS N V++D+K N++LD D KI +F L + + + A
Sbjct: 118 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIK---DGATMKXFC 172
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE 565
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELI------- 223
Query: 566 DGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P L+ LKKDP R
Sbjct: 224 --------LME---EIRFPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 104/259 (40%), Gaps = 45/259 (17%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF------- 434
D + +LL + H ++R G+C G +V+E +G L+ ++ G
Sbjct: 66 DFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 125
Query: 435 ------LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
L Q + +A VA G+ YL VH+D+ N L+ KI +F ++
Sbjct: 126 DVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMS 182
Query: 489 RPAERQEGEFALTSHIVGTK-----GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEA 543
R ++ + VG + +M PE + +T+ DV++FGV++ E+ + +
Sbjct: 183 RDI------YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
Query: 544 PALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDP 603
P Y N +D + G E R P P V AI+ C +++P
Sbjct: 237 P-WYQLSNTEAIDCIT------QGRELERPRACP------PEVYAIM-----RGCWQREP 278
Query: 604 SGRPAMDKIAQSISRFLNA 622
R ++ + + A
Sbjct: 279 QQRHSIKDVHARLQALAQA 297
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 46/258 (17%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWA----- 438
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 81 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDL 140
Query: 439 --------QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR- 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 490 ----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPA 545
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 198 IXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP- 250
Query: 546 LYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSG 605
Y + EE R L + + P T + + + C +PS
Sbjct: 251 -YPGVKI--------------DEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQ 294
Query: 606 RPAMDKIAQSISRFLNAS 623
RP ++ + + L A+
Sbjct: 295 RPTFSELVEHLGNLLQAN 312
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 47/259 (18%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR--- 440
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ + +
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPED 141
Query: 441 -----------IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 142 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 198
Query: 490 -----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 199 DIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
Query: 545 ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPS 604
Y + EE R L + + P T + + + C +PS
Sbjct: 253 --YPGVKI--------------DEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPS 295
Query: 605 GRPAMDKIAQSISRFLNAS 623
RP ++ + + L A+
Sbjct: 296 QRPTFSELVEHLGNLLQAN 314
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 14/157 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ + + H +++RL G + YL+ E A G++ + K +F D +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSRF-DEQRTATYIT 119
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y HS +H+DIK N+LL ++ KIA+F ++ P+ R+ +
Sbjct: 120 ELANALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR-------TT 169
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+ PE +E + K+D+++ GVL E L G
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 130/321 (40%), Gaps = 54/321 (16%)
Query: 323 EESRDFLESISDIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGD 382
E R+ +E + DI + F+ + P + + + + D A D
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA------D 96
Query: 383 ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW---------------- 426
+ L+ + ++ ++++LLG+C G L++E G L+ +
Sbjct: 97 FQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD 156
Query: 427 ------INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA 480
++ G L A+++ IA VA G+ YL + VH+D+ N L+ +
Sbjct: 157 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVV 213
Query: 481 KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
KIA+F L+R + A + + + +M PE + +T+ DV+A+GV++ E+ S
Sbjct: 214 KIADFGLSRNIYSADYYKADGNDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLWEIFSY 272
Query: 541 KEAP--ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESC 598
P + EE + V N + E+ L +LM RL C
Sbjct: 273 GLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLM-----------------RL---C 312
Query: 599 LKKDPSGRPAMDKIAQSISRF 619
K P+ RP+ I + + R
Sbjct: 313 WSKLPADRPSFCSIHRILQRM 333
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 47/259 (18%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWA----- 438
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 439 ---------QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 490 -----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 197 DIYKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 545 ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPS 604
Y + EE R L + + P T + + + C +PS
Sbjct: 251 --YPGVKI--------------DEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPS 293
Query: 605 GRPAMDKIAQSISRFLNAS 623
RP ++ + + L A+
Sbjct: 294 QRPTFSELVEHLGNLLQAN 312
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 133 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 41/247 (16%)
Query: 371 GDFVAIKKVYGDASDQIKLL-NKI------NHSSLIRLLGICFNGGNWYLVYENAVNGSL 423
G VA+KK+ + +LL N++ H +++ + G ++V E G+L
Sbjct: 176 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235
Query: 424 SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIA 483
+ + ++ Q + L V L+ LH+ +H+DIK ++LL D R K++
Sbjct: 236 TDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLS 289
Query: 484 NFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEA 543
+F + E +VGT +MAPE + ++D+++ G++++EM+ G+
Sbjct: 290 DFGFCAQVSK---EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE-- 344
Query: 544 PALYSEENM----LLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
P ++E + ++ D L P L H + PS++G ++ L
Sbjct: 345 PPYFNEPPLKAMKMIRDNLPPRLKN-------LHKVSPSLKG------------FLDRLL 385
Query: 600 KKDPSGR 606
+DP+ R
Sbjct: 386 VRDPAQR 392
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 110/261 (42%), Gaps = 45/261 (17%)
Query: 362 GSVY--RGKIGGDFVAIKKV----------YGDASDQIKLLNKINHSSLIRLLGICFNGG 409
G+VY R + VAIKK+ + D +++ L K+ H + I+ G
Sbjct: 68 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 127
Query: 410 NWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKC 469
+LV E + GS S + + K L + + GL YLHS +H+D+K
Sbjct: 128 TAWLVMEYCL-GSASDLL-EVHKKPLQEVEIAAVTHGALQGLAYLHSHNM---IHRDVKA 182
Query: 470 SNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEY---LENGLVSTKLD 526
N+LL K+ +F A A + VGT +MAPE ++ G K+D
Sbjct: 183 GNILLSEPGLVKLGDFGSA-------SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVD 235
Query: 527 VYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586
V++ G+ +E+ K P L+ NM + L + E P++Q +
Sbjct: 236 VWSLGITCIELAERK--PPLF---NMNAMSALYHIAQNE----------SPALQSGH--- 277
Query: 587 TAILVIRLIESCLKKDPSGRP 607
+ ++SCL+K P RP
Sbjct: 278 WSEYFRNFVDSCLQKIPQDRP 298
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 47/259 (18%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWA----- 438
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 439 ---------QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 490 -----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 197 DIXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 545 ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPS 604
Y + EE R L + + P T + + + C +PS
Sbjct: 251 --YPGVKI--------------DEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPS 293
Query: 605 GRPAMDKIAQSISRFLNAS 623
RP ++ + + L A+
Sbjct: 294 QRPTFSELVEHLGNLLQAN 312
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 133 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 133 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH 503
A ++ GL +LHS V++D+K N+LLD D KIA+F + + E G+ A T+
Sbjct: 125 AAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGD-AKTNE 178
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENML 553
GT Y+APE L + +D ++FGVL+ EML G+ EE +
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 47/259 (18%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWA----- 438
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 439 ---------QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 490 -----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 188 DIXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 545 ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPS 604
Y + EE R L + + P T + + + C +PS
Sbjct: 242 --YPGVKI--------------DEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPS 284
Query: 605 GRPAMDKIAQSISRFLNAS 623
RP ++ + + L A+
Sbjct: 285 QRPTFSELVEHLGNLLQAN 303
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 375 AIKKVYGDASDQIK------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428
+KK D+++ +L ++NH +++L G YL+ + G L ++
Sbjct: 59 VLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS 118
Query: 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
K F + + +A ++A L++LHS +++D+K N+LLD + K+ +F L+
Sbjct: 119 -KEVMFTEEDVKFYLA-ELALALDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLS 173
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ + E + GT YMAPE + + D ++FGVLM EML+G
Sbjct: 174 KESIDHEKK---AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 49/263 (18%)
Query: 362 GSVY--RGKIGGDFVAIKKV----------YGDASDQIKLLNKINHSSLIRLLGICFNGG 409
G+VY R + VAIKK+ + D +++ L K+ H + I+ G
Sbjct: 29 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 88
Query: 410 NWYLVYENAVNGSLS--VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDI 467
+LV E + GS S + ++ K + ++ A AL GL YLHS +H+D+
Sbjct: 89 TAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGAL---QGLAYLHSHNM---IHRDV 141
Query: 468 KCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEY---LENGLVSTK 524
K N+LL K+ +F A A + VGT +MAPE ++ G K
Sbjct: 142 KAGNILLSEPGLVKLGDFGSA-------SIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 525 LDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584
+DV++ G+ +E+ K P L+ NM + L + E P++Q +
Sbjct: 195 VDVWSLGITCIELAERK--PPLF---NMNAMSALYHIAQNE----------SPALQSGH- 238
Query: 585 PVTAILVIRLIESCLKKDPSGRP 607
+ ++SCL+K P RP
Sbjct: 239 --WSEYFRNFVDSCLQKIPQDRP 259
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 153 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 47/259 (18%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWA----- 438
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 439 ---------QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 490 -----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 188 DIXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 545 ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPS 604
Y + EE R L + + P T + + + C +PS
Sbjct: 242 --YPGVKI--------------DEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPS 284
Query: 605 GRPAMDKIAQSISRFLNAS 623
RP ++ + + L A+
Sbjct: 285 QRPTFSELVEHLGNLLQAN 303
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 379 VYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWA 438
V G +I+ L H +I+L + ++++V E G L +I K G+ +
Sbjct: 54 VVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC-KHGRVEEME 112
Query: 439 QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF 498
R ++ + + ++Y H VH+D+K NVLLD AKIA+F L+ +GEF
Sbjct: 113 AR-RLFQQILSAVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEF 166
Query: 499 ALTSHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
S G+ Y APE + L + ++D+++ GV++ +L G
Sbjct: 167 LRDS--CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH 503
A ++ GL +LHS V++D+K N+LLD D KIA+F + + E G+ A T+
Sbjct: 124 AAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGD-AKTNX 177
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENML 553
GT Y+APE L + +D ++FGVL+ EML G+ EE +
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 135 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 133 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 135 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 141 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 133 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGN--WYLVYENAVNGSLSVWIND--KGGKFLDWAQRI 441
++ LL ++ H +++R + N Y+V E G L+ I K ++LD +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 442 QIALDVATGLNYLHSFTNPPH--VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
++ + L H ++ H +H+D+K +NV LD K+ +F LAR + FA
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFA 173
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
T VGT YM+PE + + K D+++ G L+ E+
Sbjct: 174 KT--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 47/259 (18%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWA----- 438
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 117 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 176
Query: 439 ---------QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 177 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 233
Query: 490 -----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 234 DIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
Query: 545 ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPS 604
Y + EE R L + + P T + + + C +PS
Sbjct: 288 --YPGVKI--------------DEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPS 330
Query: 605 GRPAMDKIAQSISRFLNAS 623
RP ++ + + L A+
Sbjct: 331 QRPTFSELVEHLGNLLQAN 349
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 138 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 20/178 (11%)
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFA----LARP 490
LD + I +V GL YLH +H+D+K N+LL D +IA+F LA
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATG 169
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGKEAPALYSE 549
+ + T VGT +MAPE +E K D+++FG+ +E+ +G Y
Sbjct: 170 GDITRNKVRKT--FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP 227
Query: 550 ENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRP 607
+L++ + N E G + D M Y ++I CL+KDP RP
Sbjct: 228 MKVLMLTLQNDPPSLETG------VQDKEMLKKYGKSFR----KMISLCLQKDPEKRP 275
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 139 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 130 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 153 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 131 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 131 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 55/290 (18%)
Query: 364 VYRGKIGGDFVAIKKVYGD----ASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENA 418
VYRG VA+K++ + A +++LL + + H ++IR + Y+ E
Sbjct: 41 VYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE-L 99
Query: 419 VNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-- 476
+L ++ K L + I + +GL +LHS VH+D+K N+L+
Sbjct: 100 CAATLQEYVEQKDFAHLGL-EPITLLQQTTSGLAHLHSLNI---VHRDLKPHNILISMPN 155
Query: 477 ---DFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVST---KLDVYAF 530
+A I++F L + F+ S + GT+G++APE L +D+++
Sbjct: 156 AHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSA 215
Query: 531 GVLMLEMLSGKEAP---ALYSEENMLL----VDVLNPVLHKEDGEESLRHLMDPSMQGNY 583
G + ++S P +L + N+LL +D L+P H++
Sbjct: 216 GCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHED------------------ 257
Query: 584 PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWELSKNIS 633
++ LIE + DP RP+ + L W L K +
Sbjct: 258 -----VIARELIEKMIAMDPQKRPSAKHV-------LKHPFFWSLEKQLQ 295
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+L++T KI +F LAR A+ + + V
Sbjct: 153 ILRGLKYIHSANV---LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 47/259 (18%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWA----- 438
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 439 ---------QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 490 -----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 197 DIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 545 ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPS 604
Y + EE R L + + P T + + + C +PS
Sbjct: 251 --YPGVKI--------------DEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPS 293
Query: 605 GRPAMDKIAQSISRFLNAS 623
RP ++ + + L A+
Sbjct: 294 QRPTFSELVEHLGNLLQAN 312
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 20/178 (11%)
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFA----LARP 490
LD + I +V GL YLH +H+D+K N+LL D +IA+F LA
Sbjct: 118 LDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGKEAPALYSE 549
+ + T VGT +MAPE +E K D+++FG+ +E+ +G Y
Sbjct: 175 GDITRNKVRKT--FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP 232
Query: 550 ENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRP 607
+L++ + N E G + D M Y ++I CL+KDP RP
Sbjct: 233 MKVLMLTLQNDPPSLETG------VQDKEMLKKYGKSFR----KMISLCLQKDPEKRP 280
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ + V
Sbjct: 135 ILRGLKYIHSANV---LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR-KIGSFDETCTRFYTA-EIV 142
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANSFV 195
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L S D++A G ++ ++++G
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 47/259 (18%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWA----- 438
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 439 ---------QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 490 -----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 188 DIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 545 ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPS 604
+ +D EE R L + + P T + + + C +PS
Sbjct: 242 Y-----PGVKID-----------EEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPS 284
Query: 605 GRPAMDKIAQSISRFLNAS 623
RP ++ + + L A+
Sbjct: 285 QRPTFSELVEHLGNLLQAN 303
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 47/259 (18%)
Query: 386 QIKLLNKINHS-SLIRLLGICFN-GGNWYLVYENAVNGSLSVWINDKGGKFLDWA----- 438
++K+L I H +++ LLG C GG ++ E G+LS ++ K +F+ +
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 439 ---------QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 490 -----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 188 DIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 545 ALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPS 604
Y + EE R L + + P T + + + C +PS
Sbjct: 242 --YPGVKI--------------DEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPS 284
Query: 605 GRPAMDKIAQSISRFLNAS 623
RP ++ + + L A+
Sbjct: 285 QRPTFSELVEHLGNLLQAN 303
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 41/247 (16%)
Query: 371 GDFVAIKKVYGDASDQIKLL-NKI------NHSSLIRLLGICFNGGNWYLVYENAVNGSL 423
G VA+KK+ + +LL N++ H +++ + G ++V E G+L
Sbjct: 54 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 113
Query: 424 SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIA 483
+ + ++ Q + L V L+ LH+ +H+DIK ++LL D R K++
Sbjct: 114 TDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLS 167
Query: 484 NFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEA 543
+F + E +VGT +MAPE + ++D+++ G++++EM+ G+
Sbjct: 168 DFGFCAQVSK---EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE-- 222
Query: 544 PALYSEENM----LLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
P ++E + ++ D L P L H + PS++G ++ L
Sbjct: 223 PPYFNEPPLKAMKMIRDNLPPRLKN-------LHKVSPSLKG------------FLDRLL 263
Query: 600 KKDPSGR 606
+DP+ R
Sbjct: 264 VRDPAQR 270
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 386 QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG--------GKFLD 436
++K+++ + H +++ LLG C +GG ++ E G L ++ K G+ L+
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + VA G+ +L S +H+D+ NVLL AKI +F LAR +
Sbjct: 151 LRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDS 206
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+ + + +MAPE + + + + + DV+++G+L+ E+ S
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 41/247 (16%)
Query: 371 GDFVAIKKVYGDASDQIKLL-NKI------NHSSLIRLLGICFNGGNWYLVYENAVNGSL 423
G VA+KK+ + +LL N++ H +++ + G ++V E G+L
Sbjct: 99 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158
Query: 424 SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIA 483
+ + ++ Q + L V L+ LH+ +H+DIK ++LL D R K++
Sbjct: 159 TDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLS 212
Query: 484 NFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEA 543
+F + E +VGT +MAPE + ++D+++ G++++EM+ G+
Sbjct: 213 DFGFCAQVSK---EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE-- 267
Query: 544 PALYSEENM----LLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
P ++E + ++ D L P L H + PS++G ++ L
Sbjct: 268 PPYFNEPPLKAMKMIRDNLPPRLKN-------LHKVSPSLKG------------FLDRLL 308
Query: 600 KKDPSGR 606
+DP+ R
Sbjct: 309 VRDPAQR 315
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 41/247 (16%)
Query: 371 GDFVAIKKVYGDASDQIKLL-NKI------NHSSLIRLLGICFNGGNWYLVYENAVNGSL 423
G VA+KK+ + +LL N++ H +++ + G ++V E G+L
Sbjct: 56 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 424 SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIA 483
+ + ++ Q + L V L+ LH+ +H+DIK ++LL D R K++
Sbjct: 116 TDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLS 169
Query: 484 NFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEA 543
+F + E +VGT +MAPE + ++D+++ G++++EM+ G+
Sbjct: 170 DFGFCAQVSK---EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE-- 224
Query: 544 PALYSEENM----LLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
P ++E + ++ D L P L H + PS++G ++ L
Sbjct: 225 PPYFNEPPLKAMKMIRDNLPPRLKN-------LHKVSPSLKG------------FLDRLL 265
Query: 600 KKDPSGR 606
+DP+ R
Sbjct: 266 VRDPAQR 272
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
Y V E G L I + G+F + + A ++A GL +L S +++D+K N
Sbjct: 418 YFVMEYVNGGDLMYHIQ-QVGRFKE-PHAVFYAAEIAIGLFFLQSKGI---IYRDLKLDN 472
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFG 531
V+LD++ KIA+F + + + T GT Y+APE + +D +AFG
Sbjct: 473 VMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFG 529
Query: 532 VLMLEMLSGKEAPALYSEENMLLVDVLN 559
VL+ EML+G +AP +E+ L ++
Sbjct: 530 VLLYEMLAG-QAPFEGEDEDELFQSIME 556
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 375 AIKKVYGDASDQIK------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428
+KK D+++ +L ++NH +++L G YL+ + G L ++
Sbjct: 60 VLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS 119
Query: 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
K F + + +A ++A L++LHS +++D+K N+LLD + K+ +F L+
Sbjct: 120 -KEVMFTEEDVKFYLA-ELALALDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLS 174
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ + E + GT YMAPE + + D ++FGVLM EML+G
Sbjct: 175 KESIDHEKK---AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 375 AIKKVYGDASDQIK------LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428
+KK D+++ +L ++NH +++L G YL+ + G L ++
Sbjct: 59 VLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS 118
Query: 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
K F + + +A ++A L++LHS +++D+K N+LLD + K+ +F L+
Sbjct: 119 -KEVMFTEEDVKFYLA-ELALALDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLS 173
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ + E + GT YMAPE + + D ++FGVLM EML+G
Sbjct: 174 KESIDHEKK---AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 386 QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG--------GKFLD 436
++K+++ + H +++ LLG C +GG ++ E G L ++ K G+ L+
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + VA G+ +L S +H+D+ NVLL AKI +F LAR +
Sbjct: 159 LRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDS 214
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+ + + +MAPE + + + + + DV+++G+L+ E+ S
Sbjct: 215 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 383 ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
+++K+ ++ H S++ L + YLV E NG ++ ++ ++ F + R
Sbjct: 58 VQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-H 116
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAER-QEGEFALT 501
+ TG+ YLHS +H+D+ SN+LL + KIA+F LA + E + L
Sbjct: 117 FMHQIITGMLYLHSHGI---LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL- 172
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPV 561
GT Y++PE + DV++ G + +L G+ P ++ + + LN V
Sbjct: 173 ---CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR--PPFDTDT---VKNTLNKV 224
Query: 562 LHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKI 612
+ L D M P +I LI L+++P+ R ++ +
Sbjct: 225 V-----------LADYEM----PSFLSIEAKDLIHQLLRRNPADRLSLSSV 260
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+LL+T KI +F LAR A+ V
Sbjct: 138 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 507 TKGYMAPEYLENGLVSTK-LDVYAFGVLMLEMLSGK 541
T+ Y APE + N TK +D+++ G ++ EMLS +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 374 VAIKKVY-------GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426
VAIKK+ A +IK++ +++H +++++ I G+ ++ SV+
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 427 INDK-----------GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD 475
I + G L+ R+ + GL Y+HS +H+D+K +N+ ++
Sbjct: 99 IVQEYMETDLANVLEQGPLLEEHARL-FMYQLLRGLKYIHSANV---LHRDLKPANLFIN 154
Query: 476 T-DFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTK-LDVYAFGVL 533
T D KI +F LAR + S + TK Y +P L + TK +D++A G +
Sbjct: 155 TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCI 214
Query: 534 MLEMLSGKEAPALYSE-ENMLLVDVLNPVLHKEDGEESL 571
EML+GK A E E M L+ PV+H+ED +E L
Sbjct: 215 FAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELL 253
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 18/179 (10%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++LL K++H ++++L I + ++Y+V E G L I + K +I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIK 128
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDT---DFRAKIANFALARPAERQEGEFALTS 502
V +G+ Y+H VH+D+K N+LL++ D KI +F L+ ++
Sbjct: 129 QVFSGITYMHKHNI---VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN----TKMK 181
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPV 561
+GT Y+APE L G K DV++ GV++ +LSG P Y + D+L V
Sbjct: 182 DRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEY---DILKRV 234
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 18/179 (10%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++LL K++H ++++L I + ++Y+V E G L I + K +I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIK 128
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDT---DFRAKIANFALARPAERQEGEFALTS 502
V +G+ Y+H VH+D+K N+LL++ D KI +F L+ ++
Sbjct: 129 QVFSGITYMHKHNI---VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN----TKMK 181
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPV 561
+GT Y+APE L G K DV++ GV++ +LSG P Y + D+L V
Sbjct: 182 DRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEY---DILKRV 234
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 389 LLNKINHSSLIRLLGICF-NGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDV 447
++++++H ++L CF + Y A NG L +I K G F + R A ++
Sbjct: 90 VMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EI 146
Query: 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHI 504
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A +
Sbjct: 147 VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXF 199
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
VGT Y++PE L D++A G ++ ++++G
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 362 GSVYRGKIG-GDFVAIKKVYGDASDQ---------IKLLNKINHSSLIRLLGICFNGGNW 411
G VY+ K G VA+K++ DA D+ I LL +++H +++ L+ + +
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL---DVATGLNYLHSFTNPPHVHKDIK 468
LV+E V +K G Q QI + + G+ + H +H+D+K
Sbjct: 95 TLVFEFMEKDLKKVLDENKTG-----LQDSQIKIYLYQLLRGVAHCHQHRI---LHRDLK 146
Query: 469 CSNVLLDTDFRAKIANFALARPAERQEGEFALT----SHIVGTKGYMAPEYLE-NGLVST 523
N+L+++D K+A+F LAR F + +H V T Y AP+ L + ST
Sbjct: 147 PQNLLINSDGALKLADFGLAR-------AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 524 KLDVYAFGVLMLEMLSGK 541
+D+++ G + EM++GK
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
+++ ++ H +++ + G +++ E G+L+ ++ L+ Q +
Sbjct: 91 NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVC 147
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V L YLH+ +H+DIK ++LL D R K+++F + + +
Sbjct: 148 EAVLQALAYLHAQGV---IHRDIKSDSILLTLDGRVKLSDFGFCAQISK---DVPKRKXL 201
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHK 564
VGT +MAPE + L +T++D+++ G++++EM+ G+ P +S+ +PV
Sbjct: 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE--PPYFSD---------SPV--- 247
Query: 565 EDGEESLRHLMD--PSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++++ L D P N V+ +L +E L +DP R
Sbjct: 248 ----QAMKRLRDSPPPKLKNSHKVSPVLR-DFLERMLVRDPQER 286
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 41/247 (16%)
Query: 371 GDFVAIKKVYGDASDQIKLL-NKI------NHSSLIRLLGICFNGGNWYLVYENAVNGSL 423
G VA+KK+ + +LL N++ H +++ + G ++V E G+L
Sbjct: 49 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 108
Query: 424 SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIA 483
+ + ++ Q + L V L+ LH+ +H+DIK ++LL D R K++
Sbjct: 109 TDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLS 162
Query: 484 NFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEA 543
+F + E +VGT +MAPE + ++D+++ G++++EM+ G+
Sbjct: 163 DFGFCAQVSK---EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE-- 217
Query: 544 PALYSEENM----LLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
P ++E + ++ D L P L H + PS++G ++ L
Sbjct: 218 PPYFNEPPLKAMKMIRDNLPPRLKN-------LHKVSPSLKG------------FLDRLL 258
Query: 600 KKDPSGR 606
+DP+ R
Sbjct: 259 VRDPAQR 265
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 362 GSVYRGKIG-GDFVAIKKVYGDASDQ---------IKLLNKINHSSLIRLLGICFNGGNW 411
G VY+ K G VA+K++ DA D+ I LL +++H +++ L+ + +
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL---DVATGLNYLHSFTNPPHVHKDIK 468
LV+E V +K G Q QI + + G+ + H +H+D+K
Sbjct: 95 TLVFEFMEKDLKKVLDENKTG-----LQDSQIKIYLYQLLRGVAHCHQHRI---LHRDLK 146
Query: 469 CSNVLLDTDFRAKIANFALARPAERQEGEFALT----SHIVGTKGYMAPEYLE-NGLVST 523
N+L+++D K+A+F LAR F + +H V T Y AP+ L + ST
Sbjct: 147 PQNLLINSDGALKLADFGLAR-------AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 524 KLDVYAFGVLMLEMLSGK 541
+D+++ G + EM++GK
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 41/247 (16%)
Query: 371 GDFVAIKKVYGDASDQIKLL-NKI------NHSSLIRLLGICFNGGNWYLVYENAVNGSL 423
G VA+KK+ + +LL N++ H +++ + G ++V E G+L
Sbjct: 45 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104
Query: 424 SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIA 483
+ + ++ Q + L V L+ LH+ +H+DIK ++LL D R K++
Sbjct: 105 TDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLS 158
Query: 484 NFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEA 543
+F + E +VGT +MAPE + ++D+++ G++++EM+ G+
Sbjct: 159 DFGFCAQVSK---EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE-- 213
Query: 544 PALYSEENM----LLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCL 599
P ++E + ++ D L P L H + PS++G ++ L
Sbjct: 214 PPYFNEPPLKAMKMIRDNLPPRLKN-------LHKVSPSLKG------------FLDRLL 254
Query: 600 KKDPSGR 606
+DP+ R
Sbjct: 255 VRDPAQR 261
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 375 AIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434
A+K ++I +L KI H +++ L I + + YLV + G L I +KG F
Sbjct: 59 ALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKG--F 116
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPA 491
+ V + YLH VH+D+K N+L D + + I++F L++
Sbjct: 117 YTEKDASTLIRQVLDAVYYLHRMGI---VHRDLKPENLLYYSQDEESKIMISDFGLSK-- 171
Query: 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN 551
EG+ + S GT GY+APE L S +D ++ GV+ +L G P Y E +
Sbjct: 172 --MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFYDEND 227
Query: 552 MLLVD 556
L +
Sbjct: 228 SKLFE 232
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 14/185 (7%)
Query: 360 IKGSVY-RGKIGGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENA 418
IK S + +G+ D I+K + + ++I LL ++H ++I+L + + +YLV E
Sbjct: 69 IKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFY 128
Query: 419 VNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD- 477
G L I ++ KF D I + +G+ YLH VH+DIK N+LL+
Sbjct: 129 EGGELFEQIINR-HKF-DECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKN 183
Query: 478 --FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLML 535
KI +F L+ + ++ L + GT Y+APE L+ + K DV++ GV+M
Sbjct: 184 SLLNIKIVDFGLSSFFSK---DYKLRDRL-GTAYYIAPEVLKKK-YNEKCDVWSCGVIMY 238
Query: 536 EMLSG 540
+L G
Sbjct: 239 ILLCG 243
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI---- 441
++++L++ N ++ G ++ G + E+ GSL + L A+RI
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD--------QVLKEAKRIPEEI 115
Query: 442 --QIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF- 498
++++ V GL YL +H+D+K SN+L+++ K+ +F ++ G+
Sbjct: 116 LGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS-------GQLI 166
Query: 499 -ALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
++ + VGT+ YMAPE L+ S + D+++ G+ ++E+ G+ P + L
Sbjct: 167 DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR-YPIPPPDAKELEAIF 225
Query: 558 LNPVLHKEDGE 568
PV+ E+GE
Sbjct: 226 GRPVVDGEEGE 236
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 28/237 (11%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++ + H L++L + Y++ E GSL ++ G + I + +A
Sbjct: 236 VMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 294
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H+D++ +N+L+ KIA+F LAR E + E+
Sbjct: 295 EGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIE--DNEYTAREGAKFPI 349
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GK-EAPALYSEENMLLVDVLNPVLHKED 566
+ APE + G + K DV++FG+L++E+++ G+ P + + E + ++ + E+
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPEN 409
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
E L ++M C K P RP + I + F A+
Sbjct: 410 CPEELYNIM--------------------MRCWKNRPEERPTFEYIQSVLDDFYTAT 446
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++LL K++H ++++L I + ++Y+V E G L I + K +I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIK 128
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDT---DFRAKIANFALARPAERQEGEFALTS 502
V +G+ Y+H VH+D+K N+LL++ D KI +F L+ ++
Sbjct: 129 QVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN----TKMK 181
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALY 547
+GT Y+APE L G K DV++ GV++ +LSG P Y
Sbjct: 182 DRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG--TPPFY 223
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 120
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 121 SALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 173
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++ + H L++L + Y++ E GSL ++ G + I + +A
Sbjct: 63 VMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 121
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H+D++ +N+L+ KIA+F LAR E + E+
Sbjct: 122 EGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIE--DNEYTAREGAKFPI 176
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAP 544
+ APE + G + K DV++FG+L++E+++ P
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
Y V E G L I + G+F + + A ++A GL +L S +++D+K N
Sbjct: 97 YFVMEYVNGGDLMYHIQ-QVGRFKE-PHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDN 151
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFG 531
V+LD++ KIA+F + + + T GT Y+APE + +D +AFG
Sbjct: 152 VMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFG 208
Query: 532 VLMLEMLSGKEAPALYSEENMLLVDVLN 559
VL+ EML+G +AP +E+ L ++
Sbjct: 209 VLLYEMLAG-QAPFEGEDEDELFQSIME 235
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 350 ATDDFNPSCWIK----GSVYRGK--IGGDFVAIKKVYGDASDQ------------IKLLN 391
AT + P I G+VY+ + G FVA+K V ++ ++ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 392 KINHSSLIRLLGICFNGG-----NWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALD 446
H +++RL+ +C LV+E+ V+ L +++ L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
GL++LH+ VH+D+K N+L+ + K+A+F LAR Q F +V
Sbjct: 121 FLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP----VVV 173
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
T Y APE L +T +D+++ G + EM K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 32/196 (16%)
Query: 363 SVYRGKIGGDFVAIKKVY---------GDASDQIKLLNKINHSSLIRLLGI------CFN 407
S G+ G VAIKK+Y A +++LL + H ++I LL + +
Sbjct: 43 SAVDGRTGAK-VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101
Query: 408 GGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ-IALDVATGLNYLHSFTNPPHVHKD 466
++YLV + ++K G+ RIQ + + GL Y+H+ +H+D
Sbjct: 102 FTDFYLVMPFMGTDLGKLMKHEKLGE-----DRIQFLVYQMLKGLRYIHAAGI---IHRD 153
Query: 467 IKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTK-L 525
+K N+ ++ D KI +F LAR A+ + V T+ Y APE + N + T+ +
Sbjct: 154 LKPGNLAVNEDCELKILDFGLARQADSE------MXGXVVTRWYRAPEVILNWMRYTQTV 207
Query: 526 DVYAFGVLMLEMLSGK 541
D+++ G +M EM++GK
Sbjct: 208 DIWSVGCIMAEMITGK 223
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 27/165 (16%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSL-SVWINDKGGKFLDWAQRIQIA 444
+++LL +++H ++++L + G +YLV E G L I+ K +D A+ I+
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR-- 133
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V +G+ Y+H VH+D+K N+LL++ ++K AN + +F L++H
Sbjct: 134 -QVLSGITYMH---KNKIVHRDLKPENLLLES--KSKDANIRII--------DFGLSTHF 179
Query: 505 ---------VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+GT Y+APE L +G K DV++ GV++ +LSG
Sbjct: 180 EASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 376 IKKVYGDASDQIKLLNKINHSSLIRLLGICF--NGGNWYLVYENAVNGSLSVWINDKGGK 433
I++VY +I +L K++H ++++L+ + N + Y+V+E G + + K
Sbjct: 80 IEQVY----QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLK 132
Query: 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAER 493
L Q D+ G+ YLH +H+DIK SN+L+ D KIA+F ++
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKI---IHRDIKPSNLLVGEDGHIKIADFGVSN---E 186
Query: 494 QEGEFALTSHIVGTKGYMAPEYLE--NGLVSTK-LDVYAFGVLM 534
+G AL S+ VGT +MAPE L + S K LDV+A GV +
Sbjct: 187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 26/256 (10%)
Query: 371 GDFVAIKKVYGDASDQ--------IKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVN 420
G+ VA+K + Q I++L + H +++ G C + G + LV E
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 421 GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA 480
GSL ++ + AQ + A + G+ YLH+ ++H+ + NVLLD D
Sbjct: 98 GSLRDYLPRH---CVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLV 151
Query: 481 KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
KI +F LA+ + + + APE L+ DV++FGV + E+L+
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT- 210
Query: 541 KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGN---YPPVTAILVIRLIES 597
Y + N ++ G+ ++ L + +G P + L+++
Sbjct: 211 ------YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKN 264
Query: 598 CLKKDPSGRPAMDKIA 613
C + + S RP +
Sbjct: 265 CWETEASFRPTFQNLV 280
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 27/165 (16%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSL-SVWINDKGGKFLDWAQRIQIA 444
+++LL +++H ++++L + G +YLV E G L I+ K +D A+ I+
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR-- 139
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V +G+ Y+H VH+D+K N+LL++ ++K AN + +F L++H
Sbjct: 140 -QVLSGITYMH---KNKIVHRDLKPENLLLES--KSKDANIRII--------DFGLSTHF 185
Query: 505 ---------VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+GT Y+APE L +G K DV++ GV++ +LSG
Sbjct: 186 EASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 229
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 60 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 117
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 118 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 170
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGN------------WYLVYENAVNGSLSVWINDKGGK 433
++K L K+ H ++R Y+ + +L W+N G
Sbjct: 53 EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN--GRC 110
Query: 434 FLDWAQR---IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490
++ +R + I L +A + +LHS +H+D+K SN+ D K+ +F L
Sbjct: 111 TIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA 167
Query: 491 AERQEGE---------FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEML 538
++ E E +A + VGTK YM+PE + S K+D+++ G+++ E+L
Sbjct: 168 MDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 118
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 119 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 171
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 27/165 (16%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSL-SVWINDKGGKFLDWAQRIQIA 444
+++LL +++H ++++L + G +YLV E G L I+ K +D A+ I+
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR-- 156
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V +G+ Y+H VH+D+K N+LL++ ++K AN + +F L++H
Sbjct: 157 -QVLSGITYMH---KNKIVHRDLKPENLLLES--KSKDANIRII--------DFGLSTHF 202
Query: 505 ---------VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+GT Y+APE L +G K DV++ GV++ +LSG
Sbjct: 203 EASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 246
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 394 NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNY 453
NH L+ L CF + VNG ++ + K + R A +++ LNY
Sbjct: 64 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNY 121
Query: 454 LHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAP 513
LH +++D+K NVLLD++ K+ ++ + + R G+ TS GT Y+AP
Sbjct: 122 LHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GD--TTSXFCGTPNYIAP 175
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGK 541
E L +D +A GVLM EM++G+
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 394 NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNY 453
NH L+ L CF + VNG ++ + K + R A +++ LNY
Sbjct: 68 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNY 125
Query: 454 LHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAP 513
LH +++D+K NVLLD++ K+ ++ + + R G+ TS GT Y+AP
Sbjct: 126 LHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGD--TTSXFCGTPNYIAP 179
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGK 541
E L +D +A GVLM EM++G+
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 140
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 141 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 193
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 119
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 120 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 172
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 140
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 141 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 193
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 27/165 (16%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSL-SVWINDKGGKFLDWAQRIQIA 444
+++LL +++H ++++L + G +YLV E G L I+ K +D A+ I+
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR-- 157
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V +G+ Y+H VH+D+K N+LL++ ++K AN + +F L++H
Sbjct: 158 -QVLSGITYMH---KNKIVHRDLKPENLLLES--KSKDANIRII--------DFGLSTHF 203
Query: 505 ---------VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+GT Y+APE L +G K DV++ GV++ +LSG
Sbjct: 204 EASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 247
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 394 NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNY 453
NH L+ L CF + VNG ++ + K + R A +++ LNY
Sbjct: 79 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNY 136
Query: 454 LHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAP 513
LH +++D+K NVLLD++ K+ ++ + + R G+ TS GT Y+AP
Sbjct: 137 LHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GD--TTSXFCGTPNYIAP 190
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGK 541
E L +D +A GVLM EM++G+
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 140
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 141 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 193
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 143
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 144 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 196
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 143
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 144 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANSFV 196
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGN--WYLVYENAVNGSLSVWIND--KGGKFLDWAQRI 441
++ LL ++ H +++R + N Y+V E G L+ I K ++LD +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 442 QIALDVATGLNYLHSFTNPPH--VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
++ + L H ++ H +H+D+K +NV LD K+ +F LAR + +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH---DTS 171
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
VGT YM+PE + + K D+++ G L+ E+
Sbjct: 172 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 26/256 (10%)
Query: 371 GDFVAIKKVYGDASDQ--------IKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVN 420
G+ VA+K + Q I++L + H +++ G C + G + LV E
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 421 GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA 480
GSL ++ + AQ + A + G+ YLH+ ++H+ + NVLLD D
Sbjct: 97 GSLRDYLPRH---CVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLV 150
Query: 481 KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
KI +F LA+ + + + APE L+ DV++FGV + E+L+
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT- 209
Query: 541 KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGN---YPPVTAILVIRLIES 597
Y + N ++ G+ ++ L + +G P + L+++
Sbjct: 210 ------YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKN 263
Query: 598 CLKKDPSGRPAMDKIA 613
C + + S RP +
Sbjct: 264 CWETEASFRPTFQNLV 279
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 394 NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNY 453
NH L+ L CF + VNG ++ + K + R A +++ LNY
Sbjct: 111 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNY 168
Query: 454 LHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAP 513
LH +++D+K NVLLD++ K+ ++ + + R G+ TS GT Y+AP
Sbjct: 169 LHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GD--TTSTFCGTPNYIAP 222
Query: 514 EYLENGLVSTKLDVYAFGVLMLEMLSGK 541
E L +D +A GVLM EM++G+
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 142
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 195
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 145
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 146 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 198
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 44/212 (20%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASDQIKLLNKIN--------HSSLIRLL----GICFNGG 409
G+VY+G + VA+K V+ A+ Q +N+ N H ++ R + + +G
Sbjct: 27 GAVYKGSLDERPVAVK-VFSFANRQ-NFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84
Query: 410 NWYL-VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHS------FTNPPH 462
YL V E NGSL +++ DW ++A V GL YLH+ P
Sbjct: 85 MEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALA---------RPAERQEGEFALTSHIVGTKGYMAP 513
H+D+ NVL+ D I++F L+ RP E E A++ VGT YMAP
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGE--EDNAAISE--VGTIRYMAP 197
Query: 514 EYLENGL-------VSTKLDVYAFGVLMLEML 538
E LE + ++D+YA G++ E+
Sbjct: 198 EVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 142
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 195
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 142
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 195
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 142
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 195
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 142
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 195
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 67 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 124
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 125 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 177
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 139
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 140 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANXFV 192
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 139
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 140 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANSFV 192
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++++++H ++L + Y A NG L +I K G F + R A ++
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIV 140
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---PAERQEGEFALTSHIV 505
+ L YLH +H+D+K N+LL+ D +I +F A+ P +Q A + V
Sbjct: 141 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----ARANAFV 193
Query: 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L D++A G ++ ++++G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
Query: 322 DEESRDFLESISDIAQSLKVYT-FEEL-QAATDDFNPSCWIKGSVYRGK--IGGDFVAIK 377
DEE + L I + K YT FE++ Q A+ G+VY G VAI+
Sbjct: 3 DEEILEKLRIIVSVGDPKKKYTRFEKIGQGAS----------GTVYTAMDVATGQEVAIR 52
Query: 378 KVYGDAS-------DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430
++ ++I ++ + + +++ L G ++V E GSL+ + +
Sbjct: 53 QMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET 112
Query: 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490
+D Q + + L +LHS +H++IK N+LL D K+ +F
Sbjct: 113 ---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQ 166
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE 550
++ + S +VGT +MAPE + K+D+++ G++ +EM+ G E P Y E
Sbjct: 167 ITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG-EPP--YLNE 220
Query: 551 NML 553
N L
Sbjct: 221 NPL 223
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 30/163 (18%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG--EFALTSH 503
++ + L YLHS V++DIK N++LD D KI +F L + EG + A
Sbjct: 118 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKX 169
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLFELI----- 222
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P + L+ LKKDP R
Sbjct: 223 ----------LME---EIRFPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 30/163 (18%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG--EFALTSH 503
++ + L YLHS V++DIK N++LD D KI +F L + EG + A
Sbjct: 113 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKX 164
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLFELI----- 217
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P + L+ LKKDP R
Sbjct: 218 ----------LME---EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++L++ N ++ G ++ G + E+ GSL + G ++ IA
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA- 174
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF--ALTSH 503
V GL YL +H+D+K SN+L+++ K+ +F ++ G+ ++ +
Sbjct: 175 -VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-------GQLIDSMANS 224
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 30/163 (18%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG--EFALTSH 503
++ + L YLHS V++DIK N++LD D KI +F L + EG + A
Sbjct: 113 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKX 164
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLFELI----- 217
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P + L+ LKKDP R
Sbjct: 218 ----------LME---EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 30/163 (18%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG--EFALTSH 503
++ + L YLHS V++DIK N++LD D KI +F L + EG + A
Sbjct: 113 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKX 164
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLFELI----- 217
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P + L+ LKKDP R
Sbjct: 218 ----------LME---EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 124/278 (44%), Gaps = 53/278 (19%)
Query: 362 GSVYRGKIGGDFVAIK---------KVYGDASDQIKLLNKINHSSLIRLLGICFN--GGN 410
G +++G+ G+ + +K + D +++ L +H +++ +LG C + +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTN--PPHVHKDIK 468
L+ GSL +++ +D +Q ++ ALD+A G+ +LH+ P H +
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA---LN 140
Query: 469 CSNVLLDTDFRAKIA----NFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTK 524
+V++D D A+I+ F+ P + ++APE L+ T
Sbjct: 141 SRSVMIDEDMTARISMADVKFSFQSPGR------------MYAPAWVAPEALQKKPEDTN 188
Query: 525 ---LDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQG 581
D+++F VL+ E+++ +E P D+ N + + E LR P++
Sbjct: 189 RRSADMWSFAVLLWELVT-REVP---------FADLSNMEIGMKVALEGLR----PTI-- 232
Query: 582 NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619
PP + V +L++ C+ +DP+ RP D I + +
Sbjct: 233 --PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 30/163 (18%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG--EFALTSH 503
++ + L YLHS V++DIK N++LD D KI +F L + EG + A
Sbjct: 116 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKT 167
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 168 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLFELI----- 220
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P + L+ LKKDP R
Sbjct: 221 ----------LME---EIRFPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 30/163 (18%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG--EFALTSH 503
++ + L YLHS V++DIK N++LD D KI +F L + EG + A
Sbjct: 113 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKT 164
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLFELI----- 217
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P + L+ LKKDP R
Sbjct: 218 ----------LME---EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 30/163 (18%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG--EFALTSH 503
++ + L YLHS V++DIK N++LD D KI +F L + EG + A
Sbjct: 113 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKT 164
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
GT Y+APE LE+ +D + GV+M EM+ G+ Y++++ L +++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLFELI----- 217
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
LM+ + +P + L+ LKKDP R
Sbjct: 218 ----------LME---EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 45/251 (17%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++L++ N ++ G ++ G + E+ GSL + G ++ IA
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA- 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF--ALTSH 503
V GL YL +H+D+K SN+L+++ K+ +F ++ G+ + +
Sbjct: 116 -VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVS-------GQLIDEMANE 165
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
VGT+ YM+PE L+ S + D+++ G+ ++EM G+ Y M + ++L+ ++
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR-----YPRPPMAIFELLDYIV- 219
Query: 564 KEDGEESLRHLMDPSMQGNYPP------VTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
N PP V ++ + CL K+P+ R + ++ +
Sbjct: 220 ------------------NEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLM--VH 259
Query: 618 RFLNASLAWEL 628
F+ S A E+
Sbjct: 260 AFIKRSDAEEV 270
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 370 GGDFVA--IKKVYGDASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426
GG F A ++++ ++ +L K++ H ++I+L ++LV++ G L +
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 114
Query: 427 INDKGGKFLDWAQRIQIAL-DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
+ +K ++I AL +V L+ L+ VH+D+K N+LLD D K+ +F
Sbjct: 115 LTEKVTLSEKETRKIMRALLEVICALHKLNI------VHRDLKPENILLDDDMNIKLTDF 168
Query: 486 ALA---RPAERQEGEFALTSHIVGTKGYMAPEYLENGL------VSTKLDVYAFGVLMLE 536
+ P E+ + GT Y+APE +E + ++D+++ GV+M
Sbjct: 169 GFSCQLDPGEK-------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 537 MLSGKEAPALYSEENMLLVDVL 558
+L+G +P + + ML++ ++
Sbjct: 222 LLAG--SPPFWHRKQMLMLRMI 241
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 350 ATDDFNPSCWIK----GSVYRGK--IGGDFVAIKKVYGDASDQ------------IKLLN 391
AT + P I G+VY+ + G FVA+K V ++ ++ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 392 KINHSSLIRLLGICFNGG-----NWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALD 446
H +++RL+ +C LV+E+ V+ L +++ L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
GL++LH+ VH+D+K N+L+ + K+A+F LAR Q AL +V
Sbjct: 121 FLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAP-VVV 173
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
T Y APE L +T +D+++ G + EM K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 370 GGDFVA--IKKVYGDASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426
GG F A ++++ ++ +L K++ H ++I+L ++LV++ G L +
Sbjct: 42 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 101
Query: 427 INDKGGKFLDWAQRIQIAL-DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
+ +K ++I AL +V L+ L+ VH+D+K N+LLD D K+ +F
Sbjct: 102 LTEKVTLSEKETRKIMRALLEVICALHKLNI------VHRDLKPENILLDDDMNIKLTDF 155
Query: 486 ALA---RPAERQEGEFALTSHIVGTKGYMAPEYLENGL------VSTKLDVYAFGVLMLE 536
+ P E+ + GT Y+APE +E + ++D+++ GV+M
Sbjct: 156 GFSCQLDPGEK-------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 208
Query: 537 MLSGKEAPALYSEENMLLVDVL 558
+L+G +P + + ML++ ++
Sbjct: 209 LLAG--SPPFWHRKQMLMLRMI 228
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 314 EKASNKKLDEESRDFLESISDIAQSLKVYTFEELQAATDDFNPSCWIK----GSVYR--G 367
+K +LDE+ R LE+ + Q KV ++ DDF + G V++
Sbjct: 2 KKLEELELDEQQRKRLEAF--LTQKQKVGELKD-----DDFEKISELGAGNGGVVFKVSH 54
Query: 368 KIGGDFVAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICFNGGNWYLVYENAV 419
K G +A K ++ + I+ +L++ N ++ G ++ G + E+
Sbjct: 55 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 114
Query: 420 NGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR 479
GSL + G ++ IA V GL YL +H+D+K SN+L+++
Sbjct: 115 GGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHKI--MHRDVKPSNILVNSRGE 170
Query: 480 AKIANFALARPAERQEGEF--ALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
K+ +F ++ G+ ++ + VGT+ YM+PE L+ S + D+++ G+ ++EM
Sbjct: 171 IKLCDFGVS-------GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223
Query: 538 LSGK 541
G+
Sbjct: 224 AVGR 227
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 125/282 (44%), Gaps = 27/282 (9%)
Query: 362 GSVYRGKIGGDFVAIKKVYG--DAS----DQIKLLNKINHSSLIRLLGICFNG-GNW--- 411
G V+ GK G+ VA+K + +AS +I + H +++ + G G+W
Sbjct: 51 GEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHS--FT---NPPHVHKD 466
YL+ + NGSL ++ LD +++A +GL +LH+ F+ P H+D
Sbjct: 111 YLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRD 167
Query: 467 IKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI-VGTKGYMAPEYLENGLVSTKL 525
+K N+L+ + IA+ LA E + + VGTK YM PE L+ L
Sbjct: 168 LKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHF 227
Query: 526 ------DVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESL-RHLMDPS 578
D+Y+FG+++ E+ + + E + D++ ED E + + PS
Sbjct: 228 QSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPS 287
Query: 579 MQGNYPPVTAILVI-RLIESCLKKDPSGRPAMDKIAQSISRF 619
+ + + +L+ C +P+ R ++ +++++
Sbjct: 288 FPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G +VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVY 93
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 150
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDV 206
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 207 WSAGCVLAELLLGQ 220
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 350 ATDDFNPSCWIK----GSVYRGK--IGGDFVAIKKVYGDASDQ------------IKLLN 391
AT + P I G+VY+ + G FVA+K V ++ ++ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 392 KINHSSLIRLLGICFNGG-----NWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALD 446
H +++RL+ +C LV+E+ V+ L +++ L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
GL++LH+ VH+D+K N+L+ + K+A+F LAR Q AL +V
Sbjct: 121 FLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDP-VVV 173
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
T Y APE L +T +D+++ G + EM K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 32/233 (13%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI--NDKGGKFLDWAQRIQI 443
+I++L ++H ++I++ + + N Y+V E G L I GK L ++
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 444 ALDVATGLNYLHSFTNPPH-VHKDIKCSNVLL-DTDFRA--KIANFALARPAERQEGEFA 499
+ L Y HS H VHKD+K N+L DT + KI +F LA + E
Sbjct: 130 MKQMMNALAYFHS----QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--- 182
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
+++ GT YMAPE + V+ K D+++ GV+M +L+G L +V
Sbjct: 183 -STNAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTG-----CLPFTGTSLEEVQQ 235
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKI 612
+KE P+ P+T + L++ L KDP RP+ ++
Sbjct: 236 KATYKE-----------PNYAVECRPLTP-QAVDLLKQMLTKDPERRPSAAQV 276
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 370 GGDFVA--IKKVYGDASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426
GG F A ++++ ++ +L K++ H ++I+L ++LV++ G L +
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 114
Query: 427 INDKGGKFLDWAQRIQIAL-DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
+ +K ++I AL +V L+ L+ VH+D+K N+LLD D K+ +F
Sbjct: 115 LTEKVTLSEKETRKIMRALLEVICALHKLNI------VHRDLKPENILLDDDMNIKLTDF 168
Query: 486 ALA---RPAERQEGEFALTSHIVGTKGYMAPEYLENGL------VSTKLDVYAFGVLMLE 536
+ P E+ + GT Y+APE +E + ++D+++ GV+M
Sbjct: 169 GFSCQLDPGEKLRS-------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 537 MLSGKEAPALYSEENMLLVDVL 558
+L+G +P + + ML++ ++
Sbjct: 222 LLAG--SPPFWHRKQMLMLRMI 241
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 44/240 (18%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
++ + H L++L + Y++ E GSL ++ G + I + +A
Sbjct: 230 VMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 288
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
G+ ++ ++H+D++ +N+L+ KIA+F LAR VG K
Sbjct: 289 EGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLAR---------------VGAK 330
Query: 509 ---GYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GK-EAPALYSEENMLLVDVLNPVLH 563
+ APE + G + K DV++FG+L++E+++ G+ P + + E + ++ +
Sbjct: 331 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR 390
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623
E+ E L ++M C K P RP + I + F A+
Sbjct: 391 PENCPEELYNIM--------------------MRCWKNRPEERPTFEYIQSVLDDFYTAT 430
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++L++ N ++ G ++ G + E+ GSL + G ++ IA
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA- 112
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF--ALTSH 503
V GL YL +H+D+K SN+L+++ K+ +F ++ G+ ++ +
Sbjct: 113 -VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-------GQLIDSMANS 162
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++L++ N ++ G ++ G + E+ GSL + G ++ IA
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA- 112
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF--ALTSH 503
V GL YL +H+D+K SN+L+++ K+ +F ++ G+ ++ +
Sbjct: 113 -VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-------GQLIDSMANS 162
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 350 ATDDFNPSCWIK----GSVYRGK--IGGDFVAIKKVYG------------DASDQIKLLN 391
AT + P I G+VY+ + G FVA+K V ++ LL
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 392 KIN---HSSLIRLLGICFNGG-----NWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQI 443
++ H +++RL+ +C LV+E+ V+ L +++ L +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH 503
GL++LH+ VH+D+K N+L+ + K+A+F LAR Q ALT
Sbjct: 126 MRQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTP- 178
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
+V T Y APE L +T +D+++ G + EM K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++L++ N ++ G ++ G + E+ GSL + G ++ IA
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA- 112
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF--ALTSH 503
V GL YL +H+D+K SN+L+++ K+ +F ++ G+ ++ +
Sbjct: 113 -VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-------GQLIDSMANS 162
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
+L ++ H ++ L+ GG YL+ E G L + + ++ G F++ +A +++
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTACFYLA-EIS 131
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
L +LH +++D+K N++L+ K+ +F L + + + +T GT
Sbjct: 132 MALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH---DGTVTHXFCGTI 185
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD 556
YMAPE L + +D ++ G LM +ML+G AP E +D
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTG--APPFTGENRKKTID 231
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 435 LDWAQRIQIALDVATGLNYLH-----SFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
LD ++I L +A+GL +LH + P H+D+K N+L+ + + IA+ LA
Sbjct: 131 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 190
Query: 490 PAERQEGEFALTSH-IVGTKGYMAPEYLENGLVS------TKLDVYAFGVLMLEMLSGKE 542
+ + + ++ VGTK YMAPE L+ + ++D++AFG+++ E+
Sbjct: 191 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV----- 245
Query: 543 APALYSEENMLLVDVLNP---VLHKEDGEESLRHLM-----DPSMQGNY---PPVTAILV 591
A N ++ D P V+ + E +R ++ P++ + P +T++
Sbjct: 246 --ARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSL-- 301
Query: 592 IRLIESCLKKDPSGRPAMDKIAQSISRF 619
+L++ C ++PS R +I +++++
Sbjct: 302 AKLMKECWYQNPSARLTALRIKKTLTKI 329
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
+L ++ H ++ L+ GG YL+ E G L + + ++ G F++ +A +++
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTACFYLA-EIS 131
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
L +LH +++D+K N++L+ K+ +F L + + + +T GT
Sbjct: 132 MALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH---DGTVTHTFCGTI 185
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD 556
YMAPE L + +D ++ G LM +ML+G AP E +D
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTG--APPFTGENRKKTID 231
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 114/251 (45%), Gaps = 41/251 (16%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++L++ N ++ G ++ G + E+ GSL + G ++ IA
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA- 131
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF--ALTSH 503
V GL YL +H+D+K SN+L+++ K+ +F ++ G+ ++ +
Sbjct: 132 -VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-------GQLIDSMANS 181
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
VGT+ YM+PE L+ S + D+++ G+ ++EM G+ P +M + ++L+ ++
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR-YPIGSGSGSMAIFELLDYIV- 239
Query: 564 KEDGEESLRHLMDPSMQGNYPP------VTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617
N PP V ++ + CL K+P+ R + ++ +
Sbjct: 240 ------------------NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM--VH 279
Query: 618 RFLNASLAWEL 628
F+ S A E+
Sbjct: 280 AFIKRSDAEEV 290
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++L++ N ++ G ++ G + E+ GSL + G ++ IA
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA- 112
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF--ALTSH 503
V GL YL +H+D+K SN+L+++ K+ +F ++ G+ ++ +
Sbjct: 113 -VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVS-------GQLIDSMANS 162
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++L++ N ++ G ++ G + E+ GSL + G ++ IA
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA- 112
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF--ALTSH 503
V GL YL +H+D+K SN+L+++ K+ +F ++ G+ ++ +
Sbjct: 113 -VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVS-------GQLIDSMANS 162
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 27/165 (16%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSL-SVWINDKGGKFLDWAQRIQIA 444
+++LL +++H ++ +L + G +YLV E G L I+ K +D A+ I+
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
L +G+ Y H VH+D+K N+LL++ ++K AN + +F L++H
Sbjct: 136 L---SGITYXH---KNKIVHRDLKPENLLLES--KSKDANIRII--------DFGLSTHF 179
Query: 505 ---------VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+GT Y+APE L +G K DV++ GV++ +LSG
Sbjct: 180 EASKKXKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
I++ D LN+ H +H+D+K +N+L+ K+ +F +AR
Sbjct: 119 IEVIADACQALNFSHQNGI---IHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
T+ ++GT Y++PE V + DVY+ G ++ E+L+G+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 362 GSVYRG--KIGGDFVAIKKVYGDASD--------QIKLLNKINHSSLIRLLGICFNGGNW 411
+VY+G K G +VA+K+V D+ + +I L+ ++ H +++RL +
Sbjct: 19 ATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKL 78
Query: 412 YLVYENAVNGSLSVWINDKG------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHK 465
LV+E ++ L +++ + G L+ + Q L GL + H +H+
Sbjct: 79 TLVFE-FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQGLAFCHENKI---LHR 132
Query: 466 DIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLV-STK 524
D+K N+L++ + K+ +F LAR F+ S +V T Y AP+ L ST
Sbjct: 133 DLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFS--SEVV-TLWYRAPDVLMGSRTYSTS 189
Query: 525 LDVYAFGVLMLEMLSGKEA-PALYSEENMLLV 555
+D+++ G ++ EM++GK P EE + L+
Sbjct: 190 IDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 32/191 (16%)
Query: 368 KIGGDFVAIKKV---------YGDASDQIKLLNKINHSSLIRLLGI------CFNGGNWY 412
K G+ VAIKK+ A ++ LL + H ++I LL + N ++Y
Sbjct: 46 KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQ-IALDVATGLNYLHSFTNPPHVHKDIKCSN 471
LV + G KF + ++IQ + + GL Y+HS VH+D+K N
Sbjct: 106 LVMPFMQTDLQKI----MGLKFSE--EKIQYLVYQMLKGLKYIHSAGV---VHRDLKPGN 156
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDVYAF 530
+ ++ D KI +F LAR A+ + +T ++V T+ Y APE + + + + +D+++
Sbjct: 157 LAVNEDCELKILDFGLARHADAE-----MTGYVV-TRWYRAPEVILSWMHYNQTVDIWSV 210
Query: 531 GVLMLEMLSGK 541
G +M EML+GK
Sbjct: 211 GCIMAEMLTGK 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 35/187 (18%)
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR-----PAERQE 495
I + VA G+ +L S +H+D+ N+LL + KI +F LAR P ++
Sbjct: 202 ISYSFQVARGMEFLSSRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 496 GEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS--GKEAPALYSEENML 553
G+ L +MAPE + + + STK DV+++GVL+ E+ S G P + +E+
Sbjct: 259 GDTRLPLK------WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFC 312
Query: 554 LVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIA 613
LR M+ P + + +++ C +DP RP ++
Sbjct: 313 ---------------SRLRE----GMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELV 353
Query: 614 QSISRFL 620
+ + L
Sbjct: 354 EKLGDLL 360
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 435 LDWAQRIQIALDVATGLNYLH-----SFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
LD ++I L +A+GL +LH + P H+D+K N+L+ + + IA+ LA
Sbjct: 102 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161
Query: 490 PAERQEGEFALTSH-IVGTKGYMAPEYLENGLVS------TKLDVYAFGVLMLEMLSGKE 542
+ + + ++ VGTK YMAPE L+ + ++D++AFG+++ E+
Sbjct: 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMV 221
Query: 543 APALYSEENMLLVDVLNPVLHKEDGEESLRHLM-----DPSMQGNY---PPVTAILVIRL 594
+ + + DV+ + E +R ++ P++ + P +T++ +L
Sbjct: 222 SNGIVEDYKPPFYDVVP----NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSL--AKL 275
Query: 595 IESCLKKDPSGRPAMDKIAQSISRF 619
++ C ++PS R +I +++++
Sbjct: 276 MKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 435 LDWAQRIQIALDVATGLNYLH-----SFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
LD ++I L +A+GL +LH + P H+D+K N+L+ + + IA+ LA
Sbjct: 102 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161
Query: 490 PAERQEGEFALTSH-IVGTKGYMAPEYLENGLVS------TKLDVYAFGVLMLEMLSGKE 542
+ + + ++ VGTK YMAPE L+ + ++D++AFG+++ E+
Sbjct: 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMV 221
Query: 543 APALYSEENMLLVDVLNPVLHKEDGEESLRHLM-----DPSMQGNY---PPVTAILVIRL 594
+ + + DV+ + E +R ++ P++ + P +T++ +L
Sbjct: 222 SNGIVEDYKPPFYDVVP----NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSL--AKL 275
Query: 595 IESCLKKDPSGRPAMDKIAQSISRF 619
++ C ++PS R +I +++++
Sbjct: 276 MKECWYQNPSARLTALRIKKTLTKI 300
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 26/166 (15%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ G YLH +H+D+K N+ L+ D KI +F LA E +GE T + G
Sbjct: 130 IVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKT--LCG 183
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED 566
T Y+APE L S ++DV++ G +M +L GK P E L + L +
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPF---ETSCLKET---YLRIKK 235
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKI 612
E S+ ++P + LI+ L+ DP+ RP ++++
Sbjct: 236 NEYSIPKHINP------------VAASLIQKMLQTDPTARPTINEL 269
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 26/166 (15%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ G YLH +H+D+K N+ L+ D KI +F LA E +GE T + G
Sbjct: 126 IVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKT--LCG 179
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED 566
T Y+APE L S ++DV++ G +M +L GK P E L + L +
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPF---ETSCLKET---YLRIKK 231
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKI 612
E S+ ++P + LI+ L+ DP+ RP ++++
Sbjct: 232 NEYSIPKHINP------------VAASLIQKMLQTDPTARPTINEL 265
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 107/263 (40%), Gaps = 44/263 (16%)
Query: 363 SVYRGK--IGGDFVAIKKV----------YGDASDQIKLLNKINHSSLIRLLGICFNGGN 410
VYR + G VA+KKV D +I LL ++NH ++I+
Sbjct: 47 EVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE 106
Query: 411 WYLVYENAVNGSLSVWIN--DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIK 468
+V E A G LS I K + + + + + + L ++HS +H+DIK
Sbjct: 107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRV---MHRDIK 163
Query: 469 CSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
+NV + K+ + L R + +VGT YM+PE + + K D++
Sbjct: 164 PANVFITATGVVKLGDLGLGRFFS---SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIW 220
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588
+ G L+ EM + ++P D +N L L Q +YPP+ +
Sbjct: 221 SLGCLLYEM-AALQSP--------FYGDKMN-----------LYSLCKKIEQCDYPPLPS 260
Query: 589 IL----VIRLIESCLKKDPSGRP 607
+ +L+ C+ DP RP
Sbjct: 261 DHYSEELRQLVNMCINPDPEKRP 283
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+I++ + + H +++R+ + YL+ E A G L + K G+F D +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRF-DEQRSATFME 121
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y H +H+DIK N+L+ KIA+F ++ P+ R+
Sbjct: 122 ELADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX------- 171
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+ PE +E K+D++ GVL E L G
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +LS I + LD
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T ++V T+ Y APE + +D+++ GV+M EM+ G
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+I++ + + H +++R+ + YL+ E A G L + K G+F D +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRF-DEQRSATFME 121
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y H +H+DIK N+L+ KIA+F ++ P+ R+
Sbjct: 122 ELADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX------- 171
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+ PE +E K+D++ GVL E L G
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 26/166 (15%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ G YLH +H+D+K N+ L+ D KI +F LA E +GE T + G
Sbjct: 126 IVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKT--LCG 179
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED 566
T Y+APE L S ++DV++ G +M +L GK P E L + L +
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPF---ETSCLKET---YLRIKK 231
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKI 612
E S+ ++P + LI+ L+ DP+ RP ++++
Sbjct: 232 NEYSIPKHINP------------VAASLIQKMLQTDPTARPTINEL 265
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +LS I + LD
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T ++V T+ Y APE + +D+++ GV+M EM+ G
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+I++ + + H +++R+ + YL+ E A G L + K G+F D +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRF-DEQRSATFME 122
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L+Y H +H+DIK N+L+ KIA+F ++ P+ R+
Sbjct: 123 ELADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX------- 172
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+ PE +E K+D++ GVL E L G
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 150
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDV 206
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 207 WSAGCVLAELLLGQ 220
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 21/243 (8%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 64 ETGNHYAMKILDKQKVVKLKEIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
A G + + + G+F + R A V T YLHS +++D+K N+++D
Sbjct: 123 APGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQ 177
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
K+ +F LA+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 178 GYIKVTDFGLAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 538 LSG 540
+G
Sbjct: 232 AAG 234
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 35 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 94
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 95 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 151
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 152 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDV 207
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 208 WSAGCVLAELLLGQ 221
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 62 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 121
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 122 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 178
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 179 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDV 234
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 235 WSAGCVLAELLLGQ 248
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 47 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 106
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 107 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 163
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 164 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDV 219
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 220 WSAGCVLAELLLGQ 233
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 150
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDV 206
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 207 WSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 150
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDV 206
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 207 WSAGCVLAELLLGQ 220
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 106/255 (41%), Gaps = 38/255 (14%)
Query: 386 QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFL--------- 435
++K+L+ + NH +++ LLG C GG ++ E G L ++ K F+
Sbjct: 99 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 158
Query: 436 -------DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
D + + VA G+ +L S +H+D+ N+LL KI +F LA
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLA 215
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
R + + + + + +MAPE + N + + + DV+++G+ + E+ S +P
Sbjct: 216 RDI-KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 274
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ ++ E + + D ++++C DP RP
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPT 317
Query: 609 MDKIAQSISRFLNAS 623
+I Q I + ++ S
Sbjct: 318 FKQIVQLIEKQISES 332
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 53 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 112
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 113 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 169
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 170 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDV 225
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 226 WSAGCVLAELLLGQ 239
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 68 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 128 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 184
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDV 240
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 241 WSAGCVLAELLLGQ 254
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 68 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 128 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 184
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDV 240
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 241 WSAGCVLAELLLGQ 254
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 106/255 (41%), Gaps = 38/255 (14%)
Query: 386 QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFL--------- 435
++K+L+ + NH +++ LLG C GG ++ E G L ++ K F+
Sbjct: 76 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 135
Query: 436 -------DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
D + + VA G+ +L S +H+D+ N+LL KI +F LA
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLA 192
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
R + + + + + +MAPE + N + + + DV+++G+ + E+ S +P
Sbjct: 193 RDI-KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ ++ E + + D ++++C DP RP
Sbjct: 252 PVDSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPT 294
Query: 609 MDKIAQSISRFLNAS 623
+I Q I + ++ S
Sbjct: 295 FKQIVQLIEKQISES 309
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 42 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 101
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 102 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 158
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 159 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDV 214
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 215 WSAGCVLAELLLGQ 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 46 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 105
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 106 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 162
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDV 218
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 219 WSAGCVLAELLLGQ 232
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
Y+V E +L ++ +G + + I++ D LN+ H +H+D+K +N
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGI---IHRDVKPAN 146
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFG 531
+++ K+ +F +AR T+ ++GT Y++PE V + DVY+ G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 532 VLMLEMLSGK 541
++ E+L+G+
Sbjct: 207 CVLYEVLTGE 216
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 135/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
A G + + + G+F + R A V T YLHS +++D+K N+++D
Sbjct: 123 APGGEMFSHLR-RIGRFXEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQ 177
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
K+ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 178 GYIKVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 232 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
Y+V E +L ++ +G + + I++ D LN+ H +H+D+K +N
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGI---IHRDVKPAN 146
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFG 531
+++ K+ +F +AR T+ ++GT Y++PE V + DVY+ G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 532 VLMLEMLSGK 541
++ E+L+G+
Sbjct: 207 CVLYEVLTGE 216
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 106/255 (41%), Gaps = 38/255 (14%)
Query: 386 QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFL--------- 435
++K+L+ + NH +++ LLG C GG ++ E G L ++ K F+
Sbjct: 94 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 153
Query: 436 -------DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
D + + VA G+ +L S +H+D+ N+LL KI +F LA
Sbjct: 154 EDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLA 210
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
R + + + + + +MAPE + N + + + DV+++G+ + E+ S +P
Sbjct: 211 RDI-KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 269
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ ++ E + + D ++++C DP RP
Sbjct: 270 PVDSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPT 312
Query: 609 MDKIAQSISRFLNAS 623
+I Q I + ++ S
Sbjct: 313 FKQIVQLIEKQISES 327
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 70 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 129
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 130 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 186
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 187 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDV 242
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 243 WSAGCVLAELLLGQ 256
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 46 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 105
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 106 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 162
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDV 218
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 219 WSAGCVLAELLLGQ 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 38 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 97
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 98 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 154
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 155 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDV 210
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 211 WSAGCVLAELLLGQ 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
Y+V E +L ++ +G + + I++ D LN+ H +H+D+K +N
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGI---IHRDVKPAN 146
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFG 531
+++ K+ +F +AR T+ ++GT Y++PE V + DVY+ G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 532 VLMLEMLSGK 541
++ E+L+G+
Sbjct: 207 CVLYEVLTGE 216
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 72 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 131
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 132 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 188
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 189 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDV 244
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 245 WSAGCVLAELLLGQ 258
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 39 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 98
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 99 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 155
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 156 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDV 211
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 212 WSAGCVLAELLLGQ 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 32/149 (21%)
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE--- 497
+ I + +A + +LHS +H+D+K SN+ D K+ +F L ++ E E
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 498 ------FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEML------------- 538
+A VGTK YM+PE + S K+D+++ G+++ E+L
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRII 283
Query: 539 ---SGKEAPAL----YSEENMLLVDVLNP 560
+ P L Y +E+M++ D+L+P
Sbjct: 284 TDVRNLKFPLLFTQKYPQEHMMVQDMLSP 312
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 106/255 (41%), Gaps = 38/255 (14%)
Query: 386 QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFL--------- 435
++K+L+ + NH +++ LLG C GG ++ E G L ++ K F+
Sbjct: 99 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 158
Query: 436 -------DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
D + + VA G+ +L S +H+D+ N+LL KI +F LA
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLA 215
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
R + + + + + +MAPE + N + + + DV+++G+ + E+ S +P
Sbjct: 216 RHI-KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 274
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ ++ E + + D ++++C DP RP
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPT 317
Query: 609 MDKIAQSISRFLNAS 623
+I Q I + ++ S
Sbjct: 318 FKQIVQLIEKQISES 332
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
I++ D LN+ H +H+D+K +N+++ K+ +F +AR
Sbjct: 119 IEVIADACQALNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
T+ ++GT Y++PE V + DVY+ G ++ E+L+G+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 135/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHM 63
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
G + + + G+F + R A V T YLHS +++D+K N+L+D
Sbjct: 123 VPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQ 177
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
K+A+F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 178 GYIKVADFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 232 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 32/191 (16%)
Query: 368 KIGGDFVAIKKV---------YGDASDQIKLLNKINHSSLIRLLGI------CFNGGNWY 412
K G+ VAIKK+ A ++ LL + H ++I LL + N ++Y
Sbjct: 64 KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQ-IALDVATGLNYLHSFTNPPHVHKDIKCSN 471
LV + G +F + ++IQ + + GL Y+HS VH+D+K N
Sbjct: 124 LVMPFMQTDLQKI----MGMEFSE--EKIQYLVYQMLKGLKYIHSAGV---VHRDLKPGN 174
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDVYAF 530
+ ++ D KI +F LAR A+ + +T ++V T+ Y APE + + + + +D+++
Sbjct: 175 LAVNEDCELKILDFGLARHADAE-----MTGYVV-TRWYRAPEVILSWMHYNQTVDIWSV 228
Query: 531 GVLMLEMLSGK 541
G +M EML+GK
Sbjct: 229 GCIMAEMLTGK 239
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV D + +++++ K++H +++RL ++ G VY
Sbjct: 113 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 172
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 173 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 229
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 230 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDV 285
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 286 WSAGCVLAELLLGQ 299
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 126
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 127 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 179 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 232
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 233 SILEK--GERLPQ-----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 279
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 280 ARDPQRYL 287
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
I++ D LN+ H +H+D+K +N+++ K+ +F +AR
Sbjct: 136 IEVIADACQALNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
T+ ++GT Y++PE V + DVY+ G ++ E+L+G+
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 10 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 58
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 116
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 117 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 172
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 106/255 (41%), Gaps = 38/255 (14%)
Query: 386 QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFL--------- 435
++K+L+ + NH +++ LLG C GG ++ E G L ++ K F+
Sbjct: 92 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 151
Query: 436 -------DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
D + + VA G+ +L S +H+D+ N+LL KI +F LA
Sbjct: 152 EDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLA 208
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
R + + + + + +MAPE + N + + + DV+++G+ + E+ S +P
Sbjct: 209 RDI-KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 267
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ ++ E + + D ++++C DP RP
Sbjct: 268 PVDSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPT 310
Query: 609 MDKIAQSISRFLNAS 623
+I Q I + ++ S
Sbjct: 311 FKQIVQLIEKQISES 325
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 9 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 57
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 115
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 116 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 171
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 135/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHM 63
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
G + + + G+F + R A V T YLHS +++D+K N+L+D
Sbjct: 123 MPGGDMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQ 177
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
K+A+F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 178 GYIKVADFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 232 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 19/169 (11%)
Query: 386 QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR---- 440
++K+++ + H +++ LLG C +GG ++ E G L ++ K L+++
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 441 ----------IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490
+ + VA G+ +L S +H+D+ NVLL AKI +F LAR
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+ + + + +MAPE + + + + + DV+++G+L+ E+ S
Sbjct: 216 I-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 10 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 58
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 116
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 117 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 172
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 10 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 58
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 116
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 117 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 172
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 10 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 58
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 116
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 117 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 172
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 45/250 (18%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 123
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 124 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P
Sbjct: 176 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-------------- 220
Query: 560 PVLHKEDG--EESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MD 610
DG + +++ + PP+ I V ++ C D RP
Sbjct: 221 ------DGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274
Query: 611 KIAQSISRFL 620
K+A+ R+L
Sbjct: 275 KMARDPQRYL 284
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 76 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 133
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 134 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 185
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 186 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 239
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 240 SILEK--GERLPQ-----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 286
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 287 ARDPQRYL 294
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 135/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
A G + + + G+F + R A V T YLHS +++D+K N+++D
Sbjct: 123 APGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQ 177
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
K+ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 178 GYIKVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 232 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 26/176 (14%)
Query: 386 QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG------------- 431
++K+++ + H +++ LLG C +GG ++ E G L ++ K
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 432 --------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIA 483
G+ L+ + + VA G+ +L S +H+D+ NVLL AKI
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIG 200
Query: 484 NFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+F LAR + + + + +MAPE + + + + + DV+++G+L+ E+ S
Sbjct: 201 DFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 30/252 (11%)
Query: 301 FDSTIVSSSFEACEKASNKKLDEESRDFLESISDIAQSLKVYTFEELQAATDDFNPSCWI 360
D+++ S F E+ +KKL + + L I+DI + +F +
Sbjct: 310 MDTSVFESPFSDPEELKDKKLFLKRDNLL--IADI------------ELGCGNFGS---V 352
Query: 361 KGSVYRGKIGGDFVAIK--KVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNWY 412
+ VYR + VAIK K + +D + ++++++++ ++RL+G+C
Sbjct: 353 RQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 411
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
LV E A G L ++ K + + + ++ V+ G+ YL VH+++ NV
Sbjct: 412 LVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNV 467
Query: 473 LLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 532
LL AKI++F L++ + + S + APE + S++ DV+++GV
Sbjct: 468 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 527
Query: 533 LMLEMLSGKEAP 544
M E LS + P
Sbjct: 528 TMWEALSYGQKP 539
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 126/269 (46%), Gaps = 28/269 (10%)
Query: 321 LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK----GSVYRGKI--GGD 372
L + DFL+ + AQ + + FE ++ T F +K G+ Y KI
Sbjct: 19 LAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 373 FVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432
V +K++ +++ ++L +N L++L + N Y+V E G + + + G
Sbjct: 79 VVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIG 136
Query: 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492
+F + R A V T YLHS +++D+K N+L+D K+A+F A+
Sbjct: 137 RFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK--- 189
Query: 493 RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENM 552
R +G T + GT Y+APE + + + +D +A GVL+ EM +G P ++++ +
Sbjct: 190 RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPI 244
Query: 553 LLVD------VLNPVLHKEDGEESLRHLM 575
+ + V P D ++ LR+L+
Sbjct: 245 QIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 383 ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
A ++ ++L K+N ++ L LV G L I G A+ +
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
A ++ GL LH V++D+K N+LLD +I++ LA EG+
Sbjct: 291 YAAEICCGLEDLHRERI---VYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQ--TIK 343
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
VGT GYMAPE ++N + D +A G L+ EM++G+
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 386 QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++K+++ + H +++ LLG C +GG ++ E G L ++ K + L+ IA
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLETDPAFAIA 157
Query: 445 LDVATGLNYLHSFTNPPH----------VHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494
A+ + LH + +H+D+ NVLL AKI +F LAR
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MN 216
Query: 495 EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+ + + + +MAPE + + + + + DV+++G+L+ E+ S
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
GL Y+HS +H+D+K SNV ++ D +I +F LAR A+ + +T + V T+
Sbjct: 143 GLKYIHSAGI---IHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGY-VATRW 193
Query: 510 YMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
Y APE + N + + +D+++ G +M E+L GK
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
GL Y+HS +H+D+K SNV ++ D +I +F LAR A+ + +T + V T+
Sbjct: 135 GLKYIHSAGI---IHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGY-VATRW 185
Query: 510 YMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
Y APE + N + + +D+++ G +M E+L GK
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
GL Y+HS +H+D+K SNV ++ D +I +F LAR A+ + +T + V T+
Sbjct: 143 GLKYIHSAGI---IHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGY-VATRW 193
Query: 510 YMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
Y APE + N + + +D+++ G +M E+L GK
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 9 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 57
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 115
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 116 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 171
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 383 ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
A ++ ++L K+N ++ L LV G L I G A+ +
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
A ++ GL LH V++D+K N+LLD +I++ LA EG+
Sbjct: 291 YAAEICCGLEDLHRERI---VYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQ--TIK 343
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
VGT GYMAPE ++N + D +A G L+ EM++G+
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC- 127
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 128 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 179
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 180 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 233
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 234 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 281 ARDPQRYL 288
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 362 GSVY--RGKIGGDFVAIKKV----YGDASD--------QIKLLNKINHSSLIRLLGICFN 407
+VY R K VAIKK+ +A D +IKLL +++H ++I LL +
Sbjct: 24 ATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH 83
Query: 408 GGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDI 467
N LV++ + L V I D L + L GL YLH +H+D+
Sbjct: 84 KSNISLVFD-FMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWI---LHRDL 138
Query: 468 KCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENG-LVSTKLD 526
K +N+LLD + K+A+F LA+ + H V T+ Y APE L + +D
Sbjct: 139 KPNNLLLDENGVLKLADFGLAKSFGSPNRAY---XHQVVTRWYRAPELLFGARMYGVGVD 195
Query: 527 VYAFGVLMLEML 538
++A G ++ E+L
Sbjct: 196 MWAVGCILAELL 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 8 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 56
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 57 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 114
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 115 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 170
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 10 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 58
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 116
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 117 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 172
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 9 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 57
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 115
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 116 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 171
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 91 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 148
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 149 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 200
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 201 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 254
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 255 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 301
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 302 ARDPQRYL 309
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 10 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 58
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 116
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 117 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 172
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC- 125
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 126 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 178 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 231
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 232 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 279 ARDPQRYL 286
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 118/243 (48%), Gaps = 21/243 (8%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 64 ETGNHYAMKILDKQKVVKLKEIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
A G + + + G+F + R A V T YLHS +++D+K N+++D
Sbjct: 123 APGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQ 177
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
++ +F LA+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 178 GYIQVTDFGLAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 538 LSG 540
+G
Sbjct: 232 AAG 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC- 130
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 131 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 183 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 236
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 237 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 284 ARDPQRYL 291
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 9 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 57
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 115
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 116 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 171
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVY-GDA--SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV G A + +++++ K++H +++RL ++ G VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 94 LNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 150
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDV 206
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 207 WSAGCVLAELLLGQ 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 9 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 57
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 115
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 116 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 171
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++++ +NH ++++L + YLV E A G + ++ G+ + R +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR- 120
Query: 446 DVATGLNYLHS-FTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
+ + + Y H F VH+D+K N+LLD D KIA+F + EF + +
Sbjct: 121 QIVSAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKL 169
Query: 505 ---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
G+ Y APE + ++DV++ GV++ ++SG
Sbjct: 170 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 9 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 57
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 115
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 116 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 171
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWC- 124
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 125 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 177 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 230
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 231 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 278 ARDPQRYL 285
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC- 123
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 124 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 176 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 229
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 230 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 277 ARDPQRYL 284
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 130
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 131 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 183 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 236
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 237 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 284 ARDPQRYL 291
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC- 124
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 125 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 177 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 230
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 231 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 278 ARDPQRYL 285
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++++ +NH ++++L + YLV E A G + ++ G+ + R +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR- 120
Query: 446 DVATGLNYLHS-FTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
+ + + Y H F VH+D+K N+LLD D KIA+F + EF + +
Sbjct: 121 QIVSAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKL 169
Query: 505 ---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
G+ Y APE + ++DV++ GV++ ++SG
Sbjct: 170 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC- 126
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 127 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 179 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 232
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 233 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 280 ARDPQRYL 287
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 9 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEIXI 57
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 115
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 116 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLP 171
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 55/299 (18%)
Query: 362 GSVYRGKIGGDFVAIKKVYGDASDQIKLLN-KINHSSLIR---LLGICFNGGNWYLVYEN 417
G V+RG G+ VA+K ++ +Q +I ++ L+R +LG +
Sbjct: 22 GEVWRGLWHGESVAVK-IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASD-------MT 73
Query: 418 AVNGSLSVWI---NDKGGKFLDWAQR--------IQIALDVATGLNYLH-----SFTNPP 461
+ N S +W+ + G D+ QR +++A+ A GL +LH + P
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPA 133
Query: 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH-IVGTKGYMAPEYLENGL 520
H+D K NVL+ ++ + IA+ LA + + ++ VGTK YMAPE L+ +
Sbjct: 134 IAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQI 193
Query: 521 VSTKL------DVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESL--- 571
+ D++AFG+++ E+ + + DV+ ED ++ +
Sbjct: 194 RTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVD 253
Query: 572 --------RHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNA 622
R DP + G + +++ C +PS R +I +++ + N+
Sbjct: 254 QQTPTIPNRLAADPVLSG---------LAQMMRECWYPNPSARLTALRIKKTLQKISNS 303
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 9 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEIXI 57
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 115
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 116 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 171
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 125
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 126 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 178 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 231
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 232 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 279 ARDPQRYL 286
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++++ +NH ++++L + YLV E A G + ++ G+ + R +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR- 120
Query: 446 DVATGLNYLHS-FTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
+ + + Y H F VH+D+K N+LLD D KIA+F + EF + +
Sbjct: 121 QIVSAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKL 169
Query: 505 ---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
G+ Y APE + ++DV++ GV++ ++SG
Sbjct: 170 DEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 130
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 131 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 183 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 236
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 237 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 284 ARDPQRYL 291
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++++ +NH ++++L + YLV E A G + ++ G+ + R +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR- 120
Query: 446 DVATGLNYLHS-FTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
+ + + Y H F VH+D+K N+LLD D KIA+F + EF + +
Sbjct: 121 QIVSAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKL 169
Query: 505 ---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
G+ Y APE + ++DV++ GV++ ++SG
Sbjct: 170 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 9 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 57
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 115
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 116 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLP 171
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++ +N L++L + N Y+V E A G + + + G+F + R A
Sbjct: 91 NEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR-RIGRFSEPHARFYAA 149
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D K+A+F A+ R +G T +
Sbjct: 150 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGR---TWXL 199
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 257
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 258 FPSHFSSDLKDLLRNLL 274
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E A G + + + G+F + R A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAA 149
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+++D K+ +F A+ R +G T +
Sbjct: 150 QIVLT-FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGR---TWXL 199
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 257
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 258 FPSHFSSDLKDLLRNLL 274
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 26/166 (15%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ G YLH +H+D+K N+ L+ D KI +F LA E +GE + G
Sbjct: 148 IVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKV--LCG 201
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED 566
T Y+APE L S ++DV++ G +M +L GK P E L + L +
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPF---ETSCLKET---YLRIKK 253
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKI 612
E S+ ++P + LI+ L+ DP+ RP ++++
Sbjct: 254 NEYSIPKHINP------------VAASLIQKMLQTDPTARPTINEL 287
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 9 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 57
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 115
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 116 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLP 171
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 72 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 129
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 130 -----VQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 181
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 182 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 235
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 236 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 282
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 283 ARDPQRYL 290
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 9 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEICI 57
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 115
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 116 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLP 171
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 26/166 (15%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ G YLH +H+D+K N+ L+ D KI +F LA E +GE + G
Sbjct: 124 IVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKV--LCG 177
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED 566
T Y+APE L S ++DV++ G +M +L GK P E L + L +
Sbjct: 178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPF---ETSCLKET---YLRIKK 229
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKI 612
E S+ ++P + LI+ L+ DP+ RP ++++
Sbjct: 230 NEYSIPKHINP------------VAASLIQKMLQTDPTARPTINEL 263
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 126
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 127 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 179 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 232
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 233 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 280 ARDPQRYL 287
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 123
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 124 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 176 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 229
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 230 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 277 ARDPQRYL 284
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWC- 123
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 124 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 176 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 229
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 230 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 277 ARDPQRYL 284
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 123
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 124 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 176 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 229
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 230 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 277 ARDPQRYL 284
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 26/166 (15%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ G YLH +H+D+K N+ L+ D KI +F LA E +GE + G
Sbjct: 150 IVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKV--LCG 203
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED 566
T Y+APE L S ++DV++ G +M +L GK P E L + L +
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPF---ETSCLKET---YLRIKK 255
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKI 612
E S+ ++P + LI+ L+ DP+ RP ++++
Sbjct: 256 NEYSIPKHINP------------VAASLIQKMLQTDPTARPTINEL 289
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 126
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 127 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 179 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 232
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 233 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 280 ARDPQRYL 287
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 334 DIAQSLKVYTFEELQAATDDFNPSCWIKGSVYRGKIGGDFVAIKKVYGDASDQIK---LL 390
D+ Q+L + E+Q A + V + V +K+ D + IK +
Sbjct: 10 DLVQTLGEGAYGEVQLAVN----------RVTEEAVAVKIVDMKRAV-DCPENIKKEIXI 58
Query: 391 NK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT 449
NK +NH ++++ G G YL E G L I G AQR L
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MA 116
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH H+DIK N+LLD KI++F LA R L + + GT
Sbjct: 117 GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLP 172
Query: 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L+ + +DV++ G+++ ML+G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 13/193 (6%)
Query: 360 IKGSVYRGKIGGDFVAIK--KVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNW 411
++ VYR + VAIK K + +D + ++++++++ ++RL+G+C
Sbjct: 26 VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
LV E A G L ++ K + + + ++ V+ G+ YL VH+D+ N
Sbjct: 85 MLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARN 140
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFG 531
VLL AKI++F L++ + + S + APE + S++ DV+++G
Sbjct: 141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 200
Query: 532 VLMLEMLSGKEAP 544
V M E LS + P
Sbjct: 201 VTMWEALSYGQKP 213
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 117/284 (41%), Gaps = 29/284 (10%)
Query: 345 EELQAATDDFNPSCWIKGSVYR--GKIGGDFVAIKKVYGDA--SDQIKLLNKINHSSLIR 400
EE+ AT G V+R K G A+KKV + ++++ + ++
Sbjct: 90 EEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVP 149
Query: 401 LLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNP 460
L G G + E GSL + ++G D A + GL YLHS
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRA--LYYLGQALEGLEYLHSRRI- 206
Query: 461 PHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQE-GEFALTS-HIVGTKGYMAPEYLE 517
+H D+K NVLL +D A + +F A + G+ LT +I GT+ +MAPE +
Sbjct: 207 --LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 518 NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDP 577
K+DV++ +ML ML+G +P G L+ +P
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNG-----------------CHPWTQFFRGPLCLKIASEP 307
Query: 578 SMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621
PP A L + I+ L+K+P R + ++ ++R L
Sbjct: 308 PPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQ 351
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 64
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L +L + N Y+V E
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLTKLEFSFKDNSNLYMVMEY 123
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
A G + + + G+F + R A V T YLHS +++D+K N+++D
Sbjct: 124 APGGEMFSHLR-RIGRFXEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQ 178
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
K+ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 179 GYIKVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 233 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P +++E + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADEPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +LS I + LD
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T ++V T+ Y APE + +D+++ G +M EM+ G
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 60 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 117
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL + VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 118 -----VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 169
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 170 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 223
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 224 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 271 ARDPQRYL 278
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 63 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 120
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 121 -----VQIAEGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 172
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 173 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 226
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 227 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 273
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 274 ARDPQRYL 281
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++++ +NH ++++L + YLV E A G + ++ G+ + R +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR- 121
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI- 504
+ + + Y H VH+D+K N+LLD D KIA+F + EF + + +
Sbjct: 122 QIVSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFS-------NEFTVGNKLD 171
Query: 505 --VGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
G+ Y APE + ++DV++ GV++ ++SG
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++++ +NH ++++L + YLV E A G + ++ G+ + R +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR- 120
Query: 446 DVATGLNYLHS-FTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
+ + + Y H F VH+D+K N+LLD D KIA+F + EF + +
Sbjct: 121 QIVSAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKL 169
Query: 505 ---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
G Y APE + ++DV++ GV++ ++SG
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + F V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + F V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + F V
Sbjct: 130 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF------VA 180
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLMDPSMQ---GNYP 584
P D ++ LR+L+ + GN P
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLP 285
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 17/167 (10%)
Query: 386 QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK------------GG 432
++K+++ + H +++ LLG C +GG ++ E G L ++ K
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492
L + + VA G+ +L S +H+D+ NVLL AKI +F LAR
Sbjct: 159 STLSTRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDI- 214
Query: 493 RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539
+ + + + +MAPE + + + + + DV+++G+L+ E+ S
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 368 KIGGDFVAIK----KVYGDASDQIK---LLNK-INHSSLIRLLGICFNGGNWYLVYENAV 419
++ + VA+K K D + IK +NK +NH ++++ G G YL E
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 420 NGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR 479
G L I G AQR L G+ YLH H+DIK N+LLD
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDN 142
Query: 480 AKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLMLEML 538
KI++F LA R L + + GT Y+APE L+ + +DV++ G+++ ML
Sbjct: 143 LKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 539 SGK 541
+G+
Sbjct: 202 AGE 204
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 41/231 (17%)
Query: 395 HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYL 454
H +I L+ + +LV++ G L ++ +K L + I + +++L
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFL 216
Query: 455 HSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA---RPAERQEGEFALTSHIVGTKGYM 511
H+ VH+D+K N+LLD + + ++++F + P E+ + GT GY+
Sbjct: 217 HANNI---VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK-------LRELCGTPGYL 266
Query: 512 APEYLENGLVST------KLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE 565
APE L+ + T ++D++A GV++ +L+G +P + +L+
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPPFWHRRQILM----------- 313
Query: 566 DGEESLRHLMDPSMQGNYPPV--TAILVIRLIESCLKKDPSGRPAMDKIAQ 614
LR +M+ Q + P + V LI L+ DP R ++ Q
Sbjct: 314 -----LRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVY-GDA--SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV G A + +++++ K++H +++RL ++ G VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 150
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDV 206
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 207 WSAGCVLAELLLGQ 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARFYAA 169
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 170 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 219
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 277
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 278 FPSHFSSDLKDLLRNLL 294
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 45/250 (18%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 100 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 157
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F LA+ +E E+
Sbjct: 158 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 209
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P
Sbjct: 210 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-------------- 254
Query: 560 PVLHKEDG--EESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MD 610
DG + +++ + PP+ I V ++ C D RP
Sbjct: 255 ------DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 308
Query: 611 KIAQSISRFL 620
K+A+ R+L
Sbjct: 309 KMARDPQRYL 318
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 362 GSVYRGKIG-GDFVAIKKVYGDASDQ---------IKLLNKINHSSLIRLLGICFNGGNW 411
G VY+ + G+ A+KK+ + D+ I +L ++ HS++++L +
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
LV+E+ + +GG L+ L + G+ Y H +H+D+K N
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDRRV---LHRDLKPQN 130
Query: 472 VLLDTDFRAKIANFALAR----PAERQEGEFALTSHIVGTKGYMAPEYLE-NGLVSTKLD 526
+L++ + KIA+F LAR P + +H V T Y AP+ L + ST +D
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRK-------YTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 527 VYAFGVLMLEMLSGKEAPALYSEENMLL 554
+++ G + EM++G SE + L+
Sbjct: 184 IWSVGCIFAEMVNGTPLFPGVSEADQLM 211
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 64
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L +L + N Y+V E
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLTKLEFSFKDNSNLYMVMEY 123
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
A G + + + G+F + R A V T YLHS +++D+K N+++D
Sbjct: 124 APGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQ 178
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
K+ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 179 GYIKVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 233 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 362 GSVYRGKI--GGDFVAIKKVY-GDA--SDQIKLLNKINHSSLIRLLGICFNGGNWY-LVY 415
G VY+ K+ G+ VAIKKV G A + +++++ K++H +++RL ++ G VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQI------ALDVATGLNYLHSFTNPPHVHKDIKC 469
N V + + + Q + + + L Y+HSF H+DIK
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKP 150
Query: 470 SNVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDV 527
N+LLD D K+ +F A+ R E + + ++ Y APE + ++ +DV
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDV 206
Query: 528 YAFGVLMLEMLSGK 541
++ G ++ E+L G+
Sbjct: 207 WSAGCVLAELLLGQ 220
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 112/268 (41%), Gaps = 42/268 (15%)
Query: 374 VAIKKVYGDASDQIKL---------LNKINHSSLIRLLGICFNGGNW-----YLVYENAV 419
VA+K + D S Q ++ + +H ++IRLLG+C + ++
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 420 NGSLSVWIN----DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD 475
G L ++ + G K + ++ +D+A G+ YL +N +H+D+ N +L
Sbjct: 125 YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLR 181
Query: 476 TDFRAKIANFALARPAERQEGEFALTSHIVGTK-GYMAPEYLENGLVSTKLDVYAFGVLM 534
D +A+F L++ G++ I ++A E L + + ++K DV+AFGV M
Sbjct: 182 DDMTVCVADFGLSKKI--YSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM 239
Query: 535 LEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRL 594
E+ + P +N + D L + E+ L L + +
Sbjct: 240 WEIATRGMTP-YPGVQNHEMYDYLLHGHRLKQPEDCLDELYE-----------------I 281
Query: 595 IESCLKKDPSGRPAMDKIAQSISRFLNA 622
+ SC + DP RP + + + L +
Sbjct: 282 MYSCWRTDPLDRPTFSVLRLQLEKLLES 309
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 362 GSVYRGKIG-GDFVAIKKVYGDASDQ---------IKLLNKINHSSLIRLLGICFNGGNW 411
G VY+ + G+ A+KK+ + D+ I +L ++ HS++++L +
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
LV+E+ + +GG L+ L + G+ Y H +H+D+K N
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDRRV---LHRDLKPQN 130
Query: 472 VLLDTDFRAKIANFALAR----PAERQEGEFALTSHIVGTKGYMAPEYLE-NGLVSTKLD 526
+L++ + KIA+F LAR P + +H V T Y AP+ L + ST +D
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRK-------YTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 527 VYAFGVLMLEMLSGKEAPALYSEENMLL 554
+++ G + EM++G SE + L+
Sbjct: 184 IWSVGCIFAEMVNGAPLFPGVSEADQLM 211
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 135/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
A G + + + G+F + R A V T YLHS +++D+K N+++D
Sbjct: 123 APGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQ 177
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
++ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 178 GYIQVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 232 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+I L + H +I+L + + +V E A G L +I +K D +R +
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQI 117
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
A + H VH+D+K N+LLD + KIA+F L+ +G F TS
Sbjct: 118 ICAIEYCHRHKI-----VHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKTS--C 168
Query: 506 GTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSGK 541
G+ Y APE + L + ++DV++ G+++ ML G+
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++++ +NH ++++L + YL+ E A G + ++ G + + R +
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFR- 118
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI- 504
+ + + Y H VH+D+K N+LLD D KIA+F + EF + +
Sbjct: 119 QIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS-------NEFTVGGKLD 168
Query: 505 --VGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
G+ Y APE + ++DV++ GV++ ++SG
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARFYAA 143
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 144 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 193
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 194 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 251
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 252 FPSHFSSDLKDLLRNLL 268
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 30/166 (18%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSL------SVWINDKGGKFLDWAQ 439
+++++ +NH ++++L + YLV E A G + W+ +K + A+
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEAR----AK 111
Query: 440 RIQIALDVATGLNYLHS-FTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF 498
QI + + Y H F VH+D+K N+LLD D KIA+F + EF
Sbjct: 112 FRQIV----SAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADFGFS-------NEF 156
Query: 499 ALTSHI---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
+ + G+ Y APE + ++DV++ GV++ ++SG
Sbjct: 157 TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
+++ +L ++H ++++L + N+YLV E G L I + KF + + I
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR-MKFNEVDAAV-II 142
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT---DFRAKIANFALARPAERQEGEFALT 501
V +G+ YLH VH+D+K N+LL++ D KI +F L+ E Q+
Sbjct: 143 KQVLSGVTYLHKHNI---VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK----M 195
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+GT Y+APE L K DV++ GV++ +L+G
Sbjct: 196 KERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAG 233
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +LS I + LD
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T ++V T+ Y APE + +D+++ G +M EM+ G
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 117/284 (41%), Gaps = 29/284 (10%)
Query: 345 EELQAATDDFNPSCWIKGSVYR--GKIGGDFVAIKKVYGDA--SDQIKLLNKINHSSLIR 400
EE+ AT G V+R K G A+KKV + ++++ + ++
Sbjct: 71 EEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVP 130
Query: 401 LLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNP 460
L G G + E GSL + ++G D A + GL YLHS
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRA--LYYLGQALEGLEYLHSRRI- 187
Query: 461 PHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQE-GEFALTS-HIVGTKGYMAPEYLE 517
+H D+K NVLL +D A + +F A + G+ LT +I GT+ +MAPE +
Sbjct: 188 --LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 518 NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDP 577
K+DV++ +ML ML+G +P G L+ +P
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNG-----------------CHPWTQFFRGPLCLKIASEP 288
Query: 578 SMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621
PP A L + I+ L+K+P R + ++ ++R L
Sbjct: 289 PPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQ 332
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 111/279 (39%), Gaps = 52/279 (18%)
Query: 362 GSVYRGKIGGDF------VAIKKVYGDAS--------DQIKLLNKINHSSLIRLLGICFN 407
G+VY+G D VAIK + + S D+ ++ + + RLLGIC
Sbjct: 31 GTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLT 90
Query: 408 GGNWYLVYENAVNGSLSVWINDKGGKF-----LDWAQRIQIALDVATGLNYLHSFTNPPH 462
LV + G L + + G+ L+W +I A G++YL
Sbjct: 91 S-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYLEDVR---L 140
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVS 522
VH+D+ NVL+ + KI +F LAR + E E+ V K +MA E + +
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK-WMALESILRRRFT 199
Query: 523 TKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG--EESLRHLMDPSMQ 580
+ DV+++GV + E+++ P DG + L++ +
Sbjct: 200 HQSDVWSYGVTVWELMTFGAKPY--------------------DGIPAREIPDLLEKGER 239
Query: 581 GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619
PP+ I V ++ C D RP ++ SR
Sbjct: 240 LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 393 INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLN 452
+NH ++++ G G YL E G L I G AQR L G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVV 119
Query: 453 YLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512
YLH H+DIK N+LLD KI++F LA R L + + GT Y+A
Sbjct: 120 YLHGIGI---THRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVA 175
Query: 513 PEYLENG-LVSTKLDVYAFGVLMLEMLSGK 541
PE L+ + +DV++ G+++ ML+G+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC- 125
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F A+ +E E+
Sbjct: 126 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 178 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 231
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 232 SILEK--GERLPQ-----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 279 ARDPQRYL 286
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFAEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
G + + + G+F + R A V T YLHS +++D+K N+L+D
Sbjct: 123 VPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQ 177
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
++ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 178 GYIQVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 232 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 121/253 (47%), Gaps = 23/253 (9%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 64
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
G + + + G+F + R A V T YLHS +++D+K N+L+D
Sbjct: 124 VPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQ 178
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
++ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 179 GYIQVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 538 LSGKEAPALYSEE 550
+G P ++++
Sbjct: 233 AAG--YPPFFADQ 243
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 125/269 (46%), Gaps = 28/269 (10%)
Query: 321 LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK----GSVYRGKI--GGD 372
L + DFL+ + AQ + + FE ++ T F +K G+ Y KI
Sbjct: 20 LAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 79
Query: 373 FVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432
V +K++ +++ ++L +N L +L + N Y+V E A G + + + G
Sbjct: 80 VVKLKQIEHTLNEK-RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIG 137
Query: 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492
+F + R A V T YLHS +++D+K N+++D K+ +F A+
Sbjct: 138 RFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK--- 190
Query: 493 RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENM 552
R +G T + GT Y+APE + + + +D +A GVL+ EM +G P ++++ +
Sbjct: 191 RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPI 245
Query: 553 LLVD------VLNPVLHKEDGEESLRHLM 575
+ + V P D ++ LR+L+
Sbjct: 246 QIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+I+++ ++H ++IRL + + YLV E G L + K + + +I
Sbjct: 56 EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK--RVFRESDAARIMK 113
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDT---DFRAKIANFALARPAERQEGEFALTS 502
DV + + Y H H+D+K N L T D K+ +F LA A + G+ T
Sbjct: 114 DVLSAVAYCHKLNV---AHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTK 168
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
VGT Y++P+ LE GL + D ++ GV+M +L G
Sbjct: 169 --VGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
G + + + G+F + R A V T YLHS +++D+K N+L+D
Sbjct: 123 VAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQ 177
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
++ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 178 GYIQVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 232 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +LS I + LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T ++V T+ Y APE + +D+++ G +M EM+ G
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++++ +NH ++++L + YL+ E A G + ++ G+ + R +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFR- 121
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI- 504
+ + + Y H VH+D+K N+LLD D KIA+F + EF + +
Sbjct: 122 QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFS-------NEFTVGGKLD 171
Query: 505 --VGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
G Y APE + ++DV++ GV++ ++SG
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +LS I + LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T ++V T+ Y APE + +D+++ G +M EM+ G
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 125
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F A+ +E E+
Sbjct: 126 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 178 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 231
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 232 SILEK--GERLPQ-----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 279 ARDPQRYL 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 362 GSVYRGKIG-GDFVAIKKVYGDASDQ---------IKLLNKINHSSLIRLLGICFNGGNW 411
G VY+ + G+ A+KK+ + D+ I +L ++ HS++++L +
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
LV+E+ + +GG L+ L + G+ Y H +H+D+K N
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDRRV---LHRDLKPQN 130
Query: 472 VLLDTDFRAKIANFALAR----PAERQEGEFALTSHIVGTKGYMAPEYLE-NGLVSTKLD 526
+L++ + KIA+F LAR P + +H + T Y AP+ L + ST +D
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRK-------YTHEIVTLWYRAPDVLMGSKKYSTTID 183
Query: 527 VYAFGVLMLEMLSGKEAPALYSEENMLL 554
+++ G + EM++G SE + L+
Sbjct: 184 IWSVGCIFAEMVNGTPLFPGVSEADQLM 211
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 34/230 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+I++ ++H +++RL ++ YL+ E A G L + K F D + I
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ-KSCTF-DEQRTATIME 130
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF--ALARPAERQEGEFALTSH 503
++A L Y H +H+DIK N+LL KIA+F ++ P+ R++
Sbjct: 131 ELADALMYCHGKKV---IHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT------- 180
Query: 504 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563
+ GT Y+ PE +E + + K+D++ GVL E+L G NP
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG------------------NPPFE 222
Query: 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIA 613
E+ R ++ ++ +P LI L+ +PS R + +++
Sbjct: 223 SASHNETYRRIVKVDLK--FPASVPTGAQDLISKLLRHNPSERLPLAQVS 270
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 380 YGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGS---LSVWINDKGGKFLD 436
Y A + K+L K+ HS I L F + +NG ++ D+
Sbjct: 229 YQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ I + +GL +LH +++D+K NVLLD D +I++ LA E + G
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAG 342
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
+ T GT G+MAPE L +D +A GV + EM++ +
Sbjct: 343 Q-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+I+++ ++H ++IRL + + YLV E G L + K + + +I
Sbjct: 73 EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK--RVFRESDAARIMK 130
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA---KIANFALARPAERQEGEFALTS 502
DV + + Y H H+D+K N L TD K+ +F LA A + G+ T
Sbjct: 131 DVLSAVAYCHKLNV---AHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTK 185
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
VGT Y++P+ LE GL + D ++ GV+M +L G
Sbjct: 186 --VGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 125/269 (46%), Gaps = 28/269 (10%)
Query: 321 LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK----GSVYRGKI--GGD 372
L + DFL+ + AQ + + FE ++ T F +K G+ Y KI
Sbjct: 19 LAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 373 FVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432
V +K++ +++ ++L +N L++L + N Y+V E G + + + G
Sbjct: 79 VVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIG 136
Query: 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492
+F + R A V T YLHS +++D+K N+L+D ++ +F A+
Sbjct: 137 RFXEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 493 RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENM 552
R +G T + GT Y+APE + + + +D +A GVL+ EM +G P ++++ +
Sbjct: 190 RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPI 244
Query: 553 LLVD------VLNPVLHKEDGEESLRHLM 575
+ + V P D ++ LR+L+
Sbjct: 245 QIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 366 RGKIGGDFVAIKKV-----YGDAS--DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENA 418
+ ++ G A+K + + D+S ++I +L KI H +++ L I + ++YLV +
Sbjct: 29 KQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88
Query: 419 VNGSLSVWINDKG-GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL--- 474
G L I ++G D + IQ V + + YLH VH+D+K N+L
Sbjct: 89 SGGELFDRILERGVYTEKDASLVIQ---QVLSAVKYLH---ENGIVHRDLKPENLLYLTP 142
Query: 475 DTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLM 534
+ + + I +F L++ + + S GT GY+APE L S +D ++ GV+
Sbjct: 143 EENSKIMITDFGLSKMEQN-----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197
Query: 535 LEMLSGKEAPALYSE 549
+L G P Y E
Sbjct: 198 YILLCG--YPPFYEE 210
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG-KFLDWAQRIQIA 444
+I +L +++H ++I+L I LV E G L I +KG D A ++
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI 157
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT---DFRAKIANFALARPAERQEGEFALT 501
L+ + YLH VH+D+K N+L T D KIA+F L++ E Q L
Sbjct: 158 LE---AVAYLHENGI---VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ----VLM 207
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKE 542
+ GT GY APE L ++D+++ G++ +L G E
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE 248
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 135
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 136 QIVLT-FEYLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAK---RVKGR---TWXL 185
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 243
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 244 FPSHFSSDLKDLLRNLL 260
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 380 YGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGS---LSVWINDKGGKFLD 436
Y A + K+L K+ HS I L F + +NG ++ D+
Sbjct: 229 YQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ I + +GL +LH +++D+K NVLLD D +I++ LA E + G
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAG 342
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
+ T GT G+MAPE L +D +A GV + EM++ +
Sbjct: 343 Q-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 380 YGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGS---LSVWINDKGGKFLD 436
Y A + K+L K+ HS I L F + +NG ++ D+
Sbjct: 229 YQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ I + +GL +LH +++D+K NVLLD D +I++ LA E + G
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAG 342
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
+ T GT G+MAPE L +D +A GV + EM++ +
Sbjct: 343 Q-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARFYAA 141
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 142 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 191
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 249
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 250 FPSHFSSDLKDLLRNLL 266
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 149
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 150 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 199
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 257
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 258 FPSHFSSDLKDLLRNLL 274
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 380 YGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGS---LSVWINDKGGKFLD 436
Y A + K+L K+ HS I L F + +NG ++ D+
Sbjct: 229 YQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ I + +GL +LH +++D+K NVLLD D +I++ LA E + G
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAG 342
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
+ T GT G+MAPE L +D +A GV + EM++ +
Sbjct: 343 Q-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 40/251 (15%)
Query: 377 KKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK--- 433
++ + +D + + ++H+ ++RLLG+C G + LV + GSL + G
Sbjct: 56 RQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGP 114
Query: 434 --FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR-- 489
L+W + +A G+ YL VH+++ NVLL + + ++A+F +A
Sbjct: 115 QLLLNW------GVQIAKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLL 165
Query: 490 -PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
P ++Q L S +MA E + G + + DV+++GV + E+++ P Y+
Sbjct: 166 PPDDKQ----LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP--YA 219
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ L +V + L++ + P + I V ++ C D + RP
Sbjct: 220 --GLRLAEVPD--------------LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPT 263
Query: 609 MDKIAQSISRF 619
++A +R
Sbjct: 264 FKELANEFTRM 274
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ LL +NH ++I LL + + YLV E ++ +L I+ + LD
Sbjct: 68 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIHME----LD 122
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 123 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---ST 176
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T ++V T+ Y APE + +D+++ G +M E++ G
Sbjct: 177 NFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 40/251 (15%)
Query: 377 KKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK--- 433
++ + +D + + ++H+ ++RLLG+C G + LV + GSL + G
Sbjct: 74 RQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGP 132
Query: 434 --FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR-- 489
L+W + +A G+ YL VH+++ NVLL + + ++A+F +A
Sbjct: 133 QLLLNW------GVQIAKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLL 183
Query: 490 -PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
P ++Q L S +MA E + G + + DV+++GV + E+++ P Y+
Sbjct: 184 PPDDKQ----LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP--YA 237
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ L +V + L++ + P + I V ++ C D + RP
Sbjct: 238 --GLRLAEVPD--------------LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPT 281
Query: 609 MDKIAQSISRF 619
++A +R
Sbjct: 282 FKELANEFTRM 292
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
G + + + G+F + R A V T YLHS +++D+K N+L+D
Sbjct: 123 VPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQ 177
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
++ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 178 GYIQVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 232 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 64
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
G + + + G+F + R A V T YLHS +++D+K N+L+D
Sbjct: 124 VPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQ 178
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
++ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 179 GYIQVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 233 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 139 ILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY------VA 189
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 139 ILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY------VA 189
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 125/269 (46%), Gaps = 28/269 (10%)
Query: 321 LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK----GSVYRGKI--GGD 372
L + DFL+ + AQ + + FE ++ T F +K G+ Y KI
Sbjct: 19 LAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 78
Query: 373 FVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432
V +K++ +++ ++L +N L++L + N Y+V E G + + + G
Sbjct: 79 VVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIG 136
Query: 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492
+F + R A V T YLHS +++D+K N+L+D ++ +F A+
Sbjct: 137 RFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 493 RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENM 552
R +G T + GT Y+APE + + + +D +A GVL+ EM +G P ++++ +
Sbjct: 190 RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPI 244
Query: 553 LLVD------VLNPVLHKEDGEESLRHLM 575
+ + V P D ++ LR+L+
Sbjct: 245 QIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
G + + + G+F + R A V T YLHS +++D+K N+L+D
Sbjct: 123 VPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQ 177
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
++ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 178 GYIQVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 232 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC- 125
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F A+ +E E+
Sbjct: 126 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 178 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 231
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 232 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 279 ARDPQRYL 286
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 145 ILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY------VA 195
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 115/271 (42%), Gaps = 53/271 (19%)
Query: 362 GSVYRGKIGGDFVAIK---------KVYGDASDQIKLLNKINHSSLIRLLGICFN--GGN 410
G +++G+ G+ + +K + D +++ L +H +++ +LG C + +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTN--PPHVHKDIK 468
L+ GSL +++ +D +Q ++ ALD A G +LH+ P H +
Sbjct: 84 PTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA---LN 140
Query: 469 CSNVLLDTDFRAKIA----NFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTK 524
+V +D D A+I+ F+ P ++APE L+ T
Sbjct: 141 SRSVXIDEDXTARISXADVKFSFQSPGRXY------------APAWVAPEALQKKPEDTN 188
Query: 525 ---LDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQG 581
D ++F VL+ E+++ +E P D+ N + + E LR P++
Sbjct: 189 RRSADXWSFAVLLWELVT-REVP---------FADLSNXEIGXKVALEGLR----PTI-- 232
Query: 582 NYPPVTAILVIRLIESCLKKDPSGRPAMDKI 612
PP + V +L + C +DP+ RP D I
Sbjct: 233 --PPGISPHVSKLXKICXNEDPAKRPKFDXI 261
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ + AQ + + FE ++ T F +K
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 64
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
G + + + G+F + R A V T YLHS +++D+K N+L+D
Sbjct: 124 VPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQ 178
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
++ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 179 GYIQVTDFGFAK---RVKGR---TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 233 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAA 141
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 142 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 191
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 249
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 250 FPSHFSSDLKDLLRNLL 266
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 40/196 (20%)
Query: 366 RGKIGGDFVAIKKVYGDASD---------QIKLLNKINHSSLIRLLGICFNGGNWYLVYE 416
R + G VAIKK D +I++L ++ H +L+ LL + +LV+E
Sbjct: 23 RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82
Query: 417 NAVNGSLSVWINDKGGKFLDWAQR-------IQIALDVATGLNYLHSFTNPPHVHKDIKC 469
+ L LD QR I +N+ H +H+D+K
Sbjct: 83 YCDHTVLHE---------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC---IHRDVKP 130
Query: 470 SNVLLDTDFRAKIANFALAR----PAERQEGEFALTSHIVGTKGYMAPEYL-ENGLVSTK 524
N+L+ K+ +F AR P++ + E V T+ Y +PE L +
Sbjct: 131 ENILITKHSVIKLCDFGFARLLTGPSDYYDDE-------VATRWYRSPELLVGDTQYGPP 183
Query: 525 LDVYAFGVLMLEMLSG 540
+DV+A G + E+LSG
Sbjct: 184 VDVWAIGCVFAELLSG 199
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 125/269 (46%), Gaps = 28/269 (10%)
Query: 321 LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK----GSVYRGKI--GGD 372
L + DFL+ + AQ + + FE ++ T F +K G+ Y KI
Sbjct: 5 LAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK 64
Query: 373 FVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432
V +K++ +++ ++L +N L++L + N Y+V E G + + + G
Sbjct: 65 VVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIG 122
Query: 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492
+F + R A V T YLHS +++D+K N+L+D ++ +F A+
Sbjct: 123 RFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--- 175
Query: 493 RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENM 552
R +G T + GT Y+APE + + + +D +A GVL+ EM +G P ++++ +
Sbjct: 176 RVKGR---TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPI 230
Query: 553 LLVD------VLNPVLHKEDGEESLRHLM 575
+ + V P D ++ LR+L+
Sbjct: 231 QIYEKIVSGKVRFPSHFSSDLKDLLRNLL 259
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 133/284 (46%), Gaps = 29/284 (10%)
Query: 307 SSSFEACEKASNKK-LDEESRDFLESISDIAQ-SLKVYTFEELQA-ATDDFNPSCWIK-- 361
+++ + E+ S K+ L + DFL+ AQ + + FE ++ T F +K
Sbjct: 25 AAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK 84
Query: 362 --GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417
G+ Y KI V +K++ +++ ++L +N L++L + N Y+V E
Sbjct: 85 ETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD 477
G + + + G+F + R A V T YLHS +++D+K N+L+D
Sbjct: 144 VPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQ 198
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEM 537
++ +F A+ R +G T + GT Y+APE + + + +D +A GVL+ EM
Sbjct: 199 GYIQVTDFGFAK---RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 538 LSGKEAPALYSEENMLLVD------VLNPVLHKEDGEESLRHLM 575
+G P ++++ + + + V P D ++ LR+L+
Sbjct: 253 AAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 294
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 130
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F A+ +E E+
Sbjct: 131 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 182
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 183 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 236
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 237 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 284 ARDPQRYL 291
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC- 127
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F A+ +E E+
Sbjct: 128 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 179
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 180 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 233
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 234 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 281 ARDPQRYL 288
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAA 149
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 150 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 199
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 257
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 258 FPSHFSSDLKDLLRNLL 274
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+++D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 169
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ + T +
Sbjct: 170 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GATWTL 219
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 277
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 278 FPSHFSSDLKDLLRNLL 294
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ LL +NH ++I LL + + YLV E ++ +L I+ + LD
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIHME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---CT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T ++V T+ Y APE + + +D+++ G +M E++ G
Sbjct: 179 NFMMTPYVV-TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME----LD 162
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 216
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 217 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAA 149
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 150 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 199
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 257
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 258 FPSHFSSDLKDLLRNLL 274
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 130 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 180
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 131 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 181
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAA 149
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 150 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 199
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 257
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 258 FPSHFSSDLKDLLRNLL 274
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 132 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 182
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 139 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 189
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 131 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 181
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 133 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 183
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQME----LD 117
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 118 HERMSYLLYQMLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA---GT 171
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 172 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 139 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 189
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 136 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 186
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 136 ILRGLKYIHSADI---IHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY------VA 186
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 140 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 190
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 146 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 196
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 41/248 (16%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK----GGKFL-DWAQ 439
D+ ++ +++ + RLLGIC L+ + G L ++ + G ++L +W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC- 123
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ +A G+NYL VH+D+ NVL+ T KI +F A+ +E E+
Sbjct: 124 -----VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 175
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559
V K +MA E + + + + + DV+++GV + E+++ P + + ++
Sbjct: 176 AEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEIS 229
Query: 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-------MDKI 612
+L K GE + PP+ I V ++ C D RP K+
Sbjct: 230 SILEK--GERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
Query: 613 AQSISRFL 620
A+ R+L
Sbjct: 277 ARDPQRYL 284
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 144 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 194
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 136 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 186
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 141 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 191
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 153 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 203
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 140 ILRGLKYIHSADI---IHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY------VA 190
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKD 466
+ N YLV + V G L ++ + + R +A ++ ++ +H +VH+D
Sbjct: 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLA-EMVIAIDSVHQLH---YVHRD 200
Query: 467 IKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLE-----NGLV 521
IK N+L+D + ++A+F + E +S VGT Y++PE L+ G
Sbjct: 201 IKPDNILMDMNGHIRLADFGSC--LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRY 258
Query: 522 STKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVL-HKE 565
+ D ++ GV M EML G E P Y+E LV+ ++ HKE
Sbjct: 259 GPECDWWSLGVCMYEMLYG-ETP-FYAES---LVETYGKIMNHKE 298
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 136 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 186
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 146 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 196
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 386 QIKLLNKINHSSLIRLLGIC--------FNGGNWYLVYENAVNGSLSVWINDKGGKFLDW 437
+++LL + H ++I LL + FN + YLV + + L+ + K K D
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFN--DVYLV-THLMGADLNNIV--KCQKLTD- 153
Query: 438 AQRIQIAL-DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+Q + + GL Y+HS +H+D+K SN+ ++ D KI +F LAR + +
Sbjct: 154 -DHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 209
Query: 497 EFALTSHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
+ V T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 210 GY------VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 154 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 204
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 130 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 180
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 146 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 196
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 386 QIKLLNKINHSSLIRLLGIC--------FNGGNWYLVYENAVNGSLSVWINDKGGKFLDW 437
+++LL + H ++I LL + FN + YLV + + L+ + K K D
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFN--DVYLV-THLMGADLNNIV--KCAKLTD- 120
Query: 438 AQRIQIAL-DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+Q + + GL Y+HS +H+D+K SN+ ++ D KI +F LAR + +
Sbjct: 121 -DHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176
Query: 497 EFALTSHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
+ V T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 177 GY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 154 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 204
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGXVA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 157 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 207
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 157 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY------VA 207
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 145 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 195
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 153 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 203
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 140 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 190
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 140 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VA 190
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME----LD 162
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 216
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 217 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+APE + + + +D +A GVL+ +M +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 26/239 (10%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
+++K++H L+ G+CF G LV E GSL ++ K ++ ++++A +A
Sbjct: 65 MMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLA 123
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
+++L T +H ++ N+LL + K N + ++ L I+ +
Sbjct: 124 WAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER 180
Query: 509 -GYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED 566
++ PE +EN ++ D ++FG + E+ SG + P L D
Sbjct: 181 IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP-----------------LSALD 223
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLA 625
+ L+ D + P A + LI +C+ +P RP+ I + ++ L
Sbjct: 224 SQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++++ +NH ++++L + YLV E A G + ++ G+ + R +
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLV-AHGRXKEKEARAKFR- 120
Query: 446 DVATGLNYLHS-FTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
+ + + Y H F VH+D+K N+LLD D KIA+F + EF + +
Sbjct: 121 QIVSAVQYCHQKFI----VHRDLKAENLLLDADXNIKIADFGFS-------NEFTFGNKL 169
Query: 505 ---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSG 540
G Y APE + ++DV++ GV++ ++SG
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 71 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME----LD 125
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 179
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 180 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +L I + LD
Sbjct: 71 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LD 125
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 179
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T ++V T+ Y APE + +D+++ G +M EM+ G
Sbjct: 180 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +L I + LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T ++V T+ Y APE + +D+++ G +M EM+ G
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 64 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME----LD 118
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 172
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 173 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +L I + LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T ++V T+ Y APE + +D+++ G +M EM+ G
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 71 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME----LD 125
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 179
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 180 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 69 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME----LD 123
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 124 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 177
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 178 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 64 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME----LD 118
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 172
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 173 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME----LD 117
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 171
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 172 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + YLV E ++ +L I + LD
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
YLV + V G L ++ K + R I ++ ++ +H +VH+DIK N
Sbjct: 166 YLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG-EMVLAIDSIHQLH---YVHRDIKPDN 221
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGL--VSTKLD 526
VLLD + ++A+F + + +S VGT Y++PE L E+G+ + D
Sbjct: 222 VLLDVNGHIRLADFGSC--LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECD 279
Query: 527 VYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586
++ GV M EML G E P Y+E LV+ +++ E+ + H+ D S +
Sbjct: 280 WWSLGVCMYEMLYG-ETP-FYAES---LVETYGKIMNHEERFQFPSHVTDVSEEAK---- 330
Query: 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWELSKNIS 633
L+ RLI C ++ G+ ++ + L WE +N+
Sbjct: 331 --DLIQRLI--CSRERRLGQNGIEDFKKHA---FFEGLNWENIRNLE 370
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +L I + LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 178
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F +T +V T+ Y APE + +D+++ G +M EM+ G
Sbjct: 179 SFMMTPEVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK--GGKFLDWAQRIQI 443
+I++L K+NH +I++ F+ ++Y+V E G L DK G K L A
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF----DKVVGNKRLKEATCKLY 119
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEGEFAL 500
+ + YLH +H+D+K NVLL + D KI +F ++ GE +L
Sbjct: 120 FYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSL 172
Query: 501 TSHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+APE L + + +D ++ GV++ LSG
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
YLV + V G L ++ K + R I ++ ++ +H +VH+DIK N
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG-EMVLAIDSIHQLH---YVHRDIKPDN 205
Query: 472 VLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL---ENGL--VSTKLD 526
VLLD + ++A+F + + +S VGT Y++PE L E+G+ + D
Sbjct: 206 VLLDVNGHIRLADFGSC--LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECD 263
Query: 527 VYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586
++ GV M EML G E P Y+E LV+ +++ E+ + H+ D S +
Sbjct: 264 WWSLGVCMYEMLYG-ETP-FYAES---LVETYGKIMNHEERFQFPSHVTDVSEEAK---- 314
Query: 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWELSKNIS 633
L+ RLI C ++ G+ ++ + L WE +N+
Sbjct: 315 --DLIQRLI--CSRERRLGQNGIEDFKKHA---FFEGLNWENIRNLE 354
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR + + V
Sbjct: 154 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MXGXVA 204
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH N +H+D+K N+ L+ D KI +F LA E +GE T + GT
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKT--LCGTPN 207
Query: 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L S ++D+++ G ++ +L GK
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR-PAERQEGEFALTSHIV 505
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR A+ G V
Sbjct: 141 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG-------YV 190
Query: 506 GTKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK--GGKFLDWAQRIQI 443
+I++L K+NH +I++ F+ ++Y+V E G L DK G K L A
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF----DKVVGNKRLKEATCKLY 119
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEGEFAL 500
+ + YLH +H+D+K NVLL + D KI +F ++ GE +L
Sbjct: 120 FYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSL 172
Query: 501 TSHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+APE L + + +D ++ GV++ LSG
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR-PAERQEGEFALTSHIV 505
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR A+ G V
Sbjct: 141 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG-------YV 190
Query: 506 GTKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK--GGKFLDWAQRIQI 443
+I++L K+NH +I++ F+ ++Y+V E G L DK G K L A
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF----DKVVGNKRLKEATCKLY 119
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEGEFAL 500
+ + YLH +H+D+K NVLL + D KI +F ++ GE +L
Sbjct: 120 FYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSL 172
Query: 501 TSHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+APE L + + +D ++ GV++ LSG
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK--GGKFLDWAQRIQI 443
+I++L K+NH +I++ F+ ++Y+V E G L DK G K L A
Sbjct: 64 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF----DKVVGNKRLKEATCKLY 118
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEGEFAL 500
+ + YLH +H+D+K NVLL + D KI +F ++ GE +L
Sbjct: 119 FYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSL 171
Query: 501 TSHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+APE L + + +D ++ GV++ LSG
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI F LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR-PAERQEGEFALTSHIV 505
+ GL Y+HS +H+D+K SN+ ++ D KI +F LAR A+ G V
Sbjct: 141 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG-------YV 190
Query: 506 GTKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK--GGKFLDWAQRIQI 443
+I++L K+NH +I++ F+ ++Y+V E G L DK G K L A
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF----DKVVGNKRLKEATCKLY 125
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEGEFAL 500
+ + YLH +H+D+K NVLL + D KI +F ++ GE +L
Sbjct: 126 FYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSL 178
Query: 501 TSHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+APE L + + +D ++ GV++ LSG
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 362 GSVYRGK--IGGDFVAIKKVYGDASDQ-------IKLLNKINHSSLIRLLGICFNGGNWY 412
G VY+ K G A K + + ++ I++L +H +++LLG ++ G +
Sbjct: 33 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92
Query: 413 LVYENAVNGSLSVWIN--DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ E G++ + D+G L Q + + LN+LHS +H+D+K
Sbjct: 93 IMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHSKRI---IHRDLKAG 146
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEY-----LENGLVSTKL 525
NVL+ + ++A+F + + + +GT +MAPE +++ K
Sbjct: 147 NVLMTLEGDIRLADFGV---SAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 203
Query: 526 DVYAFGVLMLEM 537
D+++ G+ ++EM
Sbjct: 204 DIWSLGITLIEM 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 362 GSVYRGK--IGGDFVAIKKVYGDASDQ-------IKLLNKINHSSLIRLLGICFNGGNWY 412
G VY+ K G A K + + ++ I++L +H +++LLG ++ G +
Sbjct: 25 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 84
Query: 413 LVYENAVNGSLSVWIN--DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
++ E G++ + D+G L Q + + LN+LHS +H+D+K
Sbjct: 85 IMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHSKRI---IHRDLKAG 138
Query: 471 NVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEY-----LENGLVSTKL 525
NVL+ + ++A+F ++ + +GT +MAPE +++ K
Sbjct: 139 NVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 195
Query: 526 DVYAFGVLMLEM 537
D+++ G+ ++EM
Sbjct: 196 DIWSLGITLIEM 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI ++ LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSL--SVWINDKGGKFLDWAQRIQ 442
D++ +L +++H ++++L + N+YLV E G L + + K + +D A
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE-VDAA---V 125
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFA 499
I V +G YLH VH+D+K N+LL++ R KI +F L+ A + G
Sbjct: 126 IMKQVLSGTTYLHKHNI---VHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVG--G 178
Query: 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+GT Y+APE L K DV++ GV++ +L G
Sbjct: 179 KMKERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 218
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 125/300 (41%), Gaps = 54/300 (18%)
Query: 364 VYRGKIGGDFVAIKKVYGDASD----QIKLLNKIN-HSSLIRLLGICFNGGNWYLVYE-- 416
V++G G VA+K++ D D +IKLL + + H ++IR Y+ E
Sbjct: 50 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 109
Query: 417 --NAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
N + S ++D+ K I + +A+G+ +LHS +H+D+K N+L+
Sbjct: 110 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILV 166
Query: 475 DT-------------DFRAKIANFALARPAERQEGEFALT-SHIVGTKGYMAPEYLENGL 520
T + R I++F L + + + F ++ GT G+ APE LE
Sbjct: 167 STSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEEST 226
Query: 521 ---VSTKLDVYAFGVLMLEMLSGKEAP--ALYSEENMLLVDVLNPVLHKEDGEESLRHLM 575
++ +D+++ G + +LS + P YS E+ ++ + + + ++ L
Sbjct: 227 KRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL--------DEMKCLH 278
Query: 576 DPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWELSKNISEL 635
D S+ LI + DP RP K+ L L W SK + L
Sbjct: 279 DRSLIAE--------ATDLISQMIDHDPLKRPTAMKV-------LRHPLFWPKSKKLEFL 323
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 125/300 (41%), Gaps = 54/300 (18%)
Query: 364 VYRGKIGGDFVAIKKVYGDASD----QIKLLNKIN-HSSLIRLLGICFNGGNWYLVYE-- 416
V++G G VA+K++ D D +IKLL + + H ++IR Y+ E
Sbjct: 50 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 109
Query: 417 --NAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
N + S ++D+ K I + +A+G+ +LHS +H+D+K N+L+
Sbjct: 110 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI---IHRDLKPQNILV 166
Query: 475 DT-------------DFRAKIANFALARPAERQEGEFALT-SHIVGTKGYMAPEYLENGL 520
T + R I++F L + + + F ++ GT G+ APE LE
Sbjct: 167 STSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEEST 226
Query: 521 ---VSTKLDVYAFGVLMLEMLSGKEAP--ALYSEENMLLVDVLNPVLHKEDGEESLRHLM 575
++ +D+++ G + +LS + P YS E+ ++ + + + ++ L
Sbjct: 227 KRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL--------DEMKCLH 278
Query: 576 DPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWELSKNISEL 635
D S+ LI + DP RP K+ L L W SK + L
Sbjct: 279 DRSLIAE--------ATDLISQMIDHDPLKRPTAMKV-------LRHPLFWPKSKKLEFL 323
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 439 QRIQIAL-DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE 497
+QI + ++ L +LH +++DIK N+LLD++ + +F L++ E E
Sbjct: 159 HEVQIYVGEIVLALEHLHKLGI---IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 498 FALTSHIVGTKGYMAPEYLENGLV--STKLDVYAFGVLMLEMLSGKEAPALYSEENMLLV 555
A GT YMAP+ + G +D ++ GVLM E+L+G + E+N
Sbjct: 216 RAYD--FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN---- 269
Query: 556 DVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
E S R L + YP + L LI+ L KDP R
Sbjct: 270 ---------SQAEISRRIL---KSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 362 GSVYRGKIGGDFVAIKKV-YGDASDQIKLLNKINHSSL-----IRLLGICFNGGNWYLVY 415
+ R K+ + VA+K + G A D+ INH SL +R + + ++
Sbjct: 36 ARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD 475
E A G L I + G+F + R + +G++Y HS H+D+K N LLD
Sbjct: 96 EYASGGELYERICN-AGRFSEDEARFFFQ-QLLSGVSYCHSMQI---CHRDLKLENTLLD 150
Query: 476 TD--FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKL-DVYAFGV 532
R KI +F ++ + + VGT Y+APE L K+ DV++ GV
Sbjct: 151 GSPAPRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGV 206
Query: 533 LMLEMLSG 540
+ ML G
Sbjct: 207 TLYVMLVG 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT Y+AP + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK--GGKFLDWAQRIQI 443
+I++L K+NH +I++ F+ ++Y+V E G L DK G K L A
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF----DKVVGNKRLKEATCKLY 244
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEGEFAL 500
+ + YLH +H+D+K NVLL + D KI +F ++ GE +L
Sbjct: 245 FYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSL 297
Query: 501 TSHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+APE L + + +D ++ GV++ LSG
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK--GGKFLDWAQRIQI 443
+I++L K+NH +I++ F+ ++Y+V E G L DK G K L A
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF----DKVVGNKRLKEATCKLY 258
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEGEFAL 500
+ + YLH +H+D+K NVLL + D KI +F ++ GE +L
Sbjct: 259 FYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSL 311
Query: 501 TSHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLMLEMLSG 540
+ GT Y+APE L + + +D ++ GV++ LSG
Sbjct: 312 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 127/304 (41%), Gaps = 58/304 (19%)
Query: 364 VYRGKIGGDFVAIKKVYGDASD----QIKLLNKIN-HSSLIRLLGICFNGGNWYLVYE-- 416
V++G G VA+K++ D D +IKLL + + H ++IR Y+ E
Sbjct: 32 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91
Query: 417 --NAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
N + S ++D+ K I + +A+G+ +LHS +H+D+K N+L+
Sbjct: 92 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI---IHRDLKPQNILV 148
Query: 475 DT-------------DFRAKIANFALARPAERQEGEFALT-SHIVGTKGYMAPEYLE--N 518
T + R I++F L + + + F ++ GT G+ APE LE N
Sbjct: 149 STSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESN 208
Query: 519 GLVSTK-----LDVYAFGVLMLEMLSGKEAP--ALYSEENMLLVDVLNPVLHKEDGEESL 571
L + + +D+++ G + +LS + P YS E+ ++ + + + +
Sbjct: 209 NLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL--------DEM 260
Query: 572 RHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWELSKN 631
+ L D S+ LI + DP RP K+ L L W SK
Sbjct: 261 KCLHDRSLIAE--------ATDLISQMIDHDPLKRPTAMKV-------LRHPLFWPKSKK 305
Query: 632 ISEL 635
+ L
Sbjct: 306 LEFL 309
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH 503
A ++ GL ++H N V++D+K +N+LLD +I++ LA +++ +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 504 IVGTKGYMAPEYLENGLV-STKLDVYAFGVLMLEMLSG 540
VGT GYMAPE L+ G+ + D ++ G ++ ++L G
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH 503
A ++ GL ++H N V++D+K +N+LLD +I++ LA +++ +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 504 IVGTKGYMAPEYLENGLV-STKLDVYAFGVLMLEMLSG 540
VGT GYMAPE L+ G+ + D ++ G ++ ++L G
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH 503
A ++ GL ++H N V++D+K +N+LLD +I++ LA +++ +
Sbjct: 297 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 349
Query: 504 IVGTKGYMAPEYLENGLV-STKLDVYAFGVLMLEMLSG 540
VGT GYMAPE L+ G+ + D ++ G ++ ++L G
Sbjct: 350 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 26/166 (15%)
Query: 386 QIKLLNKINHSSLIRLLGIC--------FNGGNWYLVYENAVNGSLSVWINDKGGKFLDW 437
+++LL + H ++I LL + FN + YLV + + L+ + K K D
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFN--DVYLV-THLMGADLNNIV--KSQKLTD- 124
Query: 438 AQRIQIAL-DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+Q + + GL Y+HS +H+D+K SN+ ++ D KI +F L R + +
Sbjct: 125 -DHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT 180
Query: 497 EFALTSHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
+ V T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 181 GY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH 503
A ++ GL ++H N V++D+K +N+LLD +I++ LA +++ +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 504 IVGTKGYMAPEYLENGLV-STKLDVYAFGVLMLEMLSG 540
VGT GYMAPE L+ G+ + D ++ G ++ ++L G
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+I +L +H ++++LL + N +++ E G++ + + + L +Q +
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA-VMLELERPLTESQIQVVCK 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
LNYLH + +H+D+K N+L D K+A+F ++ A+ +
Sbjct: 116 QTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRTXIQRRDSFI 170
Query: 506 GTKGYMAPEYL-----ENGLVSTKLDVYAFGVLMLEM 537
GT +MAPE + ++ K DV++ G+ ++EM
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 337 QSLKVYTFEELQAATDDFNPS-CW-IKGSVYRGKIGGDF---------VAIKKVYGDASD 385
QS+K Y + T D NP W I G + G G + +A KV S+
Sbjct: 21 QSMKQY-----EHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE 75
Query: 386 Q--------IKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDW 437
+ I +L +H ++++LL + N +++ E G++ + + + L
Sbjct: 76 EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA-VMLELERPLTE 134
Query: 438 AQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE 497
+Q + LNYLH + +H+D+K N+L D K+A+F ++ R
Sbjct: 135 SQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX--- 188
Query: 498 FALTSHIVGTKGYMAPEYL-----ENGLVSTKLDVYAFGVLMLEM 537
+GT +MAPE + ++ K DV++ G+ ++EM
Sbjct: 189 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA---KIANFALARPAERQEGEFALTS 502
D+++ L YLH +H+D+K N++L + KI + A+ E +GE L +
Sbjct: 130 DISSALRYLHENRI---IHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGE--LCT 182
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
VGT Y+APE LE + +D ++FG L E ++G
Sbjct: 183 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA---KIANFALARPAERQEGEFALTS 502
D+++ L YLH +H+D+K N++L + KI + A+ E +GE L +
Sbjct: 129 DISSALRYLHENRI---IHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGE--LCT 181
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
VGT Y+APE LE + +D ++FG L E ++G
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH N +H+D+K N+ L+ D KI +F LA E +GE + GT
Sbjct: 138 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGE--RKKDLCGTPN 191
Query: 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L S ++D+++ G ++ +L GK
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---- 489
FL I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 187 FLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYK 243
Query: 490 -PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 244 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--- 294
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ +D EE R L + + P T + + + C +PS RP
Sbjct: 295 --PGVKID-----------EEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 340
Query: 609 MDKIAQSISRFLNAS 623
++ + + L A+
Sbjct: 341 FSELVEHLGNLLQAN 355
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 44/229 (19%)
Query: 337 QSLKVYTFEELQAATDDFNPS-CW-IKGSVYRGKIGGDF---------VAIKKVYGDASD 385
QS+K Y + T D NP W I G + G G + +A KV S+
Sbjct: 21 QSMKQY-----EHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE 75
Query: 386 Q--------IKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDW 437
+ I +L +H ++++LL + N +++ E G++ + + + L
Sbjct: 76 EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA-VMLELERPLTE 134
Query: 438 AQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA----RPAER 493
+Q + LNYLH + +H+D+K N+L D K+A+F ++ R +R
Sbjct: 135 SQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR 191
Query: 494 QEGEFALTSHIVGTKGYMAPEYL-----ENGLVSTKLDVYAFGVLMLEM 537
++ +GT +MAPE + ++ K DV++ G+ ++EM
Sbjct: 192 RDS-------FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---- 489
FL I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 189 FLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYK 245
Query: 490 -PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 246 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--- 296
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ +D EE R L + + P T + + + C +PS RP
Sbjct: 297 --PGVKID-----------EEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 342
Query: 609 MDKIAQSISRFLNAS 623
++ + + L A+
Sbjct: 343 FSELVEHLGNLLQAN 357
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 337 QSLKVYTFEELQAATDDFNPS-CW-IKGSVYRGKIGGDF---------VAIKKVYGDASD 385
QS+K Y + T D NP W I G + G G + +A KV S+
Sbjct: 21 QSMKQY-----EHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE 75
Query: 386 Q--------IKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDW 437
+ I +L +H ++++LL + N +++ E G++ + + + L
Sbjct: 76 EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA-VMLELERPLTE 134
Query: 438 AQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE 497
+Q + LNYLH + +H+D+K N+L D K+A+F ++ R
Sbjct: 135 SQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX--- 188
Query: 498 FALTSHIVGTKGYMAPEYL-----ENGLVSTKLDVYAFGVLMLEM 537
+GT +MAPE + ++ K DV++ G+ ++EM
Sbjct: 189 IQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 127/304 (41%), Gaps = 58/304 (19%)
Query: 364 VYRGKIGGDFVAIKKVYGDASD----QIKLLNKIN-HSSLIRLLGICFNGGNWYLVYE-- 416
V++G G VA+K++ D D +IKLL + + H ++IR Y+ E
Sbjct: 32 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91
Query: 417 --NAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474
N + S ++D+ K I + +A+G+ +LHS +H+D+K N+L+
Sbjct: 92 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI---IHRDLKPQNILV 148
Query: 475 DT-------------DFRAKIANFALARPAERQEGEFALT-SHIVGTKGYMAPEYLE--N 518
T + R I++F L + + + F ++ GT G+ APE LE N
Sbjct: 149 STSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESN 208
Query: 519 GLVSTK-----LDVYAFGVLMLEMLSGKEAP--ALYSEENMLLVDVLNPVLHKEDGEESL 571
L + + +D+++ G + +LS + P YS E+ ++ + + + +
Sbjct: 209 NLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL--------DEM 260
Query: 572 RHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWELSKN 631
+ L D S+ LI + DP RP K+ L L W SK
Sbjct: 261 KCLHDRSLIAE--------ATDLISQMIDHDPLKRPTAMKV-------LRHPLFWPKSKK 305
Query: 632 ISEL 635
+ L
Sbjct: 306 LEFL 309
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 100/239 (41%), Gaps = 26/239 (10%)
Query: 389 LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVA 448
+++K++H L+ G+C G LV E GSL ++ K ++ ++++A +A
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLA 123
Query: 449 TGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508
+++L T +H ++ N+LL + K N + ++ L I+ +
Sbjct: 124 AAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER 180
Query: 509 -GYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED 566
++ PE +EN ++ D ++FG + E+ SG + P L D
Sbjct: 181 IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP-----------------LSALD 223
Query: 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLA 625
+ L+ D + P A + LI +C+ +P RP+ I + ++ L
Sbjct: 224 SQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 38/202 (18%)
Query: 371 GDFVAIKKVYG---DASD------QIKLLNKIN-HSSLIRLLGICF--NGGNWYLVYENA 418
G+ VA+KK++ +++D +I +L +++ H +++ LL + N + YLV++
Sbjct: 34 GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFD-Y 92
Query: 419 VNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF 478
+ L I L+ + + + + YLHS +H+D+K SN+LL+ +
Sbjct: 93 METDLHAVIR---ANILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAEC 146
Query: 479 RAKIANFALARP------------------AERQEGEFALTSHIVGTKGYMAPEYLENGL 520
K+A+F L+R E + + + + V T+ Y APE L
Sbjct: 147 HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGST 206
Query: 521 VSTK-LDVYAFGVLMLEMLSGK 541
TK +D+++ G ++ E+L GK
Sbjct: 207 KYTKGIDMWSLGCILGEILCGK 228
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH N +H+D+K N+ L+ D KI +F LA E +GE + GT
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGE--RKKDLCGTPN 207
Query: 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L S ++D+++ G ++ +L GK
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ + H +++RL G YLV++ G L I + ++ A
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIH 137
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA---KIANFALARPAE-RQEGEFALT 501
+ +N++H VH+D+K N+LL + + K+A+F LA + Q+ F
Sbjct: 138 QILESVNHIHQHDI---VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA 194
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
GT GY++PE L +D++A GV++ +L G P + E+ L
Sbjct: 195 ----GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG--YPPFWDEDQHKL 241
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 381 GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQR 440
G + +I +L+++ H+++I++L I N G + LV E +G D+ + LD
Sbjct: 74 GKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLA 132
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
I + + + YL +H+DIK N+++ DF K+ +F A ER G+
Sbjct: 133 SYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER--GKLFY 187
Query: 501 TSHIVGTKGYMAPEYLE-NGLVSTKLDVYAFGVLMLEML--------------SGKEAPA 545
T GT Y APE L N +L++++ GV + ++ + P
Sbjct: 188 T--FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPY 245
Query: 546 LYSEENMLLVD-VLNPVLHKEDGEESLRHLMDP 577
L S+E M LV +L PV + E L + DP
Sbjct: 246 LVSKELMSLVSGLLQPVPERRTTLEKL--VTDP 276
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---- 489
FL I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 194 FLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYK 250
Query: 490 -PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 251 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--- 301
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ +D EE R L + + P T + + + C +PS RP
Sbjct: 302 --PGVKID-----------EEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 347
Query: 609 MDKIAQSISRFLNAS 623
++ + + L A+
Sbjct: 348 FSELVEHLGNLLQAN 362
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 42/236 (17%)
Query: 366 RGKIGGDFVAIKKVYGDASD----------QIKLLNKINHSSLIRLLGI---CFNGGNWY 412
R ++ G VAIKK+ +A D ++K+L H ++I + I G +
Sbjct: 75 RRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 133
Query: 413 LVYE--NAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
VY + + L I+ L+ + L GL Y+HS +H+D+K S
Sbjct: 134 SVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL--LRGLKYMHSAQV---IHRDLKPS 188
Query: 471 NVLLDTDFRAKIANFALAR-----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTK- 524
N+L++ + KI +F +AR PAE Q + +T + V T+ Y APE + + T+
Sbjct: 189 NLLVNENCELKIGDFGMARGLCTSPAEHQ---YFMTEY-VATRWYRAPELMLSLHEYTQA 244
Query: 525 LDVYAFGVLMLEMLSGKEAPALYSEEN--------MLLVDVLNPVLHKEDGEESLR 572
+D+++ G + EML+ ++ L+ +N M+++ +P + + G E +R
Sbjct: 245 IDLWSVGCIFGEMLARRQ---LFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVR 297
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509
G+ YLH N +H+D+K N+ L+ D KI +F LA E +GE + GT
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGE--RKKXLCGTPN 207
Query: 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
Y+APE L S ++D+++ G ++ +L GK
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR---- 489
FL I + VA G+ +L S +H+D+ N+LL KI +F LAR
Sbjct: 196 FLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYK 252
Query: 490 -PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ S +P
Sbjct: 253 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--- 303
Query: 549 EENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
+ +D EE R L + + P T + + + C +PS RP
Sbjct: 304 --PGVKID-----------EEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 349
Query: 609 MDKIAQSISRFLNAS 623
++ + + L A+
Sbjct: 350 FSELVEHLGNLLQAN 364
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 27/195 (13%)
Query: 362 GSVYRGK--IGGDFVAIKKVYGDASD--------QIKLLNKINHSSLIRLLGICFNGGNW 411
+VY+GK + + VA+K++ + + ++ LL + H++++ L I +
Sbjct: 16 ATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSL 75
Query: 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSN 471
LV+E ++ L +++D G ++ + GL Y H +H+D+K N
Sbjct: 76 TLVFE-YLDKDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQN 130
Query: 472 VLLDTDFRAKIANFALAR----PAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLD 526
+L++ K+A+F LAR P + + E V T Y P+ L ST++D
Sbjct: 131 LLINERGELKLADFGLARAKSIPTKTYDNE-------VVTLWYRPPDILLGSTDYSTQID 183
Query: 527 VYAFGVLMLEMLSGK 541
++ G + EM +G+
Sbjct: 184 MWGVGCIFYEMATGR 198
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
D++ +L +++H ++++L + N+YLV E G L I + KF + + I
Sbjct: 53 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-QKFSEVDAAV-IM 110
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR---AKIANFALARPAERQEGEFALT 501
V +G YLH VH+D+K N+LL++ R KI +F L+ E
Sbjct: 111 KQVLSGTTYLHKHNI---VHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG----GKM 163
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+GT Y+APE L K DV++ GV++ +L G
Sbjct: 164 KERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCG 201
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +L I + LD
Sbjct: 72 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LD 126
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A G
Sbjct: 127 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA----G 179
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ V T+ Y APE + +D+++ G +M EM+ G
Sbjct: 180 TSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +L I + LD
Sbjct: 75 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LD 129
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 130 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 183
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 184 SFMMTPYVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 19/197 (9%)
Query: 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA 444
++ ++L +N L++L + N Y+V E G + + + G+F + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAA 148
Query: 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504
V T YLHS +++D+K N+L+D ++ +F A+ R +G T +
Sbjct: 149 QIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGR---TWXL 198
Query: 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD------VL 558
GT +APE + + + +D +A GVL+ EM +G P ++++ + + + V
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVR 256
Query: 559 NPVLHKEDGEESLRHLM 575
P D ++ LR+L+
Sbjct: 257 FPSHFSSDLKDLLRNLL 273
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 413 LVYENAVNGSLSVWIND----KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIK 468
LV E +G+L ++ K W ++I GL +LH+ T PP +H+D+K
Sbjct: 106 LVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHTRT-PPIIHRDLK 158
Query: 469 CSNVLLDTDF-RAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDV 527
C N+ + KI + LA + FA ++GT + APE E + +DV
Sbjct: 159 CDNIFITGPTGSVKIGDLGLATL---KRASFA--KAVIGTPEFXAPEXYEEKYDES-VDV 212
Query: 528 YAFGVLMLEMLSGKEAPALYSE 549
YAFG LE + E P YSE
Sbjct: 213 YAFGXCXLEXATS-EYP--YSE 231
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 42/236 (17%)
Query: 366 RGKIGGDFVAIKKVYGDASD----------QIKLLNKINHSSLIRLLGI---CFNGGNWY 412
R ++ G VAIKK+ +A D ++K+L H ++I + I G +
Sbjct: 74 RRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132
Query: 413 LVYE--NAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
VY + + L I+ L+ + L GL Y+HS +H+D+K S
Sbjct: 133 SVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL--LRGLKYMHSAQV---IHRDLKPS 187
Query: 471 NVLLDTDFRAKIANFALAR-----PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTK- 524
N+L++ + KI +F +AR PAE Q + +T + V T+ Y APE + + T+
Sbjct: 188 NLLVNENCELKIGDFGMARGLCTSPAEHQ---YFMTEY-VATRWYRAPELMLSLHEYTQA 243
Query: 525 LDVYAFGVLMLEMLSGKEAPALYSEEN--------MLLVDVLNPVLHKEDGEESLR 572
+D+++ G + EML+ ++ L+ +N M+++ +P + + G E +R
Sbjct: 244 IDLWSVGCIFGEMLARRQ---LFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVR 296
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +L I + LD
Sbjct: 64 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LD 118
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 172
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
F +T ++V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 173 SFMMTPYVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 14/172 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ K+ H +++RL YLV++ G L I + +F A
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ 112
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA---KIANFALARPAERQEGEFALTS 502
+ + Y HS VH+++K N+LL + + K+A+F LA E
Sbjct: 113 QILESIAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA- 168
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
GT GY++PE L+ S +D++A GV++ +L G P + E+ L
Sbjct: 169 ---GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG--YPPFWDEDQHRL 215
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 14/172 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ K+ H +++RL YLV++ G L I + +F A
Sbjct: 54 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ 111
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA---KIANFALARPAERQEGEFALTS 502
+ + Y HS VH+++K N+LL + + K+A+F LA E
Sbjct: 112 QILESIAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA- 167
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
GT GY++PE L+ S +D++A GV++ +L G P + E+ L
Sbjct: 168 ---GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG--YPPFWDEDQHRL 214
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 116
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 117 EFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 172
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 173 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 228
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 229 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 262
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 14/172 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ K+ H +++RL YLV++ G L I + +F A
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ 112
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA---KIANFALARPAERQEGEFALTS 502
+ + Y HS VH+++K N+LL + + K+A+F LA E
Sbjct: 113 QILESIAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA- 168
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
GT GY++PE L+ S +D++A GV++ +L G P + E+ L
Sbjct: 169 ---GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG--YPPFWDEDQHRL 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 116
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 117 EFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 172
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 173 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 228
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 229 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 262
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 385 DQIKLLNKINHSS--LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
++I LNK+ S +IRL Y+V E N L+ W+ K K +D +R
Sbjct: 75 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKK--KSIDPWERKS 131
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
++ ++ +H VH D+K +N L+ D K+ +F +A + S
Sbjct: 132 YWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDS 187
Query: 503 HIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLMLEMLSGKEAPALYSEEN 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 188 Q-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------- 238
Query: 552 MLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++N + L ++DP+ + +P + + +++ CLK+DP R
Sbjct: 239 --FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 284
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 362 GSVYRGKIGGDFVAIKKV-YGDASDQIKLLNKINHSSL-----IRLLGICFNGGNWYLVY 415
+ R K + VA+K + G+ D+ INH SL +R + + +V
Sbjct: 35 ARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVM 94
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD 475
E A G L I + G+F + R + +G++Y H+ H+D+K N LLD
Sbjct: 95 EYASGGELFERICN-AGRFSEDEARF-FFQQLISGVSYAHAMQV---AHRDLKLENTLLD 149
Query: 476 TD--FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKL-DVYAFGV 532
R KIA+F ++ + + VGT Y+APE L K+ DV++ GV
Sbjct: 150 GSPAPRLKIADFGYSKASVLH----SQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 533 LMLEMLSG 540
+ ML G
Sbjct: 206 TLYVMLVG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 362 GSVYRGK--IGGDFVAIKKVYGDASDQ---------IKLLNKINHSSLIRLLGICFNGGN 410
G+V++ K + VA+K+V D D+ I LL ++ H +++RL + +
Sbjct: 16 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
LV+E + L + + G LD + GL + HS +H+D+K
Sbjct: 76 LTLVFE-FCDQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSRNV---LHRDLKPQ 130
Query: 471 NVLLDTDFRAKIANFALAR----PAERQEGEFALTSHIVGTKGYMAPEYLENG-LVSTKL 525
N+L++ + K+ANF LAR P E V T Y P+ L L ST +
Sbjct: 131 NLLINRNGELKLANFGLARAFGIPVRCYSAE-------VVTLWYRPPDVLFGAKLYSTSI 183
Query: 526 DVYAFGVLMLEM 537
D+++ G + E+
Sbjct: 184 DMWSAGCIFAEL 195
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 385 DQIKLLNKINHSS--LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
++I LNK+ S +IRL Y+V E N L+ W+ K K +D +R
Sbjct: 103 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKK--KSIDPWERKS 159
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
++ ++ +H VH D+K +N L+ D K+ +F +A + S
Sbjct: 160 YWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 503 HIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLMLEMLSGKEAPALYSEEN 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 216 Q-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------- 266
Query: 552 MLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++N + L ++DP+ + +P + + +++ CLK+DP R
Sbjct: 267 --FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 385 DQIKLLNKINHSS--LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
++I LNK+ S +IRL Y+V E N L+ W+ K K +D +R
Sbjct: 56 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKK--KSIDPWERKS 112
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
++ ++ +H VH D+K +N L+ D K+ +F +A + S
Sbjct: 113 YWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDS 168
Query: 503 HIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLMLEMLSGKEAPALYSEEN 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 169 Q-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------- 219
Query: 552 MLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++N + L ++DP+ + +P + + +++ CLK+DP R
Sbjct: 220 --FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 265
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 35/250 (14%)
Query: 369 IGGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428
I +A + G +I L + H +I+L + + +V E A N L +I
Sbjct: 37 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV 95
Query: 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
+ A+R + + + Y H VH+D+K N+LLD KIA+F L+
Sbjct: 96 QRDKMSEQEARRF--FQQIISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFGLS 150
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSGKEAPALY 547
+G F TS G+ Y APE + L + ++DV++ GV++ ML + P +
Sbjct: 151 NIM--TDGNFLKTS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC-RRLP--F 203
Query: 548 SEENMLLVDVLNPVLHKE--DGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSG 605
+E++ PVL K +G +L + P G LI+ L +P
Sbjct: 204 DDESI-------PVLFKNISNGVYTLPKFLSPGAAG------------LIKRMLIVNPLN 244
Query: 606 RPAMDKIAQS 615
R ++ +I Q
Sbjct: 245 RISIHEIMQD 254
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 14/172 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ K+ H +++RL YLV++ G L I + +F A
Sbjct: 78 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ 135
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA---KIANFALARPAERQEGEFALTS 502
+ + Y HS VH+++K N+LL + + K+A+F LA E
Sbjct: 136 QILESIAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF-- 190
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
GT GY++PE L+ S +D++A GV++ +L G P + E+ L
Sbjct: 191 --AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG--YPPFWDEDQHRL 238
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 385 DQIKLLNKINHSS--LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
++I LNK+ S +IRL Y+V E N L+ W+ K K +D +R
Sbjct: 103 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKK--KSIDPWERKS 159
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
++ L +H+ VH D+K +N L+ D K+ +F +A + S
Sbjct: 160 YWKNM---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 503 HIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLMLEMLSGKEAPALYSEEN 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 216 Q-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------- 266
Query: 552 MLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++N + L ++DP+ + +P + + +++ CLK+DP R
Sbjct: 267 --FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 385 DQIKLLNKINHSS--LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
++I LNK+ S +IRL Y+V E N L+ W+ K K +D +R
Sbjct: 75 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKK--KSIDPWERKS 131
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
++ ++ +H VH D+K +N L+ D K+ +F +A + S
Sbjct: 132 YWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDS 187
Query: 503 HIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLMLEMLSGKEAPALYSEEN 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 188 Q-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------- 238
Query: 552 MLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++N + L ++DP+ + +P + + +++ CLK+DP R
Sbjct: 239 --FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 284
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 385 DQIKLLNKINHSS--LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
++I LNK+ S +IRL Y+V E N L+ W+ K K +D +R
Sbjct: 59 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKK--KSIDPWERKS 115
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
++ ++ +H VH D+K +N L+ D K+ +F +A + S
Sbjct: 116 YWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDS 171
Query: 503 HIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLMLEMLSGKEAPALYSEEN 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 172 Q-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------- 222
Query: 552 MLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++N + L ++DP+ + +P + + +++ CLK+DP R
Sbjct: 223 --FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 268
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI + LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI + LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 35/250 (14%)
Query: 369 IGGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428
I +A + G +I L + H +I+L + + +V E A N L +I
Sbjct: 41 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV 99
Query: 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
+ A+R + + + Y H VH+D+K N+LLD KIA+F L+
Sbjct: 100 QRDKMSEQEARRF--FQQIISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFGLS 154
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSGKEAPALY 547
+G F TS G+ Y APE + L + ++DV++ GV++ ML + P +
Sbjct: 155 NIM--TDGNFLKTS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC-RRLP--F 207
Query: 548 SEENMLLVDVLNPVLHK--EDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSG 605
+E++ PVL K +G +L + P G LI+ L +P
Sbjct: 208 DDESI-------PVLFKNISNGVYTLPKFLSPGAAG------------LIKRMLIVNPLN 248
Query: 606 RPAMDKIAQS 615
R ++ +I Q
Sbjct: 249 RISIHEIMQD 258
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 45/209 (21%)
Query: 366 RGKIGGDFVAIKKVYGDASD------QIKLLNKINHSSLIRLLGICFNGGNW-------- 411
R + + AIKK+ ++ LL +NH ++R N+
Sbjct: 26 RNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85
Query: 412 -----YLVYENAVNGSL-----SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPP 461
++ E NG+L S +N + ++ W ++ + L+Y+HS
Sbjct: 86 KKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY--W----RLFRQILEALSYIHS---QG 136
Query: 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH-----------IVGTKGY 510
+H+D+K N+ +D KI +F LA+ R L S +GT Y
Sbjct: 137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196
Query: 511 MAPEYLE-NGLVSTKLDVYAFGVLMLEML 538
+A E L+ G + K+D+Y+ G++ EM+
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++ +L +I H ++I L I N + L+ E G L ++ +K D A Q
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA--TQFLK 122
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGEFALT 501
+ G++YLHS H D+K N+ LLD + R K+ +F +A E EF
Sbjct: 123 QILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG-NEF--- 175
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+I GT ++APE + + + D+++ GV+ +LSG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
+ ++I ++N+++H++LI+L + + LV E G L I D+ + I
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTE-LDTI 190
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNVL-LDTDFRA-KIANFALAR---PAERQEG 496
+ G+ ++H +H D+K N+L ++ D + KI +F LAR P E+ +
Sbjct: 191 LFMKQICEGIRHMHQMYI---LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
F GT ++APE + VS D+++ GV+ +LSG
Sbjct: 248 NF-------GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 385 DQIKLLNKINHSS--LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
++I LNK+ S +IRL Y+V E N L+ W+ K K +D +R
Sbjct: 55 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKK--KSIDPWERKS 111
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
++ ++ +H VH D+K +N L+ D K+ +F +A + S
Sbjct: 112 YWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDS 167
Query: 503 HIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLMLEMLSGKEAPALYSEEN 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 168 Q-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------- 218
Query: 552 MLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++N + L ++DP+ + +P + + +++ CLK+DP R
Sbjct: 219 --FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 264
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++ +L +I H ++I L I N + L+ E G L ++ +K D A Q
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA--TQFLK 115
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGEFALT 501
+ G++YLHS H D+K N+ LLD + R K+ +F +A E EF
Sbjct: 116 QILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-AGNEF--- 168
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+I GT ++APE + + + D+++ GV+ +LSG
Sbjct: 169 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 35/250 (14%)
Query: 369 IGGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428
I +A + G +I L + H +I+L + + +V E A N L +I
Sbjct: 46 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV 104
Query: 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
+ A+R + + + Y H VH+D+K N+LLD KIA+F L+
Sbjct: 105 QRDKMSEQEARRF--FQQIISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFGLS 159
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSGKEAPALY 547
+G F TS G+ Y APE + L + ++DV++ GV++ ML + P +
Sbjct: 160 NIM--TDGNFLKTS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC-RRLP--F 212
Query: 548 SEENMLLVDVLNPVLHKE--DGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSG 605
+E++ PVL K +G +L + P G LI+ L +P
Sbjct: 213 DDESI-------PVLFKNISNGVYTLPKFLSPGAAG------------LIKRMLIVNPLN 253
Query: 606 RPAMDKIAQS 615
R ++ +I Q
Sbjct: 254 RISIHEIMQD 263
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 35/250 (14%)
Query: 369 IGGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428
I +A + G +I L + H +I+L + + +V E A N L +I
Sbjct: 47 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV 105
Query: 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488
+ A+R + + + Y H VH+D+K N+LLD KIA+F L+
Sbjct: 106 QRDKMSEQEARRF--FQQIISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFGLS 160
Query: 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLMLEMLSGKEAPALY 547
+G F TS G+ Y APE + L + ++DV++ GV++ ML + P +
Sbjct: 161 NIM--TDGNFLKTS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC-RRLP--F 213
Query: 548 SEENMLLVDVLNPVLHK--EDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSG 605
+E++ PVL K +G +L + P G LI+ L +P
Sbjct: 214 DDESI-------PVLFKNISNGVYTLPKFLSPGAAG------------LIKRMLIVNPLN 254
Query: 606 RPAMDKIAQS 615
R ++ +I Q
Sbjct: 255 RISIHEIMQD 264
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICF 406
G VY+G + G VAIK + A ++ L ++ H +++ LLG+
Sbjct: 40 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99
Query: 407 NGGNWYLVYENAVNGSLSVWI-------------NDKGGK-FLDWAQRIQIALDVATGLN 452
+++ +G L ++ +D+ K L+ + + +A G+
Sbjct: 100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 159
Query: 453 YLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512
YL S VHKD+ NVL+ KI++ L R + L + ++ + +MA
Sbjct: 160 YLSSHHV---VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR-WMA 215
Query: 513 PEYLENGLVSTKLDVYAFGVLMLEMLS 539
PE + G S D++++GV++ E+ S
Sbjct: 216 PEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ + H +++RL G+ YL+++ G L I + ++ A
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQ 128
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA---KIANFALARPAE-RQEGEFALT 501
+ + + H VH+D+K N+LL + + K+A+F LA E Q+ F
Sbjct: 129 QILEAVLHCHQMGV---VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA 185
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
GT GY++PE L +D++A GV++ +L G P + E+ L
Sbjct: 186 ----GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG--YPPFWDEDQHRL 232
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++ +L +I H ++I L I N + L+ E G L ++ +K D A Q
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA--TQFLK 136
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGEFALT 501
+ G++YLHS H D+K N+ LLD + R K+ +F +A E EF
Sbjct: 137 QILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-AGNEF--- 189
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+I GT ++APE + + + D+++ GV+ +LSG
Sbjct: 190 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506
+ GL Y+HS +H+D+K SN+ ++ D KI + LAR + + + V
Sbjct: 134 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY------VA 184
Query: 507 TKGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGK 541
T+ Y APE + N + + +D+++ G +M E+L+G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D ++ +L +I H ++I L + N + L+ E G L ++ +K L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEAT 117
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEGE 497
+ + G+ YLHS H D+K N+ LLD + R KI +F LA + E
Sbjct: 118 EFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
F +I GT ++APE + + + D+++ GV+ +LSG +P L + L +V
Sbjct: 174 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANV 229
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++ + Y T+ L I L KDP R
Sbjct: 230 ---------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 362 GSVYRGKIGG-------DFVAIKKVYGDASDQIK--------LLNKINHSSLIRLLGICF 406
G VY+G + G VAIK + A ++ L ++ H +++ LLG+
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 82
Query: 407 NGGNWYLVYENAVNGSLSVWI-------------NDKGGK-FLDWAQRIQIALDVATGLN 452
+++ +G L ++ +D+ K L+ + + +A G+
Sbjct: 83 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 142
Query: 453 YLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512
YL S VHKD+ NVL+ KI++ L R + L + ++ + +MA
Sbjct: 143 YLSSHHV---VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR-WMA 198
Query: 513 PEYLENGLVSTKLDVYAFGVLMLEMLS 539
PE + G S D++++GV++ E+ S
Sbjct: 199 PEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500
++ +D+A G+ YL S +H+D+ N +L D +A+F L+R +
Sbjct: 140 VRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG 196
Query: 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP 560
+ + K ++A E L + L + DV+AFGV M E+++ + P E ++ N
Sbjct: 197 CASKLPVK-WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN----AEIYNY 251
Query: 561 VLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608
++ G L+ PP V L+ C DP RP+
Sbjct: 252 LI----GGNRLKQ----------PPECMEEVYDLMYQCWSADPKQRPS 285
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 35/193 (18%)
Query: 374 VAIKKVYGDASD------------------QIKLLNKINHSSLIRLLGICFN-----GGN 410
VAIK+V+ SD +I+LLN +H +++ L I +
Sbjct: 49 VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHK 108
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL-DVATGLNYLHSFTNPPHVHKDIKC 469
YLV E + L+ I+D+ + + Q IQ + + GL+ LH VH+D+
Sbjct: 109 LYLVTE-LMRTDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEAGV---VHRDLHP 162
Query: 470 SNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKL-DVY 528
N+LL + I +F LA R++ A +H V + Y APE + TKL D++
Sbjct: 163 GNILLADNNDITICDFNLA----REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMW 218
Query: 529 AFGVLMLEMLSGK 541
+ G +M EM + K
Sbjct: 219 SAGCVMAEMFNRK 231
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 375 AIKKVYGDASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK 433
I K D S++I++L + H ++I L + +G + YLV E G L I + K
Sbjct: 59 VIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ--K 116
Query: 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL-LDTDFRA---KIANFALAR 489
F + + + + YLHS VH+D+K SN+L +D +I +F A+
Sbjct: 117 FFSEREASFVLHTIGKTVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Query: 490 PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ G + T ++APE L+ D+++ G+L+ ML+G
Sbjct: 174 QLRAENGLLMTPCY---TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 447 VATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH--- 503
+ L+Y+HS +H+D+K N+ +D KI +F LA+ R L S
Sbjct: 125 ILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 504 --------IVGTKGYMAPEYLE-NGLVSTKLDVYAFGVLMLEML 538
+GT Y+A E L+ G + K+D+Y+ G++ EM+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 362 GSVYRGK--IGGDFVAIKKVYGDASDQ---------IKLLNKINHSSLIRLLGICFNGGN 410
G+V++ K + VA+K+V D D+ I LL ++ H +++RL + +
Sbjct: 16 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCS 470
LV+E + L + + G LD + GL + HS +H+D+K
Sbjct: 76 LTLVFE-FCDQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSRNV---LHRDLKPQ 130
Query: 471 NVLLDTDFRAKIANFALAR----PAERQEGEFALTSHIVGTKGYMAPEYLENG-LVSTKL 525
N+L++ + K+A+F LAR P E V T Y P+ L L ST +
Sbjct: 131 NLLINRNGELKLADFGLARAFGIPVRCYSAE-------VVTLWYRPPDVLFGAKLYSTSI 183
Query: 526 DVYAFGVLMLEM 537
D+++ G + E+
Sbjct: 184 DMWSAGCIFAEL 195
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQE-GEFALTS-HIVG 506
GL YLH+ +H D+K NVLL +D RA + +F A + G+ LT +I G
Sbjct: 162 GLEYLHTRRI---LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
T+ +MAPE + K+D+++ +ML ML+G
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 35/193 (18%)
Query: 374 VAIKKVYGDASD------------------QIKLLNKINHSSLIRLLGICFN-----GGN 410
VAIK+V+ SD +I+LLN +H +++ L I +
Sbjct: 49 VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHK 108
Query: 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL-DVATGLNYLHSFTNPPHVHKDIKC 469
YLV E + L+ I+D+ + + Q IQ + + GL+ LH VH+D+
Sbjct: 109 LYLVTE-LMRTDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEAGV---VHRDLHP 162
Query: 470 SNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKL-DVY 528
N+LL + I +F LA R++ A +H V + Y APE + TKL D++
Sbjct: 163 GNILLADNNDITICDFNLA----REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMW 218
Query: 529 AFGVLMLEMLSGK 541
+ G +M EM + K
Sbjct: 219 SAGCVMAEMFNRK 231
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 52/230 (22%)
Query: 368 KIGGDFVAIKK---VYGDASD------QIKLLNKINHSSLIRLLGICFNGG-----NWYL 413
K+ VAIKK V+ D D +I +LN++NH ++++L I Y+
Sbjct: 75 KLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134
Query: 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473
V E A + ++ + +L + ++ G+ Y+HS +H+D+K +N L
Sbjct: 135 VLEIADSDFKKLF---RTPVYLTELHIKTLLYNLLVGVKYVHSAGI---LHRDLKPANCL 188
Query: 474 LDTDFRAKIANFALAR------------PAERQEGEF-------------ALTSHIVGTK 508
++ D K+ +F LAR P +E + LT H+V T+
Sbjct: 189 VNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVV-TR 247
Query: 509 GYMAPEYL---ENGLVSTKLDVYAFGVLMLEMLSG-KEAPALYSEENMLL 554
Y APE + EN + +DV++ G + E+L+ KE A +++ L
Sbjct: 248 WYRAPELILLQEN--YTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLF 295
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 345 EELQAATDDFNPSCWIKGSVY------RGKIGGDFVAIKKVYG--DASDQIKLLNKINHS 396
+ + DD P + Y R G +A+K++ ++ +Q +LL ++ S
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 397 S-------LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI------QI 443
+ G F G+ ++ E ++ SL + + +D Q I +I
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICME-LMDTSLDKFYK----QVIDKGQTIPEDILGKI 158
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG---EFAL 500
A+ + L +LHS + +H+D+K SNVL++ + K+ +F ++ G +
Sbjct: 159 AVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS-------GYLVDSVA 209
Query: 501 TSHIVGTKGYMAPEYLENGL----VSTKLDVYAFGVLMLEM 537
+ G K YMAPE + L S K D+++ G+ M+E+
Sbjct: 210 KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +L I + LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A G
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA----G 177
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
+ V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 178 TSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 375 AIKKVYGDASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK 433
I K D S++I++L + H ++I L + +G + YLV E G L I + K
Sbjct: 59 VIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ--K 116
Query: 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL-LDTDFRA---KIANFALAR 489
F + + + + YLHS VH+D+K SN+L +D +I +F A+
Sbjct: 117 FFSEREASFVLHTIGKTVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Query: 490 PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ G + T ++APE L+ D+++ G+L+ ML+G
Sbjct: 174 QLRAENGLLMTPCY---TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQE-GEFALTS-HIVG 506
GL YLH+ +H D+K NVLL +D RA + +F A + G+ LT +I G
Sbjct: 176 GLEYLHTRRI---LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
T+ +MAPE + K+D+++ +ML ML+G
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D + + + + H ++ LL + G Y+V+E L I + +++ +
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 442 --QIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEG 496
+ L Y H +H+D+K NVLL + K+ +F +A Q G
Sbjct: 132 ASHYMRQILEALRYCHDNNI---IHRDVKPENVLLASKENSAPVKLGDFGVAI----QLG 184
Query: 497 EFALTSH-IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
E L + VGT +MAPE ++ +DV+ GV++ +LSG
Sbjct: 185 ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 450 GLNYLHSFTNPPHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQE-GEFALTS-HIVG 506
GL YLH+ +H D+K NVLL +D RA + +F A + G+ LT +I G
Sbjct: 178 GLEYLHTRRI---LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
T+ +MAPE + K+D+++ +ML ML+G
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 376 IKKVYGDASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434
I K D +++I++L + H ++I L + +G Y+V E G L I + KF
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ--KF 112
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF----RAKIANFALARP 490
+ + + + YLH+ VH+D+K SN+L + +I +F A+
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ G + T ++APE LE D+++ GVL+ ML+G
Sbjct: 170 LRAENGLLMTPCY---TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 18/184 (9%)
Query: 366 RGKIGGDFVAIKKV-YGDASDQIKLLNKINHSSL-----IRLLGICFNGGNWYLVYENAV 419
R K + VA+K + G+ D+ INH SL +R + + +V E A
Sbjct: 38 RDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 97
Query: 420 NGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-- 477
G L I + G+F + R + +G++Y H+ H+D+K N LLD
Sbjct: 98 GGELFERICN-AGRFSEDEARFFFQ-QLISGVSYCHAMQV---CHRDLKLENTLLDGSPA 152
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKL-DVYAFGVLMLE 536
R KI +F ++ + + VGT Y+APE L K+ DV++ GV +
Sbjct: 153 PRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 208
Query: 537 MLSG 540
ML G
Sbjct: 209 MLVG 212
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 38/235 (16%)
Query: 385 DQIKLLNKINHSS--LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
++I LNK+ S +IRL Y+V E N L+ W+ K K +D +R
Sbjct: 103 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKK--KSIDPWERKS 159
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
++ L +H+ VH D+K +N L+ D K+ +F +A + S
Sbjct: 160 YWKNM---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 503 HIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLMLEMLSGKEAPALYSEEN 551
VG YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 216 Q-VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------- 266
Query: 552 MLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606
++N + L ++DP+ + +P + + +++ CLK+DP R
Sbjct: 267 --FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ + HS+++RL G YLV++ G L I + ++ A
Sbjct: 53 EARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIQ 110
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA---KIANFALARPAE-RQEGEFALT 501
+ + + H VH+D+K N+LL + + K+A+F LA + Q+ F
Sbjct: 111 QILEAVLHCHQMGV---VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA 167
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
GT GY++PE L +D++A GV++ +L G P + E+ L
Sbjct: 168 ----GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG--YPPFWDEDQHKL 214
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 24/164 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+I+ ++ + H +L+ L + ++YE G L + D+ K + + ++
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE-DEAVEYMR 262
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI- 504
V GL ++H +VH D+K N++ F R E + +F LT+H+
Sbjct: 263 QVCKGLCHMHENN---YVHLDLKPENIM-----------FTTKRSNELKLIDFGLTAHLD 308
Query: 505 --------VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT + APE E V D+++ GVL +LSG
Sbjct: 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 383 ASDQIKLLNKINHSSLIRLLGI------CFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436
A ++ L+ +NH ++I LL + + Y+V E ++ +L I + LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LD 124
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
+ + + G+ +LHS +H+D+K SN+++ +D KI +F LAR A G
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA----G 177
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
+ V T+ Y APE + +D+++ G +M EM+ K
Sbjct: 178 TSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 18/184 (9%)
Query: 366 RGKIGGDFVAIK------KVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAV 419
R K + VA+K K+ + +I + H +++R + + +V E A
Sbjct: 39 RDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 98
Query: 420 NGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-- 477
G L I + G+F + R + +G++Y H+ H+D+K N LLD
Sbjct: 99 GGELFERICN-AGRFSEDEARFFFQ-QLISGVSYCHAMQV---CHRDLKLENTLLDGSPA 153
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKL-DVYAFGVLMLE 536
R KI +F ++ + + VGT Y+APE L K+ DV++ GV +
Sbjct: 154 PRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 537 MLSG 540
ML G
Sbjct: 210 MLVG 213
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 81/204 (39%), Gaps = 40/204 (19%)
Query: 362 GSVY--RGKIGGDFVAIKKV---YGDASDQIKLLNKI-------NHSSLIRLLGICFNGG 409
G V+ R K G A+K+ + D+ + L ++ H +RL GG
Sbjct: 71 GEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130
Query: 410 NWYLVYE---NAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKD 466
YL E ++ W G L AQ D L +LHS VH D
Sbjct: 131 ILYLQTELCGPSLQQHCEAW-----GASLPEAQVWGYLRDTLLALAHLHSQGL---VHLD 182
Query: 467 IKCSNVLLDTDFRAKIANFAL------ARPAERQEGEFALTSHIVGTKGYMAPEYLENGL 520
+K +N+ L R K+ +F L A E QEG+ YMAPE L+ G
Sbjct: 183 VKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGD----------PRYMAPELLQ-GS 231
Query: 521 VSTKLDVYAFGVLMLEMLSGKEAP 544
T DV++ G+ +LE+ E P
Sbjct: 232 YGTAADVFSLGLTILEVACNMELP 255
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+ ++ + H +++RL G+ YL+++ G L I + ++ A
Sbjct: 60 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQ 117
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA---KIANFALARPAE-RQEGEFALT 501
+ + + H VH+++K N+LL + + K+A+F LA E Q+ F
Sbjct: 118 QILEAVLHCHQMGV---VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA 174
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
GT GY++PE L +D++A GV++ +L G P + E+ L
Sbjct: 175 ----GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG--YPPFWDEDQHRL 221
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 24/164 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+I+ ++ + H +L+ L + ++YE G L + D+ K + + ++
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE-DEAVEYMR 156
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI- 504
V GL ++H +VH D+K N++ F R E + +F LT+H+
Sbjct: 157 QVCKGLCHMHENN---YVHLDLKPENIM-----------FTTKRSNELKLIDFGLTAHLD 202
Query: 505 --------VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
GT + APE E V D+++ GVL +LSG
Sbjct: 203 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 46/221 (20%)
Query: 347 LQAATDDFNPSCWIKGSVY------RGKIGGDFVAIKKVYG--DASDQIKLLNKINHSS- 397
++ DD P + Y R G +A+K++ ++ +Q +LL ++ S
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 398 ------LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI------QIAL 445
+ G F G+ ++ E ++ SL + + +D Q I +IA+
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICME-LMDTSLDKFYK----QVIDKGQTIPEDILGKIAV 116
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI- 504
+ L +LHS + +H+D+K SNVL++ + K+ +F ++ L +
Sbjct: 117 SIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGISG---------YLVDDVA 165
Query: 505 ----VGTKGYMAPEYLENGL----VSTKLDVYAFGVLMLEM 537
G K YMAPE + L S K D+++ G+ M+E+
Sbjct: 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFN--GGNWYLVYENAVNGSLSVWINDKGGKFLDWAQ 439
+ +I+LL ++ H ++I+L+ + +N Y+V E V G + ++ K Q
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQ 110
Query: 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499
+ GL YLHS VHKDIK N+LL T KI+ +A FA
Sbjct: 111 AHGYFCQLIDGLEYLHSQGI---VHKDIKPGNLLLTTGGTLKISALGVAEALH----PFA 163
Query: 500 LTSHIVGTKGYMA--PEYLENGLVS---TKLDVYAFGVLMLEMLSG 540
++G A P + NGL + K+D+++ GV + + +G
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%)
Query: 362 GSVYRGKIGGDFVAIK--KVYGDASDQIKLLNK-------INHSSLIRLLGICFNGGNWY 412
G VY G+ G+ VAI+ + D DQ+K + H +++ +G C + +
Sbjct: 47 GQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
++ +L + D LD + QIA ++ G+ YLH+ +HKD+K NV
Sbjct: 106 IITSLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNV 161
Query: 473 LLDTDFRAKIANFAL-----ARPAERQEGEFALTSHIVGTKGYMAPEYL--------ENG 519
D + I +F L A R+E + + + G ++APE + E+
Sbjct: 162 FYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQN---GWLCHLAPEIIRQLSPDTEEDK 217
Query: 520 L-VSTKLDVYAFGVLMLEMLSGKEAP 544
L S DV+A G + E L +E P
Sbjct: 218 LPFSKHSDVFALGTIWYE-LHAREWP 242
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 18/184 (9%)
Query: 366 RGKIGGDFVAIKKV-YGDASDQIKLLNKINHSSL-----IRLLGICFNGGNWYLVYENAV 419
R K + VA+K + G+ D+ INH SL +R + + +V E A
Sbjct: 39 RDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 98
Query: 420 NGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-- 477
G L I + G+F + R + +G++Y H+ H+D+K N LLD
Sbjct: 99 GGELFERICN-AGRFSEDEARFFFQ-QLISGVSYCHAMQV---CHRDLKLENTLLDGSPA 153
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKL-DVYAFGVLMLE 536
R KI F ++ + + VGT Y+APE L K+ DV++ GV +
Sbjct: 154 PRLKICAFGYSKSSVLH----SQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 537 MLSG 540
ML G
Sbjct: 210 MLVG 213
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 18/184 (9%)
Query: 366 RGKIGGDFVAIKKV-YGDASDQIKLLNKINHSSL-----IRLLGICFNGGNWYLVYENAV 419
R K + VA+K + G+ D+ INH SL +R + + +V E A
Sbjct: 39 RDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 98
Query: 420 NGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-- 477
G L I + G+F + R + +G++Y H+ H+D+K N LLD
Sbjct: 99 GGELFERICN-AGRFSEDEARFFFQ-QLISGVSYCHAMQV---CHRDLKLENTLLDGSPA 153
Query: 478 FRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKL-DVYAFGVLMLE 536
R KI F ++ + + VGT Y+APE L K+ DV++ GV +
Sbjct: 154 PRLKICAFGYSKSSVLH----SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 537 MLSG 540
ML G
Sbjct: 210 MLVG 213
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA- 444
+ ++ + H +++RL G YLV++ G L F D R +
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----------FEDIVAREYYSE 102
Query: 445 LDVATGLNYLHSFTNPPH----VHKDIKCSNVLLDTDFRA---KIANFALARPAE-RQEG 496
D + + + N H VH+D+K N+LL + + K+A+F LA + Q+
Sbjct: 103 ADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA 162
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
F GT GY++PE L +D++A GV++ +L G P + E+ L
Sbjct: 163 WFGF----AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG--YPPFWDEDQHRL 214
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 117/272 (43%), Gaps = 44/272 (16%)
Query: 366 RGKIGGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425
+ +G D IK +I+ L + H + +L + ++V E G L
Sbjct: 45 KNTLGSDLPRIKT-------EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD 97
Query: 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485
+I + + + R+ + + + + Y+HS + H+D+K N+L D + K+ +F
Sbjct: 98 YIISQD-RLSEEETRV-VFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDF 152
Query: 486 AL-ARPAERQEGEFALTSHIVGTKGYMAPEYLE-NGLVSTKLDVYAFGVLMLEMLSGKEA 543
L A+P + ++ L + G+ Y APE ++ + ++ DV++ G+L+ ++ G
Sbjct: 153 GLCAKP--KGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG--- 206
Query: 544 PALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNY--PPVTAILVIRLIESCLKK 601
L D ++++ L M+G Y P + I L++ L+
Sbjct: 207 --------FLPFD-----------DDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQV 247
Query: 602 DPSGRPAMDKIAQS--ISRFLNASLAWELSKN 631
DP R +M + I + N + W+ SKN
Sbjct: 248 DPKKRISMKNLLNHPWIMQDYNYPVEWQ-SKN 278
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIA- 444
+ ++ + H +++RL G YLV++ G L F D R +
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----------FEDIVAREYYSE 102
Query: 445 LDVATGLNYLHSFTNPPH----VHKDIKCSNVLLDTDFRA---KIANFALARPAE-RQEG 496
D + + + N H VH+D+K N+LL + + K+A+F LA + Q+
Sbjct: 103 ADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA 162
Query: 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554
F GT GY++PE L +D++A GV++ +L G P + E+ L
Sbjct: 163 WFGFA----GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG--YPPFWDEDQHRL 214
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 35/221 (15%)
Query: 349 AATDDFNPSCWIKGSVYRGKI-------GGDFVAIKKVYGDASDQIKLLNKINHS----- 396
A TDD+ S + G GK+ G A+K +Y D K +++H
Sbjct: 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY----DSPKARQEVDHHWQASG 80
Query: 397 --SLIRLLGICFNGGN----WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATG 450
++ +L + N + ++ E G L I ++G + + +I D+ T
Sbjct: 81 GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 140
Query: 451 LNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
+ +LHS H+D+K N+L + D K+ +F A+ + + AL + T
Sbjct: 141 IQFLHSHNI---AHRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCY-T 192
Query: 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
Y+APE L D+++ GV+M +L G P YS
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG--FPPFYS 231
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
+++++ + H L+ L + + ++V + + G L + + F + ++ I
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ-QNVHFKEETVKLFIC- 122
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
++ L+YL N +H+D+K N+LLD I +F +A R E +T+ +
Sbjct: 123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR---ETQITT-MA 175
Query: 506 GTKGYMAPEYL---ENGLVSTKLDVYAFGVLMLEMLSGK 541
GTK YMAPE + S +D ++ GV E+L G+
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 35/221 (15%)
Query: 349 AATDDFNPSCWIKGSVYRGKI-------GGDFVAIKKVYGDASDQIKLLNKINHS----- 396
A TDD+ S + G GK+ G A+K +Y D K +++H
Sbjct: 6 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY----DSPKARQEVDHHWQASG 61
Query: 397 --SLIRLLGICFNGGN----WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATG 450
++ +L + N + ++ E G L I ++G + + +I D+ T
Sbjct: 62 GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 121
Query: 451 LNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEGEFALTSHIVGT 507
+ +LHS H+D+K N+L + D K+ +F A+ + + AL + T
Sbjct: 122 IQFLHSHNI---AHRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCY-T 173
Query: 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
Y+APE L D+++ GV+M +L G P YS
Sbjct: 174 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG--FPPFYS 212
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505
+V L+ +HS +H+D+K N+LLD K+A+F + E V
Sbjct: 182 EVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAV 236
Query: 506 GTKGYMAPEYLE----NGLVSTKLDVYAFGVLMLEMLSG 540
GT Y++PE L+ +G + D ++ GV + EML G
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 376 IKKVYGDASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434
I K D +++I++L + H ++I L + +G Y+V E G L I + KF
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ--KF 112
Query: 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF----RAKIANFALARP 490
+ + + + YLH+ VH+D+K SN+L + +I +F A+
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169
Query: 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+ G + T ++APE LE D+++ GVL+ L+G
Sbjct: 170 LRAENGLLXTPCY---TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
WA R A +V L+ +HS +H+D+K N+LLD K+A+F + EG
Sbjct: 169 WA-RFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EG 222
Query: 497 EFALTSHIVGTKGYMAPEYLE----NGLVSTKLDVYAFGVLMLEMLSG 540
VGT Y++PE L+ +G + D ++ GV + EML G
Sbjct: 223 -MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 120/318 (37%), Gaps = 67/318 (21%)
Query: 366 RGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWYLVYE 416
R K G++V ++++ +A ++ + NH +++ ++V
Sbjct: 31 RYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 90
Query: 417 NAVNGSLSVWINDKGGKFLDWAQRIQIAL---DVATGLNYLHSFTNPPHVHKDIKCSNVL 473
GS I F+D + IA V L+Y+H +VH+ +K S++L
Sbjct: 91 FMAYGSAKDLI---CTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHIL 144
Query: 474 LDTDFRAKI----ANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL--VSTKLDV 527
+ D + + +N ++ +RQ + V +++PE L+ L K D+
Sbjct: 145 ISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 204
Query: 528 YAFGVLMLEMLSG----KEAPALYSEENMLLVDVLN---PVLHKEDGEESLRHLMDPSM- 579
Y+ G+ E+ +G K+ PA +L++ LN P L + M PS
Sbjct: 205 YSVGITACELANGHVPFKDMPA-----TQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRS 259
Query: 580 ------------------QGNYP--PVTAIL---VIRLIESCLKKDPSGRPAMDKIAQSI 616
G+ P P +E CL+++P RP S
Sbjct: 260 VANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP-------SA 312
Query: 617 SRFLNASLAWELSKNISE 634
S LN S ++ + SE
Sbjct: 313 STLLNHSFFKQIKRRASE 330
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 120/318 (37%), Gaps = 67/318 (21%)
Query: 366 RGKIGGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWYLVYE 416
R K G++V ++++ +A ++ + NH +++ ++V
Sbjct: 47 RYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 106
Query: 417 NAVNGSLSVWINDKGGKFLDWAQRIQIAL---DVATGLNYLHSFTNPPHVHKDIKCSNVL 473
GS I F+D + IA V L+Y+H +VH+ +K S++L
Sbjct: 107 FMAYGSAKDLI---CTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHIL 160
Query: 474 LDTDFRAKI----ANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL--VSTKLDV 527
+ D + + +N ++ +RQ + V +++PE L+ L K D+
Sbjct: 161 ISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 220
Query: 528 YAFGVLMLEMLSG----KEAPALYSEENMLLVDVLN---PVLHKEDGEESLRHLMDPSM- 579
Y+ G+ E+ +G K+ PA +L++ LN P L + M PS
Sbjct: 221 YSVGITACELANGHVPFKDMPA-----TQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRS 275
Query: 580 ------------------QGNYP--PVTAIL---VIRLIESCLKKDPSGRPAMDKIAQSI 616
G+ P P +E CL+++P RP S
Sbjct: 276 VANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP-------SA 328
Query: 617 SRFLNASLAWELSKNISE 634
S LN S ++ + SE
Sbjct: 329 STLLNHSFFKQIKRRASE 346
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 384 SDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQI 443
++I ++N+++H LI L + L+ E G L I + K + A+ I
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE-AEVINY 154
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA--KIANFALARPAERQEGEFALT 501
GL ++H + VH DIK N++ +T + KI +F LA E +
Sbjct: 155 MRQACEGLKHMHEHSI---VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----IV 207
Query: 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
T + APE ++ V D++A GVL +LSG
Sbjct: 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
WA R A +V L+ +HS +H+D+K N+LLD K+A+F + EG
Sbjct: 174 WA-RFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EG 227
Query: 497 EFALTSHIVGTKGYMAPEYLE----NGLVSTKLDVYAFGVLMLEMLSG 540
VGT Y++PE L+ +G + D ++ GV + EML G
Sbjct: 228 -MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 442 QIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT 501
+I L LN+L N +H+DIK SN+LLD K+ +F ++ Q +
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGIS----GQLVDSIAK 182
Query: 502 SHIVGTKGYMAPEYLENGL----VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557
+ G + YMAPE ++ + DV++ G+ + E+ +G+ Y + N + D
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP---YPKWNSVF-DQ 238
Query: 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRP 607
L V+ + + + S + + P I + CL KD S RP
Sbjct: 239 LTQVVKGDPPQ------LSNSEEREFSPS----FINFVNLCLTKDESKRP 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496
WA R A +V L+ +HS +H+D+K N+LLD K+A+F + EG
Sbjct: 174 WA-RFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EG 227
Query: 497 EFALTSHIVGTKGYMAPEYLE----NGLVSTKLDVYAFGVLMLEMLSG 540
VGT Y++PE L+ +G + D ++ GV + EML G
Sbjct: 228 -MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 34/201 (16%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGIC----- 405
G V+ R + G VA+KKV + A +IK+L + H +++ L+ IC
Sbjct: 32 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS 91
Query: 406 -FN--GGNWYLVY---ENAVNGSLSVWINDKGGKF-LDWAQRIQIALDVATGLNYLHSFT 458
+N G+ YLV+ E+ + G LS + KF L +R+ L GL Y+H
Sbjct: 92 PYNRCKGSIYLVFDFCEHDLAGLLSNVL----VKFTLSEIKRVMQML--LNGLYYIHRNK 145
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARP-AERQEGEFALTSHIVGTKGYMAPEYLE 517
+H+D+K +NVL+ D K+A+F LAR + + + + V T Y PE L
Sbjct: 146 I---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 202
Query: 518 NGL-VSTKLDVYAFGVLMLEM 537
+D++ G +M EM
Sbjct: 203 GERDYGPPIDLWGAGCIMAEM 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 368 KIGGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGI----CFNGGNWYLVY 415
K G+ VAIKK+ +IK+L H ++I + I F N +
Sbjct: 33 KPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92
Query: 416 ENAVNGSLSVWI------NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKC 469
+ + L I +D F+ R A+ V G N +H+D+K
Sbjct: 93 QELMQTDLHRVISTQMLSDDHIQYFIYQTLR---AVKVLHGSNV---------IHRDLKP 140
Query: 470 SNVLLDTDFRAKIANFALAR-----PAERQE--GEFALTSHIVGTKGYMAPE-YLENGLV 521
SN+L++++ K+ +F LAR A+ E G+ + + V T+ Y APE L +
Sbjct: 141 SNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKY 200
Query: 522 STKLDVYAFGVLMLEML 538
S +DV++ G ++ E+
Sbjct: 201 SRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 368 KIGGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGI----CFNGGNWYLVY 415
K G+ VAIKK+ +IK+L H ++I + I F N +
Sbjct: 33 KPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92
Query: 416 ENAVNGSLSVWI------NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKC 469
+ + L I +D F+ R A+ V G N +H+D+K
Sbjct: 93 QELMQTDLHRVISTQMLSDDHIQYFIYQTLR---AVKVLHGSNV---------IHRDLKP 140
Query: 470 SNVLLDTDFRAKIANFALAR-----PAERQE--GEFALTSHIVGTKGYMAPE-YLENGLV 521
SN+L++++ K+ +F LAR A+ E G+ + + V T+ Y APE L +
Sbjct: 141 SNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKY 200
Query: 522 STKLDVYAFGVLMLEML 538
S +DV++ G ++ E+
Sbjct: 201 SRAMDVWSCGCILAELF 217
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 46/203 (22%)
Query: 374 VAIKKV---YGDASD------QIKLLNKINHSSLIRLLGIC-----FNGGNWYLVYENAV 419
VAIKKV + D D +I +LN++ +IRL + Y+V E A
Sbjct: 54 VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD 113
Query: 420 NGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR 479
+ ++ K FL I ++ G N++H +H+D+K +N LL+ D
Sbjct: 114 SDLKKLF---KTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCS 167
Query: 480 AKIANFALARPAERQEG--------------------EFALTSHIVGTKGYMAPEYL--- 516
K+ +F LAR ++ + LTSH+V T+ Y APE +
Sbjct: 168 VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQ 226
Query: 517 ENGLVSTKLDVYAFGVLMLEMLS 539
EN + +D+++ G + E+L+
Sbjct: 227 EN--YTKSIDIWSTGCIFAELLN 247
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 398 LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSF 457
+I L + N L+ E A G + + + + I++ + G+ YLH
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150
Query: 458 TNPPHVHKDIKCSNVLLDTDF---RAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514
VH D+K N+LL + + KI +F ++R G I+GT Y+APE
Sbjct: 151 NI---VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI----GHACELREIMGTPEYLAPE 203
Query: 515 YLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL 574
L ++T D++ G++ ML +P + ED +E+ ++
Sbjct: 204 ILNYDPITTATDMWNIGIIAY-MLLTHTSPFV-----------------GEDNQETYLNI 245
Query: 575 MDPSMQGNYPPVTAI--LVIRLIESCLKKDPSGRPAMD 610
++ + +++ L I+S L K+P RP +
Sbjct: 246 SQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 34/201 (16%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGIC----- 405
G V+ R + G VA+KKV + A +IK+L + H +++ L+ IC
Sbjct: 31 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS 90
Query: 406 -FN--GGNWYLVY---ENAVNGSLSVWINDKGGKF-LDWAQRIQIALDVATGLNYLHSFT 458
+N G+ YLV+ E+ + G LS + KF L +R+ L GL Y+H
Sbjct: 91 PYNRCKGSIYLVFDFCEHDLAGLLSNVL----VKFTLSEIKRVMQML--LNGLYYIHRNK 144
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARP-AERQEGEFALTSHIVGTKGYMAPEYLE 517
+H+D+K +NVL+ D K+A+F LAR + + + + V T Y PE L
Sbjct: 145 I---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 201
Query: 518 NGL-VSTKLDVYAFGVLMLEM 537
+D++ G +M EM
Sbjct: 202 GERDYGPPIDLWGAGCIMAEM 222
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 316 ASNKKLDEESRDFLESISDIAQSLKVYTFEELQAATDDFNPSCWI--------------- 360
AS D+ DFL+ I LK E++ DDF I
Sbjct: 30 ASELAQDKYVADFLQWAEPIVVRLK-----EVRLQRDDFEILKVIGRGAFSEVAVVKMKQ 84
Query: 361 KGSVYRGKIGGDFVAIKKVYGDAS----DQIKLLNKINHSSLIRLLGICFNGGNW-YLVY 415
G VY KI + +K+ G+ S ++ L+N I L F N+ YLV
Sbjct: 85 TGQVYAMKIMNKWDMLKR--GEVSCFREERDVLVN--GDRRWITQLHFAFQDENYLYLVM 140
Query: 416 ENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD 475
E V G L ++ G + R +A ++ ++ +H +VH+DIK N+LLD
Sbjct: 141 EYYVGGDLLTLLSKFGERIPAEMARFYLA-EIVMAIDSVHRLG---YVHRDIKPDNILLD 196
Query: 476 TDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLE-------NGLVSTKLDVY 528
++A+F +L + VGT Y++PE L+ G + D +
Sbjct: 197 RCGHIRLADFGSCLKLRADGTVRSLVA--VGTPDYLSPEILQAVGGGPGTGSYGPECDWW 254
Query: 529 AFGVLMLEMLSGK 541
A GV EM G+
Sbjct: 255 ALGVFAYEMFYGQ 267
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 34/203 (16%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGIC----- 405
G V+ R + G VA+KKV + A +IK+L + H +++ L+ IC
Sbjct: 32 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS 91
Query: 406 -FN--GGNWYLVY---ENAVNGSLSVWINDKGGKF-LDWAQRIQIALDVATGLNYLHSFT 458
+N G+ YLV+ E+ + G LS + KF L +R+ L GL Y+H
Sbjct: 92 PYNRCKGSIYLVFDFCEHDLAGLLSNVL----VKFTLSEIKRVMQML--LNGLYYIHRNK 145
Query: 459 NPPHVHKDIKCSNVLLDTDFRAKIANFALARP-AERQEGEFALTSHIVGTKGYMAPEYLE 517
+H+D+K +NVL+ D K+A+F LAR + + + + V T Y PE L
Sbjct: 146 I---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 202
Query: 518 NGL-VSTKLDVYAFGVLMLEMLS 539
+D++ G +M EM +
Sbjct: 203 GERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 13/165 (7%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D + + + + H ++ LL + G Y+V+E L I + +++ +
Sbjct: 74 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 133
Query: 442 --QIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEG 496
+ L Y H +H+D+K VLL + K+ F +A Q G
Sbjct: 134 ASHYMRQILEALRYCHDNNI---IHRDVKPHCVLLASKENSAPVKLGGFGVAI----QLG 186
Query: 497 EFALTSH-IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
E L + VGT +MAPE ++ +DV+ GV++ +LSG
Sbjct: 187 ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++ +L ++ H ++I L + N + L+ E G L ++ K L +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEG-EFAL 500
+ G+NYLH+ H D+K N+ LLD + K+ +F LA E +G EF
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEF-- 175
Query: 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+I GT ++APE + + + D+++ GV+ +LSG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 38/197 (19%)
Query: 368 KIGGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGI----CFNGGNWYLVY 415
K G+ VAIKK+ +IK+L H ++I + I F N +
Sbjct: 33 KPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92
Query: 416 ENAVNGSLSVWI------NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKC 469
+ + L I +D F+ R A+ V G N +H+D+K
Sbjct: 93 QELMQTDLHRVISTQMLSDDHIQYFIYQTLR---AVKVLHGSNV---------IHRDLKP 140
Query: 470 SNVLLDTDFRAKIANFALAR-----PAERQE--GEFALTSHIVGTKGYMAPE-YLENGLV 521
SN+L++++ K+ +F LAR A+ E G+ + V T+ Y APE L +
Sbjct: 141 SNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKY 200
Query: 522 STKLDVYAFGVLMLEML 538
S +DV++ G ++ E+
Sbjct: 201 SRAMDVWSCGCILAELF 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++ +L ++ H ++I L + N + L+ E G L ++ K L +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEG-EFAL 500
+ G+NYLH+ H D+K N+ LLD + K+ +F LA E ++G EF
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEF-- 175
Query: 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+I GT ++APE + + + D+++ GV+ +LSG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++ +L ++ H ++I L + N + L+ E G L ++ K L +
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEG-EFAL 500
+ G+NYLH+ H D+K N+ LLD + K+ +F LA E +G EF
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEF-- 175
Query: 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+I GT ++APE + + + D+++ GV+ +LSG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 13/165 (7%)
Query: 382 DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI 441
D + + + + H ++ LL + G Y+V+E L I + +++ +
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 442 --QIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALARPAERQEG 496
+ L Y H +H+D+K VLL + K+ F +A Q G
Sbjct: 132 ASHYMRQILEALRYCHDNNI---IHRDVKPHCVLLASKENSAPVKLGGFGVAI----QLG 184
Query: 497 EFALTSH-IVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
E L + VGT +MAPE ++ +DV+ GV++ +LSG
Sbjct: 185 ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++ +L ++ H ++I L + N + L+ E G L ++ K L +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEG-EFAL 500
+ G+NYLH+ H D+K N+ LLD + K+ +F LA E +G EF
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEF-- 175
Query: 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+I GT ++APE + + + D+++ GV+ +LSG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++ +L ++ H ++I L + N + L+ E G L ++ K L +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEG-EFAL 500
+ G+NYLH+ H D+K N+ LLD + K+ +F LA E +G EF
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEF-- 175
Query: 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+I GT ++APE + + + D+++ GV+ +LSG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 386 QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445
++ +L ++ H ++I L + N + L+ E G L ++ K L +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNV-LLDTDF---RAKIANFALARPAERQEG-EFAL 500
+ G+NYLH+ H D+K N+ LLD + K+ +F LA E +G EF
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEF-- 175
Query: 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG 540
+I GT ++APE + + + D+++ GV+ +LSG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 362 GSVY--RGKIGGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN 410
G V+ R + G VA+KKV + A +IK+L + H +++ L+ IC +
Sbjct: 32 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS 91
Query: 411 WYLVYENAVNGSLSVWINDKGG-------KF-LDWAQRIQIALDVATGLNYLHSFTNPPH 462
Y + ++ +D G KF L +R+ L GL Y+H
Sbjct: 92 PYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML--LNGLYYIHRNKI--- 146
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALARP-AERQEGEFALTSHIVGTKGYMAPEYLENGL- 520
+H+D+K +NVL+ D K+A+F LAR + + + + V T Y PE L
Sbjct: 147 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERD 206
Query: 521 VSTKLDVYAFGVLMLEMLS 539
+D++ G +M EM +
Sbjct: 207 YGPPIDLWGAGCIMAEMWT 225
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 41/273 (15%)
Query: 362 GSVYRGK-IGGDFVAIKKVYGDA---SDQIKLLNKINHSSLIRLLGICF-NGGNWYLVYE 416
G V++ K + D VAIKKV D + +++++ + H +++ L + NG V+
Sbjct: 54 GVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113
Query: 417 NAVNGSLSVWINDKGGKFLDWAQRIQIAL------DVATGLNYLHSFTNPPHVHKDIKCS 470
N V + + + Q + + L + L Y+HS H+DIK
Sbjct: 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGI---CHRDIKPQ 170
Query: 471 NVLLDTDFRA-KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGL-VSTKLDVY 528
N+LLD K+ +F A+ E + + ++ Y APE + +T +D++
Sbjct: 171 NLLLDPPSGVLKLIDFGSAKILIAGEPNVSX----ICSRYYRAPELIFGATNYTTNIDIW 226
Query: 529 AFGVLMLEMLSGKEAPALYSEENML--LVDVLNPVLHKEDGEESLRHLMDPS-MQGNYP- 584
+ G +M E++ G+ L+ E+ + LV+++ VL E+ M+P+ M+ +P
Sbjct: 227 STGCVMAELMQGQ---PLFPGESGIDQLVEIIK-VLGTPSREQI--KTMNPNYMEHKFPQ 280
Query: 585 -----------PVTAILVIRLIESCLKKDPSGR 606
P T I LI L+ PS R
Sbjct: 281 IRPHPFSKVFRPRTPPDAIDLISRLLEYTPSAR 313
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 46/223 (20%)
Query: 345 EELQAATDDFNPSCWIKGSVY------RGKIGGDFVAIKKVYG--DASDQIKLLNKINHS 396
E + DD P + Y R G A+K++ ++ +Q +LL ++ S
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDIS 86
Query: 397 S-------LIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRI------QI 443
+ G F G+ ++ E + SL + + +D Q I +I
Sbjct: 87 XRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYK----QVIDKGQTIPEDILGKI 141
Query: 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSH 503
A+ + L +LHS + +H+D+K SNVL++ + K +F ++ L
Sbjct: 142 AVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISG---------YLVDD 190
Query: 504 I-----VGTKGYMAPEYLENGL----VSTKLDVYAFGVLMLEM 537
+ G K Y APE + L S K D+++ G+ +E+
Sbjct: 191 VAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 464 HKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVST 523
H+D+K N+L+ D A + +F +A + + + + VGT Y APE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA--SATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 524 KLDVYAFGVLMLEMLSG 540
+ D+YA ++ E L+G
Sbjct: 215 RADIYALTCVLYECLTG 231
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 49/206 (23%)
Query: 374 VAIKKV---YGDASD------QIKLLNKINHSSLIRLLGIC-----FNGGNWYLVYENAV 419
VAIKKV + D D +I +LN++ +IRL + Y+V E A
Sbjct: 56 VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIAD 115
Query: 420 NGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR 479
+ ++ K FL I ++ G ++H +H+D+K +N LL+ D
Sbjct: 116 SDLKKLF---KTPIFLTEQHVKTILYNLLLGEKFIHE---SGIIHRDLKPANCLLNQDCS 169
Query: 480 AKIANFALAR----------------------PAERQEG-EFALTSHIVGTKGYMAPEYL 516
KI +F LAR P + + LTSH+V T+ Y APE +
Sbjct: 170 VKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELI 228
Query: 517 ---ENGLVSTKLDVYAFGVLMLEMLS 539
EN + +D+++ G + E+L+
Sbjct: 229 LLQEN--YTNSIDIWSTGCIFAELLN 252
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPEN- 161
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT+ T Y+APE L D++
Sbjct: 162 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 217
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLL 554
+ GV+M +L G P YS + +
Sbjct: 218 SLGVIMYILLCG--YPPFYSNHGLAI 241
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 98 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPEN- 153
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT+ T Y+APE L D++
Sbjct: 154 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 209
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLL 554
+ GV+M +L G P YS + +
Sbjct: 210 SLGVIMYILLCG--YPPFYSNHGLAI 233
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 395 HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYL 454
H ++++L + + + +LV E G L I K K + I + + ++++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHM 122
Query: 455 HSFTNPPHVHKDIKCSNVLL---DTDFRAKIANFALAR--PAERQEGEF-ALTSHIVGTK 508
H VH+D+K N+L + + KI +F AR P + Q + T H
Sbjct: 123 HDVGV---VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH----- 174
Query: 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541
Y APE L D+++ GV++ MLSG+
Sbjct: 175 -YAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 14/140 (10%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 97 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPEN- 152
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT+ T Y+APE L D++
Sbjct: 153 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 208
Query: 529 AFGVLMLEMLSGKEAPALYS 548
+ GV+M +L G P YS
Sbjct: 209 SLGVIMYILLCG--YPPFYS 226
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 96 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPEN- 151
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT+ T Y+APE L D++
Sbjct: 152 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 207
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLL 554
+ GV+M +L G P YS + +
Sbjct: 208 SLGVIMYILLCG--YPPFYSNHGLAI 231
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 91 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPEN- 146
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT+ T Y+APE L D++
Sbjct: 147 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 202
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLL 554
+ GV+M +L G P YS + +
Sbjct: 203 SLGVIMYILLCG--YPPFYSNHGLAI 226
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPEN- 147
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT+ T Y+APE L D++
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 203
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLL 554
+ GV+M +L G P YS + +
Sbjct: 204 SLGVIMYILLCG--YPPFYSNHGLAI 227
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPEN- 145
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT+ T Y+APE L D++
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 201
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLL 554
+ GV+M +L G P YS + +
Sbjct: 202 SLGVIMYILLCG--YPPFYSNHGLAI 225
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 14/140 (10%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPEN- 191
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT+ T Y+APE L D++
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 247
Query: 529 AFGVLMLEMLSGKEAPALYS 548
+ GV+M +L G P YS
Sbjct: 248 SLGVIMYILLCG--YPPFYS 265
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPEN- 147
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT+ T Y+APE L D++
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 203
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLL 554
+ GV+M +L G P YS + +
Sbjct: 204 SLGVIMYILLCG--YPPFYSNHGLAI 227
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 14/140 (10%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 142 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPEN- 197
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT+ T Y+APE L D++
Sbjct: 198 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 253
Query: 529 AFGVLMLEMLSGKEAPALYS 548
+ GV+M +L G P YS
Sbjct: 254 SLGVIMYILLCG--YPPFYS 271
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 14/146 (9%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPEN- 145
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT T Y+APE L D++
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTEPCY-TPYYVAPEVLGPEKYDKSCDMW 201
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLL 554
+ GV+M +L G P YS + +
Sbjct: 202 SLGVIMYILLCG--YPPFYSNHGLAI 225
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 29/165 (17%)
Query: 463 VHKDIKCSNVLLDTDFRAKIANFALA-RPAERQEGEFALTSHIVGTKGYMAPEYLE---- 517
+H+D+K SN+LLD + K+ +F ++ R + + + + G YMAPE ++
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS-----AGCAAYMAPERIDPPDP 201
Query: 518 -NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD 576
+ DV++ G+ ++E+ +G + P + + +VL VL +E
Sbjct: 202 TKPDYDIRADVWSLGISLVELATG-QFPYKNCKTDF---EVLTKVLQEE----------- 246
Query: 577 PSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS--ISRF 619
P + + + ++ CL KD RP +K+ + I R+
Sbjct: 247 PPLLPGHMGFSGDFQ-SFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472
+V E G L I D+G + + +I + + YLHS H+D+K N
Sbjct: 136 IVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINI---AHRDVKPEN- 191
Query: 473 LLDTDFRA----KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVY 528
LL T R K+ +F A+ +LT+ T Y+APE L D +
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCY-TPYYVAPEVLGPEKYDKSCDXW 247
Query: 529 AFGVLMLEMLSGKEAPALYSEENMLL 554
+ GV+ +L G P YS + +
Sbjct: 248 SLGVIXYILLCG--YPPFYSNHGLAI 271
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 16/191 (8%)
Query: 370 GGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429
G D V +KK +I +LN H +++ L + +++E + IN
Sbjct: 42 GTDQVLVKK-------EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT 94
Query: 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489
+ L+ + + V L +LHS H DI+ N++ T + I +
Sbjct: 95 SAFE-LNEREIVSYVHQVCEALQFLHSHNIG---HFDIRPENIIYQTRRSSTIKIIEFGQ 150
Query: 490 PAERQEGE-FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS 548
+ + G+ F L + Y APE ++ +VST D+++ G L+ +LSG P L
Sbjct: 151 ARQLKPGDNFRL---LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN-PFLAE 206
Query: 549 EENMLLVDVLN 559
++ +++N
Sbjct: 207 TNQQIIENIMN 217
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 97/242 (40%), Gaps = 59/242 (24%)
Query: 386 QIKLLNKIN----HSSLIRLLGICFNGGNWYLVYENAVNGS-LSVWINDKGGKFLDWAQR 440
++ LL K+ H +IRLL + LV E + L +I +KG + R
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSR 142
Query: 441 IQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR-AKIANFALARPAERQEGEFA 499
V + + HS VH+DIK N+L+D AK+ +F G A
Sbjct: 143 CFFG-QVVAAIQHCHSRGV---VHRDIKDENILIDLRRGCAKLIDF----------GSGA 188
Query: 500 LT-----SHIVGTKGYMAPEYLE----NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE 550
L + GT+ Y PE++ + L +T V++ G+L+ +M+ G + P +E
Sbjct: 189 LLHDEPYTDFDGTRVYSPPEWISRHQYHALPAT---VWSLGILLYDMVCG-DIPFERDQE 244
Query: 551 NMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMD 610
+L LH +P + LI CL PS RP+++
Sbjct: 245 ------ILEAELH-------------------FPAHVSPDCCALIRRCLAPKPSSRPSLE 279
Query: 611 KI 612
+I
Sbjct: 280 EI 281
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA-KIANFALA---RPAERQEGEFALT 501
++ L+Y HS +H+D+K NVL+D + R ++ ++ LA P + E+ +
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQ----EYNVR 191
Query: 502 SHIVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP 560
V ++ + PE L + + LD+++ G ++ M+ KE P + +N + +
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAK 247
Query: 561 VLHKED 566
VL ED
Sbjct: 248 VLGTED 253
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA-KIANFALA---RPAERQEGEFALT 501
++ L+Y HS +H+D+K NV++D + R ++ ++ LA P + E+ +
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----EYNVR 191
Query: 502 SHIVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP 560
V ++ + PE L + + LD+++ G ++ M+ KE P + +N + +
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAK 247
Query: 561 VLHKED 566
VL ED
Sbjct: 248 VLGTED 253
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA-KIANFALA---RPAERQEGEFALT 501
++ L+Y HS +H+D+K NV++D + R ++ ++ LA P + E+ +
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----EYNVR 191
Query: 502 SHIVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP 560
V ++ + PE L + + LD+++ G ++ M+ KE P + +N + +
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAK 247
Query: 561 VLHKED 566
VL ED
Sbjct: 248 VLGTED 253
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA-KIANFALA---RPAERQEGEFALT 501
++ L+Y HS +H+D+K NV++D + R ++ ++ LA P + E+ +
Sbjct: 144 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----EYNVR 196
Query: 502 SHIVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP 560
V ++ + PE L + + LD+++ G ++ M+ KE P + +N + +
Sbjct: 197 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAK 252
Query: 561 VLHKED 566
VL ED
Sbjct: 253 VLGTED 258
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA-KIANFALA---RPAERQEGEFALT 501
++ L+Y HS +H+D+K NV++D + R ++ ++ LA P + E+ +
Sbjct: 138 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----EYNVR 190
Query: 502 SHIVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP 560
V ++ + PE L + + LD+++ G ++ M+ KE P + +N + +
Sbjct: 191 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAK 246
Query: 561 VLHKED 566
VL ED
Sbjct: 247 VLGTED 252
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 388 KLLNKINHSSLIRLLGICFNGGNW-----YLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442
+ L ++ H S++++ + Y+V E SL KG K L A+ I
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK---RSKGQK-LPVAEAIA 186
Query: 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502
L++ L+YLHS V+ D+K N++L T+ + K+ + A + F
Sbjct: 187 YLLEILPALSYLHSIG---LVYNDLKPENIML-TEEQLKLIDLG----AVSRINSFG--- 235
Query: 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFG 531
++ GT G+ APE + G + D+Y G
Sbjct: 236 YLYGTPGFQAPEIVRTG-PTVATDIYTVG 263
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA-KIANFALA---RPAERQEGEFALT 501
++ L+Y HS +H+D+K NV++D + R ++ ++ LA P + E+ +
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----EYNVR 191
Query: 502 SHIVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP 560
V ++ + PE L + + LD+++ G ++ M+ KE P + +N + +
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAK 247
Query: 561 VLHKED 566
VL ED
Sbjct: 248 VLGTED 253
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA-KIANFALA---RPAERQEGEFALT 501
++ L+Y HS +H+D+K NV++D + R ++ ++ LA P + E+ +
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----EYNVR 191
Query: 502 SHIVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP 560
V ++ + PE L + + LD+++ G ++ M+ KE P + +N + +
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAK 247
Query: 561 VLHKED 566
VL ED
Sbjct: 248 VLGTED 253
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,232,454
Number of Sequences: 62578
Number of extensions: 752810
Number of successful extensions: 4141
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 332
Number of HSP's that attempted gapping in prelim test: 2005
Number of HSP's gapped (non-prelim): 1115
length of query: 635
length of database: 14,973,337
effective HSP length: 105
effective length of query: 530
effective length of database: 8,402,647
effective search space: 4453402910
effective search space used: 4453402910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)