Query 042486
Match_columns 635
No_of_seqs 762 out of 4456
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 06:40:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042486.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042486hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 4E-50 8.6E-55 421.2 24.2 277 338-621 61-354 (361)
2 KOG0192 Tyrosine kinase specif 100.0 2.9E-43 6.2E-48 366.8 20.6 240 362-624 55-308 (362)
3 KOG0581 Mitogen-activated prot 100.0 8.6E-44 1.9E-48 353.6 14.9 232 361-615 92-335 (364)
4 KOG0197 Tyrosine kinases [Sign 100.0 9.6E-42 2.1E-46 354.2 17.2 238 362-623 220-465 (468)
5 KOG0575 Polo-like serine/threo 100.0 9.6E-41 2.1E-45 349.9 16.5 226 362-615 32-269 (592)
6 KOG0595 Serine/threonine-prote 100.0 1.9E-40 4E-45 332.4 17.0 190 352-550 10-220 (429)
7 KOG0615 Serine/threonine prote 100.0 4.8E-41 1E-45 335.9 12.0 228 362-615 186-437 (475)
8 KOG0591 NIMA (never in mitosis 100.0 3.5E-41 7.6E-46 321.3 6.5 235 362-618 33-284 (375)
9 KOG1026 Nerve growth factor re 100.0 4.1E-40 9E-45 357.7 14.7 240 362-624 500-767 (774)
10 KOG4721 Serine/threonine prote 100.0 5E-40 1.1E-44 338.3 12.0 245 340-618 119-367 (904)
11 KOG0593 Predicted protein kina 100.0 2.6E-39 5.7E-44 311.4 10.3 245 362-615 16-284 (396)
12 KOG0578 p21-activated serine/t 100.0 8.3E-39 1.8E-43 332.8 14.9 227 362-615 287-523 (550)
13 KOG0198 MEKK and related serin 100.0 5.9E-39 1.3E-43 324.7 13.3 237 362-619 31-280 (313)
14 PHA02988 hypothetical protein; 100.0 6.1E-38 1.3E-42 322.1 20.5 232 362-621 34-281 (283)
15 KOG0592 3-phosphoinositide-dep 100.0 1E-38 2.3E-43 329.1 14.7 249 352-628 73-348 (604)
16 KOG0661 MAPK related serine/th 100.0 1E-38 2.2E-43 324.5 13.7 245 362-615 24-291 (538)
17 KOG0582 Ste20-like serine/thre 100.0 4.6E-38 1E-42 317.4 18.1 241 362-615 40-293 (516)
18 KOG0598 Ribosomal protein S6 k 100.0 1.4E-38 3.1E-43 316.3 13.3 247 352-628 25-291 (357)
19 KOG0196 Tyrosine kinase, EPH ( 100.0 4.3E-39 9.2E-44 342.8 9.4 263 340-625 608-897 (996)
20 KOG0600 Cdc2-related protein k 100.0 1E-37 2.2E-42 319.4 17.5 245 362-615 131-400 (560)
21 PLN00113 leucine-rich repeat r 100.0 2.8E-36 6E-41 360.6 28.2 262 342-623 683-955 (968)
22 KOG0588 Serine/threonine prote 100.0 2.3E-37 4.9E-42 325.3 15.6 226 362-616 26-264 (786)
23 cd05102 PTKc_VEGFR3 Catalytic 100.0 6.5E-37 1.4E-41 322.6 18.9 239 362-622 21-337 (338)
24 KOG3653 Transforming growth fa 100.0 7.3E-37 1.6E-41 310.7 17.9 255 362-624 224-508 (534)
25 KOG0193 Serine/threonine prote 100.0 3.2E-37 6.9E-42 321.8 12.7 239 362-622 406-656 (678)
26 KOG0659 Cdk activating kinase 100.0 1E-36 2.2E-41 289.0 14.6 244 362-615 16-281 (318)
27 KOG0597 Serine-threonine prote 100.0 5.9E-37 1.3E-41 316.0 12.6 225 362-615 16-251 (808)
28 KOG0583 Serine/threonine prote 100.0 3.7E-36 8.1E-41 316.3 18.6 231 362-622 31-280 (370)
29 KOG1095 Protein tyrosine kinas 100.0 2.1E-36 4.7E-41 340.2 16.2 240 362-624 706-966 (1025)
30 cd06649 PKc_MEK2 Catalytic dom 100.0 2.2E-35 4.7E-40 310.2 21.5 244 362-616 19-302 (331)
31 cd05052 PTKc_Abl Catalytic dom 100.0 1.8E-35 3.9E-40 300.1 19.7 234 362-619 20-262 (263)
32 cd05631 STKc_GRK4 Catalytic do 100.0 9.1E-36 2E-40 306.2 17.7 231 362-615 14-261 (285)
33 cd05571 STKc_PKB Catalytic dom 100.0 7.3E-36 1.6E-40 312.7 16.8 226 362-615 9-251 (323)
34 PLN00034 mitogen-activated pro 100.0 6.4E-35 1.4E-39 309.4 23.7 226 362-615 88-328 (353)
35 cd05048 PTKc_Ror Catalytic Dom 100.0 1.7E-35 3.8E-40 303.4 18.6 235 362-619 19-283 (283)
36 KOG0663 Protein kinase PITSLRE 100.0 4E-36 8.6E-41 293.1 13.0 244 362-615 90-361 (419)
37 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-35 3.3E-40 316.5 18.6 236 362-619 49-374 (375)
38 PTZ00263 protein kinase A cata 100.0 6.8E-36 1.5E-40 313.7 15.7 223 362-615 32-271 (329)
39 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-35 3.2E-40 316.4 18.1 237 362-620 52-373 (374)
40 cd05096 PTKc_DDR1 Catalytic do 100.0 2.2E-35 4.8E-40 306.2 18.8 240 362-617 19-303 (304)
41 cd05612 STKc_PRKX_like Catalyt 100.0 6.7E-36 1.5E-40 308.2 14.7 223 362-615 15-254 (291)
42 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.5E-35 5.4E-40 299.8 18.6 233 362-619 19-265 (266)
43 cd05068 PTKc_Frk_like Catalyti 100.0 3.4E-35 7.4E-40 297.7 19.3 233 362-618 20-260 (261)
44 KOG0616 cAMP-dependent protein 100.0 1E-35 2.3E-40 286.1 14.3 233 362-628 58-307 (355)
45 PF07714 Pkinase_Tyr: Protein 100.0 9.7E-36 2.1E-40 301.7 14.3 232 362-616 13-259 (259)
46 KOG0585 Ca2+/calmodulin-depend 100.0 1.6E-35 3.5E-40 300.7 15.7 244 351-617 96-374 (576)
47 KOG1094 Discoidin domain recep 100.0 1E-35 2.2E-40 307.9 13.7 242 362-619 552-804 (807)
48 cd05072 PTKc_Lyn Catalytic dom 100.0 4.6E-35 1E-39 296.6 18.3 234 362-619 20-261 (261)
49 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2E-35 4.2E-40 310.8 16.1 231 362-615 15-257 (333)
50 cd05033 PTKc_EphR Catalytic do 100.0 1.1E-34 2.5E-39 294.7 20.4 235 362-620 18-266 (266)
51 cd05585 STKc_YPK1_like Catalyt 100.0 3.4E-35 7.3E-40 306.1 16.8 226 362-615 7-247 (312)
52 cd05108 PTKc_EGFR Catalytic do 100.0 8.7E-35 1.9E-39 303.6 19.8 248 354-626 9-275 (316)
53 cd06650 PKc_MEK1 Catalytic dom 100.0 1.3E-34 2.8E-39 304.5 21.2 248 362-622 19-304 (333)
54 cd05593 STKc_PKB_gamma Catalyt 100.0 4.3E-35 9.2E-40 307.5 17.5 226 362-615 9-251 (328)
55 cd07848 STKc_CDKL5 Catalytic d 100.0 5.8E-35 1.3E-39 300.2 18.1 244 362-615 15-284 (287)
56 KOG0201 Serine/threonine prote 100.0 3.5E-36 7.5E-41 303.9 8.7 227 362-615 27-263 (467)
57 KOG0580 Serine/threonine prote 100.0 9.1E-36 2E-40 278.8 10.7 236 352-615 22-273 (281)
58 cd05595 STKc_PKB_beta Catalyti 100.0 3.9E-35 8.4E-40 307.1 16.8 226 362-615 9-251 (323)
59 cd05093 PTKc_TrkB Catalytic do 100.0 1.3E-34 2.8E-39 298.1 20.0 242 362-626 19-286 (288)
60 cd05116 PTKc_Syk Catalytic dom 100.0 1.6E-34 3.5E-39 292.1 19.9 233 362-619 9-255 (257)
61 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.5E-35 1.2E-39 300.9 16.4 246 362-615 19-285 (288)
62 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.3E-34 2.8E-39 292.6 18.6 230 362-616 18-255 (256)
63 cd05039 PTKc_Csk_like Catalyti 100.0 1.9E-34 4.1E-39 291.2 19.8 229 362-618 20-255 (256)
64 KOG0194 Protein tyrosine kinas 100.0 3.3E-35 7.1E-40 310.3 14.7 237 362-624 171-425 (474)
65 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.5E-34 3.4E-39 293.9 19.3 236 362-620 19-268 (268)
66 cd08228 STKc_Nek6 Catalytic do 100.0 1.8E-34 4E-39 293.1 19.8 236 362-619 16-265 (267)
67 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-34 2.3E-39 297.8 18.0 235 362-619 19-283 (283)
68 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.2E-34 2.7E-39 300.5 18.6 245 362-615 19-288 (303)
69 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-34 4.1E-39 292.2 19.4 240 353-615 3-260 (263)
70 cd05094 PTKc_TrkC Catalytic do 100.0 1.7E-34 3.6E-39 297.7 19.4 238 362-622 19-285 (291)
71 PTZ00426 cAMP-dependent protei 100.0 4.5E-35 9.7E-40 308.6 15.4 223 362-615 44-284 (340)
72 cd05084 PTKc_Fes Catalytic dom 100.0 1.8E-34 3.8E-39 290.7 19.1 232 362-617 9-251 (252)
73 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.7E-34 8.1E-39 293.7 21.8 249 362-620 18-282 (283)
74 cd05111 PTK_HER3 Pseudokinase 100.0 2.8E-34 6.1E-39 294.2 20.7 240 362-626 21-275 (279)
75 cd08229 STKc_Nek7 Catalytic do 100.0 1.8E-34 4E-39 293.1 18.9 237 362-620 16-266 (267)
76 cd05115 PTKc_Zap-70 Catalytic 100.0 2.7E-34 5.9E-39 290.7 20.0 235 362-620 9-256 (257)
77 cd07862 STKc_CDK6 Catalytic do 100.0 1.7E-34 3.6E-39 297.3 18.7 245 362-615 15-287 (290)
78 cd05055 PTKc_PDGFR Catalytic d 100.0 2.2E-34 4.8E-39 298.5 19.8 245 353-619 36-301 (302)
79 cd05045 PTKc_RET Catalytic dom 100.0 2.6E-34 5.6E-39 296.1 20.1 239 362-623 14-290 (290)
80 cd05082 PTKc_Csk Catalytic dom 100.0 2.2E-34 4.7E-39 290.9 19.2 230 362-619 20-256 (256)
81 KOG0605 NDR and related serine 100.0 4.2E-35 9.2E-40 302.9 14.1 252 350-628 139-455 (550)
82 KOG1989 ARK protein kinase fam 100.0 7.1E-35 1.5E-39 318.6 16.5 239 362-623 51-315 (738)
83 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.1E-34 2.3E-39 293.8 16.8 232 362-618 20-260 (261)
84 cd05054 PTKc_VEGFR Catalytic d 100.0 2.2E-34 4.8E-39 303.1 19.4 239 362-622 21-336 (337)
85 PHA03211 serine/threonine kina 100.0 6.5E-34 1.4E-38 309.2 23.6 257 353-615 170-455 (461)
86 cd05062 PTKc_IGF-1R Catalytic 100.0 2E-34 4.4E-39 294.8 18.0 243 352-617 6-276 (277)
87 cd07859 STKc_TDY_MAPK_plant Ca 100.0 9.7E-35 2.1E-39 305.8 16.1 245 362-615 14-290 (338)
88 cd05053 PTKc_FGFR Catalytic do 100.0 1.9E-34 4.2E-39 297.3 17.9 236 362-620 26-292 (293)
89 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-34 2.9E-39 303.1 16.9 226 362-615 10-256 (323)
90 cd08529 STKc_FA2-like Catalyti 100.0 2.9E-34 6.2E-39 289.5 18.7 229 362-615 14-253 (256)
91 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.8E-34 8.3E-39 293.7 19.8 251 362-619 18-283 (284)
92 cd05608 STKc_GRK1 Catalytic do 100.0 2.3E-34 5E-39 295.0 18.0 232 362-615 7-257 (280)
93 PHA03212 serine/threonine kina 100.0 2.9E-34 6.4E-39 307.7 19.5 255 353-615 93-376 (391)
94 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.6E-34 5.7E-39 308.4 19.1 238 362-621 51-399 (400)
95 cd05594 STKc_PKB_alpha Catalyt 100.0 8.4E-35 1.8E-39 304.9 14.7 227 362-615 9-252 (325)
96 cd05059 PTKc_Tec_like Catalyti 100.0 3.1E-34 6.7E-39 289.9 18.2 230 362-616 18-255 (256)
97 KOG4257 Focal adhesion tyrosin 100.0 1.3E-34 2.7E-39 301.3 15.6 234 362-621 403-651 (974)
98 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.2E-34 7E-39 289.9 18.0 231 362-617 18-256 (256)
99 KOG0589 Serine/threonine prote 100.0 3.4E-35 7.5E-40 304.5 11.0 227 364-615 22-258 (426)
100 KOG0694 Serine/threonine prote 100.0 1.5E-34 3.2E-39 306.7 15.7 245 352-628 368-634 (694)
101 cd05049 PTKc_Trk Catalytic dom 100.0 3.9E-34 8.4E-39 292.8 18.5 233 362-617 19-279 (280)
102 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.2E-35 1.6E-39 308.5 13.5 232 362-615 15-285 (350)
103 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.5E-34 9.8E-39 292.2 18.7 233 362-617 20-276 (277)
104 KOG0594 Protein kinase PCTAIRE 100.0 9.2E-34 2E-38 282.0 20.2 245 362-615 25-302 (323)
105 cd05591 STKc_nPKC_epsilon Cata 100.0 2.3E-34 4.9E-39 301.1 16.7 226 362-615 9-254 (321)
106 cd05071 PTKc_Src Catalytic dom 100.0 6.5E-34 1.4E-38 288.7 19.6 234 362-620 20-261 (262)
107 cd05596 STKc_ROCK Catalytic do 100.0 1.3E-34 2.7E-39 308.9 15.0 240 350-615 41-304 (370)
108 cd05605 STKc_GRK4_like Catalyt 100.0 2.5E-34 5.4E-39 295.6 16.7 231 362-615 14-261 (285)
109 cd05066 PTKc_EphR_A Catalytic 100.0 6E-34 1.3E-38 289.6 19.3 235 362-619 18-266 (267)
110 cd05590 STKc_nPKC_eta Catalyti 100.0 2.3E-34 5.1E-39 300.8 16.6 226 362-615 9-253 (320)
111 KOG0610 Putative serine/threon 100.0 2.8E-34 6E-39 288.0 16.1 243 362-628 91-402 (459)
112 cd05060 PTKc_Syk_like Catalyti 100.0 7.7E-34 1.7E-38 287.0 19.7 234 362-620 9-256 (257)
113 PTZ00267 NIMA-related protein 100.0 5E-34 1.1E-38 314.1 19.8 231 362-615 81-323 (478)
114 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 9.8E-34 2.1E-38 287.5 20.4 236 362-620 16-266 (267)
115 cd05599 STKc_NDR_like Catalyti 100.0 1.8E-34 4E-39 307.2 15.8 232 362-615 15-296 (364)
116 cd05607 STKc_GRK7 Catalytic do 100.0 4.7E-34 1E-38 292.3 18.2 234 362-617 7-252 (277)
117 KOG4278 Protein tyrosine kinas 100.0 6.7E-35 1.5E-39 302.7 11.8 238 362-623 281-527 (1157)
118 KOG0658 Glycogen synthase kina 100.0 6.2E-35 1.3E-39 289.8 10.9 243 362-615 38-306 (364)
119 KOG0660 Mitogen-activated prot 100.0 1.4E-34 3E-39 286.8 13.4 244 362-615 36-310 (359)
120 cd05588 STKc_aPKC Catalytic do 100.0 3.8E-34 8.1E-39 300.5 17.5 235 362-615 9-262 (329)
121 cd05589 STKc_PKN Catalytic dom 100.0 3.2E-34 6.9E-39 300.4 17.0 225 362-615 13-257 (324)
122 KOG2345 Serine/threonine prote 100.0 4.1E-35 8.8E-40 275.5 9.0 242 362-620 35-301 (302)
123 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6E-34 1.3E-38 288.4 18.3 232 362-618 20-259 (260)
124 cd05582 STKc_RSK_N N-terminal 100.0 7E-35 1.5E-39 304.6 11.7 222 362-611 10-245 (318)
125 KOG0611 Predicted serine/threo 100.0 1.6E-34 3.5E-39 287.2 13.6 226 362-617 67-305 (668)
126 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6.9E-34 1.5E-38 292.0 18.9 251 362-620 18-284 (284)
127 cd06637 STKc_TNIK Catalytic do 100.0 3.2E-34 7E-39 292.1 16.0 230 362-615 20-269 (272)
128 cd05628 STKc_NDR1 Catalytic do 100.0 5E-34 1.1E-38 303.7 18.1 233 362-615 15-293 (363)
129 cd05618 STKc_aPKC_iota Catalyt 100.0 4.3E-34 9.2E-39 300.0 17.3 235 362-615 9-262 (329)
130 cd05109 PTKc_HER2 Catalytic do 100.0 1.2E-33 2.7E-38 289.3 20.2 240 362-626 21-275 (279)
131 cd05091 PTKc_Ror2 Catalytic do 100.0 6.7E-34 1.5E-38 291.7 18.3 234 362-618 19-282 (283)
132 cd05089 PTKc_Tie1 Catalytic do 100.0 1.2E-33 2.5E-38 292.3 20.1 236 362-623 16-279 (297)
133 cd05040 PTKc_Ack_like Catalyti 100.0 8.5E-34 1.8E-38 286.5 18.6 234 362-617 9-256 (257)
134 cd05088 PTKc_Tie2 Catalytic do 100.0 7.1E-34 1.5E-38 294.9 18.5 241 362-628 21-289 (303)
135 cd05067 PTKc_Lck_Blk Catalytic 100.0 9.8E-34 2.1E-38 286.8 19.0 232 362-618 20-259 (260)
136 cd05069 PTKc_Yes Catalytic dom 100.0 1.2E-33 2.6E-38 286.2 19.6 232 362-618 20-259 (260)
137 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-34 3.4E-39 303.5 13.3 231 362-615 15-263 (330)
138 cd05614 STKc_MSK2_N N-terminal 100.0 3.1E-34 6.8E-39 301.5 15.6 231 362-615 14-267 (332)
139 cd05592 STKc_nPKC_theta_delta 100.0 5.5E-34 1.2E-38 297.5 17.3 225 362-614 9-247 (316)
140 cd05629 STKc_NDR_like_fungal C 100.0 3.3E-34 7.2E-39 306.7 16.0 232 362-615 15-305 (377)
141 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.4E-33 3.1E-38 292.6 20.3 239 362-623 29-300 (304)
142 cd05620 STKc_nPKC_delta Cataly 100.0 5.4E-34 1.2E-38 297.6 17.2 226 362-615 9-248 (316)
143 cd05107 PTKc_PDGFR_beta Cataly 100.0 1E-33 2.3E-38 303.7 19.7 237 362-620 51-400 (401)
144 cd05626 STKc_LATS2 Catalytic d 100.0 5.5E-34 1.2E-38 305.3 17.4 233 362-615 15-305 (381)
145 cd05083 PTKc_Chk Catalytic dom 100.0 1E-33 2.2E-38 285.6 18.2 228 362-618 20-253 (254)
146 cd05575 STKc_SGK Catalytic dom 100.0 6.2E-34 1.3E-38 298.1 17.1 221 362-610 9-242 (323)
147 cd05085 PTKc_Fer Catalytic dom 100.0 1.9E-33 4.1E-38 282.7 20.0 231 362-617 9-249 (250)
148 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.1E-33 2.5E-38 293.9 18.8 238 362-622 32-302 (307)
149 KOG0599 Phosphorylase kinase g 100.0 8.1E-35 1.8E-39 276.3 9.2 219 370-615 41-283 (411)
150 cd05619 STKc_nPKC_theta Cataly 100.0 7.7E-34 1.7E-38 296.4 17.5 225 362-614 9-247 (316)
151 cd05570 STKc_PKC Catalytic dom 100.0 6.6E-34 1.4E-38 297.2 16.8 226 362-615 9-252 (318)
152 cd06624 STKc_ASK Catalytic dom 100.0 1.2E-33 2.7E-38 287.4 18.4 246 346-615 2-265 (268)
153 cd05075 PTKc_Axl Catalytic dom 100.0 2.4E-33 5.1E-38 285.7 20.5 235 362-619 13-271 (272)
154 cd05034 PTKc_Src_like Catalyti 100.0 1.4E-33 3.1E-38 285.6 18.6 233 362-618 20-260 (261)
155 PRK13184 pknD serine/threonine 100.0 1.3E-33 2.7E-38 320.2 20.1 248 362-629 16-300 (932)
156 cd06615 PKc_MEK Catalytic doma 100.0 2.4E-33 5.2E-38 291.6 20.7 244 362-616 15-288 (308)
157 cd05043 PTK_Ryk Pseudokinase d 100.0 2.1E-33 4.5E-38 287.7 19.8 238 362-622 20-279 (280)
158 cd05621 STKc_ROCK2 Catalytic d 100.0 5.1E-34 1.1E-38 304.0 15.9 244 346-615 37-304 (370)
159 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.2E-33 4.8E-38 292.7 20.3 238 362-622 26-296 (314)
160 cd05058 PTKc_Met_Ron Catalytic 100.0 2.2E-33 4.9E-38 284.3 19.7 238 362-621 9-261 (262)
161 cd05065 PTKc_EphR_B Catalytic 100.0 1.4E-33 3.1E-38 287.1 18.2 235 362-619 18-268 (269)
162 cd05035 PTKc_Axl_like Catalyti 100.0 2.9E-33 6.3E-38 284.9 20.4 235 362-619 13-272 (273)
163 cd08227 PK_STRAD_alpha Pseudok 100.0 2E-33 4.4E-38 294.7 19.7 251 362-615 14-307 (327)
164 cd05587 STKc_cPKC Catalytic do 100.0 9.5E-34 2.1E-38 296.8 17.1 226 362-615 14-257 (324)
165 cd06646 STKc_MAP4K5 Catalytic 100.0 1.4E-33 3.1E-38 286.6 17.9 232 362-616 23-266 (267)
166 cd05061 PTKc_InsR Catalytic do 100.0 2E-33 4.2E-38 289.3 19.0 248 353-623 7-282 (288)
167 cd06654 STKc_PAK1 Catalytic do 100.0 1.6E-33 3.5E-38 291.2 18.4 228 362-615 34-270 (296)
168 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.1E-33 4.6E-38 296.5 19.5 239 362-622 21-342 (343)
169 PTZ00283 serine/threonine prot 100.0 7.3E-34 1.6E-38 313.2 16.5 241 352-615 32-297 (496)
170 cd05616 STKc_cPKC_beta Catalyt 100.0 8.6E-34 1.9E-38 297.0 16.3 226 362-615 14-257 (323)
171 cd05603 STKc_SGK2 Catalytic do 100.0 5.9E-34 1.3E-38 297.9 15.1 221 362-610 9-242 (321)
172 cd08219 STKc_Nek3 Catalytic do 100.0 2E-33 4.3E-38 283.6 18.3 229 362-615 14-252 (255)
173 cd05032 PTKc_InsR_like Catalyt 100.0 1.2E-33 2.6E-38 288.7 16.7 233 362-617 20-276 (277)
174 cd05092 PTKc_TrkA Catalytic do 100.0 2.2E-33 4.8E-38 287.7 18.6 233 362-617 19-279 (280)
175 cd05047 PTKc_Tie Catalytic dom 100.0 2.8E-33 6.1E-38 285.2 19.2 233 362-620 9-269 (270)
176 cd05602 STKc_SGK1 Catalytic do 100.0 7.4E-34 1.6E-38 297.8 15.2 224 362-613 9-245 (325)
177 cd06651 STKc_MEKK3 Catalytic d 100.0 3.9E-33 8.4E-38 283.5 19.9 230 362-615 16-261 (266)
178 cd05625 STKc_LATS1 Catalytic d 100.0 1.1E-33 2.3E-38 303.3 16.4 232 362-615 15-305 (382)
179 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.5E-33 3.3E-38 295.6 17.2 233 362-615 9-260 (327)
180 cd06619 PKc_MKK5 Catalytic dom 100.0 3.9E-33 8.6E-38 285.7 19.8 229 362-615 15-253 (279)
181 cd07868 STKc_CDK8 Catalytic do 100.0 4.7E-33 1E-37 290.5 20.6 182 362-547 15-219 (317)
182 cd07863 STKc_CDK4 Catalytic do 100.0 3E-33 6.6E-38 287.5 18.9 244 362-615 14-285 (288)
183 cd05630 STKc_GRK6 Catalytic do 100.0 1.8E-33 3.9E-38 289.2 17.2 231 362-615 14-261 (285)
184 cd05598 STKc_LATS Catalytic do 100.0 7.2E-34 1.6E-38 304.0 14.8 232 362-615 15-301 (376)
185 cd06638 STKc_myosinIIIA Cataly 100.0 1.7E-33 3.7E-38 289.1 16.9 253 341-616 7-284 (286)
186 cd06612 STKc_MST1_2 Catalytic 100.0 3.2E-33 7E-38 281.8 18.7 230 362-615 17-253 (256)
187 cd05050 PTKc_Musk Catalytic do 100.0 3E-33 6.5E-38 287.8 18.6 243 353-618 6-288 (288)
188 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3E-33 6.6E-38 286.5 18.4 250 362-619 18-283 (284)
189 cd05615 STKc_cPKC_alpha Cataly 100.0 2E-33 4.3E-38 294.2 16.9 220 362-609 14-246 (323)
190 cd05051 PTKc_DDR Catalytic dom 100.0 6.1E-33 1.3E-37 286.4 20.1 240 362-617 19-295 (296)
191 cd05112 PTKc_Itk Catalytic dom 100.0 3.6E-33 7.9E-38 281.7 18.0 230 362-616 18-255 (256)
192 cd00192 PTKc Catalytic domain 100.0 4.9E-33 1.1E-37 280.8 19.0 233 362-617 9-262 (262)
193 cd06655 STKc_PAK2 Catalytic do 100.0 3.5E-33 7.6E-38 288.7 18.2 232 362-621 33-273 (296)
194 cd05073 PTKc_Hck Catalytic dom 100.0 5.4E-33 1.2E-37 281.5 19.2 232 362-618 20-259 (260)
195 cd07861 STKc_CDK1_euk Catalyti 100.0 2.6E-33 5.7E-38 287.4 17.1 246 362-615 14-282 (285)
196 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.5E-33 5.4E-38 291.5 17.2 244 362-615 20-286 (309)
197 cd05097 PTKc_DDR_like Catalyti 100.0 5.3E-33 1.2E-37 287.1 19.3 240 362-617 19-294 (295)
198 cd06631 STKc_YSK4 Catalytic do 100.0 4.3E-33 9.3E-38 282.8 18.2 232 362-615 14-262 (265)
199 KOG2052 Activin A type IB rece 100.0 6.6E-33 1.4E-37 280.0 18.9 253 362-621 225-505 (513)
200 KOG0596 Dual specificity; seri 100.0 5.9E-34 1.3E-38 293.9 11.6 230 362-615 375-627 (677)
201 cd06639 STKc_myosinIIIB Cataly 100.0 3.3E-33 7.1E-38 287.9 17.2 252 341-615 11-287 (291)
202 cd05604 STKc_SGK3 Catalytic do 100.0 1.4E-33 3E-38 295.7 14.6 223 362-612 9-244 (325)
203 cd08223 STKc_Nek4 Catalytic do 100.0 5.6E-33 1.2E-37 280.4 18.5 229 362-615 14-254 (257)
204 PHA03209 serine/threonine kina 100.0 4.5E-33 9.8E-38 295.6 18.7 255 352-615 66-351 (357)
205 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.3E-33 1.1E-37 282.4 18.4 230 362-615 14-264 (267)
206 cd05622 STKc_ROCK1 Catalytic d 100.0 2.1E-33 4.5E-38 299.5 16.2 248 343-616 34-305 (371)
207 PTZ00036 glycogen synthase kin 100.0 1.8E-33 4E-38 306.2 15.9 252 353-615 67-351 (440)
208 cd06640 STKc_MST4 Catalytic do 100.0 1.1E-32 2.4E-37 281.9 20.7 226 362-615 18-253 (277)
209 cd05632 STKc_GRK5 Catalytic do 100.0 4.2E-33 9.1E-38 286.5 17.5 231 362-615 14-261 (285)
210 cd06643 STKc_SLK Catalytic dom 100.0 1.5E-32 3.2E-37 281.8 21.5 230 362-615 19-262 (282)
211 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.2E-33 9.2E-38 285.7 17.3 248 344-615 8-279 (282)
212 cd05041 PTKc_Fes_like Catalyti 100.0 1.2E-32 2.5E-37 277.2 20.2 232 362-617 9-250 (251)
213 cd05044 PTKc_c-ros Catalytic d 100.0 3.8E-33 8.3E-38 283.7 16.8 233 362-617 9-268 (269)
214 cd05110 PTKc_HER4 Catalytic do 100.0 9.5E-33 2.1E-37 286.4 19.8 237 362-623 21-272 (303)
215 cd07867 STKc_CDC2L6 Catalytic 100.0 5.4E-33 1.2E-37 289.8 18.0 182 362-547 15-219 (317)
216 cd05057 PTKc_EGFR_like Catalyt 100.0 1.5E-32 3.3E-37 281.2 20.8 237 362-623 21-272 (279)
217 cd06642 STKc_STK25-YSK1 Cataly 100.0 7.2E-33 1.6E-37 283.3 18.2 226 362-615 18-253 (277)
218 PHA03207 serine/threonine kina 100.0 4.6E-33 1E-37 299.2 17.5 246 362-615 106-375 (392)
219 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-32 2.9E-37 280.0 20.0 237 362-617 9-268 (269)
220 cd05056 PTKc_FAK Catalytic dom 100.0 1.2E-32 2.7E-37 280.3 19.7 235 362-622 20-268 (270)
221 cd06652 STKc_MEKK2 Catalytic d 100.0 9.6E-33 2.1E-37 280.4 18.8 230 362-615 16-261 (265)
222 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-33 2.5E-38 300.6 12.5 230 362-615 15-293 (360)
223 cd06656 STKc_PAK3 Catalytic do 100.0 5.4E-33 1.2E-37 287.4 17.2 228 362-615 33-269 (297)
224 cd07839 STKc_CDK5 Catalytic do 100.0 5.2E-33 1.1E-37 285.2 16.9 245 362-615 14-281 (284)
225 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.7E-33 8E-38 289.1 15.8 244 362-615 20-286 (301)
226 cd07853 STKc_NLK Catalytic dom 100.0 4.7E-33 1E-37 297.2 17.0 244 362-615 14-288 (372)
227 cd05574 STKc_phototropin_like 100.0 8.6E-33 1.9E-37 288.3 18.5 243 362-628 15-299 (316)
228 cd06613 STKc_MAP4K3_like Catal 100.0 1.6E-32 3.6E-37 277.7 19.8 232 362-615 17-260 (262)
229 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.2E-32 2.5E-37 289.9 19.3 239 362-623 26-297 (334)
230 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.6E-32 3.4E-37 278.6 19.5 223 362-616 9-261 (262)
231 PTZ00284 protein kinase; Provi 100.0 6.6E-33 1.4E-37 304.9 18.0 258 345-615 122-438 (467)
232 cd06609 STKc_MST3_like Catalyt 100.0 1.1E-32 2.4E-37 281.4 18.4 227 362-615 15-251 (274)
233 cd08221 STKc_Nek9 Catalytic do 100.0 1.7E-32 3.6E-37 276.9 19.2 230 362-616 14-254 (256)
234 cd07876 STKc_JNK2 Catalytic do 100.0 1.1E-32 2.4E-37 293.0 18.8 240 362-615 35-315 (359)
235 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 9.4E-33 2E-37 283.6 17.2 239 362-616 19-267 (284)
236 cd08218 STKc_Nek1 Catalytic do 100.0 1.3E-32 2.7E-37 277.8 17.6 229 362-615 14-253 (256)
237 KOG0577 Serine/threonine prote 100.0 8.2E-34 1.8E-38 293.6 9.0 224 362-615 40-278 (948)
238 cd05572 STKc_cGK_PKG Catalytic 100.0 1.8E-32 3.9E-37 277.8 18.8 238 362-627 7-261 (262)
239 cd06645 STKc_MAP4K3 Catalytic 100.0 8.2E-33 1.8E-37 281.1 16.3 231 362-615 23-265 (267)
240 cd07847 STKc_CDKL1_4 Catalytic 100.0 2E-32 4.4E-37 280.9 19.3 246 362-615 15-283 (286)
241 cd06608 STKc_myosinIII_like Ca 100.0 9.5E-33 2.1E-37 281.2 16.7 242 351-615 5-272 (275)
242 cd07860 STKc_CDK2_3 Catalytic 100.0 8.6E-33 1.9E-37 283.6 16.5 245 362-615 14-281 (284)
243 cd05042 PTKc_Aatyk Catalytic d 100.0 2.5E-32 5.5E-37 277.9 19.8 237 362-617 9-268 (269)
244 cd05597 STKc_DMPK_like Catalyt 100.0 1.1E-32 2.3E-37 289.8 17.5 233 362-615 15-266 (331)
245 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-32 2.3E-37 279.6 17.0 231 362-615 15-257 (265)
246 cd06644 STKc_STK10_LOK Catalyt 100.0 2.6E-32 5.7E-37 281.4 20.1 230 362-615 26-269 (292)
247 KOG0584 Serine/threonine prote 100.0 2E-33 4.4E-38 295.4 11.5 227 362-615 54-296 (632)
248 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.1E-32 4.5E-37 279.7 18.6 213 373-617 46-274 (274)
249 cd05586 STKc_Sck1_like Catalyt 100.0 3.3E-33 7.1E-38 293.5 13.0 227 362-615 7-253 (330)
250 cd05095 PTKc_DDR2 Catalytic do 100.0 2.2E-32 4.7E-37 282.6 18.8 230 372-617 47-295 (296)
251 cd06630 STKc_MEKK1 Catalytic d 100.0 1.9E-32 4.2E-37 278.3 18.0 234 362-615 14-264 (268)
252 cd07874 STKc_JNK3 Catalytic do 100.0 1.1E-32 2.3E-37 292.6 16.8 251 352-615 17-311 (355)
253 cd05623 STKc_MRCK_alpha Cataly 100.0 1.1E-32 2.4E-37 289.8 16.7 230 362-615 15-266 (332)
254 cd08528 STKc_Nek10 Catalytic d 100.0 3.6E-32 7.8E-37 276.7 19.9 232 362-617 14-268 (269)
255 KOG4279 Serine/threonine prote 100.0 3.1E-33 6.6E-38 293.7 12.1 229 362-614 589-831 (1226)
256 cd06629 STKc_MAPKKK_Bck1_like 100.0 3E-32 6.6E-37 277.7 19.3 234 362-615 15-269 (272)
257 cd06611 STKc_SLK_like Catalyti 100.0 1.5E-32 3.4E-37 281.2 17.1 230 362-615 19-262 (280)
258 PF00069 Pkinase: Protein kina 100.0 9.2E-33 2E-37 279.0 15.3 231 362-615 13-257 (260)
259 smart00219 TyrKc Tyrosine kina 100.0 4E-32 8.7E-37 273.8 19.7 231 362-616 13-258 (258)
260 KOG0199 ACK and related non-re 100.0 7.2E-33 1.6E-37 291.7 14.4 233 362-617 124-370 (1039)
261 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-32 2.4E-37 289.6 15.9 230 362-615 15-266 (331)
262 cd07841 STKc_CDK7 Catalytic do 100.0 2.6E-32 5.7E-37 282.1 18.4 244 362-615 14-282 (298)
263 cd07875 STKc_JNK1 Catalytic do 100.0 2.3E-32 5E-37 291.0 18.3 240 362-615 38-318 (364)
264 KOG0032 Ca2+/calmodulin-depend 100.0 3.1E-32 6.8E-37 286.4 18.8 228 362-615 49-293 (382)
265 cd08220 STKc_Nek8 Catalytic do 100.0 3.5E-32 7.5E-37 274.3 18.2 228 362-615 14-253 (256)
266 KOG1025 Epidermal growth facto 100.0 4.1E-33 8.9E-38 298.1 12.0 238 361-623 709-961 (1177)
267 cd08216 PK_STRAD Pseudokinase 100.0 4.9E-32 1.1E-36 282.3 19.9 250 362-615 16-295 (314)
268 cd05046 PTK_CCK4 Pseudokinase 100.0 3.6E-32 7.7E-37 277.6 18.3 233 362-617 19-274 (275)
269 cd08217 STKc_Nek2 Catalytic do 100.0 5.3E-32 1.2E-36 273.9 19.3 232 362-615 14-262 (265)
270 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.1E-32 1.1E-36 279.0 19.4 256 352-615 5-288 (291)
271 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.4E-32 9.6E-37 275.1 18.6 236 362-615 15-264 (267)
272 cd06632 STKc_MEKK1_plant Catal 100.0 4.5E-32 9.8E-37 273.6 18.5 227 362-615 14-255 (258)
273 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.1E-32 8.8E-37 279.0 18.3 231 362-615 15-262 (286)
274 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.5E-32 3.1E-37 278.1 14.7 225 362-617 9-258 (258)
275 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.6E-32 3.5E-37 289.8 15.6 238 362-615 29-298 (343)
276 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.5E-32 9.7E-37 274.0 18.2 222 362-616 9-258 (259)
277 cd07832 STKc_CCRK Catalytic do 100.0 5.3E-32 1.2E-36 277.7 18.7 245 362-615 14-282 (286)
278 cd06607 STKc_TAO Catalytic dom 100.0 7.6E-32 1.6E-36 280.2 19.9 224 362-615 29-267 (307)
279 cd05580 STKc_PKA Catalytic dom 100.0 4E-32 8.7E-37 279.8 17.6 223 362-615 15-254 (290)
280 cd06641 STKc_MST3 Catalytic do 100.0 6.5E-32 1.4E-36 276.3 19.0 226 362-615 18-253 (277)
281 cd06623 PKc_MAPKK_plant_like C 100.0 7.5E-32 1.6E-36 273.0 19.2 230 362-615 15-256 (264)
282 KOG4645 MAPKKK (MAP kinase kin 100.0 8.9E-34 1.9E-38 317.0 5.5 241 352-615 1235-1494(1509)
283 cd05609 STKc_MAST Catalytic do 100.0 4.1E-32 8.8E-37 281.9 17.6 245 362-628 15-283 (305)
284 cd07833 STKc_CDKL Catalytic do 100.0 3.8E-32 8.3E-37 279.1 17.2 246 362-615 15-285 (288)
285 cd06659 STKc_PAK6 Catalytic do 100.0 2.8E-32 6.1E-37 282.1 16.2 228 362-615 35-271 (297)
286 KOG0574 STE20-like serine/thre 100.0 7.8E-34 1.7E-38 272.7 4.0 230 362-615 47-283 (502)
287 cd07835 STKc_CDK1_like Catalyt 100.0 4.6E-32 9.9E-37 278.0 17.2 245 362-615 13-280 (283)
288 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.2E-31 4.7E-36 271.1 22.0 237 362-617 9-267 (268)
289 KOG4717 Serine/threonine prote 100.0 2.8E-32 6.1E-37 278.3 15.3 220 368-615 40-270 (864)
290 cd06658 STKc_PAK5 Catalytic do 100.0 2.2E-32 4.7E-37 282.2 14.6 228 362-615 36-272 (292)
291 cd07844 STKc_PCTAIRE_like Cata 100.0 6.6E-32 1.4E-36 278.1 18.1 244 362-615 19-288 (291)
292 PTZ00266 NIMA-related protein 100.0 3.2E-32 7E-37 309.9 16.9 241 352-615 13-295 (1021)
293 cd06626 STKc_MEKK4 Catalytic d 100.0 1.1E-31 2.4E-36 271.9 19.2 233 362-615 14-261 (264)
294 cd08226 PK_STRAD_beta Pseudoki 100.0 1E-31 2.2E-36 282.0 19.5 251 362-615 14-308 (328)
295 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.6E-32 5.7E-37 280.2 14.5 246 362-615 15-283 (286)
296 KOG0033 Ca2+/calmodulin-depend 100.0 5.2E-34 1.1E-38 267.1 1.6 227 362-615 25-267 (355)
297 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.3E-31 2.8E-36 273.1 19.4 235 362-619 13-272 (273)
298 KOG0667 Dual-specificity tyros 100.0 3.9E-32 8.5E-37 288.4 15.9 244 362-615 200-502 (586)
299 cd08225 STKc_Nek5 Catalytic do 100.0 5.3E-32 1.1E-36 273.1 16.1 229 362-615 14-254 (257)
300 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.2E-31 2.6E-36 274.9 18.4 230 362-615 15-261 (283)
301 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.3E-31 2.8E-36 275.6 18.6 233 362-615 15-266 (287)
302 PHA03390 pk1 serine/threonine- 100.0 1.7E-31 3.7E-36 271.8 19.3 226 362-615 30-262 (267)
303 cd05577 STKc_GRK Catalytic dom 100.0 8.8E-32 1.9E-36 275.3 17.1 241 362-628 7-264 (277)
304 cd07843 STKc_CDC2L1 Catalytic 100.0 1.2E-31 2.6E-36 276.6 18.2 244 362-615 19-290 (293)
305 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.7E-31 3.6E-36 271.2 19.0 230 362-615 16-261 (264)
306 cd05579 STKc_MAST_like Catalyt 100.0 5.7E-32 1.2E-36 273.7 15.4 240 362-626 7-265 (265)
307 cd06647 STKc_PAK_I Catalytic d 100.0 9.2E-32 2E-36 277.7 17.3 228 362-615 33-269 (293)
308 cd06614 STKc_PAK Catalytic dom 100.0 1.2E-31 2.6E-36 275.6 18.0 230 362-615 33-270 (286)
309 cd06635 STKc_TAO1 Catalytic do 100.0 2.2E-31 4.8E-36 278.0 20.0 232 362-623 39-285 (317)
310 cd06917 STKc_NAK1_like Catalyt 100.0 1.7E-31 3.6E-36 273.0 18.5 227 362-615 15-255 (277)
311 cd07836 STKc_Pho85 Catalytic d 100.0 2.1E-31 4.6E-36 273.1 19.3 244 362-615 14-281 (284)
312 cd05122 PKc_STE Catalytic doma 100.0 3.2E-31 6.9E-36 265.7 19.7 229 362-615 14-251 (253)
313 cd06616 PKc_MKK4 Catalytic dom 100.0 8.1E-32 1.8E-36 277.0 15.7 233 362-615 18-267 (288)
314 cd07842 STKc_CDK8_like Catalyt 100.0 1.1E-31 2.4E-36 279.6 16.9 249 362-615 14-313 (316)
315 cd06648 STKc_PAK_II Catalytic 100.0 2.2E-31 4.7E-36 273.7 18.8 228 362-615 33-269 (285)
316 cd07837 STKc_CdkB_plant Cataly 100.0 2E-31 4.4E-36 275.0 18.0 245 362-615 15-291 (295)
317 cd05633 STKc_GRK3 Catalytic do 100.0 2E-31 4.4E-36 273.1 17.6 227 362-615 8-255 (279)
318 PLN00009 cyclin-dependent kina 100.0 1.7E-31 3.8E-36 275.5 17.0 245 362-615 16-284 (294)
319 cd05576 STKc_RPK118_like Catal 100.0 1.2E-31 2.6E-36 267.9 14.7 214 362-610 7-224 (237)
320 cd05611 STKc_Rim15_like Cataly 100.0 2.6E-31 5.6E-36 269.0 17.3 238 362-627 10-260 (260)
321 cd06606 STKc_MAPKKK Catalytic 100.0 4.4E-31 9.5E-36 265.8 18.9 231 362-615 14-257 (260)
322 cd08530 STKc_CNK2-like Catalyt 100.0 2.3E-31 4.9E-36 268.2 16.7 227 362-615 14-253 (256)
323 cd05578 STKc_Yank1 Catalytic d 100.0 1E-31 2.2E-36 271.7 14.1 227 362-614 14-254 (258)
324 cd07849 STKc_ERK1_2_like Catal 100.0 1.2E-31 2.5E-36 282.5 14.9 260 352-621 5-300 (336)
325 cd07831 STKc_MOK Catalytic dom 100.0 7.4E-31 1.6E-35 268.7 20.1 241 362-615 13-279 (282)
326 KOG0983 Mitogen-activated prot 100.0 1.2E-31 2.6E-36 255.0 13.0 230 362-615 106-349 (391)
327 cd07845 STKc_CDK10 Catalytic d 100.0 4.3E-31 9.2E-36 274.7 18.4 244 362-615 21-290 (309)
328 cd08215 STKc_Nek Catalytic dom 100.0 5E-31 1.1E-35 265.5 18.3 229 362-615 14-255 (258)
329 cd07850 STKc_JNK Catalytic dom 100.0 3.7E-31 7.9E-36 280.6 18.1 240 362-615 30-311 (353)
330 cd07838 STKc_CDK4_6_like Catal 100.0 1E-30 2.3E-35 268.2 19.9 244 362-615 13-284 (287)
331 cd07865 STKc_CDK9 Catalytic do 100.0 8.2E-31 1.8E-35 272.2 18.4 247 362-615 26-307 (310)
332 cd06634 STKc_TAO2 Catalytic do 100.0 7.9E-31 1.7E-35 272.7 18.1 226 362-617 29-269 (308)
333 cd06633 STKc_TAO3 Catalytic do 100.0 1.4E-30 3E-35 271.5 19.9 224 362-615 35-273 (313)
334 cd07840 STKc_CDK9_like Catalyt 100.0 9.7E-31 2.1E-35 268.2 18.3 245 362-615 13-284 (287)
335 cd07830 STKc_MAK_like Catalyti 100.0 4.7E-31 1E-35 270.4 15.9 246 362-615 13-280 (283)
336 cd05606 STKc_beta_ARK Catalyti 100.0 1E-30 2.2E-35 267.7 18.2 227 362-615 8-255 (278)
337 KOG0666 Cyclin C-dependent kin 100.0 5.3E-32 1.2E-36 261.6 8.0 259 354-616 26-338 (438)
338 KOG0604 MAP kinase-activated p 100.0 9.5E-32 2.1E-36 258.8 9.5 233 362-615 76-322 (400)
339 cd07879 STKc_p38delta_MAPK13 C 100.0 4.9E-31 1.1E-35 278.4 15.9 252 352-620 15-304 (342)
340 cd05583 STKc_MSK_N N-terminal 100.0 5.5E-31 1.2E-35 270.9 15.8 244 362-628 14-276 (288)
341 cd05118 STKc_CMGC Catalytic do 100.0 7.1E-31 1.5E-35 268.8 16.3 243 362-615 13-280 (283)
342 cd06618 PKc_MKK7 Catalytic dom 100.0 1.1E-30 2.3E-35 270.0 17.7 230 362-615 29-273 (296)
343 cd06657 STKc_PAK4 Catalytic do 100.0 1.4E-30 2.9E-35 268.8 18.4 228 362-615 34-270 (292)
344 cd06627 STKc_Cdc7_like Catalyt 100.0 2.1E-30 4.5E-35 260.7 19.1 227 362-615 14-251 (254)
345 cd07852 STKc_MAPK15 Catalytic 100.0 1.4E-30 3E-35 274.4 18.1 247 362-615 21-295 (337)
346 KOG0579 Ste20-like serine/thre 100.0 1.1E-31 2.3E-36 279.4 9.1 230 362-615 46-289 (1187)
347 cd07864 STKc_CDK12 Catalytic d 100.0 1.3E-30 2.9E-35 269.8 17.3 243 362-615 21-299 (302)
348 cd05581 STKc_PDK1 Catalytic do 100.0 5.4E-31 1.2E-35 269.1 14.1 229 362-615 15-277 (280)
349 KOG1024 Receptor-like protein 100.0 8E-31 1.7E-35 260.3 13.6 237 362-621 298-557 (563)
350 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-30 2.4E-35 274.1 15.3 250 362-620 14-296 (330)
351 cd07855 STKc_ERK5 Catalytic do 100.0 8.8E-31 1.9E-35 275.6 14.5 246 362-615 19-294 (334)
352 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.8E-30 3.9E-35 272.5 16.3 256 347-615 5-288 (328)
353 KOG0586 Serine/threonine prote 100.0 6.1E-31 1.3E-35 276.5 12.4 225 362-615 70-306 (596)
354 cd05613 STKc_MSK1_N N-terminal 100.0 3.1E-30 6.7E-35 265.6 17.5 231 362-615 14-268 (290)
355 KOG0986 G protein-coupled rece 100.0 3.7E-31 8E-36 267.3 10.3 242 346-610 178-436 (591)
356 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.3E-30 2.8E-35 274.6 14.8 251 362-622 19-300 (337)
357 cd05123 STKc_AGC Catalytic dom 100.0 2.8E-30 6.1E-35 259.4 16.3 222 362-611 7-240 (250)
358 cd07866 STKc_BUR1 Catalytic do 100.0 3.4E-30 7.3E-35 267.7 17.3 249 362-615 22-308 (311)
359 PTZ00024 cyclin-dependent prot 100.0 4.6E-30 1E-34 270.1 18.2 245 362-615 23-313 (335)
360 KOG4250 TANK binding protein k 100.0 6.3E-31 1.4E-35 279.9 11.4 253 362-623 27-314 (732)
361 PHA03210 serine/threonine kina 100.0 2.1E-30 4.4E-35 286.6 15.6 227 383-615 210-454 (501)
362 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.3E-30 5.1E-35 273.5 15.3 265 342-623 7-306 (345)
363 cd07829 STKc_CDK_like Catalyti 100.0 5.3E-30 1.2E-34 262.2 17.4 243 362-615 13-279 (282)
364 KOG0690 Serine/threonine prote 100.0 1.1E-30 2.5E-35 253.5 11.2 239 362-628 182-434 (516)
365 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.5E-30 3.3E-35 274.6 12.9 246 362-615 19-300 (342)
366 cd08222 STKc_Nek11 Catalytic d 100.0 3.4E-30 7.3E-35 260.8 14.8 228 362-615 14-257 (260)
367 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.1E-30 8.8E-35 271.5 15.9 250 351-615 14-298 (343)
368 KOG0200 Fibroblast/platelet-de 100.0 7.8E-30 1.7E-34 286.5 19.0 238 362-621 310-581 (609)
369 PHA02882 putative serine/threo 100.0 1.1E-29 2.5E-34 262.2 17.7 237 362-616 26-293 (294)
370 KOG1027 Serine/threonine prote 100.0 6.1E-31 1.3E-35 283.6 6.4 232 361-615 523-767 (903)
371 cd07851 STKc_p38 Catalytic dom 100.0 3.9E-30 8.5E-35 271.6 12.1 249 352-615 15-298 (343)
372 smart00220 S_TKc Serine/Threon 100.0 1.6E-29 3.4E-34 251.5 15.6 227 362-614 3-240 (244)
373 cd07857 STKc_MPK1 Catalytic do 100.0 2.8E-29 6E-34 263.9 16.7 245 362-615 14-292 (332)
374 KOG0603 Ribosomal protein S6 k 100.0 8.1E-30 1.8E-34 269.5 12.4 221 362-615 336-563 (612)
375 KOG0607 MAP kinase-interacting 100.0 1.3E-29 2.7E-34 245.9 11.7 258 342-614 73-360 (463)
376 cd05610 STKc_MASTL Catalytic d 100.0 5E-29 1.1E-33 284.1 17.6 123 362-489 18-152 (669)
377 KOG1035 eIF-2alpha kinase GCN2 100.0 1.6E-29 3.5E-34 281.9 11.5 181 411-615 671-871 (1351)
378 KOG0662 Cyclin-dependent kinas 100.0 7E-29 1.5E-33 222.5 12.4 246 362-615 16-283 (292)
379 KOG0587 Traf2- and Nck-interac 100.0 8.9E-29 1.9E-33 268.2 15.4 231 362-615 33-282 (953)
380 KOG0671 LAMMER dual specificit 100.0 1.9E-29 4.2E-34 251.0 9.0 244 362-615 103-406 (415)
381 KOG0612 Rho-associated, coiled 100.0 1.3E-29 2.8E-34 280.4 7.0 255 345-628 68-348 (1317)
382 KOG4236 Serine/threonine prote 100.0 3.2E-29 6.9E-34 256.6 8.1 237 362-626 578-828 (888)
383 PLN03225 Serine/threonine-prot 100.0 1.1E-28 2.4E-33 274.6 12.2 255 350-615 130-450 (566)
384 KOG0696 Serine/threonine prote 100.0 1.8E-28 3.9E-33 244.7 9.9 228 353-608 350-594 (683)
385 KOG1151 Tousled-like protein k 100.0 1.8E-28 3.9E-33 246.5 9.6 236 362-614 477-740 (775)
386 KOG1006 Mitogen-activated prot 100.0 1.6E-29 3.6E-34 239.7 1.7 233 362-615 78-327 (361)
387 KOG0669 Cyclin T-dependent kin 99.9 6.1E-29 1.3E-33 234.0 2.9 250 362-616 31-316 (376)
388 KOG0614 cGMP-dependent protein 99.9 9.4E-29 2E-33 252.6 4.0 237 362-628 434-687 (732)
389 PLN03224 probable serine/threo 99.9 7.6E-27 1.6E-31 253.8 17.7 253 351-615 144-500 (507)
390 KOG0695 Serine/threonine prote 99.9 7.6E-27 1.6E-31 227.6 10.5 253 352-628 250-526 (593)
391 KOG1290 Serine/threonine prote 99.9 4.3E-26 9.4E-31 232.9 15.2 110 362-474 92-221 (590)
392 KOG0668 Casein kinase II, alph 99.9 7.6E-27 1.7E-31 217.1 8.5 237 362-615 52-322 (338)
393 cd00180 PKc Catalytic domain o 99.9 1.3E-25 2.8E-30 217.6 17.4 197 362-616 7-215 (215)
394 KOG0670 U4/U6-associated splic 99.9 1.1E-26 2.5E-31 238.0 7.7 245 362-615 446-746 (752)
395 KOG0665 Jun-N-terminal kinase 99.9 1.1E-26 2.3E-31 226.4 7.1 232 370-615 40-310 (369)
396 KOG0984 Mitogen-activated prot 99.9 2.4E-26 5.1E-31 210.9 8.3 187 363-556 63-264 (282)
397 KOG0608 Warts/lats-like serine 99.9 8.6E-26 1.9E-30 236.0 12.8 199 343-546 617-873 (1034)
398 smart00750 KIND kinase non-cat 99.9 4.7E-25 1E-29 209.6 13.0 171 421-623 1-173 (176)
399 KOG0664 Nemo-like MAPK-related 99.9 5.6E-26 1.2E-30 216.1 2.7 246 362-617 67-345 (449)
400 KOG1152 Signal transduction se 99.9 6.8E-25 1.5E-29 227.8 10.3 173 362-544 575-769 (772)
401 PLN00181 protein SPA1-RELATED; 99.9 4.4E-25 9.4E-30 257.6 9.8 201 389-615 25-265 (793)
402 PRK06347 autolysin; Reviewed 99.9 2.7E-24 5.7E-29 234.3 15.1 166 59-231 405-592 (592)
403 KOG0576 Mitogen-activated prot 99.9 3.3E-25 7.2E-30 233.7 5.1 230 362-614 29-270 (829)
404 PRK06347 autolysin; Reviewed 99.9 2.8E-23 6E-28 226.4 17.6 170 58-234 329-527 (592)
405 KOG1167 Serine/threonine prote 99.9 5.5E-24 1.2E-28 215.1 11.0 256 352-615 36-381 (418)
406 smart00221 STYKc Protein kinas 99.9 4.4E-23 9.5E-28 203.1 15.7 179 362-546 13-202 (225)
407 KOG1345 Serine/threonine kinas 99.9 2.4E-23 5.2E-28 198.4 10.5 232 362-617 38-286 (378)
408 KOG0195 Integrin-linked kinase 99.9 1E-22 2.2E-27 194.0 5.3 232 362-620 204-447 (448)
409 PRK10783 mltD membrane-bound l 99.8 1.4E-20 3.1E-25 201.7 15.9 165 60-234 264-450 (456)
410 KOG1164 Casein kinase (serine/ 99.8 5.5E-19 1.2E-23 184.6 18.8 243 362-623 32-301 (322)
411 PRK09188 serine/threonine prot 99.8 2.6E-19 5.6E-24 187.2 12.6 152 352-518 18-194 (365)
412 KOG1165 Casein kinase (serine/ 99.8 1.7E-18 3.6E-23 169.9 16.8 250 353-622 29-302 (449)
413 KOG1023 Natriuretic peptide re 99.8 1.9E-19 4.1E-24 191.4 10.3 219 390-623 1-228 (484)
414 COG0515 SPS1 Serine/threonine 99.8 1.1E-17 2.4E-22 172.8 20.3 241 362-615 14-275 (384)
415 KOG0590 Checkpoint kinase and 99.8 4.7E-20 1E-24 205.1 1.6 213 385-615 370-585 (601)
416 KOG1240 Protein kinase contain 99.7 7.8E-19 1.7E-23 195.0 5.8 230 363-618 38-294 (1431)
417 KOG4158 BRPK/PTEN-induced prot 99.7 9.6E-18 2.1E-22 168.0 9.9 186 410-620 317-515 (598)
418 KOG1163 Casein kinase (serine/ 99.7 2.4E-17 5.2E-22 155.2 10.8 238 362-620 29-285 (341)
419 KOG0603 Ribosomal protein S6 k 99.7 5.6E-18 1.2E-22 180.0 4.6 208 383-628 43-253 (612)
420 cd05147 RIO1_euk RIO kinase fa 99.7 6.9E-17 1.5E-21 155.2 11.0 123 362-492 11-168 (190)
421 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.3E-17 2.7E-22 174.2 3.1 175 410-612 330-509 (516)
422 PRK10359 lipopolysaccharide co 99.7 5.4E-17 1.2E-21 158.1 6.6 148 362-538 45-216 (232)
423 cd05145 RIO1_like RIO kinase f 99.7 3.8E-16 8.2E-21 150.4 12.3 122 362-492 11-168 (190)
424 KOG1166 Mitotic checkpoint ser 99.7 3.6E-16 7.7E-21 177.5 11.4 231 362-623 712-957 (974)
425 PRK12274 serine/threonine prot 99.6 6.4E-16 1.4E-20 147.4 10.4 168 362-545 16-208 (218)
426 PF14531 Kinase-like: Kinase-l 99.6 4E-16 8.7E-21 156.5 9.4 162 411-606 114-288 (288)
427 PRK14879 serine/threonine prot 99.6 7E-15 1.5E-19 144.0 9.4 119 362-490 10-143 (211)
428 PRK10345 hypothetical protein; 99.6 1.5E-14 3.3E-19 140.4 11.2 118 362-488 16-156 (210)
429 PRK10783 mltD membrane-bound l 99.5 1.8E-14 3.9E-19 154.8 10.8 105 59-168 343-449 (456)
430 smart00090 RIO RIO-like kinase 99.5 4.1E-14 8.9E-19 140.6 11.2 120 362-491 42-198 (237)
431 TIGR03724 arch_bud32 Kae1-asso 99.5 2.7E-14 5.9E-19 138.5 9.7 116 362-490 8-138 (199)
432 PRK09605 bifunctional UGMP fam 99.5 5.2E-14 1.1E-18 157.2 9.8 115 362-490 347-476 (535)
433 KOG1266 Protein kinase [Signal 99.5 1.8E-14 3.9E-19 141.7 5.1 207 387-616 118-332 (458)
434 cd05144 RIO2_C RIO kinase fami 99.5 1.8E-13 3.9E-18 132.7 11.8 116 362-492 29-176 (198)
435 PRK13914 invasion associated s 99.5 6.5E-13 1.4E-17 139.9 14.9 170 60-234 28-247 (481)
436 cd05120 APH_ChoK_like Aminogly 99.5 6.1E-13 1.3E-17 122.0 12.2 120 362-490 12-138 (155)
437 KOG0606 Microtubule-associated 99.5 6.8E-14 1.5E-18 156.2 6.6 160 448-627 153-324 (1205)
438 PRK01723 3-deoxy-D-manno-octul 99.4 8.1E-13 1.8E-17 131.6 11.0 120 362-491 46-192 (239)
439 KOG0590 Checkpoint kinase and 99.4 8.4E-14 1.8E-18 155.3 1.8 212 385-614 69-285 (601)
440 cd05119 RIO RIO kinase family, 99.3 1.2E-11 2.6E-16 118.6 10.2 119 362-492 11-165 (187)
441 TIGR01982 UbiB 2-polyprenylphe 99.2 4E-11 8.7E-16 129.8 12.6 77 409-492 231-308 (437)
442 cd05151 ChoK Choline Kinase (C 99.1 2.5E-10 5.4E-15 107.5 10.7 115 362-489 12-135 (170)
443 KOG0601 Cyclin-dependent kinas 99.1 5E-11 1.1E-15 127.5 6.3 229 362-615 130-379 (524)
444 KOG1243 Protein kinase [Genera 99.1 6.3E-10 1.4E-14 120.2 13.9 158 370-541 36-200 (690)
445 PF01476 LysM: LysM domain; I 99.1 5.9E-11 1.3E-15 84.9 3.1 43 187-231 1-44 (44)
446 COG1388 LytE FOG: LysM repeat 99.1 2.3E-10 5E-15 102.0 6.5 111 74-232 1-112 (124)
447 PRK04750 ubiB putative ubiquin 99.0 4.7E-10 1E-14 123.0 7.7 75 409-493 234-316 (537)
448 COG3642 Mn2+-dependent serine/ 98.9 6E-09 1.3E-13 96.3 9.8 117 362-491 10-141 (204)
449 cd05146 RIO3_euk RIO kinase fa 98.9 1.3E-08 2.7E-13 97.4 11.6 97 385-492 75-175 (197)
450 KOG3087 Serine/threonine prote 98.9 1.1E-08 2.4E-13 94.0 10.1 127 362-491 21-166 (229)
451 KOG3741 Poly(A) ribonuclease s 98.9 2.3E-08 4.9E-13 105.0 13.3 158 362-542 290-474 (655)
452 PRK15123 lipopolysaccharide co 98.9 1.5E-08 3.3E-13 102.2 11.7 125 362-489 36-193 (268)
453 KOG0601 Cyclin-dependent kinas 98.8 1.9E-09 4.1E-14 115.6 3.8 238 348-618 261-517 (524)
454 KOG0606 Microtubule-associated 98.8 1.8E-09 3.9E-14 121.4 3.4 211 395-628 863-1102(1205)
455 cd05154 ACAD10_11_like Acyl-Co 98.8 5.6E-08 1.2E-12 95.5 12.4 126 362-490 12-206 (223)
456 PF01476 LysM: LysM domain; I 98.8 5.6E-09 1.2E-13 74.6 3.5 43 62-106 1-44 (44)
457 KOG2137 Protein kinase [Signal 98.7 3.4E-09 7.5E-14 115.0 2.4 153 444-614 105-264 (700)
458 PRK14125 cell division suppres 98.7 1.2E-08 2.7E-13 86.2 4.9 50 184-235 36-93 (103)
459 PF01163 RIO1: RIO1 family; I 98.7 5.5E-08 1.2E-12 92.6 9.6 118 363-492 1-157 (188)
460 TIGR02899 spore_safA spore coa 98.6 2.5E-08 5.4E-13 71.1 3.7 42 189-231 1-43 (44)
461 PRK14125 cell division suppres 98.6 1.1E-07 2.5E-12 80.4 8.3 53 56-110 33-93 (103)
462 cd00118 LysM Lysin domain, fou 98.5 1.2E-07 2.5E-12 67.6 4.7 45 186-231 2-46 (46)
463 COG3858 Predicted glycosyl hyd 98.5 1.6E-07 3.5E-12 96.5 7.0 92 60-166 2-95 (423)
464 COG4248 Uncharacterized protei 98.5 2.1E-06 4.5E-11 88.4 13.9 201 411-622 85-303 (637)
465 COG0661 AarF Predicted unusual 98.5 1.4E-06 2.9E-11 95.4 12.6 167 321-493 83-317 (517)
466 TIGR02907 spore_VI_D stage VI 98.4 2.1E-07 4.5E-12 93.2 4.9 48 182-231 291-338 (338)
467 PRK10871 nlpD lipoprotein NlpD 98.4 3E-07 6.6E-12 93.2 5.1 48 186-234 62-109 (319)
468 COG3858 Predicted glycosyl hyd 98.4 4.2E-07 9.2E-12 93.4 6.0 96 121-235 3-99 (423)
469 PF06293 Kdo: Lipopolysacchari 98.3 2.5E-06 5.3E-11 83.2 10.2 104 383-491 58-171 (206)
470 TIGR02899 spore_safA spore coa 98.3 7E-07 1.5E-11 63.4 4.6 43 64-107 1-44 (44)
471 PRK09902 hypothetical protein; 98.3 7.1E-06 1.5E-10 78.8 12.0 125 362-490 32-179 (216)
472 KOG1235 Predicted unusual prot 98.2 1.4E-05 3.1E-10 87.2 12.8 162 324-493 122-357 (538)
473 cd00118 LysM Lysin domain, fou 98.2 2.7E-06 5.9E-11 60.3 4.9 45 61-106 2-46 (46)
474 smart00257 LysM Lysin motif. 98.2 2E-06 4.3E-11 60.3 4.1 44 186-230 1-44 (44)
475 COG0478 RIO-like serine/threon 98.1 1.2E-05 2.5E-10 79.2 9.7 116 362-491 105-252 (304)
476 PRK13914 invasion associated s 98.1 2.1E-06 4.6E-11 91.2 4.5 46 186-233 29-74 (481)
477 PRK10871 nlpD lipoprotein NlpD 98.1 7.4E-06 1.6E-10 83.3 7.4 48 60-108 61-108 (319)
478 TIGR02907 spore_VI_D stage VI 98.0 5.2E-06 1.1E-10 83.3 5.3 47 58-106 292-338 (338)
479 PF12260 PIP49_C: Protein-kina 98.0 1.8E-05 4E-10 75.6 8.2 104 385-492 8-113 (188)
480 cd05150 APH Aminoglycoside 3'- 98.0 5.5E-05 1.2E-09 75.7 12.0 128 362-489 13-192 (244)
481 PRK11198 LysM domain/BON super 97.9 7.6E-06 1.6E-10 74.7 4.1 45 186-231 97-146 (147)
482 PF06176 WaaY: Lipopolysacchar 97.9 4.4E-05 9.4E-10 73.7 9.1 114 362-489 45-182 (229)
483 TIGR02172 Fb_sc_TIGR02172 Fibr 97.9 0.00014 3.1E-09 71.8 11.7 125 362-489 15-181 (226)
484 PRK11198 LysM domain/BON super 97.7 6.3E-05 1.4E-09 68.7 6.3 47 120-166 96-146 (147)
485 smart00257 LysM Lysin motif. 97.7 6.6E-05 1.4E-09 52.3 4.6 43 62-105 2-44 (44)
486 COG1718 RIO1 Serine/threonine 97.7 0.00051 1.1E-08 67.2 11.7 121 362-492 62-217 (268)
487 KOG0576 Mitogen-activated prot 97.6 3.4E-05 7.3E-10 83.7 2.9 170 362-544 256-430 (829)
488 PF01636 APH: Phosphotransfera 97.5 0.00063 1.4E-08 67.0 9.9 128 362-489 11-196 (239)
489 COG1388 LytE FOG: LysM repeat 97.4 0.00018 3.9E-09 63.9 4.7 49 58-108 65-113 (124)
490 PLN02876 acyl-CoA dehydrogenas 97.3 0.0026 5.7E-08 75.0 13.3 62 362-423 52-131 (822)
491 KOG1035 eIF-2alpha kinase GCN2 97.2 0.00055 1.2E-08 79.3 7.0 195 385-617 231-436 (1351)
492 TIGR02721 ycfN_thiK thiamine k 97.1 0.004 8.7E-08 62.7 11.3 123 362-489 10-174 (256)
493 cd05157 ETNK_euk Ethanolamine 97.1 0.0066 1.4E-07 60.2 12.7 59 362-424 12-80 (235)
494 PRK10593 hypothetical protein; 97.1 0.0068 1.5E-07 62.5 12.5 62 362-423 28-100 (297)
495 cd05155 APH_ChoK_like_1 Unchar 97.0 0.0028 6E-08 63.0 9.0 30 460-489 164-193 (235)
496 COG2112 Predicted Ser/Thr prot 96.8 0.0061 1.3E-07 56.6 8.8 113 362-490 36-155 (201)
497 PF10707 YrbL-PhoP_reg: PhoP r 96.7 0.016 3.5E-07 55.7 10.9 94 384-487 59-169 (199)
498 cd05153 HomoserineK_II Homoser 96.7 0.021 4.5E-07 58.8 12.5 128 362-489 28-204 (296)
499 cd05156 ChoK_euk Choline Kinas 96.4 0.027 5.9E-07 58.2 11.5 60 362-425 12-86 (302)
500 PF13095 FTA2: Kinetochore Sim 96.3 0.023 5.1E-07 54.4 9.4 104 362-488 52-206 (207)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-50 Score=421.22 Aligned_cols=277 Identities=39% Similarity=0.761 Sum_probs=237.5
Q ss_pred ccccccHHHHHHhhcCCCCCCccc----ceEEEeeeC-CcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEE
Q 042486 338 SLKVYTFEELQAATDDFNPSCWIK----GSVYRGKIG-GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGIC 405 (635)
Q Consensus 338 ~~~~~~~~el~~at~~f~~~~~ig----g~Vy~g~~~-~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~ 405 (635)
..+.|+++||.+||++|+..+.|| |.||+|.+. +..||||++.. +|.+|+++|.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 457899999999999999999997 899999995 48999998743 477899999999999999999999
Q ss_pred ecCC-eeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEee
Q 042486 406 FNGG-NWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIAN 484 (635)
Q Consensus 406 ~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 484 (635)
.+.+ +.+||||||++|+|.++|.......++|..|++|+.++|+||+|||+...++|+||||||+|||||+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9988 599999999999999999765432699999999999999999999998878999999999999999999999999
Q ss_pred ecCcccccc-cCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCc-chhhHHHHhhhccc
Q 042486 485 FALARPAER-QEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYS-EENMLLVDVLNPVL 562 (635)
Q Consensus 485 fg~a~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~-~~~~~l~~~~~~~~ 562 (635)
||+++.... ... ..+. ..||.+|+|||+...+..+.|+|||||||+|+||+||+.+.+... .....+.+|..+.+
T Consensus 221 FGLa~~~~~~~~~--~~~~-~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 221 FGLAKLGPEGDTS--VSTT-VMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCcccCCccccc--eeee-cCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999976543 211 1111 179999999999999999999999999999999999998876533 23344677776555
Q ss_pred ccCCchhhhhhhcCCcCC-CCCCh-HHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042486 563 HKEDGEESLRHLMDPSMQ-GNYPP-VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621 (635)
Q Consensus 563 ~~~~~~~~l~~~~d~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 621 (635)
... .+.+++|+.+. ..++. .....+..++.+|++.+|++||+|.||++.|+.+..
T Consensus 298 ~~~----~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 298 EEG----KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HCc----chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 433 78889999987 66664 567779999999999999999999999999966554
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-43 Score=366.84 Aligned_cols=240 Identities=30% Similarity=0.495 Sum_probs=200.7
Q ss_pred ceEEEeeeCCcE-EEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCC-eeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKIGGDF-VAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGG-NWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~~~~~-vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|+||+|.+.|.. ||||++.. ++.+|+.+|++++|||||+++|+|.+.. ..++||||+++|+|.+++...
T Consensus 55 g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~ 134 (362)
T KOG0192|consen 55 GTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKK 134 (362)
T ss_pred eeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhc
Confidence 999999998888 99999975 6889999999999999999999999877 799999999999999999774
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC-cEEEeeecCcccccccCCceeeecccccCCC
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF-RAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
....+++..+++|+.|||.||.|||+.+ + ||||||||+|||++.++ .+||+|||+++...... .......||+.
T Consensus 135 ~~~~l~~~~~l~~aldiArGm~YLH~~~-~-iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---~~~~~~~GT~~ 209 (362)
T KOG0192|consen 135 RKRKLPLKVRLRIALDIARGMEYLHSEG-P-IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---TSMTSVAGTYR 209 (362)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCC-C-eeecccChhhEEEcCCCCEEEECCCccceeecccc---ccccCCCCCcc
Confidence 3455999999999999999999999954 3 99999999999999997 99999999998655422 11223689999
Q ss_pred ccCccccc--cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 510 YMAPEYLE--NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 510 y~aPE~~~--~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
|||||++. ...++.|+||||||+++|||+||+.||..... .. ....+.....+...+...
T Consensus 210 wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~-----------------~~~~v~~~~~Rp~~p~~~ 271 (362)
T KOG0192|consen 210 WMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQ-----------------VASAVVVGGLRPPIPKEC 271 (362)
T ss_pred ccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HH-----------------HHHHHHhcCCCCCCCccC
Confidence 99999999 56899999999999999999999999864333 11 111122222233344446
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcc
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~ 624 (635)
+..+..++.+||+.||+.||++.|++..|+.+.....
T Consensus 272 ~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 272 PPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 6679999999999999999999999999999876443
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-44 Score=353.64 Aligned_cols=232 Identities=26% Similarity=0.401 Sum_probs=195.5
Q ss_pred cceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCC-eeEEEeecccCCCcchhhcc
Q 042486 361 KGSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGG-NWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 361 gg~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lV~E~~~~gsL~~~l~~ 429 (635)
||+|||++. +++.+|+|.+.. ++.+|++++++.+||+||+++|.|.+++ ..+++||||++|+|++++..
T Consensus 92 gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~ 171 (364)
T KOG0581|consen 92 GGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKR 171 (364)
T ss_pred CcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhh
Confidence 499999988 799999999943 3568999999999999999999999988 59999999999999999976
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.+. +++...-+|+.+|++||.|||+ ..+||||||||+|||++..|++||+|||.+...... .....+||..
T Consensus 172 ~g~--i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-----~a~tfvGT~~ 242 (364)
T KOG0581|consen 172 VGR--IPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-----IANTFVGTSA 242 (364)
T ss_pred cCC--CCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-----hccccccccc
Confidence 533 8999999999999999999996 245999999999999999999999999999866443 3456799999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh-HHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP-VTA 588 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~-~~~ 588 (635)
|||||.+.+..|+.++||||||++++|+.+|+.|+....+.. .+..+.+..+.+.... ..|. .++
T Consensus 243 YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~-------------~~~~~Ll~~Iv~~ppP-~lP~~~fS 308 (364)
T KOG0581|consen 243 YMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY-------------LDIFELLCAIVDEPPP-RLPEGEFS 308 (364)
T ss_pred ccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC-------------CCHHHHHHHHhcCCCC-CCCcccCC
Confidence 999999999999999999999999999999999976431111 1223444445542221 2333 367
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.++++++..||+.||.+||+++|+++|
T Consensus 309 ~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 309 PEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 779999999999999999999999987
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-42 Score=354.17 Aligned_cols=238 Identities=29% Similarity=0.522 Sum_probs=201.2
Q ss_pred ceEEEeeeCCc-EEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKIGGD-FVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~~~~-~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||.|.+++. .||+|.++. +|.+|+++|++|+|+|||+++|+|..++..|||||||+.|+|.+||+...+..
T Consensus 220 G~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~ 299 (468)
T KOG0197|consen 220 GEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGL 299 (468)
T ss_pred ceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCc
Confidence 99999999776 999998875 46789999999999999999999999889999999999999999998766666
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+...+.+.++.|||+|++||++.+ +|||||..+||||+++..+||+|||+|+..... .........-...|.|||
T Consensus 300 l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~--~Y~~~~~~kfPIkWtAPE 374 (468)
T KOG0197|consen 300 LNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDD--EYTASEGGKFPIKWTAPE 374 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCC--ceeecCCCCCCceecCHH
Confidence 999999999999999999999854 999999999999999999999999999944332 222333334556899999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
.+..+.++.|||||||||+||||+| |+.|+..... ..+-+.++...+-..|..++..+.+
T Consensus 375 a~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-------------------~ev~~~le~GyRlp~P~~CP~~vY~ 435 (468)
T KOG0197|consen 375 ALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-------------------EEVLELLERGYRLPRPEGCPDEVYE 435 (468)
T ss_pred HHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH-------------------HHHHHHHhccCcCCCCCCCCHHHHH
Confidence 9999999999999999999999999 5555432221 1122233444455677788888999
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
++..||+.+|++|||++.+...|+++...+
T Consensus 436 lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 436 LMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred HHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 999999999999999999999999887654
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.6e-41 Score=349.92 Aligned_cols=226 Identities=25% Similarity=0.430 Sum_probs=193.4
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
.++|+++. +|+.||+|.+.+ .+.+|+++.++|+|||||+++++|++.++.|||.|+|.+++|.+++++
T Consensus 32 A~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Kr 111 (592)
T KOG0575|consen 32 ARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKR 111 (592)
T ss_pred eEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHh
Confidence 58999998 799999998854 356899999999999999999999999999999999999999999974
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
+ +.+++.++..++.||+.||.|||+.+ |+|||||..|+||+++.++||+|||+|........ .....+||+.
T Consensus 112 r--k~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E---rk~TlCGTPN 183 (592)
T KOG0575|consen 112 R--KPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE---RKKTLCGTPN 183 (592)
T ss_pred c--CCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCccc---ccceecCCCc
Confidence 3 45999999999999999999999965 99999999999999999999999999998765432 2345799999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.....+..+||||+||+||-|+.|++||.... ..+.+..+.... ...|...+.
T Consensus 184 YIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~------------------vkety~~Ik~~~--Y~~P~~ls~ 243 (592)
T KOG0575|consen 184 YIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT------------------VKETYNKIKLNE--YSMPSHLSA 243 (592)
T ss_pred ccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch------------------HHHHHHHHHhcC--cccccccCH
Confidence 999999999899999999999999999999999985321 122222222111 123445666
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+||.++|+.||.+|||+++|+.+
T Consensus 244 ~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 244 EAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 68999999999999999999999987
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=332.37 Aligned_cols=190 Identities=31% Similarity=0.467 Sum_probs=166.0
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEee
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYE 416 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 416 (635)
++|....+|| |.||+|+. ++..||||.+... ...|+.+|++++|||||++++++..++..|||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 3444444455 89999998 6789999988543 3579999999999999999999999999999999
Q ss_pred cccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC------CcEEEeeecCccc
Q 042486 417 NAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD------FRAKIANFALARP 490 (635)
Q Consensus 417 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~------~~~kl~Dfg~a~~ 490 (635)
||.||+|.+|++..+. +++.....++.|||.||++||+ ++||||||||+||||+.. -.+||+|||+|+.
T Consensus 90 yC~gGDLs~yi~~~~~--l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGR--LPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred eCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 9999999999987654 9999999999999999999998 459999999999999764 5689999999998
Q ss_pred ccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcch
Q 042486 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE 550 (635)
Q Consensus 491 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~ 550 (635)
.... ......+|++.|||||++...+|+.|+|+||+|+++|+|++|+.||......
T Consensus 165 L~~~----~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~ 220 (429)
T KOG0595|consen 165 LQPG----SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK 220 (429)
T ss_pred CCch----hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence 7643 2345679999999999999999999999999999999999999998754443
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.8e-41 Score=335.91 Aligned_cols=228 Identities=26% Similarity=0.345 Sum_probs=184.9
Q ss_pred ceEEEeee--CCcEEEEEEecc--------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
|.|-+|.. +++.||||.+.. ++.+|+++|++++|||||++++++...+..||||||++||.|.+
T Consensus 186 g~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd 265 (475)
T KOG0615|consen 186 GLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFD 265 (475)
T ss_pred eEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHH
Confidence 67888765 899999998854 24589999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC---CcEEEeeecCcccccccCCceeeec
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD---FRAKIANFALARPAERQEGEFALTS 502 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~ 502 (635)
.+-.++. +.+..-..+++|++.|+.|||+.| |+||||||+|||++.+ ..+||+|||+|+..+.. ..+.
T Consensus 266 ~vv~nk~--l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~----sfm~ 336 (475)
T KOG0615|consen 266 KVVANKY--LREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG----SFMK 336 (475)
T ss_pred HHHhccc--cccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccchhhccccc----eehh
Confidence 9965543 788888899999999999999955 9999999999999655 78999999999977532 4567
Q ss_pred ccccCCCccCccccccCCC---CcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcC
Q 042486 503 HIVGTKGYMAPEYLENGLV---STKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSM 579 (635)
Q Consensus 503 ~~~gt~~y~aPE~~~~~~~---s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~ 579 (635)
..+||+.|.|||++.+..+ ..+.|+||+||+||-+++|.+||.....+. .+.+. +...+.
T Consensus 337 TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-sl~eQ----------------I~~G~y 399 (475)
T KOG0615|consen 337 TLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-SLKEQ----------------ILKGRY 399 (475)
T ss_pred hhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-cHHHH----------------HhcCcc
Confidence 7899999999999976442 347899999999999999999986322111 01111 111111
Q ss_pred --CCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 580 --QGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 580 --~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
........+.+..+||.+||..||++|||++|+++|
T Consensus 400 ~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 400 AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 112234456778999999999999999999999987
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-41 Score=321.26 Aligned_cols=235 Identities=25% Similarity=0.362 Sum_probs=189.0
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEE-EEecCCe-eEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLG-ICFNGGN-WYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~-~~~~~~~-~~lV~E~~~~gsL~~~l~ 428 (635)
|+|||+.. +|..||.|++.- +...|+.+|++|+|||||++++ .+.++++ .+||||||..|+|...++
T Consensus 33 g~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk 112 (375)
T KOG0591|consen 33 GEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIK 112 (375)
T ss_pred hheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHH
Confidence 89999986 899999998852 3457999999999999999999 4445555 799999999999999984
Q ss_pred c--cCCCCCCHHHHHHHHHHHHhhhcccccCCC-CCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 429 D--KGGKFLDWAQRIQIALDVATGLNYLHSFTN-PPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 429 ~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~-~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
. ...+.++++.+++++.|++.||.++|..-. ..|+||||||.||+|+.+|.+||+|||+++...... ......+
T Consensus 113 ~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~---tfA~S~V 189 (375)
T KOG0591|consen 113 HFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT---TFAHSLV 189 (375)
T ss_pred HHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh---HHHHhhc
Confidence 3 345569999999999999999999998441 238999999999999999999999999999876543 3345679
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC-
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP- 584 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~- 584 (635)
|||.||+||.+....|++|+||||+||++|||..-+.||... .+...... +-.... ...|
T Consensus 190 GTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~K-------------I~qgd~-~~~p~ 250 (375)
T KOG0591|consen 190 GTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKK-------------IEQGDY-PPLPD 250 (375)
T ss_pred CCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHH-------------HHcCCC-CCCcH
Confidence 999999999999999999999999999999999999998643 11111111 111111 1233
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 585 PVTAILVIRLIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 585 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
..++..+..||..|+..||+.||+.-.++..+..
T Consensus 251 ~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 251 EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 5678889999999999999999996555544443
No 9
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.1e-40 Score=357.74 Aligned_cols=240 Identities=27% Similarity=0.482 Sum_probs=200.7
Q ss_pred ceEEEeeeC-------CcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIG-------GDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~-------~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|+.. ...||||.+++ ||.+|+++|.+++|||||+|+|+|.+++..+||+|||..|+|.++
T Consensus 500 GkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eF 579 (774)
T KOG1026|consen 500 GKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEF 579 (774)
T ss_pred hhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHH
Confidence 999999872 35799999875 578999999999999999999999999999999999999999999
Q ss_pred hcccC--------CC----CCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 427 INDKG--------GK----FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 427 l~~~~--------~~----~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
|.... +. +|+..+.+.|+.|||.|+.||-++. +|||||..+|+||.++..+||+|||+++..-..
T Consensus 580 Lra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~VKIsDfGLsRdiYss 656 (774)
T KOG1026|consen 580 LRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVVKISDFGLSRDIYSS 656 (774)
T ss_pred HHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEEEecccccchhhhhh
Confidence 95321 22 3889999999999999999999866 999999999999999999999999999865443
Q ss_pred CCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhh
Q 042486 495 EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573 (635)
Q Consensus 495 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 573 (635)
+.. .......-..+|||||.+..+++|.+||||||||+|||+++ |+.|+....++ +.+..
T Consensus 657 DYY-k~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~------------------EVIe~ 717 (774)
T KOG1026|consen 657 DYY-KVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ------------------EVIEC 717 (774)
T ss_pred hhh-cccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH------------------HHHHH
Confidence 311 11112334568999999999999999999999999999998 67776544333 33333
Q ss_pred hcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcc
Q 042486 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624 (635)
Q Consensus 574 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~ 624 (635)
+.+..+ -..|..++.++.+|+..||+.+|++||+++||-..|+++...+.
T Consensus 718 i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 718 IRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred HHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 444444 56788888889999999999999999999999999999987653
No 10
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5e-40 Score=338.25 Aligned_cols=245 Identities=26% Similarity=0.442 Sum_probs=204.0
Q ss_pred ccccHHHHHHhhcCCCCCCccc----ceEEEeeeCCcEEEEEEeccChHHHHHHHhhhccCCcccEEEEEecCCeeEEEe
Q 042486 340 KVYTFEELQAATDDFNPSCWIK----GSVYRGKIGGDFVAIKKVYGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVY 415 (635)
Q Consensus 340 ~~~~~~el~~at~~f~~~~~ig----g~Vy~g~~~~~~vavK~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 415 (635)
..+.|++|.+. .|+| |.||.|++.++.||||++++--..+|+-|++|+|+||+.+.|+|....-+||||
T Consensus 119 WeiPFe~IsEL-------eWlGSGaQGAVF~Grl~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiM 191 (904)
T KOG4721|consen 119 WEIPFEEISEL-------EWLGSGAQGAVFLGRLHNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIM 191 (904)
T ss_pred ccCCHHHhhhh-------hhhccCcccceeeeeccCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEee
Confidence 44566666543 2444 899999999999999999988888999999999999999999999999999999
Q ss_pred ecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccC
Q 042486 416 ENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQE 495 (635)
Q Consensus 416 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 495 (635)
|||..|-|.+.|+... .+.......|.++||.|+.|||.+. |||||||+-||||..+..+||+|||-++......
T Consensus 192 EfCa~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S 266 (904)
T KOG4721|consen 192 EFCAQGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDKS 266 (904)
T ss_pred eccccccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhhh
Confidence 9999999999996543 3888899999999999999999965 9999999999999999999999999988654432
Q ss_pred CceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhc
Q 042486 496 GEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLM 575 (635)
Q Consensus 496 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 575 (635)
..-.+.||..|||||++.+...++|.||||||||||||+||..|+..-+. ...+.. +-
T Consensus 267 ----TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds-----sAIIwG-------------VG 324 (904)
T KOG4721|consen 267 ----TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS-----SAIIWG-------------VG 324 (904)
T ss_pred ----hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch-----heeEEe-------------cc
Confidence 22347899999999999999999999999999999999999998642111 011111 11
Q ss_pred CCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 576 DPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 576 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
...+.-..|..++..+.-|++.||+..|..||++.+|+.||.-
T Consensus 325 sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 325 SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 1223334566777779999999999999999999999999973
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.6e-39 Score=311.36 Aligned_cols=245 Identities=22% Similarity=0.368 Sum_probs=187.4
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.|||++. +|+.||||++.+. ..+|+++|++++|+|+|.|+.+|.....++||+||++..-|.+ |...
T Consensus 16 GvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~e-Le~~ 94 (396)
T KOG0593|consen 16 GVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHE-LERY 94 (396)
T ss_pred eEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHHH-HHhc
Confidence 89999987 8999999999652 4589999999999999999999999999999999998755544 4332
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
. ..++.+.+.+++.|++.|+.|+|+++ ++||||||+||||+.++.+||||||+|+...... ...+..+.|.+|
T Consensus 95 p-~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg---d~YTDYVATRWY 167 (396)
T KOG0593|consen 95 P-NGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAPG---DNYTDYVATRWY 167 (396)
T ss_pred c-CCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCCc---chhhhhhhhhhc
Confidence 2 23899999999999999999999955 9999999999999999999999999999876432 223456899999
Q ss_pred cCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHH--HHhhhcccccC----CchhhhhhhcCCcCC---
Q 042486 511 MAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL--VDVLNPVLHKE----DGEESLRHLMDPSMQ--- 580 (635)
Q Consensus 511 ~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l--~~~~~~~~~~~----~~~~~l~~~~d~~~~--- 580 (635)
+|||.+.+ .+|....||||+||++.||++|.+.|...++-++.. ...+..+...- .....+..+.-|...
T Consensus 168 RaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~e 247 (396)
T KOG0593|consen 168 RAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPE 247 (396)
T ss_pred cChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCcc
Confidence 99999887 789999999999999999999998887665543221 11111111000 000111111111111
Q ss_pred ---CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 581 ---GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 581 ---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+ +..+..+.++++.||+.||.+|++.+|++.|
T Consensus 248 pLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 248 PLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred chhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 112 2234468999999999999999999999865
No 12
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-39 Score=332.80 Aligned_cols=227 Identities=23% Similarity=0.381 Sum_probs=191.4
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||.++. +++.||||++.- -+.+|+.+|+..+|+|||++++.|..+++++.||||+++|+|.+.+....
T Consensus 287 G~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~- 365 (550)
T KOG0578|consen 287 GGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTR- 365 (550)
T ss_pred cceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhccc-
Confidence 89999987 788999999842 25689999999999999999999999999999999999999999996543
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
+++.++..|+.+++.||+|||..+ |+|||||.+|||++.+|.+||+|||++........ .....+||+.|||
T Consensus 366 --~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~---KR~TmVGTPYWMA 437 (550)
T KOG0578|consen 366 --MTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS---KRSTMVGTPYWMA 437 (550)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC---ccccccCCCCccc
Confidence 899999999999999999999855 99999999999999999999999999987665432 3456899999999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcC-CcCCCCCChHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD-PSMQGNYPPVTAILV 591 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d-~~~~~~~~~~~~~~l 591 (635)
||+.....|++|.||||||++++||+.|.+|+.....- ..+..+.+ ....-..+...+..+
T Consensus 438 PEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl------------------rAlyLIa~ng~P~lk~~~klS~~~ 499 (550)
T KOG0578|consen 438 PEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL------------------RALYLIATNGTPKLKNPEKLSPEL 499 (550)
T ss_pred hhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH------------------HHHHHHhhcCCCCcCCccccCHHH
Confidence 99999999999999999999999999999987531111 11111111 111223355567779
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+++.+||+.|+++|+++.|+|+|
T Consensus 500 kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 500 KDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHHHHHHhhcchhcCCCHHHHhcC
Confidence 999999999999999999999986
No 13
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=324.72 Aligned_cols=237 Identities=30% Similarity=0.444 Sum_probs=191.1
Q ss_pred ceEEEeee--CCcEEEEEEeccC-------hHHHHHHHhhhccCCcccEEEEEecCC--eeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD-------ASDQIKLLNKINHSSLIRLLGICFNGG--NWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~-------~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|+||.+.. +|+..|||.+... +.+|+.+|++++|||||+++|...... .+++.|||+++|+|.+++.+.
T Consensus 31 G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~ 110 (313)
T KOG0198|consen 31 GSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRY 110 (313)
T ss_pred eEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHc
Confidence 99999998 4799999998665 689999999999999999999855444 689999999999999999877
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC-CCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-DFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
++ .+++..+..++.|+++||.|||+.+ |+||||||+|||++. ++.+||+|||++.................||+.
T Consensus 111 g~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~ 186 (313)
T KOG0198|consen 111 GG-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPN 186 (313)
T ss_pred CC-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCcc
Confidence 65 5999999999999999999999854 999999999999999 799999999999866531111223445789999
Q ss_pred ccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 510 y~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
|||||++.++ ...+++|||||||++.||+||+.||....+.. ...+...... .....|...+
T Consensus 187 ~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~----------------~~~~~ig~~~-~~P~ip~~ls 249 (313)
T KOG0198|consen 187 YMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEA----------------EALLLIGRED-SLPEIPDSLS 249 (313)
T ss_pred ccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchH----------------HHHHHHhccC-CCCCCCcccC
Confidence 9999999964 34469999999999999999999986420000 0111111111 1124566677
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
....+++..|+..||++|||++|++++--.-
T Consensus 250 ~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 250 DEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred HHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 7789999999999999999999999986543
No 14
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=6.1e-38 Score=322.07 Aligned_cols=232 Identities=19% Similarity=0.351 Sum_probs=187.6
Q ss_pred ceEEEeeeCCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEec----CCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKIGGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFN----GGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|+++|+.||||+++. .+.+|+.+|++++||||++++|++.+ ....++||||+++|+|.+++
T Consensus 34 ~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l 113 (283)
T PHA02988 34 NSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVL 113 (283)
T ss_pred eEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHH
Confidence 78999999999999998864 23489999999999999999999876 34679999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.... .+++.....++.+++.||.|||+. .+++||||||+||++++++.+||+|||+++...... ....++
T Consensus 114 ~~~~--~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~ 183 (283)
T PHA02988 114 DKEK--DLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP------FKNVNF 183 (283)
T ss_pred hhCC--CCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc------ccccCc
Confidence 6543 489999999999999999999973 248899999999999999999999999987543221 124678
Q ss_pred CCccCcccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 508 KGYMAPEYLEN--GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 508 ~~y~aPE~~~~--~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ... .+.........+.
T Consensus 184 ~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~--~~~----------------~i~~~~~~~~~~~ 245 (283)
T PHA02988 184 MVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE--IYD----------------LIINKNNSLKLPL 245 (283)
T ss_pred ccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH--HHH----------------HHHhcCCCCCCCC
Confidence 89999999976 678999999999999999999999986432211 111 1111111112233
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 621 (635)
..+..+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 246 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 246 DCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 345669999999999999999999999999997753
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=329.15 Aligned_cols=249 Identities=26% Similarity=0.358 Sum_probs=203.1
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEE
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLV 414 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV 414 (635)
++|..+..+| .+|++++. +++.+|||++.+. +..|-+.|.+| +||.|++|+-.|.++..+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 4444445555 68999987 7899999988543 44688899999 899999999999999999999
Q ss_pred eecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 415 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
+||+++|+|.+++.+.+. +++.-...++.+|+.||+|||+.| ||||||||+|||||+|+++||+|||.|+.+...
T Consensus 153 Le~A~nGdll~~i~K~Gs--fde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYGS--FDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEecCCCcHHHHHHHhCc--chHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 999999999999977654 899999999999999999999955 999999999999999999999999999876543
Q ss_pred CCc--------eee--ecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhccccc
Q 042486 495 EGE--------FAL--TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHK 564 (635)
Q Consensus 495 ~~~--------~~~--~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~ 564 (635)
... ... ...++||-.|.+||++..+..++.+|+|+|||+||+|+.|++||...++
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne--------------- 292 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE--------------- 292 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH---------------
Confidence 211 011 1448999999999999999999999999999999999999999854322
Q ss_pred CCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcccccc
Q 042486 565 EDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 565 ~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w~~ 628 (635)
-..++++++- ...+|+..+....+|+++.|..||.+|++.+||.+| -+-+.++|+.
T Consensus 293 ---yliFqkI~~l--~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H---pFF~~Vdw~n 348 (604)
T KOG0592|consen 293 ---YLIFQKIQAL--DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH---PFFEGVDWEN 348 (604)
T ss_pred ---HHHHHHHHHh--cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC---cccccCChhh
Confidence 1222333321 223455555668999999999999999999998887 3556688865
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=324.46 Aligned_cols=245 Identities=29% Similarity=0.397 Sum_probs=196.9
Q ss_pred ceEEEeee--CCcEEEEEEeccCh--------HHHHHHHhhhc-cCCcccEEEEEecCC-eeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGDA--------SDQIKLLNKIN-HSSLIRLLGICFNGG-NWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~~--------~~E~~~l~~l~-h~nIv~l~~~~~~~~-~~~lV~E~~~~gsL~~~l~~ 429 (635)
|+||+|+. ++..||||+++..+ .+|++.|++|+ ||||++|.+++.+.+ .+|+|||||+ .+|.+++++
T Consensus 24 GsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~ 102 (538)
T KOG0661|consen 24 GSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKD 102 (538)
T ss_pred eeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhh
Confidence 99999987 78899999998764 37999999998 999999999999887 8999999995 599999977
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
+ ++.+++..+..|+.||++||+|+|++| +.|||+||+|||+..+..+||+|||+||....... .+..+.|.+
T Consensus 103 R-~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP----YTeYVSTRW 174 (538)
T KOG0661|consen 103 R-NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRSKPP----YTEYVSTRW 174 (538)
T ss_pred c-CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccccCCC----cchhhhccc
Confidence 6 677999999999999999999999966 99999999999999999999999999997765432 234678999
Q ss_pred ccCccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhH--HHHhhhcccccCCch-hhhhhhcCCcCCCCCC-
Q 042486 510 YMAPEYLE-NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENML--LVDVLNPVLHKEDGE-ESLRHLMDPSMQGNYP- 584 (635)
Q Consensus 510 y~aPE~~~-~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~--l~~~~~~~~~~~~~~-~~l~~~~d~~~~~~~~- 584 (635)
|+|||++. .+.|+.+.|+||+||+++|+.+-++.|.+.++-++. +.+++...-...+.+ ..+...+.-.+....+
T Consensus 175 YRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~ 254 (538)
T KOG0661|consen 175 YRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPS 254 (538)
T ss_pred ccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCC
Confidence 99999875 688999999999999999999999888765554322 222222222222222 3444444433221111
Q ss_pred ------hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 585 ------PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 585 ------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+..+.+..++|.+|+..||.+|||+.|.+++
T Consensus 255 ~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 255 PLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred ChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 2256678999999999999999999999986
No 17
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-38 Score=317.41 Aligned_cols=241 Identities=25% Similarity=0.348 Sum_probs=195.3
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
++||+|+. .+..||||++.- .+.+|++.|+.++||||++++..|..+..+|+||.||.+|++.+.+...-
T Consensus 40 a~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~ 119 (516)
T KOG0582|consen 40 AVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYY 119 (516)
T ss_pred eEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHc
Confidence 78999988 689999999853 35689999999999999999999999999999999999999999997655
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeee-cccccCCCc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT-SHIVGTKGY 510 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~-~~~~gt~~y 510 (635)
...+++..+..|++++++||.|||+.| .||||||+.||||+++|.+||+|||.....-......... ...+||+.|
T Consensus 120 ~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~w 196 (516)
T KOG0582|consen 120 PDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCW 196 (516)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccc
Confidence 555999999999999999999999955 9999999999999999999999999887654432221222 567999999
Q ss_pred cCcccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 511 MAPEYLEN--GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 511 ~aPE~~~~--~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
||||++.. ..|+.|+||||||++..||.+|..||..+..-.+.+....+....... ..+..+......
T Consensus 197 mAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t----------~~~~~d~~k~~~ 266 (516)
T KOG0582|consen 197 MAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLT----------SGLDKDEDKKFS 266 (516)
T ss_pred cChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCccc----------ccCChHHhhhhc
Confidence 99999543 568999999999999999999999998776655555544443321110 001111112234
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+.+++..||+.||.+|||+++++++
T Consensus 267 ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 267 KSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 468999999999999999999999876
No 18
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=316.33 Aligned_cols=247 Identities=25% Similarity=0.366 Sum_probs=197.1
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEe
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVY 415 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 415 (635)
++|..-..|| |.||..+. +++.+|+|.+++. ..+|..+|.+++||.||++...|++.+.+|||+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl 104 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL 104 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence 3455555555 89998876 7899999988653 457999999999999999999999999999999
Q ss_pred ecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccC
Q 042486 416 ENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQE 495 (635)
Q Consensus 416 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 495 (635)
||+.||.|..+|++.+. +++..+.-++.+|+.||.|||+.+ ||||||||+|||||++|.++|+|||+++......
T Consensus 105 d~~~GGeLf~hL~~eg~--F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 105 DYLNGGELFYHLQREGR--FSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred eccCCccHHHHHHhcCC--cchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence 99999999999976554 888888889999999999999955 9999999999999999999999999998544332
Q ss_pred CceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhc
Q 042486 496 GEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLM 575 (635)
Q Consensus 496 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 575 (635)
..+..++||+.|||||++....++..+|.||||+++|||++|.+||...+.. +..+.+.
T Consensus 180 ---~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~------------------~~~~~I~ 238 (357)
T KOG0598|consen 180 ---DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK------------------KMYDKIL 238 (357)
T ss_pred ---CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH------------------HHHHHHh
Confidence 2355689999999999999999999999999999999999999998643321 1122222
Q ss_pred CCcCCCCCChHHHHHHHHHHHHhhhcCCCCCC----CHHHHHHHHHHHHhhcccccc
Q 042486 576 DPSMQGNYPPVTAILVIRLIESCLKKDPSGRP----AMDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 576 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP----s~~evl~~L~~~~~~s~~w~~ 628 (635)
.... ...+...+...+++++++|..||++|. .+.+|-+| -+-..++|+.
T Consensus 239 ~~k~-~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H---pfF~~inW~~ 291 (357)
T KOG0598|consen 239 KGKL-PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH---PFFKGINWEK 291 (357)
T ss_pred cCcC-CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC---cccccCCHHH
Confidence 2111 122333556689999999999999995 45554433 3445577764
No 19
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-39 Score=342.83 Aligned_cols=263 Identities=22% Similarity=0.396 Sum_probs=213.0
Q ss_pred ccccHHHHHHhhcCCCC---------CCccc----ceEEEeee--C---CcEEEEEEecc--------ChHHHHHHHhhh
Q 042486 340 KVYTFEELQAATDDFNP---------SCWIK----GSVYRGKI--G---GDFVAIKKVYG--------DASDQIKLLNKI 393 (635)
Q Consensus 340 ~~~~~~el~~at~~f~~---------~~~ig----g~Vy~g~~--~---~~~vavK~~~~--------~~~~E~~~l~~l 393 (635)
..++|||--+|..+|.. +..|| |.||+|++ . ...||||.++. +|..|..||.++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 34577777677666643 22344 89999998 3 34899998864 688899999999
Q ss_pred ccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEE
Q 042486 394 NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473 (635)
Q Consensus 394 ~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIl 473 (635)
.||||++|.|+........+|.|||+||+|+.+|+.+.++ +.+.+...+++.||.|++||.+++ +|||||..+|||
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNIL 763 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNIL 763 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhhee
Confidence 9999999999999999999999999999999999887766 899999999999999999999866 999999999999
Q ss_pred ECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhh
Q 042486 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENM 552 (635)
Q Consensus 474 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~ 552 (635)
++.+...|++|||+++..++.......+..-.-..+|.|||.+..++++.++||||||++|||.++ |..|+-..++
T Consensus 764 VNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--- 840 (996)
T KOG0196|consen 764 VNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--- 840 (996)
T ss_pred eccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch---
Confidence 999999999999999977655422222221222358999999999999999999999999999887 6666422111
Q ss_pred HHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhccc
Q 042486 553 LLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLA 625 (635)
Q Consensus 553 ~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~ 625 (635)
.+.+.. ++...+-..|.+++..|.+|+..||++|-.+||.+.+|+..|.+++.+.-+
T Consensus 841 ---------------QdVIka-Ie~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~S 897 (996)
T KOG0196|consen 841 ---------------QDVIKA-IEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNS 897 (996)
T ss_pred ---------------HHHHHH-HHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchh
Confidence 122222 222334456788899999999999999999999999999999999976544
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-37 Score=319.37 Aligned_cols=245 Identities=29% Similarity=0.340 Sum_probs=187.5
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecC--CeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNG--GNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.|||++. +|+.||+|+++-+ ..+||.+|++|+||||++|.+...+. +.+|||+|||+. +|.-++.
T Consensus 131 g~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~ 209 (560)
T KOG0600|consen 131 GQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLS 209 (560)
T ss_pred hheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhc
Confidence 89999998 7999999999643 35899999999999999999999876 689999999976 8888886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... -.+++.++..+++||+.||+|||+. +|+|||||.+|||||.+|.+||+|||+|++....... ..+..+-|.
T Consensus 210 ~p~-vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~--~~T~rVvTL 283 (560)
T KOG0600|consen 210 SPG-VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA--PYTSRVVTL 283 (560)
T ss_pred CCC-cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCCCCc--ccccceEEe
Confidence 543 3499999999999999999999995 4999999999999999999999999999977654422 234467899
Q ss_pred CccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccC----CchhhhhhhcCCcCCCCC
Q 042486 509 GYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE----DGEESLRHLMDPSMQGNY 583 (635)
Q Consensus 509 ~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~----~~~~~l~~~~d~~~~~~~ 583 (635)
+|+|||.+.+ ..|+.+.|+||.||||.||++|++.+....+-+ ..+.+..+.... +....+...........+
T Consensus 284 WYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve--Ql~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y 361 (560)
T KOG0600|consen 284 WYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE--QLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPY 361 (560)
T ss_pred eccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH--HHHHHHHHhCCCChhccccccCCcccccCCCCcc
Confidence 9999999886 579999999999999999999998776543322 111221111111 111111111111111112
Q ss_pred Ch-------HHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 584 PP-------VTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 584 ~~-------~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.. ..+....+|+..+|..||.+|.|+.+++++
T Consensus 362 ~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 362 KRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 21 123446889999999999999999998875
No 21
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.8e-36 Score=360.55 Aligned_cols=262 Identities=23% Similarity=0.433 Sum_probs=205.3
Q ss_pred ccHHHHHHhhcCCCCCCccc----ceEEEeee--CCcEEEEEEeccC---hHHHHHHHhhhccCCcccEEEEEecCCeeE
Q 042486 342 YTFEELQAATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGD---ASDQIKLLNKINHSSLIRLLGICFNGGNWY 412 (635)
Q Consensus 342 ~~~~el~~at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~---~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 412 (635)
++++++.. .+.....+| |.||+|+. ++..||||+++.. ..+|++.+++++||||++++|+|.+++..+
T Consensus 683 ~~~~~~~~---~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~ 759 (968)
T PLN00113 683 ITINDILS---SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAY 759 (968)
T ss_pred hhHHHHHh---hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCE
Confidence 44555543 344555555 89999986 7889999998642 356899999999999999999999999999
Q ss_pred EEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccc
Q 042486 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492 (635)
Q Consensus 413 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 492 (635)
+||||+++|+|.++++. ++|..+.+|+.|++.||+|||..+.++++||||||+||+++.++..++. ||......
T Consensus 760 lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~ 833 (968)
T PLN00113 760 LIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC 833 (968)
T ss_pred EEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc
Confidence 99999999999999953 8999999999999999999997655789999999999999999888875 66544321
Q ss_pred ccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhh
Q 042486 493 RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLR 572 (635)
Q Consensus 493 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~ 572 (635)
. .....++..|+|||++.+..++.++|||||||++|||+||+.|+...........+|....... ....
T Consensus 834 ~-------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~ 902 (968)
T PLN00113 834 T-------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD----CHLD 902 (968)
T ss_pred c-------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCc----cchh
Confidence 1 1123678999999999999999999999999999999999999854333333344443332221 1233
Q ss_pred hhcCCcCCCC--CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 573 HLMDPSMQGN--YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 573 ~~~d~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
.++|+.+... .+......+.+++.+||+.||++||+|+|+++.|+++...+
T Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 903 MWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred heeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 4556555332 33455667889999999999999999999999999997754
No 22
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-37 Score=325.34 Aligned_cols=226 Identities=28% Similarity=0.404 Sum_probs=190.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.|-.|+. +|+.+|||.+... +.+|+-+|+-++|||++++++++.+..++|+|.||+++|-|.+++-.
T Consensus 26 g~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~ 105 (786)
T KOG0588|consen 26 GCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVR 105 (786)
T ss_pred ceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHh
Confidence 67887876 8999999998654 56899999999999999999999999999999999999999999976
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
++. +++.+..++++||+.|+.|+|..+ |+|||+||+|+|||.++++||+|||+|...... ......+|.+.
T Consensus 106 kG~--l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g----klLeTSCGSPH 176 (786)
T KOG0588|consen 106 KGP--LPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG----KLLETSCGSPH 176 (786)
T ss_pred hCC--CCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCC----ccccccCCCcc
Confidence 654 899999999999999999999977 999999999999999999999999999754432 23455789999
Q ss_pred ccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 510 YMAPEYLENGLV-STKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 510 y~aPE~~~~~~~-s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
|.+||++.+..| ..++||||+|||||.|+||+.||+. +.-...+..+....+ +.|...+
T Consensus 177 YA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-dNir~LLlKV~~G~f-------------------~MPs~Is 236 (786)
T KOG0588|consen 177 YAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-DNIRVLLLKVQRGVF-------------------EMPSNIS 236 (786)
T ss_pred cCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-ccHHHHHHHHHcCcc-------------------cCCCcCC
Confidence 999999998776 6799999999999999999999862 111122222222221 2345556
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
.+..+|+.+|+..||++|.|++||++|-
T Consensus 237 ~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 237 SEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHHHHHHHHHhccCccccccHHHHhhCc
Confidence 6689999999999999999999999984
No 23
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=6.5e-37 Score=322.64 Aligned_cols=239 Identities=26% Similarity=0.421 Sum_probs=185.1
Q ss_pred ceEEEeee-------CCcEEEEEEecc--------ChHHHHHHHhhh-ccCCcccEEEEEecC-CeeEEEeecccCCCcc
Q 042486 362 GSVYRGKI-------GGDFVAIKKVYG--------DASDQIKLLNKI-NHSSLIRLLGICFNG-GNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~-------~~~~vavK~~~~--------~~~~E~~~l~~l-~h~nIv~l~~~~~~~-~~~~lV~E~~~~gsL~ 424 (635)
|.||+|.. +++.||||+++. .+.+|+.+|.++ +||||++++++|... +..++||||+++|+|.
T Consensus 21 g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~ 100 (338)
T cd05102 21 GKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLS 100 (338)
T ss_pred ceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHH
Confidence 89999974 346899999864 255799999999 899999999998764 4579999999999999
Q ss_pred hhhcccC------------------------------------------------------------CCCCCHHHHHHHH
Q 042486 425 VWINDKG------------------------------------------------------------GKFLDWAQRIQIA 444 (635)
Q Consensus 425 ~~l~~~~------------------------------------------------------------~~~l~~~~~~~i~ 444 (635)
+++.... ...+++..+..++
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (338)
T cd05102 101 NFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYS 180 (338)
T ss_pred HHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHH
Confidence 9985421 1247888999999
Q ss_pred HHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccccCCCCcc
Q 042486 445 LDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTK 524 (635)
Q Consensus 445 ~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 524 (635)
.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....... ........++..|+|||++.+..++.+
T Consensus 181 ~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~ 256 (338)
T cd05102 181 FQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGSARLPLKWMAPESIFDKVYTTQ 256 (338)
T ss_pred HHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcc-hhcccCCCCCccccCcHHhhcCCCCcc
Confidence 9999999999984 599999999999999999999999999976532211 111223346678999999998889999
Q ss_pred cchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCC
Q 042486 525 LDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDP 603 (635)
Q Consensus 525 sDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP 603 (635)
+||||||+++|||++ |..||........ .... +.+.. ....+...+..+.+++.+||+.||
T Consensus 257 sDiwslG~il~el~~~g~~pf~~~~~~~~-~~~~----------------~~~~~-~~~~~~~~~~~l~~li~~cl~~dp 318 (338)
T cd05102 257 SDVWSFGVLLWEIFSLGASPYPGVQINEE-FCQR----------------LKDGT-RMRAPENATPEIYRIMLACWQGDP 318 (338)
T ss_pred cCHHHHHHHHHHHHhCCCCCCCCCCccHH-HHHH----------------HhcCC-CCCCCCCCCHHHHHHHHHHccCCh
Confidence 999999999999997 8888754222111 1110 00000 011123344568999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhh
Q 042486 604 SGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 604 ~~RPs~~evl~~L~~~~~~ 622 (635)
++||++.|+++.|++++.+
T Consensus 319 ~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 319 KERPTFSALVEILGDLLQE 337 (338)
T ss_pred hhCcCHHHHHHHHHHHHhc
Confidence 9999999999999998764
No 24
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-37 Score=310.73 Aligned_cols=255 Identities=25% Similarity=0.423 Sum_probs=188.5
Q ss_pred ceEEEeeeCCcEEEEEEecc----ChHHHHHHHh--hhccCCcccEEEEEecCC----eeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKIGGDFVAIKKVYG----DASDQIKLLN--KINHSSLIRLLGICFNGG----NWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~----~~~~E~~~l~--~l~h~nIv~l~~~~~~~~----~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||||+++++.||||++.. .+.+|-++.+ .++|+||+++++.-.... +++||+||.++|+|.+||..+.
T Consensus 224 g~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~nt 303 (534)
T KOG3653|consen 224 GCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKANT 303 (534)
T ss_pred ceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhcc
Confidence 99999999999999999954 4566766665 468999999999877555 7899999999999999997654
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCC------CCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFT------NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~------~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++|....+|+..+++||+|||+.. +++|+|||||++||||..|++..|+|||+|......... ..+...+
T Consensus 304 ---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~-~d~~~qV 379 (534)
T KOG3653|consen 304 ---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQ-GDTHGQV 379 (534)
T ss_pred ---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCC-cchhhhh
Confidence 899999999999999999999743 467999999999999999999999999999877644322 1223378
Q ss_pred cCCCccCccccccCC------CCcccchhhHHHHHHHHHhCCCCCCC-CcchhhH-HHHhhhcccccCCchhhhhh-hcC
Q 042486 506 GTKGYMAPEYLENGL------VSTKLDVYAFGVLMLEMLSGKEAPAL-YSEENML-LVDVLNPVLHKEDGEESLRH-LMD 576 (635)
Q Consensus 506 gt~~y~aPE~~~~~~------~s~ksDV~SlGvvl~elltG~~p~~~-~~~~~~~-l~~~~~~~~~~~~~~~~l~~-~~d 576 (635)
||.+|||||++.+.. .-.+.||||+|.+||||++....... .-.+.+. +...+.. ....+.+++ .+.
T Consensus 380 GT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~----hPt~e~mq~~VV~ 455 (534)
T KOG3653|consen 380 GTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN----HPTLEEMQELVVR 455 (534)
T ss_pred hhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC----CCCHHHHHHHHHh
Confidence 999999999997632 12368999999999999997654321 1111000 0000000 000111111 111
Q ss_pred CcCCCCCCh-----HHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcc
Q 042486 577 PSMQGNYPP-----VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624 (635)
Q Consensus 577 ~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~ 624 (635)
.+.+...+. .....+.+.++.||+.||+.|.|+.=+.+++..+....-
T Consensus 456 kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 456 KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 122222221 234558999999999999999999999999998875443
No 25
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-37 Score=321.78 Aligned_cols=239 Identities=28% Similarity=0.492 Sum_probs=192.0
Q ss_pred ceEEEeeeCCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKIGGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|+||+|+|.|+ ||||.++. .|.+|+..|++-+|.||+-++|+|..... .+|.-+|+|-+|..+++..+.
T Consensus 406 GtV~Rg~whGd-VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~et 483 (678)
T KOG0193|consen 406 GTVYRGRWHGD-VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQET 483 (678)
T ss_pred cceeecccccc-eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccchhh
Confidence 99999999886 89999964 37899999999999999999999987777 999999999999999976654
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
+ ++....+.|+.|+++|+.|||. ++|||||||+.|||+.+++.|||+|||++.......+. .......|...|||
T Consensus 484 k-fdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~-~q~~qp~gsilwmA 558 (678)
T KOG0193|consen 484 K-FDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGE-QQLEQPHGSLLWMA 558 (678)
T ss_pred h-hhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeeeeeccc-cccCCCccchhhhc
Confidence 4 8999999999999999999998 55999999999999999999999999999755433221 12233567788999
Q ss_pred cccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 513 PEYLEN---GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 513 PE~~~~---~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
||++.. ..|++.+||||||+++|||+||..|+. ....+..++..-...+ .+.+ ......++.
T Consensus 559 PEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGrG~l-------------~pd~-s~~~s~~pk 623 (678)
T KOG0193|consen 559 PEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYL-------------MPDL-SKIRSNCPK 623 (678)
T ss_pred HHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEeccccc-------------Cccc-hhhhccCHH
Confidence 999863 568999999999999999999999986 2222222211111110 1111 011234456
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhh
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 622 (635)
++.+|+..||..++++||.+.+|+..|+.++.+
T Consensus 624 ~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 624 AMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred HHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 699999999999999999999999999988863
No 26
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1e-36 Score=289.02 Aligned_cols=244 Identities=30% Similarity=0.361 Sum_probs=190.3
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+|+. +|+.||||+++- ...+|++.|+.++|+||+.+++.|.+.+...||+||++. +|+..+++.
T Consensus 16 gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vIkd~ 94 (318)
T KOG0659|consen 16 GVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVIKDK 94 (318)
T ss_pred EEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-cHHHHhccc
Confidence 89999998 799999999853 246899999999999999999999999999999999965 899998765
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
. ..++..++..++.++++||+|||+.. |+||||||.|+|++++|.+||+|||+++........ ..+.+.|.+|
T Consensus 95 ~-i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~---~~~~V~TRWY 167 (318)
T KOG0659|consen 95 N-IILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI---QTHQVVTRWY 167 (318)
T ss_pred c-cccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCCcc---cccceeeeec
Confidence 4 45999999999999999999999955 999999999999999999999999999987755432 2334789999
Q ss_pred cCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC--chhhhhhhcC-------CcC-
Q 042486 511 MAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED--GEESLRHLMD-------PSM- 579 (635)
Q Consensus 511 ~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~l~~~~d-------~~~- 579 (635)
+|||.+.+ ..|+...|+||.||++.||+-|.+.+...++-+ .+...+.. +.... ....+..+.| |..
T Consensus 168 RAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDid-QL~~If~~-LGTP~~~~WP~~~~lpdY~~~~~~P~~~ 245 (318)
T KOG0659|consen 168 RAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDID-QLSKIFRA-LGTPTPDQWPEMTSLPDYVKIQQFPKPP 245 (318)
T ss_pred cChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHH-HHHHHHHH-cCCCCcccCccccccccHHHHhcCCCCc
Confidence 99998875 679999999999999999999986665444332 22222221 11111 0111111111 111
Q ss_pred CCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 580 QGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 580 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
....-+..+....+|+.+|+..||.+|+++.|.+++
T Consensus 246 ~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 246 LNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111223345557999999999999999999999987
No 27
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.9e-37 Score=316.04 Aligned_cols=225 Identities=27% Similarity=0.425 Sum_probs=191.7
Q ss_pred ceEEEeee--CCcEEEEEEecc----C-----hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----D-----ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----~-----~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||||+. +.+.||+|.+.+ + +.+|++++++++||||+.++++|+...+.++|.||+.| +|..++...
T Consensus 16 g~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d 94 (808)
T KOG0597|consen 16 GRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQD 94 (808)
T ss_pred ceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhc
Confidence 89999986 778999998743 2 67899999999999999999999999999999999977 999999765
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
+. ++++.+..|+.+++.||.|||+.+ |.|||+||.|||++.++.+|++|||+|+...... .+.....||+.|
T Consensus 95 ~~--lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t---~vltsikGtPlY 166 (808)
T KOG0597|consen 95 GK--LPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT---SVLTSIKGTPLY 166 (808)
T ss_pred cC--CCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccCc---eeeeeccCcccc
Confidence 54 999999999999999999999955 9999999999999999999999999999776532 445668899999
Q ss_pred cCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHH
Q 042486 511 MAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590 (635)
Q Consensus 511 ~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~ 590 (635)
||||.+.+..|+..+|.||+||++||+++|++||...+ ...+. +.+... ...+|...+..
T Consensus 167 mAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s--i~~Lv----------------~~I~~d--~v~~p~~~S~~ 226 (808)
T KOG0597|consen 167 MAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS--ITQLV----------------KSILKD--PVKPPSTASSS 226 (808)
T ss_pred cCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH--HHHHH----------------HHHhcC--CCCCcccccHH
Confidence 99999999999999999999999999999999985311 11111 111111 12345567778
Q ss_pred HHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 591 VIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 591 l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+.+++...|..||.+|.+..+++.|
T Consensus 227 f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 227 FVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHHHHHHHhhcChhhcccHHHHhcC
Confidence 9999999999999999999998876
No 28
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-36 Score=316.29 Aligned_cols=231 Identities=28% Similarity=0.369 Sum_probs=189.2
Q ss_pred ceEEEeee--CCcEEEEEEeccC------------hHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD------------ASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~------------~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|+|+.|.. ++..||+|.+..+ +.+|+.++++++ ||||++++.++......|+||||+.+|+|.++
T Consensus 31 gkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~ 110 (370)
T KOG0583|consen 31 GKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDY 110 (370)
T ss_pred eeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHH
Confidence 89999977 7899999965442 237999999999 99999999999999999999999999999999
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC-CcEEEeeecCcccccccCCceeeecccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
+...+ .+.+.....++.|++.|++|||+.+ |+||||||+|||++.+ +++||+|||++..... ........+
T Consensus 111 i~~~g--~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~---~~~~l~t~c 182 (370)
T KOG0583|consen 111 IVNKG--RLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLSAISPG---EDGLLKTFC 182 (370)
T ss_pred HHHcC--CCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccccccCC---CCCcccCCC
Confidence 97733 3899999999999999999999955 9999999999999999 9999999999987641 112345679
Q ss_pred cCCCccCccccccCC-CC-cccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCC
Q 042486 506 GTKGYMAPEYLENGL-VS-TKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNY 583 (635)
Q Consensus 506 gt~~y~aPE~~~~~~-~s-~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~ 583 (635)
||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||...... . ....+... ...+
T Consensus 183 Gsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~--~----------------l~~ki~~~--~~~~ 242 (370)
T KOG0583|consen 183 GSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP--N----------------LYRKIRKG--EFKI 242 (370)
T ss_pred CCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH--H----------------HHHHHhcC--CccC
Confidence 999999999999866 64 8899999999999999999998642111 1 11111111 1233
Q ss_pred ChHH-HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhh
Q 042486 584 PPVT-AILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 584 ~~~~-~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 622 (635)
|... +..+..|+.+||..||.+|+++.||+. ..|+..
T Consensus 243 p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~--h~w~~~ 280 (370)
T KOG0583|consen 243 PSYLLSPEARSLIEKMLVPDPSTRITLLEILE--HPWFQK 280 (370)
T ss_pred CCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh--Chhhcc
Confidence 4444 677899999999999999999999993 356654
No 29
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=340.17 Aligned_cols=240 Identities=30% Similarity=0.495 Sum_probs=194.4
Q ss_pred ceEEEeee---CCc----EEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI---GGD----FVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~---~~~----~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|.+ ++. .||||.+++ +|.+|..+|++++|||||+++|+|.+.+..++++|||++|+|..+
T Consensus 706 G~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sf 785 (1025)
T KOG1095|consen 706 GEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSF 785 (1025)
T ss_pred cceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHH
Confidence 99999998 333 499999865 477899999999999999999999999999999999999999999
Q ss_pred hccc-----CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeee
Q 042486 427 INDK-----GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT 501 (635)
Q Consensus 427 l~~~-----~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 501 (635)
|++. ....|+..+.+.++.|||+|++||++.+ +|||||..+|+||++...+||+|||+|+.+...+. ...
T Consensus 786 lr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~y--yr~ 860 (1025)
T KOG1095|consen 786 LRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGLARDIYDKDY--YRK 860 (1025)
T ss_pred HHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccchhHhhhhchh--eec
Confidence 9764 1345899999999999999999999954 99999999999999999999999999995443321 111
Q ss_pred c-ccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCC
Q 042486 502 S-HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQ 580 (635)
Q Consensus 502 ~-~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~ 580 (635)
. ...-...|||||.+..+.++.|+|||||||++||++|...++...... .+.+..++... +
T Consensus 861 ~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-----------------~~v~~~~~~gg-R 922 (1025)
T KOG1095|consen 861 HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-----------------FEVLLDVLEGG-R 922 (1025)
T ss_pred cCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch-----------------HHHHHHHHhCC-c
Confidence 1 123345899999999999999999999999999999955443221111 11122122222 3
Q ss_pred CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcc
Q 042486 581 GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624 (635)
Q Consensus 581 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~ 624 (635)
-+.|..++..+.+++..||+.+|++||++..|++.+..+.+...
T Consensus 923 L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 923 LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred cCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 35677788889999999999999999999999999999887653
No 30
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-35 Score=310.18 Aligned_cols=244 Identities=21% Similarity=0.335 Sum_probs=187.5
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+++. ++..+|+|.+.. .+.+|+++|++++|+||+++++++..++..++||||+++|+|.+++....
T Consensus 19 g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 98 (331)
T cd06649 19 GVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK 98 (331)
T ss_pred EEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcC
Confidence 89999998 578899998753 35689999999999999999999999999999999999999999996543
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
.+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||++....... .....|+..|+
T Consensus 99 --~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~g~~~y~ 169 (331)
T cd06649 99 --RIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYM 169 (331)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccccc-----cccCCCCcCcC
Confidence 389999999999999999999973 349999999999999999999999999987553221 23356899999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhc-ccccCCc-----------------------
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNP-VLHKEDG----------------------- 567 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~-~~~~~~~----------------------- 567 (635)
|||++.+..++.++|||||||++|||++|+.||....... +...... .......
T Consensus 170 aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (331)
T cd06649 170 SPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDS 247 (331)
T ss_pred CHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccccCCccccCccccccccccccccccc
Confidence 9999998889999999999999999999999986433222 1111111 0000000
Q ss_pred ------hhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 568 ------EESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 568 ------~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
.+....+.............+..+.+|+.+||+.||++|||++|++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 248 RPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred ccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0000111111111111123456689999999999999999999999873
No 31
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.8e-35 Score=300.15 Aligned_cols=234 Identities=24% Similarity=0.401 Sum_probs=188.1
Q ss_pred ceEEEeee--CCcEEEEEEeccC------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK 433 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~ 433 (635)
|.||+|.+ .+..||+|.+..+ +.+|++++++++|+||+++++++..++..+++|||+++++|.+++......
T Consensus 20 ~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~ 99 (263)
T cd05052 20 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 99 (263)
T ss_pred ceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCC
Confidence 89999987 5789999988653 457999999999999999999999999999999999999999999665545
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCc
Q 042486 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAP 513 (635)
Q Consensus 434 ~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP 513 (635)
.+++..++.++.|++.||.|||+. +++||||||+||++++++.+||+|||++........ .......++..|+||
T Consensus 100 ~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~--~~~~~~~~~~~y~aP 174 (263)
T cd05052 100 EVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAP 174 (263)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccccee--eccCCCCCccccCCH
Confidence 689999999999999999999985 499999999999999999999999999876543211 111122345689999
Q ss_pred cccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 514 EYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 514 E~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
|.+.+..++.++||||||+++|||++ |..|+.....+. ...... .......+...+..+.
T Consensus 175 E~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~ 235 (263)
T cd05052 175 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLE-----------------KGYRMERPEGCPPKVY 235 (263)
T ss_pred HHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH-----------------CCCCCCCCCCCCHHHH
Confidence 99998889999999999999999998 887765322211 111111 0111122333445689
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
+++.+||+.||++||++.++++.|+.+
T Consensus 236 ~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 236 ELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 999999999999999999999999876
No 32
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=9.1e-36 Score=306.24 Aligned_cols=231 Identities=26% Similarity=0.313 Sum_probs=185.1
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||++.. +++.||+|.+... +.+|++++++++|+||+++++.+.+++..++||||+++|+|.+++..
T Consensus 14 g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~ 93 (285)
T cd05631 14 GEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN 93 (285)
T ss_pred EEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHh
Confidence 89999987 7899999987531 34689999999999999999999999999999999999999988865
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++....... ......||..
T Consensus 94 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~~~g~~~ 166 (285)
T cd05631 94 MGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE----TVRGRVGTVG 166 (285)
T ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC----eecCCCCCCC
Confidence 44445899999999999999999999854 9999999999999999999999999987643221 1233578999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.+..++.++|||||||++|||++|+.||......... + .....+... ...++...+.
T Consensus 167 y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~--~------------~~~~~~~~~--~~~~~~~~s~ 230 (285)
T cd05631 167 YMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR--E------------EVDRRVKED--QEEYSEKFSE 230 (285)
T ss_pred ccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH--H------------HHHHHhhcc--cccCCccCCH
Confidence 99999999999999999999999999999999998643221100 0 000001010 1123333455
Q ss_pred HHHHHHHHhhhcCCCCCCC-----HHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPA-----MDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs-----~~evl~~ 615 (635)
.+.+|+.+||+.||++||+ ++|++++
T Consensus 231 ~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 231 DAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred HHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 6899999999999999997 7888875
No 33
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=7.3e-36 Score=312.66 Aligned_cols=226 Identities=25% Similarity=0.352 Sum_probs=184.1
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||||.++.. +.+|++++++++||||+++++++..++..|+||||+++|+|.+++..
T Consensus 9 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 88 (323)
T cd05571 9 GKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR 88 (323)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHH
Confidence 89999987 7889999988642 34688999999999999999999999999999999999999999865
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... .......||+.
T Consensus 89 ~~--~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~---~~~~~~~gt~~ 160 (323)
T cd05571 89 ER--VFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPE 160 (323)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC---CcccceecCcc
Confidence 43 4899999999999999999999855 9999999999999999999999999987532211 11234579999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.+..++.++|||||||++|||++|+.||...+.+. ... .+.... ...+...+.
T Consensus 161 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~~~----------------~~~~~~--~~~p~~~~~ 220 (323)
T cd05571 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFE----------------LILMEE--IRFPRTLSP 220 (323)
T ss_pred ccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH--HHH----------------HHHcCC--CCCCCCCCH
Confidence 999999998889999999999999999999999985432211 111 111100 122334455
Q ss_pred HHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
.+.+++.+||+.||++|| ++.+++++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 689999999999999999 79998875
No 34
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.4e-35 Score=309.41 Aligned_cols=226 Identities=25% Similarity=0.398 Sum_probs=176.9
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+++. +++.||||.+.. .+.+|++++++++|+||+++++++.+++..++||||+++|+|.+..
T Consensus 88 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~---- 163 (353)
T PLN00034 88 GTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH---- 163 (353)
T ss_pred eEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccc----
Confidence 89999987 688999999853 2567999999999999999999999999999999999999986543
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
...+..+..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++....... ......||..|+
T Consensus 164 --~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~---~~~~~~gt~~y~ 235 (353)
T PLN00034 164 --IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD---PCNSSVGTIAYM 235 (353)
T ss_pred --cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccccc---cccccccCcccc
Confidence 2567788899999999999999855 99999999999999999999999999876543211 123357899999
Q ss_pred Ccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 512 APEYLEN-----GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 512 aPE~~~~-----~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
|||++.. ...+.++|||||||++|||++|+.||....... +... ...... ......+..
T Consensus 236 aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~-------------~~~~~~-~~~~~~~~~ 299 (353)
T PLN00034 236 SPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WASL-------------MCAICM-SQPPEAPAT 299 (353)
T ss_pred CccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HHHH-------------HHHHhc-cCCCCCCCc
Confidence 9998743 234568999999999999999999986322111 0000 000000 001112233
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+..+.+|+.+||+.||++||++.|++++
T Consensus 300 ~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 300 ASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 45568999999999999999999999987
No 35
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.7e-35 Score=303.40 Aligned_cols=235 Identities=25% Similarity=0.490 Sum_probs=187.2
Q ss_pred ceEEEeeeCC-------cEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIGG-------DFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~~-------~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|...+ ..||+|.++.. +.+|++++++++|+||+++++++.+.+..+++|||+++++|.++
T Consensus 19 g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~ 98 (283)
T cd05048 19 GKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEF 98 (283)
T ss_pred CcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHH
Confidence 8999998732 46999988642 56799999999999999999999988899999999999999999
Q ss_pred hcccCC--------------CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccc
Q 042486 427 INDKGG--------------KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492 (635)
Q Consensus 427 l~~~~~--------------~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 492 (635)
+..... ..+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||+++...
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~ 175 (283)
T cd05048 99 LVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLTVKISDFGLSRDIY 175 (283)
T ss_pred HHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCCcEEECCCcceeecc
Confidence 854311 35889999999999999999999854 9999999999999999999999999987543
Q ss_pred ccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhh
Q 042486 493 RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESL 571 (635)
Q Consensus 493 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l 571 (635)
.... ........++..|+|||.+.++.++.++|||||||++|||++ |..||......+ ....
T Consensus 176 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~--~~~~-------------- 238 (283)
T cd05048 176 SADY-YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE--VIEM-------------- 238 (283)
T ss_pred cccc-ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHH--------------
Confidence 3221 112233456788999999988889999999999999999998 888875432211 1111
Q ss_pred hhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 572 RHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 572 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
+. .......+...+..+.+|+.+||+.||.+||++.||+++|+++
T Consensus 239 --i~-~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 239 --IR-SRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred --HH-cCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11 1111122344556799999999999999999999999999753
No 36
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4e-36 Score=293.13 Aligned_cols=244 Identities=24% Similarity=0.295 Sum_probs=187.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEec--CCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFN--GGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|++ +++.||+|+++.+ ..+||.+|.+++|||||.+-.+... -+..||||||++. +|...+.
T Consensus 90 GiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d 168 (419)
T KOG0663|consen 90 GVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLME 168 (419)
T ss_pred eeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHH
Confidence 89999998 7889999999764 3589999999999999999998874 4568999999977 8988886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... +.+...+..-++.|+++|++|||+.. |+|||||++|+|++..|.+||+|||+|+.++..... .+..+-|.
T Consensus 169 ~m~-q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~---~T~lVVTL 241 (419)
T KOG0663|consen 169 TMK-QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP---YTPLVVTL 241 (419)
T ss_pred hcc-CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCCccc---CcceEEEe
Confidence 655 44888999999999999999999966 999999999999999999999999999988765322 34467899
Q ss_pred CccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc-----hhhhhhh--------
Q 042486 509 GYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG-----EESLRHL-------- 574 (635)
Q Consensus 509 ~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-----~~~l~~~-------- 574 (635)
+|+|||.+.+ ..|+...|+||+|||+.||+++++.|...++-++ .+.+-..+..... ...+...
T Consensus 242 WYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ--l~~If~llGtPte~iwpg~~~lp~~k~~~f~~~ 319 (419)
T KOG0663|consen 242 WYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ--LDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEH 319 (419)
T ss_pred eecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH--HHHHHHHhCCCccccCCCccccchhhccccCCC
Confidence 9999999876 5689999999999999999999987765444322 1111111111100 0011100
Q ss_pred cCCcCCCCCChH-HHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 575 MDPSMQGNYPPV-TAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 575 ~d~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
-...++..++.. ....-.+|+..+|..||++|.|++|.+++
T Consensus 320 pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 320 PYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred CchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 000111112211 34556899999999999999999999887
No 37
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-35 Score=316.50 Aligned_cols=236 Identities=25% Similarity=0.407 Sum_probs=183.7
Q ss_pred ceEEEeee-------CCcEEEEEEeccC--------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI-------GGDFVAIKKVYGD--------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~-------~~~~vavK~~~~~--------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
|.||++++ ++..||||+++.. +.+|+++|+.+ +||||++++++|.+++..++||||+++|+|.+
T Consensus 49 G~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~ 128 (375)
T cd05104 49 GKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLN 128 (375)
T ss_pred ceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHH
Confidence 89999864 3558999998642 45799999999 89999999999999999999999999999999
Q ss_pred hhcccC-------------------------------------------------------------------------C
Q 042486 426 WINDKG-------------------------------------------------------------------------G 432 (635)
Q Consensus 426 ~l~~~~-------------------------------------------------------------------------~ 432 (635)
++.... .
T Consensus 129 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (375)
T cd05104 129 FLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDE 208 (375)
T ss_pred HHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccC
Confidence 885321 1
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
..+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++........ .......++..|+|
T Consensus 209 ~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~~~y~a 284 (375)
T cd05104 209 LALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY-VVKGNARLPVKWMA 284 (375)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc-cccCCCCCCcceeC
Confidence 2478899999999999999999985 4999999999999999999999999999765432211 11222345668999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l 591 (635)
||.+.+..++.++||||||+++|||++ |..||....... .....+. .......+...+..+
T Consensus 285 PE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~-----------------~~~~~~~~~~~~~~l 346 (375)
T cd05104 285 PESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIK-----------------EGYRMLSPECAPSEM 346 (375)
T ss_pred hhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHH-----------------hCccCCCCCCCCHHH
Confidence 999999999999999999999999998 777764322211 1111111 111111122234568
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
.+|+.+||+.||++||++.||++.|++.
T Consensus 347 ~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 347 YDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 9999999999999999999999999864
No 38
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.8e-36 Score=313.68 Aligned_cols=223 Identities=20% Similarity=0.323 Sum_probs=182.8
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||+|.++. .+.+|+.++++++||||+++++++.+++..|+||||+++|+|.+++..
T Consensus 32 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 111 (329)
T PTZ00263 32 GRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK 111 (329)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH
Confidence 89999988 678999998853 245799999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ....||+.
T Consensus 112 ~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~------~~~~gt~~ 180 (329)
T PTZ00263 112 AG--RFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT------FTLCGTPE 180 (329)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCCc------ceecCChh
Confidence 43 3889999999999999999999855 9999999999999999999999999997653321 23468999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.+..++.++|||||||++|||++|+.||....... ....+..... ..+...+.
T Consensus 181 y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------------------~~~~i~~~~~--~~p~~~~~ 240 (329)
T PTZ00263 181 YLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR------------------IYEKILAGRL--KFPNWFDG 240 (329)
T ss_pred hcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH------------------HHHHHhcCCc--CCCCCCCH
Confidence 999999998889999999999999999999999985322111 1111111111 12233445
Q ss_pred HHHHHHHHhhhcCCCCCCC-----HHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPA-----MDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs-----~~evl~~ 615 (635)
.+.+|+.+||+.||++||+ +++++.|
T Consensus 241 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 241 RARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 6889999999999999997 6888766
No 39
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-35 Score=316.38 Aligned_cols=237 Identities=26% Similarity=0.438 Sum_probs=185.4
Q ss_pred ceEEEeee-------CCcEEEEEEeccC--------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI-------GGDFVAIKKVYGD--------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~-------~~~~vavK~~~~~--------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
|.||+++. ++..||||+++.. +.+|+++++++ +|+||++++++|...+..++||||+++|+|.+
T Consensus 52 g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~ 131 (374)
T cd05106 52 GKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLN 131 (374)
T ss_pred ccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHH
Confidence 89999875 2347999998642 45799999999 89999999999999999999999999999999
Q ss_pred hhcccC--------------------------------------------------------------------CCCCCH
Q 042486 426 WINDKG--------------------------------------------------------------------GKFLDW 437 (635)
Q Consensus 426 ~l~~~~--------------------------------------------------------------------~~~l~~ 437 (635)
++.... ...+++
T Consensus 132 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 211 (374)
T cd05106 132 FLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDL 211 (374)
T ss_pred HHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCH
Confidence 884321 124788
Q ss_pred HHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccc
Q 042486 438 AQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLE 517 (635)
Q Consensus 438 ~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 517 (635)
..+.+++.|++.||.|||+. +++||||||+||++++++.+||+|||+++....... ........++..|+|||++.
T Consensus 212 ~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-~~~~~~~~~~~~y~aPE~~~ 287 (374)
T cd05106 212 DDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN-YVVKGNARLPVKWMAPESIF 287 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-eeeccCCCCccceeCHHHhc
Confidence 89999999999999999984 499999999999999999999999999875533221 11222334567899999999
Q ss_pred cCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHH
Q 042486 518 NGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIE 596 (635)
Q Consensus 518 ~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~ 596 (635)
+..++.++||||||+++|||++ |+.||....... ...... ........+...+..+.+++.
T Consensus 288 ~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~-----------------~~~~~~~~~~~~~~~l~~li~ 349 (374)
T cd05106 288 DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMV-----------------KRGYQMSRPDFAPPEIYSIMK 349 (374)
T ss_pred CCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHH-----------------HcccCccCCCCCCHHHHHHHH
Confidence 8899999999999999999997 998875432211 111111 111111112223456899999
Q ss_pred HhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 597 SCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 597 ~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
+||+.||++||++.+|++.|++++
T Consensus 350 ~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 350 MCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHcCCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999999876
No 40
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.2e-35 Score=306.18 Aligned_cols=240 Identities=24% Similarity=0.419 Sum_probs=182.0
Q ss_pred ceEEEeeeC------------------CcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEe
Q 042486 362 GSVYRGKIG------------------GDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVY 415 (635)
Q Consensus 362 g~Vy~g~~~------------------~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 415 (635)
|.||++.+. +..||+|.++. ++.+|+++|.+++|+||+++++++.+.+..++||
T Consensus 19 g~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 98 (304)
T cd05096 19 GEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMIT 98 (304)
T ss_pred eEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEE
Confidence 899999752 33699998864 3567999999999999999999999999999999
Q ss_pred ecccCCCcchhhcccC-----------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC
Q 042486 416 ENAVNGSLSVWINDKG-----------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF 478 (635)
Q Consensus 416 E~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~ 478 (635)
||+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH~dlkp~Nill~~~~ 175 (304)
T cd05096 99 EYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVHRDLATRNCLVGENL 175 (304)
T ss_pred ecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccccCcchhheEEcCCc
Confidence 9999999999884321 124788899999999999999999855 99999999999999999
Q ss_pred cEEEeeecCcccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhC--CCCCCCCcchhhHHHH
Q 042486 479 RAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG--KEAPALYSEENMLLVD 556 (635)
Q Consensus 479 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG--~~p~~~~~~~~~~l~~ 556 (635)
.+||+|||+++....... ........++..|+|||++..+.++.++||||||+++|||+++ ..|+...... ....
T Consensus 176 ~~kl~DfG~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~--~~~~ 252 (304)
T cd05096 176 TIKIADFGMSRNLYAGDY-YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE--QVIE 252 (304)
T ss_pred cEEECCCccceecccCce-eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH--HHHH
Confidence 999999999975533221 1223334567889999999888899999999999999999975 4455432221 1111
Q ss_pred hhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 557 VLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 557 ~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.....+.... .......++..+..+.+++.+||+.||++|||++||.+.|+
T Consensus 253 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 253 NAGEFFRDQG----------RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHHhhhcc----------ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 1111110000 00001112234456899999999999999999999998875
No 41
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=6.7e-36 Score=308.21 Aligned_cols=223 Identities=23% Similarity=0.355 Sum_probs=183.1
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||+|.+.. .+.+|++++++++||||+++++++.+++..++||||+++|+|.+++..
T Consensus 15 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 94 (291)
T cd05612 15 GRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN 94 (291)
T ss_pred eEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH
Confidence 89999988 588999998843 245799999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++..... .....|++.
T Consensus 95 ~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~ 163 (291)
T cd05612 95 SG--RFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------TWTLCGTPE 163 (291)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC------cccccCChh
Confidence 43 3899999999999999999999854 999999999999999999999999998765332 123468999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||.+.+..++.++|||||||++|||++|+.||....... . ...+.... ...+...+.
T Consensus 164 y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~--~----------------~~~i~~~~--~~~~~~~~~ 223 (291)
T cd05612 164 YLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG--I----------------YEKILAGK--LEFPRHLDL 223 (291)
T ss_pred hcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--H----------------HHHHHhCC--cCCCccCCH
Confidence 999999998889999999999999999999999986432211 1 11111111 112233345
Q ss_pred HHHHHHHHhhhcCCCCCCC-----HHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPA-----MDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs-----~~evl~~ 615 (635)
.+.+++++||+.||.+||+ ++|++++
T Consensus 224 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 224 YAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 6899999999999999995 8888877
No 42
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.5e-35 Score=299.81 Aligned_cols=233 Identities=24% Similarity=0.381 Sum_probs=184.7
Q ss_pred ceEEEeee-----CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI-----GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~-----~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|.+ .+..||+|.++.. +.+|+..+++++||||+++++++..++..++||||+++|+|.+++.
T Consensus 19 g~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 98 (266)
T cd05064 19 GELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLR 98 (266)
T ss_pred CeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHH
Confidence 89999975 3568999988643 4579999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+|++|||.+....... ........++.
T Consensus 99 ~~~-~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~ 172 (266)
T cd05064 99 KHE-GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA--IYTTMSGKSPV 172 (266)
T ss_pred hCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccccc--hhcccCCCCce
Confidence 543 24899999999999999999999854 9999999999999999999999999876432211 11111234567
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
.|+|||.+.+..++.++|||||||++||+++ |+.||....... ....+ .+ ......+...
T Consensus 173 ~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~~~~~----------------~~-~~~~~~~~~~ 233 (266)
T cd05064 173 LWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--VIKAV----------------ED-GFRLPAPRNC 233 (266)
T ss_pred eecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHH----------------HC-CCCCCCCCCC
Confidence 8999999999999999999999999999875 888875332211 11111 00 0111123344
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
+..+.+++.+||+.+|.+||+++||.+.|+++
T Consensus 234 ~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 234 PNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 55689999999999999999999999999876
No 43
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.4e-35 Score=297.66 Aligned_cols=233 Identities=26% Similarity=0.416 Sum_probs=186.1
Q ss_pred ceEEEeee-CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||+|.. ++..||+|.++. ++.+|++++++++|+||+++++++...+..+++|||+++++|.+++.......
T Consensus 20 ~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~ 99 (261)
T cd05068 20 GEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRA 99 (261)
T ss_pred ccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCC
Confidence 79999987 567899999864 35679999999999999999999999999999999999999999997655456
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++....... ........+..|+|||
T Consensus 100 ~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE 174 (261)
T cd05068 100 LKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY--EAREGAKFPIKWTAPE 174 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc--cccCCCcCceeccCcc
Confidence 89999999999999999999985 499999999999999999999999999886542211 1111122345799999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
++.+..++.++||||||+++|||++ |+.|+...... .....+. .......+...+..+.+
T Consensus 175 ~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~~~ 235 (261)
T cd05068 175 AALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQVD-----------------QGYRMPCPPGCPKELYD 235 (261)
T ss_pred ccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHH-----------------cCCCCCCCCcCCHHHHH
Confidence 9998889999999999999999999 88777532211 1111111 00111122334456899
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
++.+|++.||++||+++++.+.|+.
T Consensus 236 li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 236 IMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHHhhcCcccCCCHHHHHHHHhc
Confidence 9999999999999999999999975
No 44
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=286.14 Aligned_cols=233 Identities=24% Similarity=0.422 Sum_probs=194.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|+|...+. ++..+|+|.+..+ ..+|..+|+.+.||.++++.+.|.+.+..||||||.+||.|..++++
T Consensus 58 GrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk 137 (355)
T KOG0616|consen 58 GRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRK 137 (355)
T ss_pred ceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHh
Confidence 88988876 7899999998653 45799999999999999999999999999999999999999999977
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.+. +++....-++.+|+.||+|||+.+ |++|||||+|||+|.+|.+||+|||+|+.... .+...+||+.
T Consensus 138 ~~r--F~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~------rT~TlCGTPe 206 (355)
T KOG0616|consen 138 SGR--FSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSG------RTWTLCGTPE 206 (355)
T ss_pred cCC--CCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecC------cEEEecCCcc
Confidence 554 899999999999999999999966 99999999999999999999999999986643 2556899999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||.+....+..++|.|||||++|||+.|.+||..... .....+++...+ .+|...+.
T Consensus 207 YLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~------------------~~iY~KI~~~~v--~fP~~fs~ 266 (355)
T KOG0616|consen 207 YLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP------------------IQIYEKILEGKV--KFPSYFSS 266 (355)
T ss_pred ccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh------------------HHHHHHHHhCcc--cCCcccCH
Confidence 9999999999999999999999999999999999864322 122333333332 45666777
Q ss_pred HHHHHHHHhhhcCCCCC-----CCHHHHHHHHHHHHhhcccccc
Q 042486 590 LVIRLIESCLKKDPSGR-----PAMDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~R-----Ps~~evl~~L~~~~~~s~~w~~ 628 (635)
.+.+|++..|+.|-.+| .-..+|..| .|+. +.+|+.
T Consensus 267 ~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H--~wF~-~v~W~~ 307 (355)
T KOG0616|consen 267 DAKDLLKKLLQVDLTKRFGNLKNGVEDIKNH--PWFK-GVDWEA 307 (355)
T ss_pred HHHHHHHHHHhhhhHhhhcCcCCCccccccC--cccc-cccHHH
Confidence 79999999999999999 233344444 3333 566765
No 45
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.7e-36 Score=301.69 Aligned_cols=232 Identities=32% Similarity=0.551 Sum_probs=179.0
Q ss_pred ceEEEeeeC------CcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKIG------GDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~~------~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|.+. +..|+||.++. ++.+|++.+++++||||++++|++...+..++|+||+++|+|.+++
T Consensus 13 g~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L 92 (259)
T PF07714_consen 13 GKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYL 92 (259)
T ss_dssp EEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHH
T ss_pred cEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccccccccccc
Confidence 899999987 67899999954 3567899999999999999999999888899999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.......+++..+..|+.|++.||.|||+. +++|+||+++||++++++.+||+|||++........ ..........
T Consensus 93 ~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~-~~~~~~~~~~ 168 (259)
T PF07714_consen 93 KSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK-YKNDSSQQLP 168 (259)
T ss_dssp HHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-EEESTTSESG
T ss_pred cccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc-cccccccccc
Confidence 776445599999999999999999999985 499999999999999999999999999986632211 1222334567
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
..|+|||.+....++.++||||||+++|||++ |+.|+...... .. ...+.+.. ....+..
T Consensus 169 ~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~--~~----------------~~~~~~~~-~~~~~~~ 229 (259)
T PF07714_consen 169 LRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE--EI----------------IEKLKQGQ-RLPIPDN 229 (259)
T ss_dssp GGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH--HH----------------HHHHHTTE-ETTSBTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc--cc----------------cccccccc-cceeccc
Confidence 78999999998889999999999999999999 56665433211 11 11111111 1122333
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
.+..+.+++.+||+.||++||++.++++.|
T Consensus 230 ~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 230 CPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred hhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 455689999999999999999999999876
No 46
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=300.72 Aligned_cols=244 Identities=27% Similarity=0.342 Sum_probs=189.9
Q ss_pred hcCCCCCCccc----ceEEEeee--CCcEEEEEEecc---------------------ChHHHHHHHhhhccCCcccEEE
Q 042486 351 TDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG---------------------DASDQIKLLNKINHSSLIRLLG 403 (635)
Q Consensus 351 t~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~---------------------~~~~E~~~l~~l~h~nIv~l~~ 403 (635)
.+.|.....|| |.|-+++. +++.||||.+.+ .+.+||.+|++++|+|||+|+.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 34454444555 88888887 789999998843 2458999999999999999999
Q ss_pred EEec--CCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEE
Q 042486 404 ICFN--GGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAK 481 (635)
Q Consensus 404 ~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~k 481 (635)
+..+ .+.+|||+|||..|.+...-.... .+++.+.++++.++..||+|||.++ |+||||||+|+||+++|++|
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p~d~~--els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCPPDKP--ELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCCCCcc--cccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCcEE
Confidence 9875 456899999999888755432221 1899999999999999999999955 99999999999999999999
Q ss_pred EeeecCccccccc--CCceeeecccccCCCccCccccccCC----CCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHH
Q 042486 482 IANFALARPAERQ--EGEFALTSHIVGTKGYMAPEYLENGL----VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLV 555 (635)
Q Consensus 482 l~Dfg~a~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~ 555 (635)
|+|||.+...... .+........+||+.|+|||....+. .+.+.||||+||+||-|+.|+.||....
T Consensus 251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~------- 323 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF------- 323 (576)
T ss_pred eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch-------
Confidence 9999998755222 11112223478999999999887633 4678999999999999999999985311
Q ss_pred HhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 556 DVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 556 ~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
..+..+++++..+.....++....+.+||++||+.||++|.+..+|..|.-
T Consensus 324 -----------~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 324 -----------ELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred -----------HHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 123334444444433333456677999999999999999999999988754
No 47
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=307.87 Aligned_cols=242 Identities=24% Similarity=0.423 Sum_probs=193.9
Q ss_pred ceEEEeeeCC-cEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKIGG-DFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~~~-~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.|..+..++ ..||||.+++ +|.+|+++|.+++||||++|+|+|..++.+++++||+++|+|.+++.....
T Consensus 552 GEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~ahea 631 (807)
T KOG1094|consen 552 GEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHEL 631 (807)
T ss_pred ceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccC
Confidence 8899998865 8999999976 367899999999999999999999999999999999999999999977654
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
..+.-.....|+.||+.||+||.+.. +|||||.++|+|+|+++++||+|||+++..-..+. +......+-..+|||
T Consensus 632 pt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y-y~vqgr~vlpiRwma 707 (807)
T KOG1094|consen 632 PTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY-YRVQGRAVLPIRWMA 707 (807)
T ss_pred cccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCc-eeeecceeeeeeehh
Confidence 43556677789999999999999966 99999999999999999999999999996544332 222334556689999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHh--CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLS--GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~ellt--G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~ 590 (635)
||.+..++++.++|||+||+++||+++ ...|+....++ ...+....++.... +......|..++..
T Consensus 708 wEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~~~~~~~----------~~~~l~~P~~cp~~ 775 (807)
T KOG1094|consen 708 WESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGEFFRDQG----------RQVVLSRPPACPQG 775 (807)
T ss_pred HHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhhhcCCCC----------cceeccCCCcCcHH
Confidence 999999999999999999999999866 44565432222 22222222222111 11122346667788
Q ss_pred HHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 591 VIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 591 l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
+.+++.+||..|.++||+++++...|.+.
T Consensus 776 lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 776 LYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 99999999999999999999999998864
No 48
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.6e-35 Score=296.59 Aligned_cols=234 Identities=24% Similarity=0.403 Sum_probs=186.5
Q ss_pred ceEEEeee-CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||+|.. ++..||+|.+.. .+.+|+.++++++|+||+++++.+.+.+..+++|||+++++|.+++.......
T Consensus 20 g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 99 (261)
T cd05072 20 GEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGK 99 (261)
T ss_pred ceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCC
Confidence 89999987 567899998764 34579999999999999999999999999999999999999999997655556
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++........ .......++..|+|||
T Consensus 100 ~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE 174 (261)
T cd05072 100 VLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY--TAREGAKFPIKWTAPE 174 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce--eccCCCccceecCCHH
Confidence 899999999999999999999854 99999999999999999999999999986543221 1112234567899999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
++..+.++.++||||||+++|+|++ |+.||....... ....+... . ........+..+.+
T Consensus 175 ~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~~-------------~----~~~~~~~~~~~~~~ 235 (261)
T cd05072 175 AINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSALQRG-------------Y----RMPRMENCPDELYD 235 (261)
T ss_pred HhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHHHcC-------------C----CCCCCCCCCHHHHH
Confidence 9988889999999999999999998 888875322211 11111100 0 00111223455899
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
++.+||..+|++||+++++.+.|+++
T Consensus 236 li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 236 IMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHHHccCCcccCcCHHHHHHHHhcC
Confidence 99999999999999999999998753
No 49
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2e-35 Score=310.79 Aligned_cols=231 Identities=21% Similarity=0.310 Sum_probs=184.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||||+++.. +.+|++++++++|+||+++++++.+++..|+||||+++|+|.+++..
T Consensus 15 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~ 94 (333)
T cd05600 15 GQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN 94 (333)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH
Confidence 89999998 5789999998642 45689999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..... ......||+.
T Consensus 95 ~~--~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------~~~~~~gt~~ 163 (333)
T cd05600 95 LG--VLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT------YANSVVGSPD 163 (333)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc------ccCCcccCcc
Confidence 43 3899999999999999999999855 99999999999999999999999999975543 1234578999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... .. +..+.. .......+.
T Consensus 164 y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~~------~~---~~~~~~-~~~~~~~s~ 231 (333)
T cd05600 164 YMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET--WENLKYWK------ET---LQRPVY-DDPRFNLSD 231 (333)
T ss_pred ccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH--HHHHHhcc------cc---ccCCCC-CccccccCH
Confidence 9999999988999999999999999999999999864332211 11100000 00 000000 000112355
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+.+++.+||..+|.+||+++|++++
T Consensus 232 ~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 232 EAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 68999999999999999999999987
No 50
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.1e-34 Score=294.70 Aligned_cols=235 Identities=24% Similarity=0.424 Sum_probs=186.6
Q ss_pred ceEEEeeeC-----CcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKIG-----GDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~~-----~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|++. ...||||.++.. +.+|+.++++++|+||+++++++..++..+++|||+++++|.+++.
T Consensus 18 g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~ 97 (266)
T cd05033 18 GEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLR 97 (266)
T ss_pred ceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHH
Confidence 899999872 347999987642 4568999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
.... .+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||+++........ .......++.
T Consensus 98 ~~~~-~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~ 172 (266)
T cd05033 98 ENDG-KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT-YTTKGGKIPI 172 (266)
T ss_pred hccC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcccccccc-eeccCCCCCc
Confidence 5443 489999999999999999999984 4999999999999999999999999999876522211 1122234567
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
.|+|||.+.+..++.++||||||+++|||++ |..|+....... ..+.+.. . .....+...
T Consensus 173 ~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~----------------~-~~~~~~~~~ 233 (266)
T cd05033 173 RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--VIKAVED----------------G-YRLPPPMDC 233 (266)
T ss_pred cccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--HHHHHHc----------------C-CCCCCCCCC
Confidence 8999999998889999999999999999998 888874322211 1111110 0 001112234
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
+..+.+++.+||+.+|++||+++|++++|++++
T Consensus 234 ~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 234 PSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 456899999999999999999999999998763
No 51
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.4e-35 Score=306.10 Aligned_cols=226 Identities=22% Similarity=0.308 Sum_probs=182.1
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||+|.++.. +.+|+.++++++||||+++++++.+++..++||||+++|+|.+++..
T Consensus 7 g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 86 (312)
T cd05585 7 GKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR 86 (312)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh
Confidence 89999987 5789999988532 34689999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... .......||+.
T Consensus 87 ~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~ 158 (312)
T cd05585 87 EG--RFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD---DKTNTFCGTPE 158 (312)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC---CccccccCCcc
Confidence 43 3899999999999999999999855 9999999999999999999999999987543221 12234578999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.... ...+...+.
T Consensus 159 y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~------------------~~~~~~~~~--~~~~~~~~~ 218 (312)
T cd05585 159 YLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE------------------MYRKILQEP--LRFPDGFDR 218 (312)
T ss_pred cCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH------------------HHHHHHcCC--CCCCCcCCH
Confidence 999999999889999999999999999999999985422211 111111111 122333455
Q ss_pred HHHHHHHHhhhcCCCCCCC---HHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPA---MDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs---~~evl~~ 615 (635)
.+.+++.+||+.||++||+ +.|++.+
T Consensus 219 ~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 219 DAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 6899999999999999985 5666554
No 52
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=8.7e-35 Score=303.55 Aligned_cols=248 Identities=23% Similarity=0.403 Sum_probs=190.6
Q ss_pred CCCCCccc----ceEEEeee--CCc----EEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEe
Q 042486 354 FNPSCWIK----GSVYRGKI--GGD----FVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVY 415 (635)
Q Consensus 354 f~~~~~ig----g~Vy~g~~--~~~----~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 415 (635)
|.....|| |.||+|++ ++. .||+|.++. ++.+|+.++++++|+||++++|+|... ..++++
T Consensus 9 f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~ 87 (316)
T cd05108 9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIT 87 (316)
T ss_pred ceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceeee
Confidence 44444444 89999986 333 489999853 245788999999999999999999764 568999
Q ss_pred ecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccC
Q 042486 416 ENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQE 495 (635)
Q Consensus 416 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 495 (635)
||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 88 e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 88 QLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred ecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccCCC
Confidence 9999999999997543 23889999999999999999999854 9999999999999999999999999998665332
Q ss_pred CceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhh
Q 042486 496 GEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL 574 (635)
Q Consensus 496 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 574 (635)
... ......++..|+|||++.+..++.++||||||+++|||++ |+.|+....... +....
T Consensus 164 ~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--~~~~~---------------- 224 (316)
T cd05108 164 KEY-HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSIL---------------- 224 (316)
T ss_pred cce-eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH----------------
Confidence 211 1122234668999999999999999999999999999998 888875322211 11111
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcccc
Q 042486 575 MDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAW 626 (635)
Q Consensus 575 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w 626 (635)
........+......+.+++.+||+.||.+||++.+++..|.++......|
T Consensus 225 -~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~~~ 275 (316)
T cd05108 225 -EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 275 (316)
T ss_pred -hCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCchh
Confidence 011111112233455889999999999999999999999999998766443
No 53
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.3e-34 Score=304.49 Aligned_cols=248 Identities=20% Similarity=0.333 Sum_probs=186.7
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||++.. ++..+|+|.+.. .+.+|++++++++|+||++++++|.+++..++||||+++|+|.+++....
T Consensus 19 g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 98 (333)
T cd06650 19 GVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 98 (333)
T ss_pred EEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcC
Confidence 89999988 578899998753 25689999999999999999999999999999999999999999996543
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
.+++.....++.+++.||.|||+. .+++||||||+||+++.++.+||+|||++....... .....|+..|+
T Consensus 99 --~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~y~ 169 (333)
T cd06650 99 --RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYM 169 (333)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc-----cccCCCCcccc
Confidence 388999999999999999999972 359999999999999999999999999987543221 12346899999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc------------------------
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG------------------------ 567 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~------------------------ 567 (635)
|||++.+..++.++|||||||++|||++|+.||......... ............
T Consensus 170 aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (333)
T cd06650 170 SPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE--LMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRP 247 (333)
T ss_pred CHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH--HHhcCcccCCccccccCcccCCccchhhhhcccccc
Confidence 999999888999999999999999999999998643322111 110000000000
Q ss_pred ----hhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhh
Q 042486 568 ----EESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 568 ----~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 622 (635)
......+.............+..+.+|+.+||+.||++||+++|++++ .++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h--~~~~~ 304 (333)
T cd06650 248 PMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH--AFIKR 304 (333)
T ss_pred cccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC--HHHhc
Confidence 000000000000000011234568999999999999999999999876 45543
No 54
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.3e-35 Score=307.48 Aligned_cols=226 Identities=24% Similarity=0.351 Sum_probs=183.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||+|.+..+ +.+|++++++++||||+++++++..++..++||||+++|+|.+++..
T Consensus 9 g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~ 88 (328)
T cd05593 9 GKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSR 88 (328)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHh
Confidence 89999987 6889999998642 34688999999999999999999999999999999999999998865
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .......||+.
T Consensus 89 ~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~---~~~~~~~gt~~ 160 (328)
T cd05593 89 ER--VFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA---ATMKTFCGTPE 160 (328)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCcc---cccccccCCcC
Confidence 43 3899999999999999999999854 9999999999999999999999999987532211 11233578999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.+..++.++|||||||++|||++|+.||...+... .... +... ....+...+.
T Consensus 161 y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~--~~~~----------------~~~~--~~~~p~~~~~ 220 (328)
T cd05593 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFEL----------------ILME--DIKFPRTLSA 220 (328)
T ss_pred ccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH--HHHH----------------hccC--CccCCCCCCH
Confidence 999999998889999999999999999999999985432211 1000 0000 0112333455
Q ss_pred HHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
.+.+++.+||+.||++|| ++.|++++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 689999999999999997 89999876
No 55
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.8e-35 Score=300.25 Aligned_cols=244 Identities=22% Similarity=0.313 Sum_probs=183.1
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+++. +++.||+|+++. .+.+|++++++++|+||+++++++..++..++||||++++.+..+....
T Consensus 15 ~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~ 94 (287)
T cd07848 15 GVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMP 94 (287)
T ss_pred EEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcC
Confidence 89999998 578999998753 2457999999999999999999999999999999999987776554332
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........ .......|+..|
T Consensus 95 --~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y 167 (287)
T cd07848 95 --NGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN--ANYTEYVATRWY 167 (287)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccccccccc--cccccccccccc
Confidence 34899999999999999999999854 99999999999999999999999999986543221 112235689999
Q ss_pred cCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhh---------hhcCCcCC-
Q 042486 511 MAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLR---------HLMDPSMQ- 580 (635)
Q Consensus 511 ~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~---------~~~d~~~~- 580 (635)
+|||++.+..++.++|||||||++|||++|+.||......... .. +....... ..+... ....+...
T Consensus 168 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~-~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 244 (287)
T cd07848 168 RSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQL-FT-IQKVLGPL-PAEQMKLFYSNPRFHGLRFPAVNH 244 (287)
T ss_pred CCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHH-HH-HHHhhCCC-CHHHHHhhhccchhcccccCcccC
Confidence 9999999888999999999999999999999988654332211 10 00000000 000000 00000000
Q ss_pred -----CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 581 -----GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 581 -----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+....+..+.+|+.+||+.||++|||++|+++|
T Consensus 245 ~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 245 PQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 01111234568999999999999999999999864
No 56
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-36 Score=303.87 Aligned_cols=227 Identities=26% Similarity=0.412 Sum_probs=188.1
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||||.+ .++.||+|.+.- +..+|+.+|.+++++||.+++|.+..+..++++|||+.||++.+.++...
T Consensus 27 G~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~ 106 (467)
T KOG0201|consen 27 GEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGN 106 (467)
T ss_pred ceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCC
Confidence 99999998 688999999853 35579999999999999999999999999999999999999999996543
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
.+++..+.-|+++++.||.|||..+ .+|||||+.|||+..+|.+||+|||.+-...... .....++||+.||
T Consensus 107 --~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~---~rr~tfvGTPfwM 178 (467)
T KOG0201|consen 107 --ILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV---KRRKTFVGTPFWM 178 (467)
T ss_pred --CCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh---hcccccccccccc
Confidence 2578888889999999999999955 9999999999999999999999999997665433 2235689999999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHH
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l 591 (635)
|||++....|+.|+||||||++.+||.+|.+|+....... + .-.+.+-.-|.+.+ ..+..+
T Consensus 179 APEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr---------v------lflIpk~~PP~L~~----~~S~~~ 239 (467)
T KOG0201|consen 179 APEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR---------V------LFLIPKSAPPRLDG----DFSPPF 239 (467)
T ss_pred chhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce---------E------EEeccCCCCCcccc----ccCHHH
Confidence 9999998899999999999999999999999975322210 0 01111111223322 445569
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+++..||+.||+.||++.++++|
T Consensus 240 kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 240 KEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HHHHHHHhhcCcccCcCHHHHhhh
Confidence 999999999999999999999876
No 57
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.1e-36 Score=278.79 Aligned_cols=236 Identities=26% Similarity=0.363 Sum_probs=197.3
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEe
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVY 415 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 415 (635)
++|+.+..+| |.||.|+. ++..||+|++.. ++.+|+++-+.|+||||++++++|.+....||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 4555555555 89999988 677999998854 3568999999999999999999999999999999
Q ss_pred ecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccC
Q 042486 416 ENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQE 495 (635)
Q Consensus 416 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 495 (635)
||..+|.|...|.......+++.....++.|+|.||.|+|. ++++||||||+|+|++.++.+||+|||-+.....
T Consensus 102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~-- 176 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-- 176 (281)
T ss_pred EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecCC--
Confidence 99999999999986666668999999999999999999998 5599999999999999999999999998865432
Q ss_pred CceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhc
Q 042486 496 GEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLM 575 (635)
Q Consensus 496 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 575 (635)
......+||..|.+||...+...+...|+|++|++.||++.|.+||.....+ +..+++.
T Consensus 177 ---~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~------------------etYkrI~ 235 (281)
T KOG0580|consen 177 ---NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS------------------ETYKRIR 235 (281)
T ss_pred ---CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH------------------HHHHHHH
Confidence 1234578999999999999999999999999999999999999998654321 1222221
Q ss_pred CCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 576 DPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 576 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.- .-.+|...+....++|.+|+..+|.+|.+..|++++
T Consensus 236 k~--~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 236 KV--DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred Hc--cccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 11 112345556668999999999999999999999987
No 58
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.9e-35 Score=307.15 Aligned_cols=226 Identities=25% Similarity=0.348 Sum_probs=183.3
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||+|.++.+ +.+|++++++++||||+++++.+..++..|+||||+++|+|.+++..
T Consensus 9 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~ 88 (323)
T cd05595 9 GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 88 (323)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHH
Confidence 89999987 6889999998642 34688999999999999999999999999999999999999988865
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....... .......||+.
T Consensus 89 ~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~ 160 (323)
T cd05595 89 ER--VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPE 160 (323)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC---CccccccCCcC
Confidence 43 3899999999999999999999855 9999999999999999999999999987532211 11223568999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.+..++.++|||||||++|||++|+.||...+.... ...+.... ...+...+.
T Consensus 161 y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~------------------~~~~~~~~--~~~p~~~~~ 220 (323)
T cd05595 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL------------------FELILMEE--IRFPRTLSP 220 (323)
T ss_pred cCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH------------------HHHHhcCC--CCCCCCCCH
Confidence 9999999988999999999999999999999999854322211 11111111 012333455
Q ss_pred HHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
.+.+++.+||+.||++|| ++.+++++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 221 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 689999999999999998 88888875
No 59
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.3e-34 Score=298.06 Aligned_cols=242 Identities=24% Similarity=0.446 Sum_probs=190.4
Q ss_pred ceEEEeee-------CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI-------GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~-------~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+++. ++..+|+|.+.. ++.+|++++++++|+||+++++++...+..++||||+++++|.+++
T Consensus 19 ~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i 98 (288)
T cd05093 19 GKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 98 (288)
T ss_pred eeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHH
Confidence 89999974 235689998854 3567999999999999999999999999999999999999999998
Q ss_pred cccC-----------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCC
Q 042486 428 NDKG-----------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496 (635)
Q Consensus 428 ~~~~-----------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 496 (635)
.... ...+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 175 (288)
T cd05093 99 RAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY 175 (288)
T ss_pred HHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEeccCCccccccCCce
Confidence 5322 234899999999999999999999854 99999999999999999999999999875533221
Q ss_pred ceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhc
Q 042486 497 EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLM 575 (635)
Q Consensus 497 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 575 (635)
........++..|+|||.+.+..++.++||||||+++|||++ |..||....... ... .+.
T Consensus 176 -~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~----------------~i~ 236 (288)
T cd05093 176 -YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIE----------------CIT 236 (288)
T ss_pred -eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH----------------HHH
Confidence 111223445778999999998889999999999999999999 787765332211 111 111
Q ss_pred CCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcccc
Q 042486 576 DPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAW 626 (635)
Q Consensus 576 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w 626 (635)
.... ...+...+..+.+++.+||+.||.+||+++|+++.|+++...+..|
T Consensus 237 ~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~~~~ 286 (288)
T cd05093 237 QGRV-LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASPVY 286 (288)
T ss_pred cCCc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhcccc
Confidence 1000 0111123345899999999999999999999999999999887665
No 60
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.6e-34 Score=292.13 Aligned_cols=233 Identities=24% Similarity=0.420 Sum_probs=183.7
Q ss_pred ceEEEeee----CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI----GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~----~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|.+ ++..+|+|.++. ++.+|+.++++++|+||+++++++. ++.+++||||+++|+|.+++.
T Consensus 9 g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~ 87 (257)
T cd05116 9 GTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQ 87 (257)
T ss_pred cceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHH
Confidence 89999965 567899998753 2457899999999999999999885 456799999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++.................++.
T Consensus 88 ~~~--~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~ 162 (257)
T cd05116 88 KNK--HVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPV 162 (257)
T ss_pred hcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCc
Confidence 543 3899999999999999999999854 99999999999999999999999999986544332111112233457
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
.|+|||.+....++.++||||||+++|||++ |+.||...... .....+. .......+...
T Consensus 163 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~-----------------~~~~~~~~~~~ 223 (257)
T cd05116 163 KWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIE-----------------SGERMECPQRC 223 (257)
T ss_pred cccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH-----------------CCCCCCCCCCC
Confidence 8999999988889999999999999999998 88887543221 1111111 11111223334
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
+..+.+++.+||+.||++||++.+|.+.|+..
T Consensus 224 ~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 224 PPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 56689999999999999999999999999865
No 61
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.5e-35 Score=300.91 Aligned_cols=246 Identities=22% Similarity=0.341 Sum_probs=182.0
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|.. +++.||+|.++. .+.+|++++++++|+||+++++++..++..++||||+++ +|.+++....
T Consensus 19 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~ 97 (288)
T cd07871 19 ATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCG 97 (288)
T ss_pred EEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcC
Confidence 89999987 688999998753 245899999999999999999999999999999999975 8998886543
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....... ......++..|+
T Consensus 98 -~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~---~~~~~~~~~~y~ 170 (288)
T cd07871 98 -NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK---TYSNEVVTLWYR 170 (288)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCCc---cccCceeccccc
Confidence 34789999999999999999999854 99999999999999999999999999875432221 122346789999
Q ss_pred Ccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhH--HHHhhhcccc----cCCchhhhhhhcCCcCCCC--
Q 042486 512 APEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENML--LVDVLNPVLH----KEDGEESLRHLMDPSMQGN-- 582 (635)
Q Consensus 512 aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~--l~~~~~~~~~----~~~~~~~l~~~~d~~~~~~-- 582 (635)
|||.+.+ ..++.++|||||||++|||++|+.||......+.. .......... .-...+.......+.....
T Consensus 171 aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (288)
T cd07871 171 PPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPL 250 (288)
T ss_pred ChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCch
Confidence 9998865 56899999999999999999999998654322211 1111000000 0000011111111111100
Q ss_pred --CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 583 --YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 583 --~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.....+....+|+.+||+.||.+|||++|+++|
T Consensus 251 ~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 251 INHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred HHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 011224457899999999999999999999865
No 62
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.3e-34 Score=292.56 Aligned_cols=230 Identities=27% Similarity=0.440 Sum_probs=182.1
Q ss_pred ceEEEeee-CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||++.+ ++..+|+|.++. ++.+|+++|++++|+||+++++++..++..++||||+++|+|.+++..... .
T Consensus 18 ~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~ 96 (256)
T cd05114 18 GVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQG-K 96 (256)
T ss_pred ceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCcc-C
Confidence 79999988 456899998754 356799999999999999999999999999999999999999999865433 3
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||.++....... .......++..|+|||
T Consensus 97 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~y~aPE 171 (256)
T cd05114 97 LSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--TSSSGAKFPVKWSPPE 171 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCce--eccCCCCCchhhCChh
Confidence 899999999999999999999854 99999999999999999999999999875532211 1112233556899999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
.+.+..++.++||||||+++|||++ |+.||....... ....+.. .. ....+...+..+.+
T Consensus 172 ~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~--~~~~i~~----------------~~-~~~~~~~~~~~~~~ 232 (256)
T cd05114 172 VFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE--VVEMISR----------------GF-RLYRPKLASMTVYE 232 (256)
T ss_pred hcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHC----------------CC-CCCCCCCCCHHHHH
Confidence 9988889999999999999999999 887875332211 1111110 00 00112223456899
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L 616 (635)
++.+||+.||++||+++|+++.|
T Consensus 233 li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 233 VMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHccCCcccCcCHHHHHHhh
Confidence 99999999999999999999886
No 63
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.9e-34 Score=291.22 Aligned_cols=229 Identities=29% Similarity=0.505 Sum_probs=187.6
Q ss_pred ceEEEeeeCCcEEEEEEeccC------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCC
Q 042486 362 GSVYRGKIGGDFVAIKKVYGD------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFL 435 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~~------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l 435 (635)
|.||++...++.||+|.++.+ +.+|+.++++++|+||+++++++.+.+..++||||+++++|.+++.......+
T Consensus 20 g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~ 99 (256)
T cd05039 20 GDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVI 99 (256)
T ss_pred ceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCC
Confidence 899999999999999998764 44689999999999999999999988899999999999999999976554469
Q ss_pred CHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccc
Q 042486 436 DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEY 515 (635)
Q Consensus 436 ~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~ 515 (635)
++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||.++....... ....+..|+|||+
T Consensus 100 ~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~------~~~~~~~~~ape~ 170 (256)
T cd05039 100 TLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD------SGKLPVKWTAPEA 170 (256)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccc------cCCCcccccCchh
Confidence 99999999999999999999855 99999999999999999999999999986532211 2234567999999
Q ss_pred cccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHH
Q 042486 516 LENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRL 594 (635)
Q Consensus 516 ~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~l 594 (635)
+..+.++.++||||||+++|||++ |+.||....... +...... ......+...+..+.++
T Consensus 171 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~~l 231 (256)
T cd05039 171 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPHVEK-----------------GYRMEAPEGCPPEVYKV 231 (256)
T ss_pred hcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHhc-----------------CCCCCCccCCCHHHHHH
Confidence 998889999999999999999997 888875432211 1111110 00111222334568999
Q ss_pred HHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 595 IESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 595 i~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
+.+||..+|++||+++|+++.|+.
T Consensus 232 i~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 232 MKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred HHHHhccChhhCcCHHHHHHHHhc
Confidence 999999999999999999999975
No 64
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=310.32 Aligned_cols=237 Identities=28% Similarity=0.482 Sum_probs=192.9
Q ss_pred ceEEEeee---CC--cE-EEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI---GG--DF-VAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~---~~--~~-vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
|.||+|++ ++ .. ||||..+. ++.+|.++|++++|+|||+++|++..+..+++|||+|.||+|.+
T Consensus 171 GeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~ 250 (474)
T KOG0194|consen 171 GEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDD 250 (474)
T ss_pred cEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHH
Confidence 99999988 22 23 89998874 25689999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeec-cc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS-HI 504 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~-~~ 504 (635)
+|+..+. .++..+++.++.+.|.||+|||+. +++||||..+|+|++.++.+||+|||+++..... .... ..
T Consensus 251 ~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~----~~~~~~~ 322 (474)
T KOG0194|consen 251 YLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY----VMKKFLK 322 (474)
T ss_pred HHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCcce----eeccccc
Confidence 9987654 499999999999999999999994 4999999999999999999999999998755421 1111 22
Q ss_pred ccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCC
Q 042486 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNY 583 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~ 583 (635)
.-...|+|||.+..+.+++++|||||||++||+++ |..|+...... +....+.....+...
T Consensus 323 klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~------------------~v~~kI~~~~~r~~~ 384 (474)
T KOG0194|consen 323 KLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY------------------EVKAKIVKNGYRMPI 384 (474)
T ss_pred cCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH------------------HHHHHHHhcCccCCC
Confidence 34568999999999999999999999999999999 67776432221 111112122222334
Q ss_pred ChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcc
Q 042486 584 PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASL 624 (635)
Q Consensus 584 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~ 624 (635)
+...+..+..++.+||..||++||+|.++.+.|+.+.....
T Consensus 385 ~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 385 PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred CCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 44566678999999999999999999999999999987654
No 65
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.5e-34 Score=293.93 Aligned_cols=236 Identities=25% Similarity=0.412 Sum_probs=185.1
Q ss_pred ceEEEeee--CCc---EEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGD---FVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~---~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. ++. .+|+|.++.. +.+|++++++++|+||+++.+++.+.+..++||||+++++|.+++.
T Consensus 19 g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 98 (268)
T cd05063 19 GEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLR 98 (268)
T ss_pred ccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHH
Confidence 79999987 333 7999988643 4568999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... ..+++.++..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++..................+.
T Consensus 99 ~~~-~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 174 (268)
T cd05063 99 DHD-GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPI 174 (268)
T ss_pred hcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCc
Confidence 543 34899999999999999999999854 99999999999999999999999999876543322111111223345
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
.|+|||++.+..++.++||||||+++|||++ |+.|+....... ....+. . ......+...
T Consensus 175 ~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~--~~~~i~----------------~-~~~~~~~~~~ 235 (268)
T cd05063 175 RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE--VMKAIN----------------D-GFRLPAPMDC 235 (268)
T ss_pred eecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHHHHh----------------c-CCCCCCCCCC
Confidence 7999999988889999999999999999998 998875322211 111111 0 0111112233
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
+..+.+++.+||+.+|++||++.+|++.|.+++
T Consensus 236 ~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 236 PSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 456899999999999999999999999998763
No 66
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.8e-34 Score=293.07 Aligned_cols=236 Identities=24% Similarity=0.316 Sum_probs=187.6
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+|+. +++.||||.++. ++.+|++++++++||||+++++++.+.+..++++||+++|+|.+++..
T Consensus 16 ~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 95 (267)
T cd08228 16 SEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKY 95 (267)
T ss_pred eeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHH
Confidence 79999987 789999997642 246799999999999999999999999999999999999999998843
Q ss_pred --cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 430 --KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 430 --~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........ ......++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~ 169 (267)
T cd08228 96 FKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT---AAHSLVGT 169 (267)
T ss_pred hhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccchhH---HHhcCCCC
Confidence 2234488999999999999999999985 499999999999999999999999999876543221 11234688
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
..|+|||.+.+..++.++|+||||+++|||++|+.|+.............+. ........+...
T Consensus 170 ~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~ 233 (267)
T cd08228 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE----------------QCDYPPLPTEHY 233 (267)
T ss_pred ccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh----------------cCCCCCCChhhc
Confidence 8999999998888899999999999999999999997532211111111110 001111112234
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
+..+.+++.+||+.+|++||++.|+++.|+.+
T Consensus 234 ~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 234 SEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 56689999999999999999999999999875
No 67
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-34 Score=297.81 Aligned_cols=235 Identities=23% Similarity=0.444 Sum_probs=184.7
Q ss_pred ceEEEeee------CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI------GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~------~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|.. .+..||+|.++. ++.+|++++++++|+||+++++++..++..++||||+++++|.+++
T Consensus 19 g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l 98 (283)
T cd05090 19 GKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFL 98 (283)
T ss_pred cceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHH
Confidence 89999974 457899999863 3567999999999999999999999999999999999999999998
Q ss_pred cccC---------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccc
Q 042486 428 NDKG---------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492 (635)
Q Consensus 428 ~~~~---------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 492 (635)
.... ...+++.+.+.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~ 175 (283)
T cd05090 99 IMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIY 175 (283)
T ss_pred HhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCCcEEecccccccccc
Confidence 4221 134789999999999999999999854 9999999999999999999999999997654
Q ss_pred ccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhh
Q 042486 493 RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESL 571 (635)
Q Consensus 493 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l 571 (635)
..... .......++..|+|||++.+..++.++||||||+++|||++ |..||...... ...+....
T Consensus 176 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~----------- 241 (283)
T cd05090 176 SADYY-RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--EVIEMVRK----------- 241 (283)
T ss_pred CCcce-ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc-----------
Confidence 32211 11233445678999999988889999999999999999999 87776432211 11111110
Q ss_pred hhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 572 RHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 572 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
......+...+..+.+++.+||+.||++||++.+|.++|.+|
T Consensus 242 ------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05090 242 ------RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRSW 283 (283)
T ss_pred ------CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhcC
Confidence 000112223345689999999999999999999999998754
No 68
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.2e-34 Score=300.52 Aligned_cols=245 Identities=24% Similarity=0.287 Sum_probs=180.4
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|+. +++.||||.++. .+.+|+.++++++|+||+++++++.+++..++||||+. ++|.+++....
T Consensus 19 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~ 97 (303)
T cd07869 19 ATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHP 97 (303)
T ss_pred EEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCC
Confidence 89999998 688999998853 24579999999999999999999999999999999995 68888775433
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....... ......+++.|+
T Consensus 98 -~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~ 170 (303)
T cd07869 98 -GGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH---TYSNEVVTLWYR 170 (303)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCCc---cCCCCcccCCCC
Confidence 33889999999999999999999855 99999999999999999999999999875432211 122346789999
Q ss_pred Ccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc-----hhhhhhhcCCcCCCCCCh
Q 042486 512 APEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG-----EESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 512 aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-----~~~l~~~~d~~~~~~~~~ 585 (635)
|||.+.+ ..++.++|||||||++|||++|+.||....+....+...... ...... ......+.........+.
T Consensus 171 aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T cd07869 171 PPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLV-LGTPNEDTWPGVHSLPHFKPERFTLYSPK 249 (303)
T ss_pred ChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHH-hCCCChhhccchhhccccccccccccCCc
Confidence 9998865 457889999999999999999999987543322222111110 000000 000000000000000000
Q ss_pred ---------HHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 586 ---------VTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 586 ---------~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.....+.+|+.+||+.||++|||++|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 250 NLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 012457899999999999999999999875
No 69
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.9e-34 Score=292.22 Aligned_cols=240 Identities=20% Similarity=0.292 Sum_probs=187.8
Q ss_pred CCCCCCccc----ceEEEeee--CCcEEEEEEecc------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEE
Q 042486 353 DFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLV 414 (635)
Q Consensus 353 ~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 414 (635)
+|.....+| |.||++.. +++.+|+|.+.. .+.+|++++++++|+||+++++++.+++..++|
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence 344444444 79999976 688999998742 245689999999999999999999999999999
Q ss_pred eecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 415 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
+||+++++|.+++.... .+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++.....
T Consensus 83 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 83 MEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 99999999999986543 3889999999999999999999855 999999999999999999999999998754332
Q ss_pred CCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhh
Q 042486 495 EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL 574 (635)
Q Consensus 495 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 574 (635)
...........++..|+|||.+.+..++.++||||||+++|||++|+.||...+.... ....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------------------~~~~ 219 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA------------------IFKI 219 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH------------------HHHH
Confidence 1111111234577899999999988899999999999999999999998753221110 0111
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 575 MDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 575 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.........+......+.+++.+||..+|++||++.|++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 220 ATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred hccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11111122333445568999999999999999999999875
No 70
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.7e-34 Score=297.68 Aligned_cols=238 Identities=24% Similarity=0.457 Sum_probs=188.4
Q ss_pred ceEEEeee-------CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI-------GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~-------~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+++. ++..+++|.++. .+.+|++++++++|+||+++++++..++..++||||+++++|.+++
T Consensus 19 g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i 98 (291)
T cd05094 19 GKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 98 (291)
T ss_pred CeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHH
Confidence 89999975 245689998864 3567899999999999999999999999999999999999999998
Q ss_pred cccC--------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccc
Q 042486 428 NDKG--------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAER 493 (635)
Q Consensus 428 ~~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 493 (635)
.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~ 175 (291)
T cd05094 99 RAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYS 175 (291)
T ss_pred HhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEECCCCcccccCC
Confidence 5432 134899999999999999999999854 99999999999999999999999999875543
Q ss_pred cCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhh
Q 042486 494 QEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLR 572 (635)
Q Consensus 494 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~ 572 (635)
... ........++..|+|||++.+..++.++||||||+++|||++ |+.|+....... ..+.
T Consensus 176 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~--------------- 237 (291)
T cd05094 176 TDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIEC--------------- 237 (291)
T ss_pred Cce-eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH---------------
Confidence 221 112233456788999999998889999999999999999999 888875432221 1111
Q ss_pred hhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhh
Q 042486 573 HLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 573 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 622 (635)
+..... ...+...+..+.+++.+||+.||++||+++++++.|+++...
T Consensus 238 -~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 238 -ITQGRV-LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred -HhCCCC-CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 111000 011222345689999999999999999999999999998764
No 71
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.5e-35 Score=308.59 Aligned_cols=223 Identities=24% Similarity=0.300 Sum_probs=181.7
Q ss_pred ceEEEeeeC---CcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKIG---GDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~~---~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++.. +..||+|++.. .+.+|+.++++++||||+++++++.+++..|+||||+++|+|.+++.
T Consensus 44 g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~ 123 (340)
T PTZ00426 44 GRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLR 123 (340)
T ss_pred eEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHH
Confidence 899999862 35899998743 24469999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .....||+
T Consensus 124 ~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~------~~~~~gt~ 192 (340)
T PTZ00426 124 RNK--RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR------TYTLCGTP 192 (340)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCCC------cceecCCh
Confidence 543 3899999999999999999999855 999999999999999999999999999765322 12357899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||...+... . ...+.... ..++...+
T Consensus 193 ~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--~----------------~~~i~~~~--~~~p~~~~ 252 (340)
T PTZ00426 193 EYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL--I----------------YQKILEGI--IYFPKFLD 252 (340)
T ss_pred hhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH--H----------------HHHHhcCC--CCCCCCCC
Confidence 9999999998889999999999999999999999986432211 0 11111111 11233344
Q ss_pred HHHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
..+.+++++||+.||++|+ +++|++++
T Consensus 253 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 253 NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 5578999999999999995 89988876
No 72
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.8e-34 Score=290.74 Aligned_cols=232 Identities=26% Similarity=0.461 Sum_probs=182.5
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|+. +++.+|+|.... .+.+|++++++++|+||+++++++...+..++||||+++++|.+++....
T Consensus 9 g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~ 88 (252)
T cd05084 9 GEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG 88 (252)
T ss_pred ccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCC
Confidence 89999987 788999998753 25679999999999999999999999999999999999999999996543
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......... ........+..|+
T Consensus 89 -~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~ 163 (252)
T cd05084 89 -PRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA-STGGMKQIPVKWT 163 (252)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCccccccccc-ccCCCCCCceeec
Confidence 34899999999999999999999854 999999999999999999999999998754321110 0011112345699
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHH
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~ 590 (635)
|||.+.++.++.++||||||+++|||++ |..|+....... ... ..........+...+..
T Consensus 164 aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~-----------------~~~~~~~~~~~~~~~~~ 224 (252)
T cd05084 164 APEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TRE-----------------AIEQGVRLPCPELCPDA 224 (252)
T ss_pred CchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHH-----------------HHHcCCCCCCcccCCHH
Confidence 9999998889999999999999999998 777764322111 000 00011111223334556
Q ss_pred HHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 591 VIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 591 l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
+.+++.+||+.||++||++.|+++.|+
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 899999999999999999999999875
No 73
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.7e-34 Score=293.73 Aligned_cols=249 Identities=23% Similarity=0.340 Sum_probs=188.3
Q ss_pred ceEEEeee------CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecC--CeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI------GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNG--GNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~------~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~ 425 (635)
|.||.+.+ ++..||+|.++.. +.+|+++|++++|+||+++++++... ...+++|||+++++|.+
T Consensus 18 g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~ 97 (283)
T cd05080 18 GKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRD 97 (283)
T ss_pred cEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHH
Confidence 78977653 5678999988642 35799999999999999999998753 35799999999999999
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++... .+++.++..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++................
T Consensus 98 ~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 171 (283)
T cd05080 98 YLPKH---KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 171 (283)
T ss_pred HHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCC
Confidence 99653 289999999999999999999985 499999999999999999999999999986543322111122234
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
++..|+|||.+.+..++.++||||||+++|||++|+.|+............. ... ......+....+.......+.
T Consensus 172 ~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~ 247 (283)
T cd05080 172 SPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGP---KQG-QMTVVRLIELLERGMRLPCPK 247 (283)
T ss_pred CCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcc---ccc-ccchhhhhhhhhcCCCCCCCC
Confidence 5667999999988889999999999999999999999875432221111111 000 011111222222222223344
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
..+..+.+++.+||+.||++||+++++++.|+++.
T Consensus 248 ~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 248 NCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 45567999999999999999999999999998864
No 74
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.8e-34 Score=294.20 Aligned_cols=240 Identities=27% Similarity=0.415 Sum_probs=184.3
Q ss_pred ceEEEeee--CCc----EEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGD----FVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~----~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|++ +++ .+++|.+... +.+|+..+++++|+||+++++++. +...++++||+++|+|.+++
T Consensus 21 ~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l 99 (279)
T cd05111 21 GTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHV 99 (279)
T ss_pred cceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHH
Confidence 89999998 454 4788877532 345677888999999999999885 45578999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.... ..+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++........ .......++
T Consensus 100 ~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~ 174 (279)
T cd05111 100 RQHR-DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKK-YFYSEHKTP 174 (279)
T ss_pred Hhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccCCCcc-cccCCCCCc
Confidence 6543 3489999999999999999999984 4999999999999999999999999999765432211 112234567
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
..|+|||.+.++.++.++||||||+++|||++ |+.|+....... ..+... .......+..
T Consensus 175 ~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~~~-----------------~~~~~~~~~~ 235 (279)
T cd05111 175 IKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VPDLLE-----------------KGERLAQPQI 235 (279)
T ss_pred ccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH-----------------CCCcCCCCCC
Confidence 78999999998889999999999999999998 888875332211 111111 0000011112
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcccc
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAW 626 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w 626 (635)
....+.+++.+||..||++||++.|+++.|..+...+-.|
T Consensus 236 ~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~~~ 275 (279)
T cd05111 236 CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPPRY 275 (279)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCcce
Confidence 2345788999999999999999999999999988765443
No 75
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.8e-34 Score=293.08 Aligned_cols=237 Identities=24% Similarity=0.323 Sum_probs=189.1
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||++.. +++.+|||.+.. ++.+|+.++++++|+||+++++++..++..+++|||+++++|.+++..
T Consensus 16 g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 95 (267)
T cd08229 16 SEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH 95 (267)
T ss_pred eEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHH
Confidence 89999986 788999997642 355789999999999999999999999999999999999999999853
Q ss_pred --cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 430 --KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 430 --~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........ ......++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~ 169 (267)
T cd08229 96 FKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT---AAHSLVGT 169 (267)
T ss_pred hhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhccccCCc---ccccccCC
Confidence 22345899999999999999999999854 99999999999999999999999999876543221 11234688
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
..|+|||.+.+..++.++|+||||+++|+|++|..||.....+...... .+.........+...
T Consensus 170 ~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~ 233 (267)
T cd08229 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK----------------KIEQCDYPPLPSDHY 233 (267)
T ss_pred cCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh----------------hhhcCCCCCCCcccc
Confidence 8999999998888999999999999999999999997532221111110 111111111112235
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
+..+.+++.+||+.||++|||+.+|++.++++.
T Consensus 234 ~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 234 SEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred cHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 566999999999999999999999999999874
No 76
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.7e-34 Score=290.67 Aligned_cols=235 Identities=22% Similarity=0.393 Sum_probs=183.0
Q ss_pred ceEEEeee----CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI----GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~----~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+|++ .+..||+|.+... +.+|+.++++++|+||+++++++. .+..++||||+++++|.+++..
T Consensus 9 g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~ 87 (257)
T cd05115 9 GCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSG 87 (257)
T ss_pred ccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHh
Confidence 89999976 2456999988542 457899999999999999999885 4567999999999999999864
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. ..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.................++..
T Consensus 88 ~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 163 (257)
T cd05115 88 KK-DEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLK 163 (257)
T ss_pred CC-CCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcc
Confidence 33 34899999999999999999999854 999999999999999999999999998755433221111122233578
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
|+|||.+.+..++.++||||||+++|||++ |..||....... ....+ ........+...+
T Consensus 164 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~-----------------~~~~~~~~~~~~~ 224 (257)
T cd05115 164 WYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--VMSFI-----------------EQGKRLDCPAECP 224 (257)
T ss_pred cCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHH-----------------HCCCCCCCCCCCC
Confidence 999999988889999999999999999996 888875332211 11111 0111112233445
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
..+.+++.+||..||++||++.+|.+.|+.+.
T Consensus 225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 225 PEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 66899999999999999999999999998763
No 77
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.7e-34 Score=297.34 Aligned_cols=245 Identities=25% Similarity=0.378 Sum_probs=179.3
Q ss_pred ceEEEeee---CCcEEEEEEecc---------ChHHHHHHHhhh---ccCCcccEEEEEec-----CCeeEEEeecccCC
Q 042486 362 GSVYRGKI---GGDFVAIKKVYG---------DASDQIKLLNKI---NHSSLIRLLGICFN-----GGNWYLVYENAVNG 421 (635)
Q Consensus 362 g~Vy~g~~---~~~~vavK~~~~---------~~~~E~~~l~~l---~h~nIv~l~~~~~~-----~~~~~lV~E~~~~g 421 (635)
|.||+++. +++.||+|+++. .+.+|+.+++++ +||||++++++|.. ....++||||+. +
T Consensus 15 g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~ 93 (290)
T cd07862 15 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-Q 93 (290)
T ss_pred eEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-C
Confidence 89999986 467899998753 234677777766 69999999999862 345899999996 6
Q ss_pred CcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeee
Q 042486 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT 501 (635)
Q Consensus 422 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 501 (635)
+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 94 ~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~ 166 (290)
T cd07862 94 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ----MAL 166 (290)
T ss_pred CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccceEeccCC----ccc
Confidence 8999986655455899999999999999999999854 999999999999999999999999998755432 122
Q ss_pred cccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhccc--ccCCchhhh---hhhcC
Q 042486 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVL--HKEDGEESL---RHLMD 576 (635)
Q Consensus 502 ~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~--~~~~~~~~l---~~~~d 576 (635)
....|+..|+|||.+.+..++.++|||||||++|||++|+.||....+.+ .+........ ...+..... .....
T Consensus 167 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 245 (290)
T cd07862 167 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDWPRDVALPRQAFH 245 (290)
T ss_pred ccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhchhhhcccchhcc
Confidence 34568999999999988889999999999999999999999886543322 1111111100 000000000 00000
Q ss_pred CcCC---CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 577 PSMQ---GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 577 ~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+... ....+..+..+.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 246 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred CCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0000 00111234557899999999999999999999864
No 78
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.2e-34 Score=298.50 Aligned_cols=245 Identities=24% Similarity=0.416 Sum_probs=190.6
Q ss_pred CCCCCCccc----ceEEEeee-------CCcEEEEEEeccC--------hHHHHHHHhhh-ccCCcccEEEEEecCCeeE
Q 042486 353 DFNPSCWIK----GSVYRGKI-------GGDFVAIKKVYGD--------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWY 412 (635)
Q Consensus 353 ~f~~~~~ig----g~Vy~g~~-------~~~~vavK~~~~~--------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 412 (635)
+|.....|| |.||++.. .+..||||.++.. +.+|+++++++ +|+||+++++++...+..+
T Consensus 36 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 115 (302)
T cd05055 36 NLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPIL 115 (302)
T ss_pred HeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceE
Confidence 344444444 78999864 2447999987642 55799999999 7999999999999999999
Q ss_pred EEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccc
Q 042486 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492 (635)
Q Consensus 413 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 492 (635)
++|||+.+|+|.+++.......+++.++..++.+++.||.|||+. +++|+||||+||+++.++.++|+|||+++...
T Consensus 116 lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 192 (302)
T cd05055 116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARDIM 192 (302)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccccccc
Confidence 999999999999999765444589999999999999999999985 49999999999999999999999999987554
Q ss_pred ccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhh
Q 042486 493 RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESL 571 (635)
Q Consensus 493 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l 571 (635)
.... ........++..|+|||.+.+..++.++||||||+++|||++ |+.|+....... ....
T Consensus 193 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~--------------- 255 (302)
T cd05055 193 NDSN-YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYK--------------- 255 (302)
T ss_pred CCCc-eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHH---------------
Confidence 3221 112223356778999999998889999999999999999998 888865322211 1111
Q ss_pred hhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 572 RHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 572 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
..+.......+...+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 256 --~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 256 --LIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred --HHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1111111111222345689999999999999999999999999875
No 79
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.6e-34 Score=296.08 Aligned_cols=239 Identities=27% Similarity=0.441 Sum_probs=187.4
Q ss_pred ceEEEeeeC-------CcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIG-------GDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~-------~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|+.. ...+|+|.+.. ++.+|++++++++||||+++++.+..++..++++||+.+++|.++
T Consensus 14 g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 93 (290)
T cd05045 14 GKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSF 93 (290)
T ss_pred cceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHH
Confidence 899999862 24688888753 245799999999999999999999999999999999999999998
Q ss_pred hccc----------------------CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEee
Q 042486 427 INDK----------------------GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIAN 484 (635)
Q Consensus 427 l~~~----------------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 484 (635)
+... ....+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|
T Consensus 94 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~nill~~~~~~kl~d 170 (290)
T cd05045 94 LRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARNVLVAEGRKMKISD 170 (290)
T ss_pred HHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhheEEEcCCCcEEecc
Confidence 7431 1134889999999999999999999854 99999999999999999999999
Q ss_pred ecCcccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccc
Q 042486 485 FALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLH 563 (635)
Q Consensus 485 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~ 563 (635)
||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .+.+...
T Consensus 171 fg~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~---- 243 (290)
T cd05045 171 FGLSRDVYEEDSY-VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE--RLFNLLK---- 243 (290)
T ss_pred ccccccccCccch-hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHh----
Confidence 9998754322211 11122345678999999988889999999999999999998 88887533221 1111111
Q ss_pred cCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 564 ~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
.......+...+..+.+++.+||+.||++||++.|+++.|++++..+
T Consensus 244 -------------~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~~ 290 (290)
T cd05045 244 -------------TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVKS 290 (290)
T ss_pred -------------CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhcC
Confidence 11111222334456899999999999999999999999999998753
No 80
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.2e-34 Score=290.90 Aligned_cols=230 Identities=27% Similarity=0.463 Sum_probs=184.6
Q ss_pred ceEEEeeeCCcEEEEEEeccC-----hHHHHHHHhhhccCCcccEEEEEe-cCCeeEEEeecccCCCcchhhcccCCCCC
Q 042486 362 GSVYRGKIGGDFVAIKKVYGD-----ASDQIKLLNKINHSSLIRLLGICF-NGGNWYLVYENAVNGSLSVWINDKGGKFL 435 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~~-----~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~lV~E~~~~gsL~~~l~~~~~~~l 435 (635)
|.||++...+..||+|..+.+ +.+|+.++++++|+|++++++++. .++..+++|||+++++|.+++.......+
T Consensus 20 ~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 99 (256)
T cd05082 20 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 99 (256)
T ss_pred CeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCC
Confidence 799999999999999988654 557999999999999999999865 45568999999999999999976555558
Q ss_pred CHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccc
Q 042486 436 DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEY 515 (635)
Q Consensus 436 ~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~ 515 (635)
++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++....... ....++..|+|||+
T Consensus 100 ~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~y~aPE~ 170 (256)
T cd05082 100 GGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ------DTGKLPVKWTAPEA 170 (256)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC------CCCccceeecCHHH
Confidence 99999999999999999999854 9999999999999999999999999987543221 12234567999999
Q ss_pred cccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHH
Q 042486 516 LENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRL 594 (635)
Q Consensus 516 ~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~l 594 (635)
+.+..++.++||||||+++|||++ |+.|+....... ....+. .......+...+..+.++
T Consensus 171 ~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~~l 231 (256)
T cd05082 171 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVE-----------------KGYKMDAPDGCPPVVYDV 231 (256)
T ss_pred HccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHh-----------------cCCCCCCCCCCCHHHHHH
Confidence 998889999999999999999998 887764322111 111110 001111223345568999
Q ss_pred HHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 595 IESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 595 i~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
+.+||+.||++|||+.++++.|+++
T Consensus 232 i~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 232 MKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHhcCChhhCcCHHHHHHHHhcC
Confidence 9999999999999999999998753
No 81
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.2e-35 Score=302.89 Aligned_cols=252 Identities=21% Similarity=0.293 Sum_probs=194.8
Q ss_pred hhcCCCCCCccc----ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEE
Q 042486 350 ATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYL 413 (635)
Q Consensus 350 at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 413 (635)
..++|..-..|| |.||.++- +|+.+|+|++++. +..|-++|...++++||+|+..|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 345666555565 99999976 8999999999753 4568889999999999999999999999999
Q ss_pred EeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccc
Q 042486 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAER 493 (635)
Q Consensus 414 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 493 (635)
||||++||++..+|...+. |++.....++.+++.|++-||++| +|||||||+|+|||..|++||+|||++.-...
T Consensus 219 iMEylPGGD~mTLL~~~~~--L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDT--LTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHHhcCc--CchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhhh
Confidence 9999999999999976544 999999999999999999999966 99999999999999999999999999853211
Q ss_pred --------------------cCCcee------------------------eecccccCCCccCccccccCCCCcccchhh
Q 042486 494 --------------------QEGEFA------------------------LTSHIVGTKGYMAPEYLENGLVSTKLDVYA 529 (635)
Q Consensus 494 --------------------~~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S 529 (635)
...... .....+|||.|||||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 000000 012357999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCcchh--hHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCC
Q 042486 530 FGVLMLEMLSGKEAPALYSEEN--MLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRP 607 (635)
Q Consensus 530 lGvvl~elltG~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 607 (635)
||||+||||.|.+||....... ..+..|-..+- .......+.+..+||.+|+. ||++|.
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~------------------fP~~~~~s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK------------------FPEEVDLSDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc------------------CCCcCcccHHHHHHHHHHhc-CHHHhc
Confidence 9999999999999987544332 11222211111 11111223557899999999 999997
Q ss_pred C---HHHHHHHHHHHHhhcccccc
Q 042486 608 A---MDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 608 s---~~evl~~L~~~~~~s~~w~~ 628 (635)
- ++||.+| -.-..++|+.
T Consensus 435 G~~G~~EIK~H---PfF~~v~W~~ 455 (550)
T KOG0605|consen 435 GSKGAEEIKKH---PFFKGVDWDH 455 (550)
T ss_pred CcccHHHHhcC---CccccCCcch
Confidence 5 5555444 3455677865
No 82
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-35 Score=318.58 Aligned_cols=239 Identities=21% Similarity=0.312 Sum_probs=192.7
Q ss_pred ceEEEeee-CC-cEEEEEEecc-------ChHHHHHHHhhhc-cCCcccEEEE-Eec------CCeeEEEeecccCCCcc
Q 042486 362 GSVYRGKI-GG-DFVAIKKVYG-------DASDQIKLLNKIN-HSSLIRLLGI-CFN------GGNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~-~~-~~vavK~~~~-------~~~~E~~~l~~l~-h~nIv~l~~~-~~~------~~~~~lV~E~~~~gsL~ 424 (635)
+.||.+++ .+ ..+|+|++.- .+.+|+++|++|. |+|||.+++. ... .-+.+|.||||.||+|-
T Consensus 51 a~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lv 130 (738)
T KOG1989|consen 51 AQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLV 130 (738)
T ss_pred EEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHH
Confidence 79999998 34 8999999853 2568999999996 9999999993 321 13579999999999999
Q ss_pred hhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc---eee-
Q 042486 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE---FAL- 500 (635)
Q Consensus 425 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~---~~~- 500 (635)
+++..+....|++.++++|+.|+++|+.+||... ++|||||||-+||||+.++..||||||.+...-..... ...
T Consensus 131 d~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~v 209 (738)
T KOG1989|consen 131 DFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYV 209 (738)
T ss_pred HHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHH
Confidence 9997554445999999999999999999999986 99999999999999999999999999999743322210 000
Q ss_pred --ecccccCCCccCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhc
Q 042486 501 --TSHIVGTKGYMAPEYLE---NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLM 575 (635)
Q Consensus 501 --~~~~~gt~~y~aPE~~~---~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 575 (635)
.-...-|+.|+|||.+. +..+++|+|||||||+||-|+....||+.... .+++
T Consensus 210 e~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----------------------laIl 267 (738)
T KOG1989|consen 210 EEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----------------------LAIL 267 (738)
T ss_pred HHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----------------------eeEE
Confidence 01135789999999874 66789999999999999999999999853211 1233
Q ss_pred CCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 576 DPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 576 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
+....-...+.++..|.+||+.||+.||.+||++-+|+.++.++....
T Consensus 268 ng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 268 NGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred eccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 443333333567888999999999999999999999999999988654
No 83
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.1e-34 Score=293.79 Aligned_cols=232 Identities=27% Similarity=0.473 Sum_probs=187.9
Q ss_pred ceEEEeee-CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK 433 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~ 433 (635)
|.||+|.. ++..+|+|.+.. ++.+|++++++++|+||+++++++.+.+..++||||+++++|.+++......
T Consensus 20 ~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~ 99 (261)
T cd05148 20 GEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQ 99 (261)
T ss_pred ccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCC
Confidence 89999998 678899998764 3457899999999999999999999999999999999999999999765556
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCc
Q 042486 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAP 513 (635)
Q Consensus 434 ~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP 513 (635)
.+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||.+....... .......++..|+||
T Consensus 100 ~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~---~~~~~~~~~~~~~~P 173 (261)
T cd05148 100 VLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV---YLSSDKKIPYKWTAP 173 (261)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc---ccccCCCCceEecCH
Confidence 689999999999999999999984 49999999999999999999999999997653321 111233456789999
Q ss_pred cccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 514 EYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 514 E~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
|.+.+..++.++||||||+++|+|++ |+.|+....... .+..+. .......+...+..+.
T Consensus 174 E~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~------------------~~~~~~-~~~~~~~~~~~~~~~~ 234 (261)
T cd05148 174 EAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE------------------VYDQIT-AGYRMPCPAKCPQEIY 234 (261)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH------------------HHHHHH-hCCcCCCCCCCCHHHH
Confidence 99988889999999999999999998 787775322111 111111 1111122334456689
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
+++.+||+.||.+|||++++++.|+.
T Consensus 235 ~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 235 KIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred HHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 99999999999999999999999975
No 84
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.2e-34 Score=303.13 Aligned_cols=239 Identities=24% Similarity=0.404 Sum_probs=184.8
Q ss_pred ceEEEeee-------CCcEEEEEEeccC--------hHHHHHHHhhh-ccCCcccEEEEEecC-CeeEEEeecccCCCcc
Q 042486 362 GSVYRGKI-------GGDFVAIKKVYGD--------ASDQIKLLNKI-NHSSLIRLLGICFNG-GNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~-------~~~~vavK~~~~~--------~~~E~~~l~~l-~h~nIv~l~~~~~~~-~~~~lV~E~~~~gsL~ 424 (635)
|.||+|.. +++.||+|+++.. +.+|++++.++ +|+||++++++|... ...+++|||+++++|.
T Consensus 21 g~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~ 100 (337)
T cd05054 21 GKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLS 100 (337)
T ss_pred ceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHH
Confidence 89999964 2468999998642 34689999999 899999999988754 5678999999999999
Q ss_pred hhhcccC-----------------------------------------------------------CCCCCHHHHHHHHH
Q 042486 425 VWINDKG-----------------------------------------------------------GKFLDWAQRIQIAL 445 (635)
Q Consensus 425 ~~l~~~~-----------------------------------------------------------~~~l~~~~~~~i~~ 445 (635)
+++.... ...++|..+..++.
T Consensus 101 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 180 (337)
T cd05054 101 NYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSF 180 (337)
T ss_pred HHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHH
Confidence 9884321 12589999999999
Q ss_pred HHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccccCCCCccc
Q 042486 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKL 525 (635)
Q Consensus 446 ~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ks 525 (635)
|++.||.|||+. +|+||||||+||++++++.+||+|||+++........ .......++..|+|||++.+..++.++
T Consensus 181 qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~ 256 (337)
T cd05054 181 QVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPESIFDKVYTTQS 256 (337)
T ss_pred HHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch-hhccCCCCCccccCcHHhcCCCCCccc
Confidence 999999999984 5999999999999999999999999999865432211 112234566789999999999999999
Q ss_pred chhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCC
Q 042486 526 DVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPS 604 (635)
Q Consensus 526 DV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~ 604 (635)
|||||||++|||++ |..||......+ .+...+ ........+......+.+++.+||+.+|+
T Consensus 257 Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~ 318 (337)
T cd05054 257 DVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRL-----------------KEGTRMRAPEYATPEIYSIMLDCWHNNPE 318 (337)
T ss_pred cHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHH-----------------hccCCCCCCccCCHHHHHHHHHHccCChh
Confidence 99999999999998 888875322111 111110 00011111223345689999999999999
Q ss_pred CCCCHHHHHHHHHHHHhh
Q 042486 605 GRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 605 ~RPs~~evl~~L~~~~~~ 622 (635)
+||++.|++++|++++..
T Consensus 319 ~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 319 DRPTFSELVEILGDLLQE 336 (337)
T ss_pred hCcCHHHHHHHHHHHHhc
Confidence 999999999999998864
No 85
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.5e-34 Score=309.16 Aligned_cols=257 Identities=19% Similarity=0.276 Sum_probs=186.6
Q ss_pred CCCCCCccc----ceEEEeee--CCcEEEEEEec-cChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 353 DFNPSCWIK----GSVYRGKI--GGDFVAIKKVY-GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 353 ~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~-~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
+|.....|| |.||+++. .++.||||... ..+.+|+++|++++|+||+++++++..++..++|||++. ++|.+
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~ 248 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYT 248 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHH
Confidence 344444454 79999998 57889999753 356789999999999999999999999999999999994 68888
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++.... ..+++.+++.|+.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++........ .......
T Consensus 249 ~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~~ 323 (461)
T PHA03211 249 YLGARL-RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST-PFHYGIA 323 (461)
T ss_pred HHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceeccccccc-ccccccC
Confidence 885433 24999999999999999999999854 999999999999999999999999999765332111 1122356
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcch------hhHHHHhhhccc------ccCCchhhhhh
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE------NMLLVDVLNPVL------HKEDGEESLRH 573 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~------~~~l~~~~~~~~------~~~~~~~~l~~ 573 (635)
||..|+|||++.+..++.++|||||||++|||++|..++...... ...+...+.... ...........
T Consensus 324 GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~ 403 (461)
T PHA03211 324 GTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQ 403 (461)
T ss_pred CCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHH
Confidence 999999999999989999999999999999999988765432111 111111111100 00000000000
Q ss_pred hcC---CcCCC--CCC-----hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 574 LMD---PSMQG--NYP-----PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 574 ~~d---~~~~~--~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+.. ..... ..+ ......+.+|+.+||+.||++|||+.|++++
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 404 YRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 00000 000 0123457899999999999999999999986
No 86
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2e-34 Score=294.76 Aligned_cols=243 Identities=25% Similarity=0.407 Sum_probs=185.4
Q ss_pred cCCCCCCccc----ceEEEeeeC-------CcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeE
Q 042486 352 DDFNPSCWIK----GSVYRGKIG-------GDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWY 412 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~~-------~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 412 (635)
++|.....+| |.||+|... +..||||++.. ++.+|+.++++++|+||+++++++..++..+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~ 85 (277)
T cd05062 6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 85 (277)
T ss_pred HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeE
Confidence 3444444554 799998753 35799998753 2457899999999999999999999889999
Q ss_pred EEeecccCCCcchhhcccC--------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEee
Q 042486 413 LVYENAVNGSLSVWINDKG--------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIAN 484 (635)
Q Consensus 413 lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 484 (635)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 86 VIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEECC
Confidence 9999999999999985422 12367889999999999999999984 499999999999999999999999
Q ss_pred ecCcccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccc
Q 042486 485 FALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLH 563 (635)
Q Consensus 485 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~ 563 (635)
||+++........ .......++..|+|||++.++.++.++||||||+++|||++ |..||....... ....
T Consensus 163 fg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~--~~~~------ 233 (277)
T cd05062 163 FGMTRDIYETDYY-RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ--VLRF------ 233 (277)
T ss_pred CCCccccCCccee-ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHH------
Confidence 9998754332211 11122345678999999998889999999999999999999 566764322211 1111
Q ss_pred cCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 564 ~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
...... ...+...+..+.+++.+||+.||++||++.|+++.|+
T Consensus 234 ----------~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 234 ----------VMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred ----------HHcCCc-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 111110 0112233456899999999999999999999999886
No 87
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=9.7e-35 Score=305.82 Aligned_cols=245 Identities=25% Similarity=0.363 Sum_probs=180.5
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecC-----CeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNG-----GNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~lV~E~~~~gsL~~ 425 (635)
|.||+|+. ++..||||++.. .+.+|++++++++||||+++++++... ...|+||||+. ++|.+
T Consensus 14 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~ 92 (338)
T cd07859 14 GVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQ 92 (338)
T ss_pred eEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHH
Confidence 89999987 688999998853 245799999999999999999988643 24799999995 68988
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++................
T Consensus 93 ~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~ 167 (338)
T cd07859 93 VIKAND--DLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 167 (338)
T ss_pred HHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCC
Confidence 886543 3899999999999999999999855 99999999999999999999999999975433222112223457
Q ss_pred cCCCccCcccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC-----------chhhhh
Q 042486 506 GTKGYMAPEYLEN--GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED-----------GEESLR 572 (635)
Q Consensus 506 gt~~y~aPE~~~~--~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~-----------~~~~l~ 572 (635)
||..|+|||++.+ ..++.++|||||||++|||++|+.||...+... ....+........ ..+.+.
T Consensus 168 ~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 245 (338)
T cd07859 168 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH--QLDLITDLLGTPSPETISRVRNEKARRYLS 245 (338)
T ss_pred CCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH--HHHHHHHHhCCCCHHHHHHhhhhhHHHHHH
Confidence 8999999999865 678999999999999999999999886433211 1111111111000 001111
Q ss_pred hhcCCcCCCCC---ChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 573 HLMDPSMQGNY---PPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 573 ~~~d~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+.. ...... -+..+..+.+++.+||+.||++||+++|++++
T Consensus 246 ~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 246 SMRK-KQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhcc-cCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 1110 000000 01123457899999999999999999999986
No 88
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.9e-34 Score=297.32 Aligned_cols=236 Identities=28% Similarity=0.464 Sum_probs=185.7
Q ss_pred ceEEEeeeC-------CcEEEEEEeccC--------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKIG-------GDFVAIKKVYGD--------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~~-------~~~vavK~~~~~--------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
|.||++... ...+|+|.+..+ +.+|+++++++ +|+||+++++++..++..+++|||+++|+|.+
T Consensus 26 g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~ 105 (293)
T cd05053 26 GQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRD 105 (293)
T ss_pred ccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHH
Confidence 899999862 257999988643 44689999999 89999999999999999999999999999999
Q ss_pred hhccc--------------CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccc
Q 042486 426 WINDK--------------GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA 491 (635)
Q Consensus 426 ~l~~~--------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 491 (635)
++... ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 182 (293)
T cd05053 106 FLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTEDHVMKIADFGLARDI 182 (293)
T ss_pred HHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcCCCeEEeCcccccccc
Confidence 98532 234589999999999999999999984 4999999999999999999999999999865
Q ss_pred cccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhh
Q 042486 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEES 570 (635)
Q Consensus 492 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 570 (635)
...... .......++..|+|||.+.+..++.++|||||||++|||++ |..|+....... ....
T Consensus 183 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~------------- 246 (293)
T cd05053 183 HHIDYY-RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--LFKL------------- 246 (293)
T ss_pred ccccce-eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH--HHHH-------------
Confidence 432211 11122234578999999988889999999999999999998 877764322111 1111
Q ss_pred hhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 571 LRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 571 l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
+........+...+..+.+|+.+||+.||++|||+.|+++.|++++
T Consensus 247 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 247 ----LKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ----HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1111111223334556899999999999999999999999999876
No 89
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.3e-34 Score=303.10 Aligned_cols=226 Identities=23% Similarity=0.396 Sum_probs=182.5
Q ss_pred ceEEEeee-----CCcEEEEEEeccC-----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI-----GGDFVAIKKVYGD-----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~-----~~~~vavK~~~~~-----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
|.||+++. +++.||||.++.. +.+|+++|++++||||+++++.+..++..|+||||+++|+|.+
T Consensus 10 g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 89 (323)
T cd05584 10 GKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM 89 (323)
T ss_pred eEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHH
Confidence 89999875 5789999988531 3468999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++.... .+.+..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .......
T Consensus 90 ~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~ 161 (323)
T cd05584 90 HLEREG--IFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG---TVTHTFC 161 (323)
T ss_pred HHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC---CcccccC
Confidence 996543 3788889999999999999999855 9999999999999999999999999987432221 1123357
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
||+.|+|||++.+..++.++||||||+++|||++|+.||....... ....+.... ...+.
T Consensus 162 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~------------------~~~~~~~~~--~~~~~ 221 (323)
T cd05584 162 GTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK------------------TIDKILKGK--LNLPP 221 (323)
T ss_pred CCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH------------------HHHHHHcCC--CCCCC
Confidence 8999999999998888999999999999999999999986432211 111111111 12233
Q ss_pred HHHHHHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
..+..+.+++.+||+.||++|| ++++++++
T Consensus 222 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 222 YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 3455689999999999999999 78888775
No 90
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.9e-34 Score=289.51 Aligned_cols=229 Identities=27% Similarity=0.390 Sum_probs=186.2
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+++. ++..|++|.+.. ++.+|++++++++|+||+++++++.+++..++||||+++++|.+++...
T Consensus 14 ~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 93 (256)
T cd08529 14 GVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQ 93 (256)
T ss_pred eEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHh
Confidence 79999987 688999998742 2457899999999999999999999999999999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
....+++..+..++.+++.||.|||+. +++|+||||+||++++++.++|+|||++........ ......++..|
T Consensus 94 ~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y 167 (256)
T cd08529 94 RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN---FANTIVGTPYY 167 (256)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc---hhhccccCccc
Confidence 445689999999999999999999984 599999999999999999999999999876543321 12234678899
Q ss_pred cCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHH
Q 042486 511 MAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590 (635)
Q Consensus 511 ~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~ 590 (635)
+|||++.+..++.++|+||||++++||++|+.|+....... ... ...... ....+...+..
T Consensus 168 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~----------------~~~~~~-~~~~~~~~~~~ 228 (256)
T cd08529 168 LSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--LIL----------------KIIRGV-FPPVSQMYSQQ 228 (256)
T ss_pred cCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HHH----------------HHHcCC-CCCCccccCHH
Confidence 99999998889999999999999999999999986433211 100 011000 11122234456
Q ss_pred HHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 591 VIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 591 l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+.+++.+||+.+|++||++.+++++
T Consensus 229 ~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 229 LAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHHHHHccCCcccCcCHHHHhhC
Confidence 8999999999999999999999875
No 91
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.8e-34 Score=293.69 Aligned_cols=251 Identities=24% Similarity=0.416 Sum_probs=185.2
Q ss_pred ceEEEeee------CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEec--CCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI------GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFN--GGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~------~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||++.. ++..||+|++.. .+.+|++++++++|+||+++++++.. ....++||||+++++|.++
T Consensus 18 g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 97 (284)
T cd05081 18 GSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDY 97 (284)
T ss_pred ceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHH
Confidence 89999874 477899999864 35679999999999999999998764 3467999999999999999
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g 506 (635)
+.... ..+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++................+
T Consensus 98 l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 173 (284)
T cd05081 98 LQKHR-ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGES 173 (284)
T ss_pred HHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCC
Confidence 96543 2389999999999999999999985 4999999999999999999999999999865433221111222234
Q ss_pred CCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 507 t~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
+..|+|||++.+..++.++||||||+++|||++|..++...... .................+.+.+........+..
T Consensus 174 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (284)
T cd05081 174 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPG 250 (284)
T ss_pred ceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccccccchHHHHHHHhcCCcCCCCCC
Confidence 45699999999888999999999999999999988765322111 001100000000001111112221111122233
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
.+..+.+++.+||+.+|++|||++||++.|+.+
T Consensus 251 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 251 CPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 455699999999999999999999999999865
No 92
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.3e-34 Score=295.03 Aligned_cols=232 Identities=25% Similarity=0.314 Sum_probs=184.2
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|+||++.. +++.+|+|.+..+ +..|++++++++|+||+++.+++..++..++||||+++|+|.+++..
T Consensus 7 g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~ 86 (280)
T cd05608 7 GEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYN 86 (280)
T ss_pred eeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHh
Confidence 89999987 6889999998532 34689999999999999999999999999999999999999988743
Q ss_pred --cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 430 --KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 430 --~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++........ ......||
T Consensus 87 ~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~ 160 (280)
T cd05608 87 VDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS---KTKGYAGT 160 (280)
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc---cccccCCC
Confidence 22345899999999999999999999854 99999999999999999999999999875543221 12335689
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
+.|+|||.+.+..++.++||||||+++|||++|+.||......... .+......... ...+...
T Consensus 161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--------------~~~~~~~~~~~--~~~~~~~ 224 (280)
T cd05608 161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--------------KELKQRILNDS--VTYPDKF 224 (280)
T ss_pred cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH--------------HHHHHhhcccC--CCCcccC
Confidence 9999999999999999999999999999999999998643221100 01111111111 1223344
Q ss_pred HHHHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
+..+.+++.+||+.||++|| ++++++++
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 225 SPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 56689999999999999999 77888876
No 93
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.9e-34 Score=307.68 Aligned_cols=255 Identities=19% Similarity=0.233 Sum_probs=187.6
Q ss_pred CCCCCCccc----ceEEEeee--CCcEEEEEEecc-ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 353 DFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG-DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 353 ~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~-~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
+|.....|| |.||++.. +++.||+|.... .+.+|+++|++++||||+++++++..++..++|+|++. ++|.+
T Consensus 93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~ 171 (391)
T PHA03212 93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYC 171 (391)
T ss_pred CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHH
Confidence 444444444 89999987 688999998754 46789999999999999999999999999999999985 68888
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++.... .+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....... .......
T Consensus 172 ~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~--~~~~~~~ 244 (391)
T PHA03212 172 YLAAKR--NIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA--NKYYGWA 244 (391)
T ss_pred HHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccccc--ccccccc
Confidence 885543 3899999999999999999999854 99999999999999999999999999975332211 1122357
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcc------hhhHHHHhhhcc---ccc--CCchhhhhhh
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSE------ENMLLVDVLNPV---LHK--EDGEESLRHL 574 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~------~~~~l~~~~~~~---~~~--~~~~~~l~~~ 574 (635)
||+.|+|||++.+..++.++|||||||++|||++|+.|+..... ....+...+... ... .+....+...
T Consensus 245 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~ 324 (391)
T PHA03212 245 GTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEI 324 (391)
T ss_pred CccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHH
Confidence 99999999999988899999999999999999999987653221 011111111100 000 0000111110
Q ss_pred c----CC--cCCCCCC-----hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 575 M----DP--SMQGNYP-----PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 575 ~----d~--~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
. .. ......+ ...+..+.+|+.+||+.||++|||++|++++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 325 YIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0 00 0000111 1235568999999999999999999999975
No 94
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.6e-34 Score=308.41 Aligned_cols=238 Identities=24% Similarity=0.391 Sum_probs=185.3
Q ss_pred ceEEEeeeC-------CcEEEEEEecc--------ChHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKIG-------GDFVAIKKVYG--------DASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~~-------~~~vavK~~~~--------~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
|.||+|+.. +..||||+++. .+.+|+++|++++ ||||++++++|.+.+..||||||+++|+|.+
T Consensus 51 G~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~ 130 (400)
T cd05105 51 GKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVN 130 (400)
T ss_pred ceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHH
Confidence 899999862 23699999864 2457999999996 9999999999999999999999999999999
Q ss_pred hhcccC--------------------------------------------------------------------------
Q 042486 426 WINDKG-------------------------------------------------------------------------- 431 (635)
Q Consensus 426 ~l~~~~-------------------------------------------------------------------------- 431 (635)
++....
T Consensus 131 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (400)
T cd05105 131 YLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDR 210 (400)
T ss_pred HHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccc
Confidence 874321
Q ss_pred --------------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccc
Q 042486 432 --------------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA 491 (635)
Q Consensus 432 --------------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 491 (635)
...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 211 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~~~~~kL~DfGla~~~ 287 (400)
T cd05105 211 PASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQGKIVKICDFGLARDI 287 (400)
T ss_pred cccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeCCCEEEEEeCCcceec
Confidence 12478888999999999999999985 4999999999999999999999999998755
Q ss_pred cccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhh
Q 042486 492 ERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEES 570 (635)
Q Consensus 492 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 570 (635)
...... .......++..|+|||.+.+..++.++||||||+++|||++ |..||.....+... .....
T Consensus 288 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~-~~~~~----------- 354 (400)
T cd05105 288 MHDSNY-VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF-YNKIK----------- 354 (400)
T ss_pred cccccc-cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH-HHHHh-----------
Confidence 332211 11223456778999999998889999999999999999997 88887532211111 00000
Q ss_pred hhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042486 571 LRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621 (635)
Q Consensus 571 l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 621 (635)
.......+...+..+.+++.+||+.||++||++.+|.+.|++++.
T Consensus 355 ------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 355 ------SGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ------cCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 000111223345568999999999999999999999999998764
No 95
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=8.4e-35 Score=304.91 Aligned_cols=227 Identities=25% Similarity=0.349 Sum_probs=182.6
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||+|.++.+ +.+|++++++++|+||+++.+++..++..|+||||+++|+|.+++..
T Consensus 9 g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~ 88 (325)
T cd05594 9 GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR 88 (325)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHh
Confidence 89999986 7889999988642 24678899999999999999999999999999999999999998865
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++..+..++.||+.||.|||+. .+|+||||||+|||++.++.+||+|||+++....... ......||+.
T Consensus 89 ~~--~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~gt~~ 161 (325)
T cd05594 89 ER--VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA---TMKTFCGTPE 161 (325)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc---ccccccCCcc
Confidence 43 389999999999999999999961 3599999999999999999999999999874322211 1223569999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.+..++.++|||||||++|||++|+.||.....+.. ... +.... ...+...+.
T Consensus 162 y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~--~~~----------------i~~~~--~~~p~~~~~ 221 (325)
T cd05594 162 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--FEL----------------ILMEE--IRFPRTLSP 221 (325)
T ss_pred cCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH--HHH----------------HhcCC--CCCCCCCCH
Confidence 9999999988999999999999999999999999854322211 010 00000 112223345
Q ss_pred HHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
.+.+++.+||+.||++|+ ++.+++++
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 689999999999999996 89999876
No 96
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.1e-34 Score=289.87 Aligned_cols=230 Identities=28% Similarity=0.455 Sum_probs=182.4
Q ss_pred ceEEEeee-CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||++++ ++..+|+|.+.. ++.+|++++++++|+||+++++++...+..++||||+++++|.+++..... .
T Consensus 18 ~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~ 96 (256)
T cd05059 18 GVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKG-K 96 (256)
T ss_pred ceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhccc-C
Confidence 89999988 456899998764 356799999999999999999999999999999999999999999965433 4
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++....... .......++..|+|||
T Consensus 97 ~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~y~~Pe 171 (256)
T cd05059 97 LGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY--TSSQGTKFPVKWAPPE 171 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccc--cccCCCCCCccccCHH
Confidence 899999999999999999999854 99999999999999999999999999875532211 1111122345799999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
.+.+..++.++||||||+++|||++ |+.||....... ....+. .......+...+..+.+
T Consensus 172 ~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~~ 232 (256)
T cd05059 172 VFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--VVESVS-----------------AGYRLYRPKLAPTEVYT 232 (256)
T ss_pred HhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--HHHHHH-----------------cCCcCCCCCCCCHHHHH
Confidence 9998889999999999999999999 777775432211 111110 00111122234556999
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L 616 (635)
++.+||..+|++||++.|+++.|
T Consensus 233 li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 233 IMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHhcCChhhCcCHHHHHHHh
Confidence 99999999999999999999876
No 97
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=301.31 Aligned_cols=234 Identities=27% Similarity=0.419 Sum_probs=193.2
Q ss_pred ceEEEeeeCC------cEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKIGG------DFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~~~------~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|.+.. -.||||..+.+ |..|..+|++++||||++|+|+|. +...++|||.++-|.|..||
T Consensus 403 GdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e~P~WivmEL~~~GELr~yL 481 (974)
T KOG4257|consen 403 GDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-EQPMWIVMELAPLGELREYL 481 (974)
T ss_pred cceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-ccceeEEEecccchhHHHHH
Confidence 8999999832 26999988763 678999999999999999999995 45678999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
+.++.. |+......++.||+.||.|||+ .++|||||..+|||+.....+||+|||+++..+.... ...+...-.
T Consensus 482 q~nk~s-L~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y--YkaS~~kLP 555 (974)
T KOG4257|consen 482 QQNKDS-LPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY--YKASRGKLP 555 (974)
T ss_pred Hhcccc-chHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccccch--hhccccccc
Confidence 766543 8989999999999999999999 4599999999999999999999999999998876542 122223345
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
..|||||.+....++.++|||-|||++||++. |..||..-...+ .+.. +...-+...|+.
T Consensus 556 IKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD-----VI~~--------------iEnGeRlP~P~n 616 (974)
T KOG4257|consen 556 IKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD-----VIGH--------------IENGERLPCPPN 616 (974)
T ss_pred eeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc-----eEEE--------------ecCCCCCCCCCC
Confidence 68999999999999999999999999999876 888886433221 1111 111223456777
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 621 (635)
++..|..|+.+||++||.+||++.|+...|+.++.
T Consensus 617 CPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 617 CPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999886
No 98
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.2e-34 Score=289.89 Aligned_cols=231 Identities=28% Similarity=0.431 Sum_probs=182.9
Q ss_pred ceEEEeeeC-CcEEEEEEeccC------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKIG-GDFVAIKKVYGD------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~~-~~~vavK~~~~~------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||+|++. +..+|+|.++.. +.+|+.++++++||||+++++++...+..+++|||+.+|+|.+++..... .
T Consensus 18 ~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~-~ 96 (256)
T cd05113 18 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGK-R 96 (256)
T ss_pred ceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCC-C
Confidence 899999884 446999988653 56799999999999999999999988889999999999999999965433 4
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||.++...... ........++..|+|||
T Consensus 97 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~--~~~~~~~~~~~~y~~pe 171 (256)
T cd05113 97 FQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPE 171 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCc--eeecCCCccChhhCCHH
Confidence 899999999999999999999854 9999999999999999999999999987553321 11112234567899999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
.+.+..++.++||||||+++|||++ |+.|+....... ..... ... .....+...+..+.+
T Consensus 172 ~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~----------------~~~-~~~~~~~~~~~~~~~ 232 (256)
T cd05113 172 VLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--TVEKV----------------SQG-LRLYRPHLASEKVYA 232 (256)
T ss_pred HHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHH----------------hcC-CCCCCCCCCCHHHHH
Confidence 9988889999999999999999999 888875433211 11110 000 000112223456899
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
++.+||+.||.+||++.++++.|+
T Consensus 233 li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 233 IMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHcCCCcccCCCHHHHHHhhC
Confidence 999999999999999999998763
No 99
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-35 Score=304.49 Aligned_cols=227 Identities=25% Similarity=0.408 Sum_probs=192.5
Q ss_pred EEEeeeCCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCe-eEEEeecccCCCcchhhcccCCC
Q 042486 364 VYRGKIGGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGN-WYLVYENAVNGSLSVWINDKGGK 433 (635)
Q Consensus 364 Vy~g~~~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-~~lV~E~~~~gsL~~~l~~~~~~ 433 (635)
.++++.++..+++|++.- ...+|+.++++++|||||.+.+.|..++. .+|||+|++||+|.+.+.+..+.
T Consensus 22 lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~ 101 (426)
T KOG0589|consen 22 LVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGV 101 (426)
T ss_pred hhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhc
Confidence 445566888999998853 35689999999999999999999998888 89999999999999999777677
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCc
Q 042486 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAP 513 (635)
Q Consensus 434 ~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP 513 (635)
.++++.+..++.|++.|+.|||+ +.|+|||||+.|||++.++.+||+|||+|+...... .......||+.||.|
T Consensus 102 ~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---~~a~tvvGTp~YmcP 175 (426)
T KOG0589|consen 102 LFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED---SLASTVVGTPYYMCP 175 (426)
T ss_pred cccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCch---hhhheecCCCcccCH
Confidence 79999999999999999999997 459999999999999999999999999999876554 234557899999999
Q ss_pred cccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 514 E~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
|.+.+..|..|+|||||||++|||++-+++|...+-.. .+.++.... ....|..++..+..
T Consensus 176 Eil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~------------------Li~ki~~~~-~~Plp~~ys~el~~ 236 (426)
T KOG0589|consen 176 EILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE------------------LILKINRGL-YSPLPSMYSSELRS 236 (426)
T ss_pred HHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH------------------HHHHHhhcc-CCCCCccccHHHHH
Confidence 99999999999999999999999999998876433221 111111111 23445667778999
Q ss_pred HHHHhhhcCCCCCCCHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~ 615 (635)
+++.|+..+|..||++.+++.+
T Consensus 237 lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 237 LVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHhhcCCccCCCHHHHhhC
Confidence 9999999999999999999986
No 100
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=306.73 Aligned_cols=245 Identities=26% Similarity=0.393 Sum_probs=198.2
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEeccCh----------HHHHHHHhhh-ccCCcccEEEEEecCCeeEEE
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGDA----------SDQIKLLNKI-NHSSLIRLLGICFNGGNWYLV 414 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~~----------~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV 414 (635)
++|.--..+| |+|+.+.. +++.+|||.++++. ..|..++... +||.+++|+..|...++.|+|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 4454444444 89999988 67899999998752 3466666666 599999999999999999999
Q ss_pred eecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 415 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
|||+.||++..+.+... +++....-++..|+.||+|||+.+ ||+||||.+|||||.+|.+||+|||+++..-..
T Consensus 448 mey~~Ggdm~~~~~~~~---F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 448 MEYVAGGDLMHHIHTDV---FSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEecCCCcEEEEEeccc---ccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccccCCC
Confidence 99999999766665432 899999999999999999999955 999999999999999999999999999854322
Q ss_pred CCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhh
Q 042486 495 EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL 574 (635)
Q Consensus 495 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 574 (635)
...+..++||+.|||||++.+..|+...|.|||||+||||+.|..||...+++ +....+
T Consensus 522 ---g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe------------------e~FdsI 580 (694)
T KOG0694|consen 522 ---GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE------------------EVFDSI 580 (694)
T ss_pred ---CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH------------------HHHHHH
Confidence 23567799999999999999999999999999999999999999998654433 233333
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCH-----HHHHHHHHHHHhhcccccc
Q 042486 575 MDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAM-----DKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 575 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~L~~~~~~s~~w~~ 628 (635)
+.. ...||...+.+..++++++|..+|++|.-+ ++|.. .-+-.+++|+.
T Consensus 581 ~~d--~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~---hpFFr~i~w~~ 634 (694)
T KOG0694|consen 581 VND--EVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKK---HPFFRSIDWDD 634 (694)
T ss_pred hcC--CCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhh---CCccccCCHHH
Confidence 322 235778888889999999999999999866 33433 34555677765
No 101
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.9e-34 Score=292.80 Aligned_cols=233 Identities=26% Similarity=0.489 Sum_probs=184.4
Q ss_pred ceEEEeee-------CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI-------GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~-------~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|+. ++..||||.++. ++.+|+++|++++|+||+++++++...+..++||||+++++|.++
T Consensus 19 ~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 98 (280)
T cd05049 19 GKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKF 98 (280)
T ss_pred ceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHH
Confidence 89999976 246899998854 355799999999999999999999999999999999999999999
Q ss_pred hcccC------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 427 INDKG------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 427 l~~~~------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
+...+ ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 99 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~ 175 (280)
T cd05049 99 LRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTT 175 (280)
T ss_pred HHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeEEECCcccceecccC
Confidence 95432 234789999999999999999999854 999999999999999999999999998754322
Q ss_pred CCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhh
Q 042486 495 EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573 (635)
Q Consensus 495 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 573 (635)
.. ........++..|+|||++.+..++.++||||||+++|||++ |+.||....... ..+..
T Consensus 176 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~--~~~~~--------------- 237 (280)
T cd05049 176 DY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE--VIECI--------------- 237 (280)
T ss_pred cc-eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH---------------
Confidence 11 111223345778999999999999999999999999999998 988875332221 11111
Q ss_pred hcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 574 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
..... ...+...+..+.+++.+||+.||++||+++|+++.|+
T Consensus 238 -~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 238 -TQGRL-LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred -HcCCc-CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11111 1112234456899999999999999999999999886
No 102
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.2e-35 Score=308.49 Aligned_cols=232 Identities=23% Similarity=0.319 Sum_probs=184.4
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||||+++.. +.+|++++.+++|+||+++++++.+++..++||||+++++|.+++..
T Consensus 15 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 94 (350)
T cd05573 15 GEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIR 94 (350)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHH
Confidence 89999998 5899999998532 45789999999999999999999999999999999999999999966
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCC-------------
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG------------- 496 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------- 496 (635)
. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 95 ~--~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~ 169 (350)
T cd05573 95 K--DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLF 169 (350)
T ss_pred c--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccc
Confidence 5 34899999999999999999999854 99999999999999999999999999976543220
Q ss_pred -------------ceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccc
Q 042486 497 -------------EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563 (635)
Q Consensus 497 -------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~ 563 (635)
.........||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~-~~~i~~---- 244 (350)
T cd05573 170 RDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET-YNKIIN---- 244 (350)
T ss_pred cccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH-HHHHhc----
Confidence 00112335689999999999999999999999999999999999999864332111 001000
Q ss_pred cCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCC-HHHHHHH
Q 042486 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA-MDKIAQS 615 (635)
Q Consensus 564 ~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 615 (635)
.. ...........+..+.+++.+|+. ||.+||+ ++|++++
T Consensus 245 ----------~~-~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 245 ----------WK-ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ----------cC-CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 00 000000011135568999999997 9999999 9999986
No 103
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.5e-34 Score=292.24 Aligned_cols=233 Identities=27% Similarity=0.431 Sum_probs=181.1
Q ss_pred ceEEEeeeC-------CcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIG-------GDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~-------~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|.+. +..||+|.... ++.+|+.++++++|+||+++++++.+.+..++||||+++++|.++
T Consensus 20 g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 99 (277)
T cd05036 20 GEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSF 99 (277)
T ss_pred CcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHH
Confidence 899999883 36789998753 256788999999999999999999988899999999999999999
Q ss_pred hcccC-----CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC---cEEEeeecCcccccccCCce
Q 042486 427 INDKG-----GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF---RAKIANFALARPAERQEGEF 498 (635)
Q Consensus 427 l~~~~-----~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~---~~kl~Dfg~a~~~~~~~~~~ 498 (635)
+.... ...+++..++.++.||+.||+|||+.+ ++||||||+||+++.++ .+||+|||+++....... .
T Consensus 100 i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~-~ 175 (277)
T cd05036 100 LRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASY-Y 175 (277)
T ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEeccCccccccCCccc-e
Confidence 85432 124899999999999999999999854 99999999999998654 699999999986532211 0
Q ss_pred eeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCC
Q 042486 499 ALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDP 577 (635)
Q Consensus 499 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~ 577 (635)
........+..|+|||++.+..++.++|||||||++|||++ |+.||....... ..+.+. .
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~~~~~~-----------------~ 236 (277)
T cd05036 176 RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--VMEFVT-----------------G 236 (277)
T ss_pred ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH-----------------c
Confidence 11112233567999999998889999999999999999997 888875332211 111111 1
Q ss_pred cCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 578 SMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 578 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
......+...+..+.+++.+||+.+|++||++.+|+++|.
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 237 GGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111223334556899999999999999999999999986
No 104
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=9.2e-34 Score=282.03 Aligned_cols=245 Identities=26% Similarity=0.338 Sum_probs=185.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCC-cccEEEEEecCC------eeEEEeecccCCCc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSS-LIRLLGICFNGG------NWYLVYENAVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~n-Iv~l~~~~~~~~------~~~lV~E~~~~gsL 423 (635)
|+||+|+. +|+.||+|+++-+ ..+|+.+|++++|+| |++|++++...+ .+++||||+.. +|
T Consensus 25 g~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL 103 (323)
T KOG0594|consen 25 GVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DL 103 (323)
T ss_pred eEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecc-cH
Confidence 89999987 8899999998643 358999999999999 999999999876 78999999954 99
Q ss_pred chhhcccCC--CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeee
Q 042486 424 SVWINDKGG--KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT 501 (635)
Q Consensus 424 ~~~l~~~~~--~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 501 (635)
..++..... ..++...+..++.||+.||.|||+++ |+||||||.||||+++|.+||+|||+|+...-... ..
T Consensus 104 ~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~---~y 177 (323)
T KOG0594|consen 104 KKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR---TY 177 (323)
T ss_pred HHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchHHHhcCCcc---cc
Confidence 999965442 34787899999999999999999966 99999999999999999999999999996543322 13
Q ss_pred cccccCCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC--chhhhhhhcCCc
Q 042486 502 SHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED--GEESLRHLMDPS 578 (635)
Q Consensus 502 ~~~~gt~~y~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~l~~~~d~~ 578 (635)
.+.++|..|+|||++.+. .|+...||||+||++.||++++..|....+.++ +.... ..+.... .......+.+-.
T Consensus 178 t~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~q-l~~If-~~lGtP~e~~Wp~v~~~~~~k 255 (323)
T KOG0594|consen 178 TPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQ-LFRIF-RLLGTPNEKDWPGVSSLPDYK 255 (323)
T ss_pred cccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHH-HHHHH-HHcCCCCccCCCCcccccccc
Confidence 445789999999999875 799999999999999999999987776555322 11111 1111110 011111111111
Q ss_pred --CCCCC-ChHH-------HHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 579 --MQGNY-PPVT-------AILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 579 --~~~~~-~~~~-------~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..... +... .....+++.+||+.+|.+|.|++..++|
T Consensus 256 ~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 256 APFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 00000 1111 1357899999999999999999999987
No 105
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.3e-34 Score=301.11 Aligned_cols=226 Identities=25% Similarity=0.374 Sum_probs=181.4
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. +++.||||.++.+ +..|.+++..+ +||||+++++++.+++..|+||||+++|+|..++.
T Consensus 9 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~ 88 (321)
T cd05591 9 GKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQ 88 (321)
T ss_pred eEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHH
Confidence 89999987 5779999998642 33577788766 79999999999999999999999999999999886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... .......||.
T Consensus 89 ~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~ 160 (321)
T cd05591 89 RSR--KFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG---VTTTTFCGTP 160 (321)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC---ccccccccCc
Confidence 543 3899999999999999999999855 9999999999999999999999999987532221 1123356899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||........ +..+.... ...+...+
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~------------------~~~i~~~~--~~~p~~~~ 220 (321)
T cd05591 161 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL------------------FESILHDD--VLYPVWLS 220 (321)
T ss_pred cccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH------------------HHHHHcCC--CCCCCCCC
Confidence 99999999988899999999999999999999999864332211 11111111 11222344
Q ss_pred HHHHHHHHHhhhcCCCCCC-------CHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRP-------AMDKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RP-------s~~evl~~ 615 (635)
..+.+++.+||+.||++|| ++++++++
T Consensus 221 ~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 221 KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 5689999999999999999 78888766
No 106
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.5e-34 Score=288.72 Aligned_cols=234 Identities=26% Similarity=0.451 Sum_probs=184.4
Q ss_pred ceEEEeee-CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||+|+. ++..||+|+++. ++.+|++++++++|+||+++++++. ++..++||||+++|+|.+++.......
T Consensus 20 ~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~ 98 (262)
T cd05071 20 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKY 98 (262)
T ss_pred CcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccC
Confidence 79999988 445799998864 2567999999999999999999874 456799999999999999997654455
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||.++....... .......++..|+|||
T Consensus 99 ~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~--~~~~~~~~~~~y~~PE 173 (262)
T cd05071 99 LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--TARQGAKFPIKWTAPE 173 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccc--ccccCCcccceecCHh
Confidence 89999999999999999999984 499999999999999999999999999976543221 1112234667899999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
+..+..++.++||||||+++|||++ |..||....... .... +.. ......+...+..+.+
T Consensus 174 ~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--~~~~----------------~~~-~~~~~~~~~~~~~l~~ 234 (262)
T cd05071 174 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQ----------------VER-GYRMPCPPECPESLHD 234 (262)
T ss_pred HhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--HHHH----------------Hhc-CCCCCCccccCHHHHH
Confidence 9988889999999999999999999 666664322111 1110 000 0011122334556899
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
++.+|++.||++||++.++++.|+.++
T Consensus 235 li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 235 LMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred HHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 999999999999999999999998875
No 107
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.3e-34 Score=308.86 Aligned_cols=240 Identities=22% Similarity=0.270 Sum_probs=187.6
Q ss_pred hhcCCCCCCccc----ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEE
Q 042486 350 ATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYL 413 (635)
Q Consensus 350 at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 413 (635)
..++|.....|| |.||+++. +++.||+|.+.. .+.+|+.+++.++||||+++++++.+++..|+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 345565555555 89999987 688999998853 14578999999999999999999999999999
Q ss_pred EeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccc
Q 042486 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAER 493 (635)
Q Consensus 414 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 493 (635)
||||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999998653 2788889999999999999999854 99999999999999999999999999876533
Q ss_pred cCCceeeecccccCCCccCcccccc----CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchh
Q 042486 494 QEGEFALTSHIVGTKGYMAPEYLEN----GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEE 569 (635)
Q Consensus 494 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 569 (635)
... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 195 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------------------ 254 (370)
T cd05596 195 NGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------------------ 254 (370)
T ss_pred CCc--ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH------------------
Confidence 211 11234579999999998864 347899999999999999999999986432211
Q ss_pred hhhhhcCCcCCCCCC--hHHHHHHHHHHHHhhhcCCCC--CCCHHHHHHH
Q 042486 570 SLRHLMDPSMQGNYP--PVTAILVIRLIESCLKKDPSG--RPAMDKIAQS 615 (635)
Q Consensus 570 ~l~~~~d~~~~~~~~--~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 615 (635)
....+++......++ ...+..+.+++.+||+.+|++ |++++|++++
T Consensus 255 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 255 TYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 111111111000111 123556889999999999988 9999999887
No 108
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.5e-34 Score=295.55 Aligned_cols=231 Identities=26% Similarity=0.315 Sum_probs=185.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||++.. +++.||+|++..+ +.+|+.++++++|+||+++++.+..++..++||||+++|+|.+++..
T Consensus 14 g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 93 (285)
T cd05605 14 GEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYN 93 (285)
T ss_pred eEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHh
Confidence 89999987 6889999988532 34699999999999999999999999999999999999999998865
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....... ......|+..
T Consensus 94 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----~~~~~~~~~~ 166 (285)
T cd05605 94 MGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE----TIRGRVGTVG 166 (285)
T ss_pred cCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC----ccccccCCCC
Confidence 44445899999999999999999999854 9999999999999999999999999987653221 1123468999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.+..++.++||||||+++|||++|+.||........ . + .+...+.. ....++...+.
T Consensus 167 y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~-~-~-------------~~~~~~~~-~~~~~~~~~~~ 230 (285)
T cd05605 167 YMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK-R-E-------------EVERRVKE-DQEEYSEKFSE 230 (285)
T ss_pred ccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH-H-H-------------HHHHHhhh-cccccCcccCH
Confidence 9999999988899999999999999999999999864322110 0 0 00000000 11123344556
Q ss_pred HHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
.+.+|+.+||+.||++|| ++++++++
T Consensus 231 ~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 231 AARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 689999999999999999 88888776
No 109
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6e-34 Score=289.62 Aligned_cols=235 Identities=23% Similarity=0.401 Sum_probs=184.6
Q ss_pred ceEEEeee--C---CcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--G---GDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~---~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. + +..+|+|.++. .+.+|+.++++++||||+++++++.+++..++||||+++++|.+++.
T Consensus 18 g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 97 (267)
T cd05066 18 GEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLR 97 (267)
T ss_pred CceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHH
Confidence 89999986 2 23799998864 24678999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
.... .+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.................++.
T Consensus 98 ~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 173 (267)
T cd05066 98 KHDG-QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 173 (267)
T ss_pred hcCC-CCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccce
Confidence 5433 4899999999999999999999854 99999999999999999999999999986644322111112223356
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
.|+|||.+.+..++.++|+||||+++||+++ |..||....... ....+.. . .....+...
T Consensus 174 ~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~~~~~----------------~-~~~~~~~~~ 234 (267)
T cd05066 174 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIKAIEE----------------G-YRLPAPMDC 234 (267)
T ss_pred eecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHHHHhC----------------C-CcCCCCCCC
Confidence 8999999998889999999999999999887 998875332211 1111110 0 000112223
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
+..+.+++.+||+.+|.+||++.++++.|.++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 235 PAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 45689999999999999999999999999875
No 110
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.3e-34 Score=300.84 Aligned_cols=226 Identities=26% Similarity=0.405 Sum_probs=180.4
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +++.||||.++.+ +..|..++.++ +||||+++++++.+.+..|+||||+++|+|.+++.
T Consensus 9 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~ 88 (320)
T cd05590 9 GKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQ 88 (320)
T ss_pred eEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHH
Confidence 89999987 5789999988642 23577777766 69999999999999999999999999999999886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++...... .......||+
T Consensus 89 ~~~--~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---~~~~~~~gt~ 160 (320)
T cd05590 89 KSR--RFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG---KTTSTFCGTP 160 (320)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC---CcccccccCc
Confidence 543 3899999999999999999999855 9999999999999999999999999987532221 1223457899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||....... . ...+.... ...+...+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--~----------------~~~i~~~~--~~~~~~~~ 220 (320)
T cd05590 161 DYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD--L----------------FEAILNDE--VVYPTWLS 220 (320)
T ss_pred cccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH--H----------------HHHHhcCC--CCCCCCCC
Confidence 9999999998889999999999999999999999986433221 1 11111111 11223345
Q ss_pred HHHHHHHHHhhhcCCCCCCCH------HHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAM------DKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~------~evl~~ 615 (635)
..+.+++.+||+.||++||++ ++++++
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 221 QDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred HHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 568999999999999999998 555544
No 111
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-34 Score=288.00 Aligned_cols=243 Identities=25% Similarity=0.337 Sum_probs=197.5
Q ss_pred ceEEEeeeC--CcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKIG--GDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~~--~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|+||.+++. +...|+|++.++ +..|-+||+.++||.++.|++.+..++..|++||||+||+|...+++
T Consensus 91 G~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~Lrqk 170 (459)
T KOG0610|consen 91 GTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQK 170 (459)
T ss_pred eeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhh
Confidence 999999994 479999999653 34588999999999999999999999999999999999999999988
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc---------------
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ--------------- 494 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~--------------- 494 (635)
+.++.+++..+.-++.+++.||+|||-.| ||.|||||+||||.++|.+-|+||.++......
T Consensus 171 Qp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~ 247 (459)
T KOG0610|consen 171 QPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQ 247 (459)
T ss_pred CCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCC
Confidence 88888999999999999999999999966 999999999999999999999999987532110
Q ss_pred -----------------C-C--------------------ceeeecccccCCCccCccccccCCCCcccchhhHHHHHHH
Q 042486 495 -----------------E-G--------------------EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLE 536 (635)
Q Consensus 495 -----------------~-~--------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~e 536 (635)
. . ....+..++||..|+|||++.+...+.+.|.|+||+++||
T Consensus 248 ~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYE 327 (459)
T KOG0610|consen 248 PSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYE 327 (459)
T ss_pred cccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHH
Confidence 0 0 0012234689999999999999999999999999999999
Q ss_pred HHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCC----HHHH
Q 042486 537 MLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA----MDKI 612 (635)
Q Consensus 537 lltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~ev 612 (635)
|+.|..||...+. ++.+..++...+.-...+..+....+||++.|..||++|.. +.||
T Consensus 328 mLyG~TPFKG~~~------------------~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 328 MLYGTTPFKGSNN------------------KETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred HHhCCCCcCCCCc------------------hhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 9999999865433 33344444333322222355667899999999999999988 7777
Q ss_pred HHHHHHHHhhcccccc
Q 042486 613 AQSISRFLNASLAWEL 628 (635)
Q Consensus 613 l~~L~~~~~~s~~w~~ 628 (635)
-+| -+-+.+.|.-
T Consensus 390 K~H---pFF~gVnWaL 402 (459)
T KOG0610|consen 390 KRH---PFFEGVNWAL 402 (459)
T ss_pred hcC---ccccCCChhh
Confidence 665 3344566653
No 112
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7.7e-34 Score=287.05 Aligned_cols=234 Identities=26% Similarity=0.405 Sum_probs=183.8
Q ss_pred ceEEEeee--CC---cEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GG---DFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~---~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|++ .+ ..+|+|.+..+ +.+|++++++++|+||+++++++. .+..++||||+++|+|.+++.
T Consensus 9 g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~ 87 (257)
T cd05060 9 GSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLK 87 (257)
T ss_pred eeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHH
Confidence 89999987 22 68999987643 446899999999999999999875 456799999999999999997
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++................++.
T Consensus 88 ~~~--~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~ 162 (257)
T cd05060 88 KRR--EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPL 162 (257)
T ss_pred hCC--CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccc
Confidence 554 4899999999999999999999854 99999999999999999999999999986643322111111223456
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+... .....+...
T Consensus 163 ~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~~~~~~~-----------------~~~~~~~~~ 223 (257)
T cd05060 163 KWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVIAMLESG-----------------ERLPRPEEC 223 (257)
T ss_pred cccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcC-----------------CcCCCCCCC
Confidence 7999999998889999999999999999998 88887543221 111111110 001122334
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
+..+.+++.+||..+|++||++.++++.|+++.
T Consensus 224 ~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 224 PQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 456899999999999999999999999998753
No 113
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5e-34 Score=314.08 Aligned_cols=231 Identities=19% Similarity=0.279 Sum_probs=183.4
Q ss_pred ceEEEeee--C-CcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc-
Q 042486 362 GSVYRGKI--G-GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK- 430 (635)
Q Consensus 362 g~Vy~g~~--~-~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~- 430 (635)
|.||++.. + +..||+|.+.. .+.+|+.+|++++||||+++++++..++..|+||||+++|+|.+++...
T Consensus 81 g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~ 160 (478)
T PTZ00267 81 TAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRL 160 (478)
T ss_pred cEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHH
Confidence 89999976 3 67788887643 2457999999999999999999999999999999999999999988532
Q ss_pred -CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 431 -GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 431 -~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....... ........||+.
T Consensus 161 ~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~-~~~~~~~~gt~~ 236 (478)
T PTZ00267 161 KEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-LDVASSFCGTPY 236 (478)
T ss_pred hccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc-cccccccCCCcc
Confidence 234588999999999999999999985 499999999999999999999999999986543221 112334579999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.+..++.++|||||||++|||++|+.||....... .+..+..... ...+...+.
T Consensus 237 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~------------------~~~~~~~~~~-~~~~~~~s~ 297 (478)
T PTZ00267 237 YLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE------------------IMQQVLYGKY-DPFPCPVSS 297 (478)
T ss_pred ccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------------------HHHHHHhCCC-CCCCccCCH
Confidence 999999998899999999999999999999999985432211 1111111110 012223445
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+.+++.+||+.||++||++++++.+
T Consensus 298 ~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 298 GMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHhC
Confidence 68999999999999999999998754
No 114
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=9.8e-34 Score=287.48 Aligned_cols=236 Identities=24% Similarity=0.338 Sum_probs=188.4
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+|.. +++.||+|.++. .+.+|++++++++|+|++++++++..++..++||||+++++|.+++..
T Consensus 16 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 95 (267)
T cd08224 16 SVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKH 95 (267)
T ss_pred eEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHH
Confidence 89999988 688999997742 355799999999999999999999999999999999999999998853
Q ss_pred --cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 430 --KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 430 --~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.....+++.++..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||++........ ......++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~ 169 (267)
T cd08224 96 FKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT---AAHSLVGT 169 (267)
T ss_pred hcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccCCCc---ccceecCC
Confidence 22345899999999999999999999855 99999999999999999999999999875543221 11234578
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh-H
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP-V 586 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~-~ 586 (635)
..|+|||.+.+..++.++||||||+++|+|++|+.|+...........+. +.... ....+. .
T Consensus 170 ~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----------------~~~~~-~~~~~~~~ 232 (267)
T cd08224 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK----------------IEKCD-YPPLPADH 232 (267)
T ss_pred ccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhh----------------hhcCC-CCCCChhh
Confidence 89999999988889999999999999999999999875322111111111 00000 111111 3
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
.+..+.+++.+||..+|++||++.+|++.|+++.
T Consensus 233 ~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 233 YSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred cCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 4556899999999999999999999999998864
No 115
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.8e-34 Score=307.21 Aligned_cols=232 Identities=21% Similarity=0.266 Sum_probs=180.6
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||||+++.. +.+|+++|++++|+||+++++++.+++..|+||||+++|+|.+++..
T Consensus 15 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~ 94 (364)
T cd05599 15 GEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK 94 (364)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHH
Confidence 89999987 6889999998642 34699999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCce-----------
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF----------- 498 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~----------- 498 (635)
.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..........
T Consensus 95 ~~--~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~ 169 (364)
T cd05599 95 KD--TFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPS 169 (364)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccc
Confidence 43 3899999999999999999999855 9999999999999999999999999987542211000
Q ss_pred ------------------------eeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHH
Q 042486 499 ------------------------ALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLL 554 (635)
Q Consensus 499 ------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l 554 (635)
.......||+.|+|||++....++.++|||||||++|||++|+.||........ .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~-~ 248 (364)
T cd05599 170 NFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQET-Y 248 (364)
T ss_pred cccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHH-H
Confidence 001124689999999999988899999999999999999999999864332111 1
Q ss_pred HHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCC---HHHHHHH
Q 042486 555 VDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA---MDKIAQS 615 (635)
Q Consensus 555 ~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 615 (635)
...... . ..+........+..+.+++.+|+. +|.+|++ ++|++++
T Consensus 249 ~~i~~~----~-----------~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 249 RKIINW----K-----------ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred HHHHcC----C-----------CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 111000 0 000000011124457899999996 9999998 8888775
No 116
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.7e-34 Score=292.25 Aligned_cols=234 Identities=24% Similarity=0.279 Sum_probs=183.9
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.+|+|.+..+ ...|++++++++||||+++++++.++...++||||+++++|.+++..
T Consensus 7 g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~ 86 (277)
T cd05607 7 GEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYN 86 (277)
T ss_pred eEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHh
Confidence 89999987 6899999988531 23589999999999999999999999999999999999999998865
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ......|+..
T Consensus 87 ~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~----~~~~~~~~~~ 159 (277)
T cd05607 87 VGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK----TITQRAGTNG 159 (277)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc----eeeccCCCCC
Confidence 55555899999999999999999999854 9999999999999999999999999987654321 1123468899
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.+..++.++|||||||++|||++|+.||........ ... ............ .....+.
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~~-------------~~~~~~~~~~~~-~~~~~~~ 224 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KEE-------------LKRRTLEDEVKF-EHQNFTE 224 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HHH-------------HHHHhhcccccc-ccccCCH
Confidence 9999999988899999999999999999999999854322110 000 111111111110 0112345
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.+.+++.+||+.||++||++.|+++.+.
T Consensus 225 ~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 225 ESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred HHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 5899999999999999999977664433
No 117
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-35 Score=302.66 Aligned_cols=238 Identities=24% Similarity=0.379 Sum_probs=198.1
Q ss_pred ceEEEeee--CCcEEEEEEeccC------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK 433 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~ 433 (635)
|.||.|.| -.-.||||.++++ |..|..+|+.++|||+|+|+|+|..+..+|||.|||..|+|.+||++....
T Consensus 281 GeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ 360 (1157)
T KOG4278|consen 281 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRS 360 (1157)
T ss_pred cceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchh
Confidence 79999999 4568999999875 668999999999999999999999999999999999999999999877666
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCc
Q 042486 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAP 513 (635)
Q Consensus 434 ~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP 513 (635)
.++....+.++.||..|++||.. +.+|||||..+|+|+.++..+|++|||+++.+...... ..........|.||
T Consensus 361 ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT--AHAGAKFPIKWTAP 435 (1157)
T KOG4278|consen 361 EVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT--AHAGAKFPIKWTAP 435 (1157)
T ss_pred hcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcCCcee--cccCccCcccccCc
Confidence 68888899999999999999998 45999999999999999999999999999987654311 11112345679999
Q ss_pred cccccCCCCcccchhhHHHHHHHHHhCC-CCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 514 EYLENGLVSTKLDVYAFGVLMLEMLSGK-EAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 514 E~~~~~~~s~ksDV~SlGvvl~elltG~-~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
|.+....++.|+|||+|||+|||+.|.. .|+...+ ...+-.++....+-+.|..++..+.
T Consensus 436 EsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-------------------lSqVY~LLEkgyRM~~PeGCPpkVY 496 (1157)
T KOG4278|consen 436 ESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-------------------LSQVYGLLEKGYRMDGPEGCPPKVY 496 (1157)
T ss_pred ccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-------------------HHHHHHHHhccccccCCCCCCHHHH
Confidence 9999999999999999999999999854 4432211 1112223333344455667778899
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
+|++.||+..|.+||++.|+-+.++.++.++
T Consensus 497 eLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 497 ELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred HHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 9999999999999999999999999998765
No 118
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.2e-35 Score=289.83 Aligned_cols=243 Identities=26% Similarity=0.352 Sum_probs=184.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC---hHHHHHHHhhhccCCcccEEEEEecC--C---eeEEEeecccCCCcchhhccc-
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---ASDQIKLLNKINHSSLIRLLGICFNG--G---NWYLVYENAVNGSLSVWINDK- 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---~~~E~~~l~~l~h~nIv~l~~~~~~~--~---~~~lV~E~~~~gsL~~~l~~~- 430 (635)
|.||+|+. ++..||||++-.+ -.+|+++|+++.|||||+|.-+|... + ...+||||++. +|.+.++..
T Consensus 38 g~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~ 116 (364)
T KOG0658|consen 38 GVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYT 116 (364)
T ss_pred ceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHh
Confidence 89999998 6789999999654 34899999999999999999988742 2 24789999986 888888631
Q ss_pred -CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC-CcEEEeeecCcccccccCCceeeecccccCC
Q 042486 431 -GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 431 -~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
.+..++...+.-+..||++||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+.....+.. .....|.
T Consensus 117 ~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn----iSYicSR 189 (364)
T KOG0658|consen 117 RANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN----ISYICSR 189 (364)
T ss_pred hcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc----eeEEEec
Confidence 2234788888889999999999999955 9999999999999977 99999999999987665433 2235678
Q ss_pred CccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhh-------cCCcCC
Q 042486 509 GYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL-------MDPSMQ 580 (635)
Q Consensus 509 ~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~-------~d~~~~ 580 (635)
.|+|||.+.+ ..|+.+.||||.||++.||+-|++.|.+.+.. ..+...++ ++..... +.+..+ ..+.+.
T Consensus 190 yYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~-dQL~eIik-~lG~Pt~-e~I~~mn~~y~~~~~p~ik 266 (364)
T KOG0658|consen 190 YYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV-DQLVEIIK-VLGTPTR-EDIKSMNPNYTEFKFPQIK 266 (364)
T ss_pred cccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH-HHHHHHHH-HhCCCCH-HHHhhcCcccccccCcccc
Confidence 8999998876 67999999999999999999999887653332 22333322 2222221 111111 111111
Q ss_pred C-----CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 581 G-----NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 581 ~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
. -.....+.+..+|+.++|..+|.+|.++.|++.+
T Consensus 267 ~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 267 AHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 1 1223345668999999999999999999998865
No 119
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=286.84 Aligned_cols=244 Identities=30% Similarity=0.411 Sum_probs=186.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEec-----CCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFN-----GGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~-----~~~~~lV~E~~~~gsL~~ 425 (635)
|.|+++.. +|..||||++.+- ..+|+.+|+.++|+||+.+++.+.. -+..|+|+|+| ..+|..
T Consensus 36 GvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~ 114 (359)
T KOG0660|consen 36 GVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQ 114 (359)
T ss_pred eeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH-hhHHHH
Confidence 89999887 7899999999743 3489999999999999999999875 34689999999 558999
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
.++.... |+......++.|++.||+|+|+.+ ++||||||+|++++.+..+||+|||+|+..... ......+..+
T Consensus 115 iik~~~~--L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-~~~~~mTeYV 188 (359)
T KOG0660|consen 115 IIKSQQD--LTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLARYLDKF-FEDGFMTEYV 188 (359)
T ss_pred HHHcCcc--ccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccceeecccc-Ccccchhcce
Confidence 8865433 899999999999999999999965 999999999999999999999999999987644 2223345578
Q ss_pred cCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhc--------C
Q 042486 506 GTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLM--------D 576 (635)
Q Consensus 506 gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~--------d 576 (635)
.|.+|+|||.+.. ..|+...||||.||++.||++|++.|.+.+.- .....+....... .++.+..+- .
T Consensus 189 aTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v--~Ql~lI~~~lGtP-~~e~l~~i~s~~ar~yi~ 265 (359)
T KOG0660|consen 189 ATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV--HQLQLILELLGTP-SEEDLQKIRSEKARPYIK 265 (359)
T ss_pred eeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH--HHHHHHHHhcCCC-CHHHHHHhccHHHHHHHH
Confidence 8999999998764 67999999999999999999999887653322 2222222222222 122222221 1
Q ss_pred --CcCCC-C---CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 577 --PSMQG-N---YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 577 --~~~~~-~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+.... . .-+.......+|+++||..||.+|+|++|.++|
T Consensus 266 slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 266 SLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred hCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11000 0 001234457899999999999999999999986
No 120
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.8e-34 Score=300.48 Aligned_cols=235 Identities=21% Similarity=0.336 Sum_probs=182.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +++.||+|.++.+ +..|..++.++ +||||+++++++.+++..|+||||+++|+|.+++.
T Consensus 9 g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~ 88 (329)
T cd05588 9 AKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQ 88 (329)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHH
Confidence 89999987 6789999998642 34677888888 79999999999999999999999999999999886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++...... .......||.
T Consensus 89 ~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~ 160 (329)
T cd05588 89 RQR--KLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG---DTTSTFCGTP 160 (329)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCC---CccccccCCc
Confidence 543 3899999999999999999999854 9999999999999999999999999987432211 1123357899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||......... ...........+.... ...|...+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~~p~~~~ 229 (329)
T cd05588 161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNP---------DQNTEDYLFQVILEKQ--IRIPRSLS 229 (329)
T ss_pred cccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccc---------cccchHHHHHHHHcCC--CCCCCCCC
Confidence 999999999989999999999999999999999998532111000 0000000111111111 12233445
Q ss_pred HHHHHHHHHhhhcCCCCCCC------HHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPA------MDKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs------~~evl~~ 615 (635)
..+.+++.+||+.||.+||+ +++++++
T Consensus 230 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 230 VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 56899999999999999997 5677655
No 121
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.2e-34 Score=300.39 Aligned_cols=225 Identities=27% Similarity=0.386 Sum_probs=177.6
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHH---HhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKL---LNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~---l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||++.. +++.||||.++.. +.+|+++ +++++||||+++++++.+.+..|+||||+++|+|..+
T Consensus 13 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~ 92 (324)
T cd05589 13 GKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMH 92 (324)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHH
Confidence 89999987 6889999998642 2234443 4567899999999999999999999999999999988
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g 506 (635)
+... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++...... .......|
T Consensus 93 ~~~~---~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~g 163 (324)
T cd05589 93 IHTD---VFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG---DRTSTFCG 163 (324)
T ss_pred hhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCCC---Cccccccc
Confidence 8543 3899999999999999999999854 9999999999999999999999999987432221 11234578
Q ss_pred CCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 507 t~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
++.|+|||.+.+..++.++|||||||++|||++|+.||...+... ....+.... ...+..
T Consensus 164 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~------------------~~~~i~~~~--~~~p~~ 223 (324)
T cd05589 164 TPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE------------------VFDSIVNDE--VRYPRF 223 (324)
T ss_pred CccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH------------------HHHHHHhCC--CCCCCC
Confidence 999999999999889999999999999999999999986432221 111111111 112333
Q ss_pred HHHHHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
.+..+.+++.+||+.||.+|| ++.+++++
T Consensus 224 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 224 LSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 455688999999999999999 56676664
No 122
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-35 Score=275.54 Aligned_cols=242 Identities=24% Similarity=0.288 Sum_probs=187.0
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCC-----eeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGG-----NWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~lV~E~~~~gsL~~~l 427 (635)
..||.++. +++.+|+|++.- ...+|++..++++|||+++++++...+. +.||+++|+..|+|.+.+
T Consensus 35 sfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i 114 (302)
T KOG2345|consen 35 SFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEI 114 (302)
T ss_pred eeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHH
Confidence 46777764 888999999842 2567999999999999999999876433 479999999999999999
Q ss_pred cc--cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCcee------
Q 042486 428 ND--KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA------ 499 (635)
Q Consensus 428 ~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~------ 499 (635)
.. .++..+++.++++|+.+|++||++||+.. +++.||||||.||++.+.+.++|.|||.++...-.-....
T Consensus 115 ~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQ 193 (302)
T KOG2345|consen 115 ERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQ 193 (302)
T ss_pred HHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHH
Confidence 54 34456999999999999999999999976 7899999999999999999999999999986543211100
Q ss_pred eecccccCCCccCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcC
Q 042486 500 LTSHIVGTKGYMAPEYLE---NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD 576 (635)
Q Consensus 500 ~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d 576 (635)
.-.....|..|+|||.+. +...++++|||||||+||+|+.|..||+..-+.+. ..--++..
T Consensus 194 e~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg----------------SlaLAv~n 257 (302)
T KOG2345|consen 194 EWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG----------------SLALAVQN 257 (302)
T ss_pred HHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC----------------eEEEeeec
Confidence 001235688999999886 45678999999999999999999999863211110 00111122
Q ss_pred CcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 577 PSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 577 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
+.+........+..+.+++++|++.||.+||++.+++.++..++
T Consensus 258 ~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 258 AQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred cccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 22211112226677999999999999999999999999998764
No 123
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6e-34 Score=288.36 Aligned_cols=232 Identities=26% Similarity=0.450 Sum_probs=183.5
Q ss_pred ceEEEeee-CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||++.. ++..+|+|.++. ++.+|+.++++++|+|++++++++. .+..+++|||+++++|.+++.......
T Consensus 20 ~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~ 98 (260)
T cd05070 20 GEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRA 98 (260)
T ss_pred ceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCC
Confidence 89999987 567899998864 3568999999999999999999874 456899999999999999997654455
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.+++.||.|||+.+ ++||||||+||++++++.++|+|||++........ .......++..|+|||
T Consensus 99 ~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE 173 (260)
T cd05070 99 LKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY--TARQGAKFPIKWTAPE 173 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc--ccccCCCCCccccChH
Confidence 899999999999999999999854 99999999999999999999999999976543221 1111223556799999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
.+.+..++.++||||||+++|||++ |..||...... ...+... .......+...+..+.+
T Consensus 174 ~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~~~ 234 (260)
T cd05070 174 AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQVE-----------------RGYRMPCPQDCPISLHE 234 (260)
T ss_pred HHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHH-----------------cCCCCCCCCcCCHHHHH
Confidence 9988889999999999999999999 77776432211 1111111 01111223344566999
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
++.+||+.||++|||++++.+.|+.
T Consensus 235 li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 235 LMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999999998875
No 124
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7e-35 Score=304.57 Aligned_cols=222 Identities=23% Similarity=0.352 Sum_probs=179.4
Q ss_pred ceEEEeee-----CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI-----GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~-----~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+++. +++.+|+|.++.. +..|+++|++++|+||+++++++.+++..|+||||+++|+|.+++
T Consensus 10 g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l 89 (318)
T cd05582 10 GKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL 89 (318)
T ss_pred EEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHH
Confidence 89998764 5789999988642 346899999999999999999999999999999999999999998
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.... .+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++....... ......|+
T Consensus 90 ~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~g~ 161 (318)
T cd05582 90 SKEV--MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK---KAYSFCGT 161 (318)
T ss_pred HHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC---ceecccCC
Confidence 6543 3899999999999999999999855 99999999999999999999999999875433211 12345789
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
..|+|||.+.+..++.++||||||+++|||++|+.||....... . ...+.... ...+...
T Consensus 162 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~----------------~~~i~~~~--~~~p~~~ 221 (318)
T cd05582 162 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE--T----------------MTMILKAK--LGMPQFL 221 (318)
T ss_pred hhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH--H----------------HHHHHcCC--CCCCCCC
Confidence 99999999998888999999999999999999999986432211 1 11111111 1123334
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDK 611 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~e 611 (635)
+..+.+++.+||+.||++||++.+
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCC
Confidence 456889999999999999999655
No 125
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-34 Score=287.19 Aligned_cols=226 Identities=25% Similarity=0.387 Sum_probs=187.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.|-++.. .|+.||||.++++ +.+|+++|+.|+||||+.++.+|++.+...|||||..+|.|.+|+.+
T Consensus 67 GKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSe 146 (668)
T KOG0611|consen 67 GKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISE 146 (668)
T ss_pred cceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHH
Confidence 66766654 7899999988653 46899999999999999999999999999999999999999999976
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.+. |++.+..+++.||..|+.|+|+.+ ++|||||.+|||+|.|+++||+|||++..+.... ....++|++-
T Consensus 147 r~~--LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~~k----fLqTFCGSPL 217 (668)
T KOG0611|consen 147 RGS--LSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYADKK----FLQTFCGSPL 217 (668)
T ss_pred hcc--ccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcccc----HHHHhcCCcc
Confidence 654 999999999999999999999854 9999999999999999999999999997665432 2345799999
Q ss_pred ccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 510 YMAPEYLENGLV-STKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 510 y~aPE~~~~~~~-s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
|.+||++.+..| .+..|-||||++||-|+.|..||+..+... + ++++...... .+..+
T Consensus 218 YASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~--l----------------vrQIs~GaYr---EP~~P 276 (668)
T KOG0611|consen 218 YASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR--L----------------VRQISRGAYR---EPETP 276 (668)
T ss_pred cCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH--H----------------HHHhhccccc---CCCCC
Confidence 999999998766 689999999999999999999987544322 1 1222221111 11122
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
....-||++||..+|++|.|+.+|..|.-
T Consensus 277 SdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 277 SDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred chHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 23567999999999999999999998853
No 126
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=6.9e-34 Score=291.98 Aligned_cols=251 Identities=23% Similarity=0.414 Sum_probs=187.4
Q ss_pred ceEEEeee------CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecC--CeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI------GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNG--GNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~------~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~ 425 (635)
|.||.+++ ++..||+|.++. .+.+|++++++++|+||+++.+++... ...++||||+++++|.+
T Consensus 18 g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~ 97 (284)
T cd05079 18 GKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKE 97 (284)
T ss_pred eeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHH
Confidence 89998874 577899999863 355799999999999999999999865 56799999999999999
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++................
T Consensus 98 ~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 173 (284)
T cd05079 98 YLPRNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLD 173 (284)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCC
Confidence 996543 2489999999999999999999984 599999999999999999999999999986644332222223455
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
++..|+|||.+.+..++.++||||||+++|||++++.|....... ......+... +.........+........+.
T Consensus 174 ~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 249 (284)
T cd05079 174 SPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMIGPTHG-QMTVTRLVRVLEEGKRLPRPP 249 (284)
T ss_pred CCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhcccccc-cccHHHHHHHHHcCccCCCCC
Confidence 677899999998888999999999999999999987654221110 0000000000 000011111111111112233
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
..+..+.+|+.+||+.||++||+++++++.|+.++
T Consensus 250 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~ 284 (284)
T cd05079 250 NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284 (284)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence 34567999999999999999999999999998763
No 127
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.2e-34 Score=292.10 Aligned_cols=230 Identities=26% Similarity=0.408 Sum_probs=179.7
Q ss_pred ceEEEeee--CCcEEEEEEecc------ChHHHHHHHhhh-ccCCcccEEEEEecC------CeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG------DASDQIKLLNKI-NHSSLIRLLGICFNG------GNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~------~~~~E~~~l~~l-~h~nIv~l~~~~~~~------~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|.. +++.||+|.+.. ++.+|+.+++++ +|+||+++++++... ...+++|||+.+++|.++
T Consensus 20 g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~ 99 (272)
T cd06637 20 GQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 99 (272)
T ss_pred eEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHH
Confidence 89999987 678999998853 356789999998 799999999998753 457999999999999999
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g 506 (635)
+.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++........ ......|
T Consensus 100 l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~g 173 (272)
T cd06637 100 IKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG---RRNTFIG 173 (272)
T ss_pred HHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCceecccccc---cCCcccc
Confidence 97654455899999999999999999999854 99999999999999999999999999875433211 1233568
Q ss_pred CCCccCccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCC
Q 042486 507 TKGYMAPEYLE-----NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQG 581 (635)
Q Consensus 507 t~~y~aPE~~~-----~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~ 581 (635)
+..|+|||++. +..++.++|||||||++|||++|+.|+............ .. .....
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~---------------~~---~~~~~ 235 (272)
T cd06637 174 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---------------PR---NPAPR 235 (272)
T ss_pred cccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH---------------hc---CCCCC
Confidence 89999999986 345788999999999999999999987532221111000 00 00000
Q ss_pred CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 582 NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 582 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+...+..+.+++.+||..||.+||+++|++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 236 LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 1112234458999999999999999999999864
No 128
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5e-34 Score=303.71 Aligned_cols=233 Identities=21% Similarity=0.266 Sum_probs=177.1
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|+||+++. +++.||||.++. .+.+|+.++.+++|+||+++++.+.+++..|+||||+++|+|.+++..
T Consensus 15 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 94 (363)
T cd05628 15 GEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK 94 (363)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh
Confidence 89999987 688999999864 245689999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc------------
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE------------ 497 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~------------ 497 (635)
.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 95 ~~--~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~ 169 (363)
T cd05628 95 KD--TLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPS 169 (363)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccc
Confidence 43 3899999999999999999999855 999999999999999999999999998754321100
Q ss_pred --------------------eeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHh
Q 042486 498 --------------------FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557 (635)
Q Consensus 498 --------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~ 557 (635)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~-~~~~i 248 (363)
T cd05628 170 DFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQE-TYKKV 248 (363)
T ss_pred cccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 000123479999999999998889999999999999999999999986433211 11111
Q ss_pred hhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhh--cCCCCCCCHHHHHHH
Q 042486 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLK--KDPSGRPAMDKIAQS 615 (635)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~evl~~ 615 (635)
... . ..+ .+... ...+..+.+++.+++. .++..||+++||+++
T Consensus 249 ~~~----~------~~~---~~p~~--~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 249 MNW----K------ETL---IFPPE--VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred HcC----c------Ccc---cCCCc--CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 000 0 000 00000 0123446777777554 233456899999887
No 129
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.3e-34 Score=300.04 Aligned_cols=235 Identities=23% Similarity=0.353 Sum_probs=181.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +++.+|+|.++.. +.+|+.++.++ +||||+++++++..++..++||||+++|+|..++.
T Consensus 9 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~ 88 (329)
T cd05618 9 AKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ 88 (329)
T ss_pred eEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHH
Confidence 89999987 6789999998643 33577777776 89999999999999999999999999999998886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... .......||.
T Consensus 89 ~~~--~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---~~~~~~~gt~ 160 (329)
T cd05618 89 RQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---DTTSTFCGTP 160 (329)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC---CccccccCCc
Confidence 543 3899999999999999999999855 9999999999999999999999999987532211 1123457899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||......... ...........+.... ...|...+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~---------~~~~~~~~~~~i~~~~--~~~p~~~~ 229 (329)
T cd05618 161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP---------DQNTEDYLFQVILEKQ--IRIPRSLS 229 (329)
T ss_pred cccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCc---------ccccHHHHHHHHhcCC--CCCCCCCC
Confidence 999999999999999999999999999999999998532111000 0000000111111111 12334445
Q ss_pred HHHHHHHHHhhhcCCCCCCC------HHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPA------MDKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs------~~evl~~ 615 (635)
..+.+++.+||+.||++||+ +.++++|
T Consensus 230 ~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 230 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 66889999999999999998 4676655
No 130
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.2e-33 Score=289.26 Aligned_cols=240 Identities=25% Similarity=0.399 Sum_probs=185.5
Q ss_pred ceEEEeee--CCc----EEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGD----FVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~----~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|++ +++ .||+|.++.+ +.+|+.+++.++|+||+++++++.. ...++++||+++|+|.+++
T Consensus 21 g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l 99 (279)
T cd05109 21 GTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYV 99 (279)
T ss_pred ceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHH
Confidence 89999986 444 4899988642 4468889999999999999999975 4568999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.... ..+++..++.++.|++.||.|||+. +++||||||+||++++++.+||+|||+++........ .......++
T Consensus 100 ~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~-~~~~~~~~~ 174 (279)
T cd05109 100 RENK-DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE-YHADGGKVP 174 (279)
T ss_pred hhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecccccce-eecCCCccc
Confidence 6543 2489999999999999999999984 5999999999999999999999999999866432211 111222346
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
..|+|||.+.+..++.++||||||+++|||++ |..|+....... +...+.. ......+..
T Consensus 175 ~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~-----------------~~~~~~~~~ 235 (279)
T cd05109 175 IKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--IPDLLEK-----------------GERLPQPPI 235 (279)
T ss_pred hhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHC-----------------CCcCCCCcc
Confidence 78999999988889999999999999999998 787765322111 1111111 001111223
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcccc
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAW 626 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w 626 (635)
.+..+.+++.+||+.||++||++.|+++.|+++......|
T Consensus 236 ~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~~~ 275 (279)
T cd05109 236 CTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPSRF 275 (279)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCcCe
Confidence 3456889999999999999999999999999887665444
No 131
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.7e-34 Score=291.74 Aligned_cols=234 Identities=23% Similarity=0.390 Sum_probs=184.0
Q ss_pred ceEEEeeeC-------CcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIG-------GDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~-------~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|+.. +..||||+++.+ +.+|+.++++++|+||+++++++...+..++++||+.+++|.++
T Consensus 19 g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~ 98 (283)
T cd05091 19 GKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEF 98 (283)
T ss_pred CeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHH
Confidence 899999862 468999998643 45688899999999999999999999999999999999999999
Q ss_pred hccc--------------CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccc
Q 042486 427 INDK--------------GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492 (635)
Q Consensus 427 l~~~--------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 492 (635)
+... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++...
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (283)
T cd05091 99 LVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNVKISDLGLFREVY 175 (283)
T ss_pred HHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCceEecccccccccc
Confidence 8421 1234788899999999999999999855 9999999999999999999999999987654
Q ss_pred ccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhh
Q 042486 493 RQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESL 571 (635)
Q Consensus 493 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l 571 (635)
.... ........+++.|+|||.+.++.++.++||||||+++|||++ |..|+...... .. .
T Consensus 176 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~----------------~ 236 (283)
T cd05091 176 AADY-YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DV----------------I 236 (283)
T ss_pred cchh-eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH--HH----------------H
Confidence 3221 112233456778999999988889999999999999999998 66666432221 11 1
Q ss_pred hhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 572 RHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 572 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
..+.+.. ....+...+..+.+++.+||+.+|++||+++||+..|+.
T Consensus 237 ~~i~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 EMIRNRQ-VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHcCC-cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111111 112233455668999999999999999999999999875
No 132
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.2e-33 Score=292.33 Aligned_cols=236 Identities=32% Similarity=0.466 Sum_probs=184.1
Q ss_pred ceEEEeee--CC--cEEEEEEecc--------ChHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GG--DFVAIKKVYG--------DASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~--~~vavK~~~~--------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|.. ++ ..+++|.++. ++.+|++++.++ +||||+++++++...+..++++||+++++|.+++.
T Consensus 16 g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 95 (297)
T cd05089 16 GQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLR 95 (297)
T ss_pred ceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHH
Confidence 89999987 33 2478888764 356799999999 79999999999999899999999999999999985
Q ss_pred ccC--------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 429 DKG--------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 429 ~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++......
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 172 (297)
T cd05089 96 KSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASKIADFGLSRGEEVY 172 (297)
T ss_pred hccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeEEECCcCCCccccce
Confidence 421 12488999999999999999999985 4999999999999999999999999998643211
Q ss_pred CCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhh
Q 042486 495 EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573 (635)
Q Consensus 495 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 573 (635)
. .......+..|+|||++....++.++|||||||++|||++ |+.||....... ... .
T Consensus 173 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~--~~~----------------~ 230 (297)
T cd05089 173 V----KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE--LYE----------------K 230 (297)
T ss_pred e----ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHH----------------H
Confidence 1 1111223457999999988889999999999999999998 888875332211 111 0
Q ss_pred hcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 574 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
+. .......+...+..+.+|+.+||+.||.+||+++++++.|+.+....
T Consensus 231 ~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 231 LP-QGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred Hh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 00 01111122234456899999999999999999999999999988654
No 133
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=8.5e-34 Score=286.50 Aligned_cols=234 Identities=26% Similarity=0.422 Sum_probs=185.8
Q ss_pred ceEEEeeeC---C--cEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKIG---G--DFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~~---~--~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|.+. + ..||||.+..+ +.+|++++++++|+||+++++.+.+ ...++||||+++++|.+++.
T Consensus 9 ~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~ 87 (257)
T cd05040 9 GVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLR 87 (257)
T ss_pred ccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHH
Confidence 899999872 2 26999998653 4469999999999999999999988 88899999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.................++.
T Consensus 88 ~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 164 (257)
T cd05040 88 KDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPF 164 (257)
T ss_pred hcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCc
Confidence 65434589999999999999999999984 599999999999999999999999999987654332222233355778
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
.|+|||++.+..++.++||||||+++|||++ |+.|+....... ....... .......+...
T Consensus 165 ~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~----------------~~~~~~~~~~~ 226 (257)
T cd05040 165 AWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDK----------------EGERLERPEAC 226 (257)
T ss_pred eecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHh----------------cCCcCCCCccC
Confidence 9999999998889999999999999999999 998875332221 1111100 00001112233
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 227 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 227 PQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 456899999999999999999999999875
No 134
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=7.1e-34 Score=294.87 Aligned_cols=241 Identities=29% Similarity=0.451 Sum_probs=186.7
Q ss_pred ceEEEeee--CCc--EEEEEEecc--------ChHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGD--FVAIKKVYG--------DASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~--~vavK~~~~--------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||++.+ ++. .+|+|+++. .+.+|++++.++ +|+||+++++++..++..++||||+++++|.+++.
T Consensus 21 g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 100 (303)
T cd05088 21 GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR 100 (303)
T ss_pred ceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHH
Confidence 89999986 343 468887754 245699999999 89999999999999999999999999999999985
Q ss_pred ccC--------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 429 DKG--------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 429 ~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
... ...+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++......
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 177 (303)
T cd05088 101 KSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVY 177 (303)
T ss_pred hcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcEEeCccccCcccchh
Confidence 432 23488999999999999999999985 4999999999999999999999999998643211
Q ss_pred CCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhh
Q 042486 495 EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573 (635)
Q Consensus 495 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 573 (635)
. ......++..|+|||++.+..++.++||||||+++|||+| |..||....... ..+...
T Consensus 178 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~-------------- 237 (303)
T cd05088 178 V----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEKLP-------------- 237 (303)
T ss_pred h----hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH--HHHHHh--------------
Confidence 1 1111234567999999988888999999999999999998 888875322211 111100
Q ss_pred hcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcccccc
Q 042486 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 574 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w~~ 628 (635)
. ......+...+..+.+++.+||+.+|++||++++++..|.+++.....|-.
T Consensus 238 --~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~~~ 289 (303)
T cd05088 238 --Q-GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVN 289 (303)
T ss_pred --c-CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhhhh
Confidence 0 001111222344589999999999999999999999999999877655543
No 135
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=9.8e-34 Score=286.81 Aligned_cols=232 Identities=25% Similarity=0.429 Sum_probs=185.1
Q ss_pred ceEEEeee-CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||++.. +++.||+|.+.. ++.+|+.++++++|+||+++++++ ..+..+++|||+++++|.+++.......
T Consensus 20 g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~ 98 (260)
T cd05067 20 GEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPEGIK 98 (260)
T ss_pred ceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHHHHHhcCCCC
Confidence 89999988 678999998864 356899999999999999999987 4556899999999999999986655556
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++........ .......++..|+|||
T Consensus 99 ~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y~~pe 173 (260)
T cd05067 99 LTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY--TAREGAKFPIKWTAPE 173 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc--ccccCCcccccccCHH
Confidence 899999999999999999999855 99999999999999999999999999876542211 1112234567899999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
++....++.++||||||+++|||++ |+.||....... ....... ......+...+..+.+
T Consensus 174 ~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~~ 234 (260)
T cd05067 174 AINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE--VIQNLER-----------------GYRMPRPDNCPEELYE 234 (260)
T ss_pred HhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH--HHHHHHc-----------------CCCCCCCCCCCHHHHH
Confidence 9998889999999999999999999 888875332211 1111110 0011122223456999
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
++.+||+.+|++||+++++++.|+.
T Consensus 235 li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 235 LMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHccCChhhCCCHHHHHHHhhc
Confidence 9999999999999999999999875
No 136
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.2e-33 Score=286.23 Aligned_cols=232 Identities=26% Similarity=0.448 Sum_probs=183.2
Q ss_pred ceEEEeee-CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||++.. .+..+|+|.+.. .+.+|++++++++|+|++++++++. .+..+++|||+++++|.+++.......
T Consensus 20 ~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~ 98 (260)
T cd05069 20 GEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKY 98 (260)
T ss_pred CeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCC
Confidence 89999988 445799998764 3567999999999999999999874 456799999999999999997655555
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++........ .......++..|+|||
T Consensus 99 ~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y~~Pe 173 (260)
T cd05069 99 LKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--TARQGAKFPIKWTAPE 173 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcc--cccCCCccchhhCCHH
Confidence 899999999999999999999854 99999999999999999999999999976543221 1112234567899999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
...+..++.++||||||+++|||++ |+.|+....... ....... ......+...+..+.+
T Consensus 174 ~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~~ 234 (260)
T cd05069 174 AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQVER-----------------GYRMPCPQGCPESLHE 234 (260)
T ss_pred HhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc-----------------CCCCCCCcccCHHHHH
Confidence 9988889999999999999999999 787765322211 1111110 0011122334566899
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
++.+||..||++||+++++++.|++
T Consensus 235 li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 235 LMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHccCCcccCcCHHHHHHHHhc
Confidence 9999999999999999999999875
No 137
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-34 Score=303.54 Aligned_cols=231 Identities=23% Similarity=0.270 Sum_probs=181.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||+|.++.. +.+|+.++++++|+||+++++++.+++..++||||+++|+|.+++..
T Consensus 15 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 94 (330)
T cd05601 15 GEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNR 94 (330)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHH
Confidence 89999987 7889999998642 45788899999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++........ .......||+.
T Consensus 95 ~~-~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~--~~~~~~~gt~~ 168 (330)
T cd05601 95 YE-DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM--VNSKLPVGTPD 168 (330)
T ss_pred hc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCCc--eeeecccCCcc
Confidence 43 24899999999999999999999855 99999999999999999999999999976543221 12233578999
Q ss_pred ccCccccc------cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCC
Q 042486 510 YMAPEYLE------NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNY 583 (635)
Q Consensus 510 y~aPE~~~------~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~ 583 (635)
|+|||++. ...++.++|||||||++|||++|+.||....... ........ ........
T Consensus 169 y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-~~~~i~~~---------------~~~~~~~~ 232 (330)
T cd05601 169 YIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-TYNNIMNF---------------QRFLKFPE 232 (330)
T ss_pred ccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-HHHHHHcC---------------CCccCCCC
Confidence 99999986 4567899999999999999999999985432211 11111000 00000011
Q ss_pred ChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 584 PPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 584 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
....+..+.+|+..||. +|++||++++++++
T Consensus 233 ~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 233 DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 11234558899999998 99999999999875
No 138
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.1e-34 Score=301.47 Aligned_cols=231 Identities=22% Similarity=0.337 Sum_probs=180.7
Q ss_pred ceEEEeee-----CCcEEEEEEecc-----------ChHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcc
Q 042486 362 GSVYRGKI-----GGDFVAIKKVYG-----------DASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~-----~~~~vavK~~~~-----------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~ 424 (635)
|.||+++. +++.||+|.+.. .+.+|+++++++ +|+||+++++++..++..++||||+++|+|.
T Consensus 14 g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~ 93 (332)
T cd05614 14 GKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMF 93 (332)
T ss_pred EEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHH
Confidence 89998875 578999998853 134688999999 5999999999999999999999999999999
Q ss_pred hhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccc
Q 042486 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504 (635)
Q Consensus 425 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 504 (635)
+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....... ......
T Consensus 94 ~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~--~~~~~~ 166 (332)
T cd05614 94 THLYQRD--NFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK--ERTYSF 166 (332)
T ss_pred HHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccccccCC--Cccccc
Confidence 9986543 3899999999999999999999855 99999999999999999999999999875433221 122345
Q ss_pred ccCCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCC
Q 042486 505 VGTKGYMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNY 583 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~ 583 (635)
.||..|+|||.+.+. .++.++|||||||++|||++|+.||......... ......+.. .....
T Consensus 167 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--------------~~~~~~~~~--~~~~~ 230 (332)
T cd05614 167 CGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ--------------SEVSRRILK--CDPPF 230 (332)
T ss_pred cCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH--------------HHHHHHHhc--CCCCC
Confidence 799999999998764 4788999999999999999999998543221100 000011111 01122
Q ss_pred ChHHHHHHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 584 PPVTAILVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 584 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
+...+..+.+++.+||+.||++|| ++++++++
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 231 PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 333455689999999999999999 77788766
No 139
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5.5e-34 Score=297.52 Aligned_cols=225 Identities=28% Similarity=0.429 Sum_probs=177.9
Q ss_pred ceEEEeee--CCcEEEEEEeccCh----------HHHHHHHhh-hccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGDA----------SDQIKLLNK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~~----------~~E~~~l~~-l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +++.||||.++.+. ..|..++.. .+||||+++++++..++..++||||+++|+|.+++.
T Consensus 9 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~ 88 (316)
T cd05592 9 GKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQ 88 (316)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHH
Confidence 89999987 57789999886431 235555554 489999999999999999999999999999999986
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...... .......||+
T Consensus 89 ~~~--~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---~~~~~~~gt~ 160 (316)
T cd05592 89 SSG--RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE---GKASTFCGTP 160 (316)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC---CccccccCCc
Confidence 543 389999999999999999999985 49999999999999999999999999987543222 1223457899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||...+... ... .+... ....+...+
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~--~~~----------------~i~~~--~~~~~~~~~ 220 (316)
T cd05592 161 DYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE--LFD----------------SILND--RPHFPRWIS 220 (316)
T ss_pred cccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH--HHH----------------HHHcC--CCCCCCCCC
Confidence 9999999998889999999999999999999999986433211 111 11100 112233345
Q ss_pred HHHHHHHHHhhhcCCCCCCCHH-HHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMD-KIAQ 614 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~-evl~ 614 (635)
..+.+++.+||+.||++||++. ++++
T Consensus 221 ~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 221 KEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 5688999999999999999875 5544
No 140
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.3e-34 Score=306.70 Aligned_cols=232 Identities=18% Similarity=0.228 Sum_probs=177.9
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||||++.. .+.+|++++++++|+||+++++++.+++..|+||||+++|+|.+++..
T Consensus 15 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 94 (377)
T cd05629 15 GEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK 94 (377)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh
Confidence 89999987 788999998753 245689999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc----------e-
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE----------F- 498 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~----------~- 498 (635)
.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++........ .
T Consensus 95 ~~--~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~ 169 (377)
T cd05629 95 YD--TFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSN 169 (377)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccc
Confidence 43 3889999999999999999999855 999999999999999999999999998632210000 0
Q ss_pred ---------------------------------eeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCC
Q 042486 499 ---------------------------------ALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPA 545 (635)
Q Consensus 499 ---------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~ 545 (635)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~ 249 (377)
T cd05629 170 KNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFC 249 (377)
T ss_pred ccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCC
Confidence 00012469999999999998889999999999999999999999986
Q ss_pred CCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCC---CCHHHHHHH
Q 042486 546 LYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR---PAMDKIAQS 615 (635)
Q Consensus 546 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 615 (635)
...... ........ . ..+........+..+.+++.+||. +|.+| +++.|++++
T Consensus 250 ~~~~~~-~~~~i~~~----~-----------~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 250 SENSHE-TYRKIINW----R-----------ETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred CCCHHH-HHHHHHcc----C-----------CccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 433211 11111000 0 000000011234458899999997 66665 599998876
No 141
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-33 Score=292.61 Aligned_cols=239 Identities=26% Similarity=0.451 Sum_probs=186.0
Q ss_pred ceEEEeee---------CCcEEEEEEeccC--------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCc
Q 042486 362 GSVYRGKI---------GGDFVAIKKVYGD--------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~---------~~~~vavK~~~~~--------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 423 (635)
|.||+++. ++..||+|.+..+ +.+|+.+++++ +|+||+++++++...+..+++|||+++|+|
T Consensus 29 g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 108 (304)
T cd05101 29 GQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 108 (304)
T ss_pred ceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcH
Confidence 89999974 2347999988642 45789999999 899999999999999999999999999999
Q ss_pred chhhcccC--------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 424 SVWINDKG--------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 424 ~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++
T Consensus 109 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili~~~~~~kl~D~g~~~ 185 (304)
T cd05101 109 REYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 185 (304)
T ss_pred HHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEEcCCCcEEECCCccce
Confidence 99985431 134788999999999999999999854 9999999999999999999999999998
Q ss_pred cccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCch
Q 042486 490 PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGE 568 (635)
Q Consensus 490 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 568 (635)
........ .......++..|+|||++.+..++.++||||||+++|||++ |..|+....... ....+.
T Consensus 186 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~--------- 253 (304)
T cd05101 186 DVNNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLK--------- 253 (304)
T ss_pred eccccccc-ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHH---------
Confidence 65432211 11222345678999999988889999999999999999998 666654322111 111110
Q ss_pred hhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 569 ESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 569 ~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
. ......+...+..+.+++.+||+.+|++||++.|+++.|++++...
T Consensus 254 -------~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 254 -------E-GHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred -------c-CCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 0 0011112234456899999999999999999999999999988654
No 142
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.4e-34 Score=297.56 Aligned_cols=226 Identities=27% Similarity=0.399 Sum_probs=179.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. ++..||+|.++.+ ...|..++.+. +|+||+++++++.+++..|+||||+.+|+|.+++.
T Consensus 9 g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~ 88 (316)
T cd05620 9 GKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQ 88 (316)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHH
Confidence 89999988 6789999998643 23466667654 89999999999999999999999999999999986
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... .......||.
T Consensus 89 ~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~ 160 (316)
T cd05620 89 DKG--RFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD---NRASTFCGTP 160 (316)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC---CceeccCCCc
Confidence 543 3899999999999999999999854 9999999999999999999999999987432211 1123457899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||...+... +.+.+ ... ....+...+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~--~~~~~----------------~~~--~~~~~~~~~ 220 (316)
T cd05620 161 DYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE--LFESI----------------RVD--TPHYPRWIT 220 (316)
T ss_pred CccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHHH----------------HhC--CCCCCCCCC
Confidence 9999999999899999999999999999999999986433211 11111 000 011223344
Q ss_pred HHHHHHHHHhhhcCCCCCCCHH-HHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMD-KIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~-evl~~ 615 (635)
..+.+++.+||+.||++||++. +++++
T Consensus 221 ~~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 221 KESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 5688999999999999999984 66543
No 143
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1e-33 Score=303.71 Aligned_cols=237 Identities=23% Similarity=0.405 Sum_probs=185.6
Q ss_pred ceEEEeeeC-------CcEEEEEEeccC--------hHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKIG-------GDFVAIKKVYGD--------ASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~~-------~~~vavK~~~~~--------~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
|.||+|++. +..||||+++.. +.+|+++|.++. |+||++++++|...+..++||||+++|+|.+
T Consensus 51 G~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~ 130 (401)
T cd05107 51 GRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVD 130 (401)
T ss_pred eeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHH
Confidence 899999863 358999999643 446999999997 9999999999999899999999999999999
Q ss_pred hhcccC--------------------------------------------------------------------------
Q 042486 426 WINDKG-------------------------------------------------------------------------- 431 (635)
Q Consensus 426 ~l~~~~-------------------------------------------------------------------------- 431 (635)
+++...
T Consensus 131 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (401)
T cd05107 131 YLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYE 210 (401)
T ss_pred HHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcC
Confidence 985421
Q ss_pred ----------------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 432 ----------------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 432 ----------------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
...+++..+..++.|++.||.|||+ ++++||||||+||++++++.+||+|||+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiLl~~~~~~kL~DfGla~ 287 (401)
T cd05107 211 SPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLICEGKLVKICDFGLAR 287 (401)
T ss_pred CchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEEEeCCCEEEEEecCcce
Confidence 1236788889999999999999998 459999999999999999999999999997
Q ss_pred cccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCch
Q 042486 490 PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGE 568 (635)
Q Consensus 490 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 568 (635)
........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.|+........ ..
T Consensus 288 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-~~------------- 352 (401)
T cd05107 288 DIMRDSNY-ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-FY------------- 352 (401)
T ss_pred eccccccc-ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-HH-------------
Confidence 54322111 11122356788999999998889999999999999999998 7777643222111 11
Q ss_pred hhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 569 ESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 569 ~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
..+........+...+..+.+++.+||..+|.+||+++||++.|++++
T Consensus 353 ----~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 353 ----NAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ----HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111111111223334566899999999999999999999999999876
No 144
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=5.5e-34 Score=305.35 Aligned_cols=233 Identities=21% Similarity=0.287 Sum_probs=178.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|+||+++. +++.||||++... +.+|++++++++|+||+++++++.+++..++||||+++|+|.+++..
T Consensus 15 g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 94 (381)
T cd05626 15 GEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR 94 (381)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHh
Confidence 89999987 6789999998532 45789999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc------------
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE------------ 497 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~------------ 497 (635)
.. .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 95 ~~--~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~ 169 (381)
T cd05626 95 ME--VFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQD 169 (381)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccccccccccc
Confidence 43 3889999999999999999999855 999999999999999999999999997533110000
Q ss_pred --------------------------------eeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCC
Q 042486 498 --------------------------------FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPA 545 (635)
Q Consensus 498 --------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~ 545 (635)
........||..|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~ 249 (381)
T cd05626 170 SMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFL 249 (381)
T ss_pred ccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCc
Confidence 001123479999999999998889999999999999999999999986
Q ss_pred CCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHH--hhhcCCCCCCCHHHHHHH
Q 042486 546 LYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIES--CLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 546 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~evl~~ 615 (635)
......... ..... ............+..+.+++.+ |+..+|..||+++|+++|
T Consensus 250 ~~~~~~~~~-~i~~~---------------~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 250 APTPTETQL-KVINW---------------ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred CCCHHHHHH-HHHcc---------------ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 533221111 11000 0000000111233457788887 445666679999999987
No 145
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-33 Score=285.62 Aligned_cols=228 Identities=29% Similarity=0.506 Sum_probs=182.7
Q ss_pred ceEEEeeeCCcEEEEEEeccC-----hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCC
Q 042486 362 GSVYRGKIGGDFVAIKKVYGD-----ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~~-----~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~ 436 (635)
|.||+|+.+++.||+|..+.+ +.+|+.++++++|+|++++++++..+ ..+++|||+++++|.+++.......++
T Consensus 20 g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~ 98 (254)
T cd05083 20 GAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVS 98 (254)
T ss_pred CceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCC
Confidence 899999999999999998654 56799999999999999999998654 479999999999999999765545589
Q ss_pred HHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcccc
Q 042486 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL 516 (635)
Q Consensus 437 ~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 516 (635)
+..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....... .....+..|+|||.+
T Consensus 99 ~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~y~~pe~~ 169 (254)
T cd05083 99 VIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV------DNSKLPVKWTAPEAL 169 (254)
T ss_pred HHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC------CCCCCCceecCHHHh
Confidence 999999999999999999984 49999999999999999999999999987543211 112345679999999
Q ss_pred ccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHH
Q 042486 517 ENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLI 595 (635)
Q Consensus 517 ~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li 595 (635)
.++.++.++|+||||+++|||++ |+.||....... ...... .......+...+..+.+++
T Consensus 170 ~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~~li 230 (254)
T cd05083 170 KHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE--VKECVE-----------------KGYRMEPPEGCPADVYVLM 230 (254)
T ss_pred ccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHh-----------------CCCCCCCCCcCCHHHHHHH
Confidence 88889999999999999999998 888875332211 111110 0111111223345688999
Q ss_pred HHhhhcCCCCCCCHHHHHHHHHH
Q 042486 596 ESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 596 ~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
.+||+.+|++||+++++++.|++
T Consensus 231 ~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 231 TSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHcCCChhhCcCHHHHHHHHcc
Confidence 99999999999999999998763
No 146
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=6.2e-34 Score=298.08 Aligned_cols=221 Identities=24% Similarity=0.374 Sum_probs=175.4
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHH-HHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIK-LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +++.||+|.+... +..|.. +++.++||||+++++.+.+.+..++||||+++|+|.+++.
T Consensus 9 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~ 88 (323)
T cd05575 9 GKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQ 88 (323)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHH
Confidence 89999998 6899999998642 122333 5677899999999999999999999999999999999986
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .......||+
T Consensus 89 ~~~--~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~ 160 (323)
T cd05575 89 RER--SFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS---KTTSTFCGTP 160 (323)
T ss_pred hcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCC---CccccccCCh
Confidence 543 3899999999999999999999854 9999999999999999999999999987532221 1223457899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||...+... . ...+..... ..+...+
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~----------------~~~i~~~~~--~~~~~~~ 220 (323)
T cd05575 161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE--M----------------YDNILNKPL--RLKPNIS 220 (323)
T ss_pred hhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH--H----------------HHHHHcCCC--CCCCCCC
Confidence 9999999999889999999999999999999999986432211 1 111111111 1122234
Q ss_pred HHHHHHHHHhhhcCCCCCCCHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMD 610 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~ 610 (635)
..+.+++.+||+.||++||++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 221 VSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHHhhcCHHhCCCCC
Confidence 5689999999999999999985
No 147
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.9e-33 Score=282.74 Aligned_cols=231 Identities=23% Similarity=0.429 Sum_probs=183.0
Q ss_pred ceEEEeee-CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||+|.. ++..+|+|.++.. +.+|++++++++|+||+++++++...+..++||||+++++|.+++....
T Consensus 9 g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~- 87 (250)
T cd05085 9 GEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKK- 87 (250)
T ss_pred ceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcC-
Confidence 89999987 6788999987643 4578999999999999999999999999999999999999999986543
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
..+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||++........ .......++..|+|
T Consensus 88 ~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~y~a 162 (250)
T cd05085 88 DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY--SSSGLKQIPIKWTA 162 (250)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccccc--ccCCCCCCcccccC
Confidence 2389999999999999999999985 499999999999999999999999999875432211 11112234567999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l 591 (635)
||++..+.++.++||||||+++||+++ |..||....... ....... ......+...+..+
T Consensus 163 PE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~ 223 (250)
T cd05085 163 PEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--AREQVEK-----------------GYRMSCPQKCPDDV 223 (250)
T ss_pred HHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHHc-----------------CCCCCCCCCCCHHH
Confidence 999998889999999999999999998 888875322211 0010000 00111222344568
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.+++.+||+.+|++||++.|+++.|.
T Consensus 224 ~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 224 YKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHcccCcccCCCHHHHHHHhc
Confidence 99999999999999999999999874
No 148
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-33 Score=293.85 Aligned_cols=238 Identities=27% Similarity=0.441 Sum_probs=185.3
Q ss_pred ceEEEeeeC---------CcEEEEEEeccC--------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCc
Q 042486 362 GSVYRGKIG---------GDFVAIKKVYGD--------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~~---------~~~vavK~~~~~--------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 423 (635)
|.||+++.. ...+|+|.++.+ +.+|+++++++ +|+||+++++++..++..++||||+++|+|
T Consensus 32 g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (307)
T cd05098 32 GQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 111 (307)
T ss_pred eeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcH
Confidence 799998752 246999988643 44689999999 799999999999999999999999999999
Q ss_pred chhhcccC--------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 424 SVWINDKG--------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 424 ~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
.+++.... ...+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 112 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~a~ 188 (307)
T cd05098 112 REYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR 188 (307)
T ss_pred HHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEcCCCcEEECCCcccc
Confidence 99996432 12489999999999999999999985 49999999999999999999999999987
Q ss_pred cccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCch
Q 042486 490 PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGE 568 (635)
Q Consensus 490 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 568 (635)
........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.|+.....+. ....+.
T Consensus 189 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~--~~~~~~--------- 256 (307)
T cd05098 189 DIHHIDYY-KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--LFKLLK--------- 256 (307)
T ss_pred cccccchh-hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--HHHHHH---------
Confidence 55322111 11112234568999999998889999999999999999998 777764322111 111110
Q ss_pred hhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhh
Q 042486 569 ESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 569 ~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 622 (635)
.......+...+..+.+++.+||..+|++||++.|+++.|.+++..
T Consensus 257 --------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 257 --------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred --------cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 0111122333455688999999999999999999999999998865
No 149
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-35 Score=276.32 Aligned_cols=219 Identities=27% Similarity=0.378 Sum_probs=178.5
Q ss_pred CCcEEEEEEecc---------------ChHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCC
Q 042486 370 GGDFVAIKKVYG---------------DASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK 433 (635)
Q Consensus 370 ~~~~vavK~~~~---------------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~ 433 (635)
+|...|+|++.. ...+|+.+|+++ .||+|+++.+++..+...++|+|.|+.|.|.|+|...-
T Consensus 41 t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~V-- 118 (411)
T KOG0599|consen 41 TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKV-- 118 (411)
T ss_pred cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhhe--
Confidence 677888887732 234789999998 69999999999999999999999999999999996653
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCc
Q 042486 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAP 513 (635)
Q Consensus 434 ~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP 513 (635)
.++++...+|++|+.+|++|||. ++||||||||+|||+|++.++||+|||+++....... ....+||++|+||
T Consensus 119 tlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Gek----LrelCGTPgYLAP 191 (411)
T KOG0599|consen 119 TLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEK----LRELCGTPGYLAP 191 (411)
T ss_pred eecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccceeeccCCchh----HHHhcCCCcccCh
Confidence 39999999999999999999998 4599999999999999999999999999998766542 3567999999999
Q ss_pred ccccc------CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCC--Ch
Q 042486 514 EYLEN------GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNY--PP 585 (635)
Q Consensus 514 E~~~~------~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~--~~ 585 (635)
|.+.. ..|+...|+||+||++|-|+.|.+||.- ...+ -.++.++.....-.. ..
T Consensus 192 EtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH--RkQm----------------lMLR~ImeGkyqF~speWa 253 (411)
T KOG0599|consen 192 ETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH--RKQM----------------LMLRMIMEGKYQFRSPEWA 253 (411)
T ss_pred hheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH--HHHH----------------HHHHHHHhcccccCCcchh
Confidence 98853 4578899999999999999999998731 1111 112222332222111 23
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+.+....+||.+||+.||.+|.|++|.+.|
T Consensus 254 dis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 254 DISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred hccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 345668999999999999999999999876
No 150
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=7.7e-34 Score=296.37 Aligned_cols=225 Identities=29% Similarity=0.417 Sum_probs=178.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. +++.||||.++.+ ...|..+++.. +||||+++++++.+++..++||||+++|+|.+++.
T Consensus 9 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~ 88 (316)
T cd05619 9 GKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQ 88 (316)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHH
Confidence 89999987 5789999988653 23466777654 89999999999999999999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....... ......||.
T Consensus 89 ~~~--~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~ 160 (316)
T cd05619 89 SCH--KFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA---KTCTFCGTP 160 (316)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC---ceeeecCCc
Confidence 543 3899999999999999999999854 99999999999999999999999999874322111 123356899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||...+... ....+. ...+ .++...+
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~~~~i~--------------~~~~----~~~~~~~ 220 (316)
T cd05619 161 DYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE--LFQSIR--------------MDNP----CYPRWLT 220 (316)
T ss_pred cccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--HHHHHH--------------hCCC----CCCccCC
Confidence 9999999998889999999999999999999999986433211 111100 0001 1223344
Q ss_pred HHHHHHHHHhhhcCCCCCCCHH-HHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMD-KIAQ 614 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~-evl~ 614 (635)
..+.+++.+||+.||++||++. ++.+
T Consensus 221 ~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 221 REAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 5688999999999999999997 6654
No 151
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.6e-34 Score=297.20 Aligned_cols=226 Identities=27% Similarity=0.391 Sum_probs=181.5
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. ++..||||.++.+ +..|..++..+ +|+||+++++++.+.+..|+||||+++|+|.+++.
T Consensus 9 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 88 (318)
T cd05570 9 GKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQ 88 (318)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHH
Confidence 89999988 5789999988642 23577788777 79999999999999999999999999999999886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++...... .......|+.
T Consensus 89 ~~~--~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~g~~ 160 (318)
T cd05570 89 RSG--RFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG---VTTSTFCGTP 160 (318)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC---CcccceecCc
Confidence 543 3899999999999999999999854 9999999999999999999999999987432221 1123356899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||...+... ... .+.... ...+...+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~--~~~----------------~i~~~~--~~~~~~~~ 220 (318)
T cd05570 161 DYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE--LFQ----------------SILEDE--VRYPRWLS 220 (318)
T ss_pred cccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH--HHH----------------HHHcCC--CCCCCcCC
Confidence 9999999999999999999999999999999999986433211 111 111111 11223345
Q ss_pred HHHHHHHHHhhhcCCCCCCCH-----HHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAM-----DKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~-----~evl~~ 615 (635)
..+.+++.+||+.||++||++ .+++++
T Consensus 221 ~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 221 KEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 568999999999999999999 777765
No 152
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.2e-33 Score=287.37 Aligned_cols=246 Identities=26% Similarity=0.374 Sum_probs=189.4
Q ss_pred HHHHhhcCCCCCCccc----ceEEEeee--CCcEEEEEEeccC-------hHHHHHHHhhhccCCcccEEEEEecCCeeE
Q 042486 346 ELQAATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGD-------ASDQIKLLNKINHSSLIRLLGICFNGGNWY 412 (635)
Q Consensus 346 el~~at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~-------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 412 (635)
|++.+++++.....+| |.||+|+. ++..||+|.+... +.+|+.++++++|+||+++++++..++..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 3455667776666665 89999987 5678999987542 557899999999999999999999999999
Q ss_pred EEeecccCCCcchhhcccCCCCC--CHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC-CCcEEEeeecCcc
Q 042486 413 LVYENAVNGSLSVWINDKGGKFL--DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-DFRAKIANFALAR 489 (635)
Q Consensus 413 lV~E~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~ 489 (635)
+|+||+++++|.+++..... .+ ++..+..++.|++.||.|||+. +++||||||+||+++. ++.++|+|||++.
T Consensus 82 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWG-PLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEecCCCCCHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 99999999999999965322 24 7888899999999999999984 5999999999999976 6799999999987
Q ss_pred cccccCCceeeecccccCCCccCccccccCC--CCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc
Q 042486 490 PAERQEGEFALTSHIVGTKGYMAPEYLENGL--VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG 567 (635)
Q Consensus 490 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 567 (635)
....... ......++..|+|||++.... ++.++||||||+++|+|++|+.|+.............
T Consensus 158 ~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~---------- 224 (268)
T cd06624 158 RLAGINP---CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV---------- 224 (268)
T ss_pred ecccCCC---ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh----------
Confidence 5532211 122245788999999986543 7889999999999999999999875322211111000
Q ss_pred hhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 568 EESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 568 ~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.........+......+.+++.+||+.+|++||++.|++++
T Consensus 225 -------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 225 -------GMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred -------hhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 00001112333445668999999999999999999999875
No 153
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.4e-33 Score=285.74 Aligned_cols=235 Identities=22% Similarity=0.378 Sum_probs=179.7
Q ss_pred ceEEEeeeC--Cc--EEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecC------CeeEEEeecccCCC
Q 042486 362 GSVYRGKIG--GD--FVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNG------GNWYLVYENAVNGS 422 (635)
Q Consensus 362 g~Vy~g~~~--~~--~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~lV~E~~~~gs 422 (635)
|.||+|++. +. .+|+|.++. .+.+|++++++++|+||+++++++... ...+++|||+++|+
T Consensus 13 g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~ 92 (272)
T cd05075 13 GSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGD 92 (272)
T ss_pred ceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCc
Confidence 899999983 32 689998753 245688999999999999999988532 24689999999999
Q ss_pred cchhhcc----cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCce
Q 042486 423 LSVWIND----KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF 498 (635)
Q Consensus 423 L~~~l~~----~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 498 (635)
|.+++.. .....+++.....++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 168 (272)
T cd05075 93 LHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY- 168 (272)
T ss_pred HHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCcccccCcccce-
Confidence 9998732 1234489999999999999999999984 5999999999999999999999999999865432211
Q ss_pred eeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCC
Q 042486 499 ALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDP 577 (635)
Q Consensus 499 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~ 577 (635)
.......++..|++||.+.+..++.++||||||+++|||++ |+.||...... ...+.... .
T Consensus 169 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~----------------~ 230 (272)
T cd05075 169 RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLRQ----------------G 230 (272)
T ss_pred ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc----------------C
Confidence 11122345678999999998889999999999999999999 67776432221 11111110 0
Q ss_pred cCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 578 SMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 578 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
. ....+...+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 231 ~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 N-RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred C-CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 0011223345589999999999999999999999999875
No 154
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.4e-33 Score=285.55 Aligned_cols=233 Identities=27% Similarity=0.460 Sum_probs=185.9
Q ss_pred ceEEEeee-CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||++.. ++..+|||.+.. ++.+|+.++++++|+||+++++++..+...++||||+++++|.+++.......
T Consensus 20 ~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~ 99 (261)
T cd05034 20 GEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKK 99 (261)
T ss_pred eEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCC
Confidence 89999987 557899998864 36689999999999999999999998889999999999999999997665556
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.+++.||.|||+.+ ++|+||||+||++++++.+||+|||++........ ........+..|+|||
T Consensus 100 ~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~y~~PE 174 (261)
T cd05034 100 LRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEY--TAREGAKFPIKWTAPE 174 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhh--hhhhccCCCccccCHH
Confidence 899999999999999999999854 99999999999999999999999999876543211 1111223456899999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
.+.+..++.++|+||||++++||++ |+.|+....... .+ +.... ......+...+..+.+
T Consensus 175 ~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~-~~~~~-----------------~~~~~~~~~~~~~~~~ 235 (261)
T cd05034 175 AANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-VL-EQVER-----------------GYRMPRPPNCPEELYD 235 (261)
T ss_pred HhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HH-HHHHc-----------------CCCCCCCCCCCHHHHH
Confidence 9998889999999999999999999 888874322211 11 11100 0001112223456899
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
++.+||..+|++||+++++.+.|+.
T Consensus 236 ~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 236 LMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHcccCcccCCCHHHHHHHHhc
Confidence 9999999999999999999998875
No 155
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.3e-33 Score=320.23 Aligned_cols=248 Identities=22% Similarity=0.301 Sum_probs=193.1
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+|.. +++.||||+++. ++.+|++++++++||||+++++++.+++..++||||+++|+|.+++..
T Consensus 16 G~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s 95 (932)
T PRK13184 16 GEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKS 95 (932)
T ss_pred EEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHH
Confidence 89999987 688999999864 245799999999999999999999999999999999999999998853
Q ss_pred c---------CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCC----
Q 042486 430 K---------GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG---- 496 (635)
Q Consensus 430 ~---------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~---- 496 (635)
. ....+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 96 ~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~ 172 (932)
T PRK13184 96 VWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLD 172 (932)
T ss_pred hhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCcceecccccccccc
Confidence 1 112366778899999999999999985 499999999999999999999999999986521110
Q ss_pred -----------ceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccC
Q 042486 497 -----------EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE 565 (635)
Q Consensus 497 -----------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~ 565 (635)
.........||+.|+|||++.+..++.++|||||||++|||+||+.||............
T Consensus 173 l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~--------- 243 (932)
T PRK13184 173 IDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRD--------- 243 (932)
T ss_pred cccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhh---------
Confidence 001112356999999999999989999999999999999999999998542221111000
Q ss_pred CchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCC-CHHHHHHHHHHHHhhccccccc
Q 042486 566 DGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRP-AMDKIAQSISRFLNASLAWELS 629 (635)
Q Consensus 566 ~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~s~~w~~~ 629 (635)
...++... ......+..+.+++.+||+.||++|| +++++.+.|+.++.....|.+.
T Consensus 244 -------~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~ 300 (932)
T PRK13184 244 -------VILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVK 300 (932)
T ss_pred -------hccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccc
Confidence 00010000 00112345588999999999999995 6888999999999887777653
No 156
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.4e-33 Score=291.62 Aligned_cols=244 Identities=20% Similarity=0.318 Sum_probs=185.3
Q ss_pred ceEEEeee--CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+++. ++..+|+|.+..+ +.+|++++++++|+||+++++.+..++..++||||+++++|.+++...
T Consensus 15 g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~- 93 (308)
T cd06615 15 GVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA- 93 (308)
T ss_pred eEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc-
Confidence 89999987 6788999987532 557999999999999999999999999999999999999999999654
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
..+++..+..++.|++.||.|||+. .+++|+||||+||+++.++.+||+|||++...... ......++..|+
T Consensus 94 -~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~~~~~ 165 (308)
T cd06615 94 -GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYM 165 (308)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc-----ccccCCCCcCcc
Confidence 3389999999999999999999972 35999999999999999999999999998654322 123356889999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC--------------------chhhh
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED--------------------GEESL 571 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~--------------------~~~~l 571 (635)
|||.+.+..++.++||||||+++|+|++|+.|+...+.. .............. ..+..
T Consensus 166 aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (308)
T cd06615 166 SPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELL 243 (308)
T ss_pred ChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHH
Confidence 999998888999999999999999999999997543321 11111111000000 00001
Q ss_pred hhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 572 RHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 572 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
................+..+.+++.+||..||++||+++|++++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 244 DYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred HHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 111110000000112445689999999999999999999999883
No 157
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.1e-33 Score=287.67 Aligned_cols=238 Identities=24% Similarity=0.393 Sum_probs=186.3
Q ss_pred ceEEEeeeC------CcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEec-CCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIG------GDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFN-GGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~------~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|... +..|++|+++.. +.+|+.++++++|+||+++++++.. +...++++||+++++|.++
T Consensus 20 g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 99 (280)
T cd05043 20 GRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLF 99 (280)
T ss_pred ceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHH
Confidence 899999973 578999988653 4578999999999999999999876 4678999999999999999
Q ss_pred hcccCC------CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceee
Q 042486 427 INDKGG------KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500 (635)
Q Consensus 427 l~~~~~------~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 500 (635)
+..... ..+++..++.++.|++.||.|||+. +++||||||+||++++++.+||+|||+++........ ..
T Consensus 100 l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~-~~ 175 (280)
T cd05043 100 LQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH-CL 175 (280)
T ss_pred HHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCCCCcccccCCceE-Ee
Confidence 854321 4589999999999999999999985 4999999999999999999999999999755332211 11
Q ss_pred ecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcC
Q 042486 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSM 579 (635)
Q Consensus 501 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~ 579 (635)
.....++..|+|||++.+..++.++||||||+++||+++ |+.|+..... ..+....... .
T Consensus 176 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~-----------------~ 236 (280)
T cd05043 176 GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKDG-----------------Y 236 (280)
T ss_pred CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHcC-----------------C
Confidence 122345678999999988889999999999999999999 8888753221 1111111110 0
Q ss_pred CCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhh
Q 042486 580 QGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 580 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 622 (635)
....+...+..+.+++.+||..||++||++.|+++.|+.+...
T Consensus 237 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 237 RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 0011122345689999999999999999999999999988753
No 158
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.1e-34 Score=303.97 Aligned_cols=244 Identities=22% Similarity=0.271 Sum_probs=188.1
Q ss_pred HHHHhhcCCCCCCccc----ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCC
Q 042486 346 ELQAATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGG 409 (635)
Q Consensus 346 el~~at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 409 (635)
++....++|.....|| |.||+++. +++.+|+|.+.. .+.+|+.+++.++||||+++++++.+++
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 3344445666655665 89999987 678999998753 1447899999999999999999999999
Q ss_pred eeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 410 NWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 410 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
..|+||||+++|+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++.
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccce
Confidence 999999999999999999643 2788999999999999999999854 9999999999999999999999999997
Q ss_pred cccccCCceeeecccccCCCccCccccccC----CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccC
Q 042486 490 PAERQEGEFALTSHIVGTKGYMAPEYLENG----LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE 565 (635)
Q Consensus 490 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~ 565 (635)
....... .......||+.|+|||++... .++.++|||||||++|||++|+.||.......
T Consensus 191 ~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~-------------- 254 (370)
T cd05621 191 KMDETGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG-------------- 254 (370)
T ss_pred ecccCCc--eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH--------------
Confidence 6543221 122345799999999998653 37889999999999999999999986432211
Q ss_pred CchhhhhhhcCCcCCCCCC--hHHHHHHHHHHHHhhhcCCCC--CCCHHHHHHH
Q 042486 566 DGEESLRHLMDPSMQGNYP--PVTAILVIRLIESCLKKDPSG--RPAMDKIAQS 615 (635)
Q Consensus 566 ~~~~~l~~~~d~~~~~~~~--~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 615 (635)
....+++.......+ ...+..+.+++..|+..++.+ |+++.|+++|
T Consensus 255 ----~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 255 ----TYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ----HHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 111111111111111 123456789999999855543 8999999987
No 159
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-33 Score=292.67 Aligned_cols=238 Identities=28% Similarity=0.464 Sum_probs=184.7
Q ss_pred ceEEEeee---------CCcEEEEEEeccC--------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCc
Q 042486 362 GSVYRGKI---------GGDFVAIKKVYGD--------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~---------~~~~vavK~~~~~--------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 423 (635)
|.||+++. ....+|+|.++.. +.+|+++++++ +|+||+++++++.+++..+++|||+++|+|
T Consensus 26 g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 105 (314)
T cd05099 26 GQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNL 105 (314)
T ss_pred ccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcH
Confidence 89999874 2357999987642 45789999999 699999999999998899999999999999
Q ss_pred chhhcccC--------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 424 SVWINDKG--------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 424 ~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
.+++.... ...+++.++..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++
T Consensus 106 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~~~~~kL~Dfg~~~ 182 (314)
T cd05099 106 REFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVTEDNVMKIADFGLAR 182 (314)
T ss_pred HHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEcCCCcEEEccccccc
Confidence 99995422 234899999999999999999999854 9999999999999999999999999998
Q ss_pred cccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCch
Q 042486 490 PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGE 568 (635)
Q Consensus 490 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 568 (635)
........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||....... ......
T Consensus 183 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~~~~~~--------- 250 (314)
T cd05099 183 GVHDIDYY-KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE--LFKLLR--------- 250 (314)
T ss_pred cccccccc-cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHH---------
Confidence 65432211 11112234467999999988889999999999999999999 777764322111 111110
Q ss_pred hhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhh
Q 042486 569 ESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 569 ~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 622 (635)
.. .....+...+..+.+++.+||..||++||++.|+++.|.++...
T Consensus 251 -------~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 251 -------EG-HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred -------cC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 00 01112233345688999999999999999999999999998753
No 160
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.2e-33 Score=284.28 Aligned_cols=238 Identities=26% Similarity=0.390 Sum_probs=180.2
Q ss_pred ceEEEeee-----CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEe-cCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI-----GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICF-NGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~-----~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|+. ....||+|++.. .+.+|+.++++++|+||+++++++. .++..+++|||+.+|+|.+++
T Consensus 9 g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 88 (262)
T cd05058 9 GCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFI 88 (262)
T ss_pred ceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHH
Confidence 89999986 235799998743 2446888999999999999999876 455679999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc-eeeeccccc
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE-FALTSHIVG 506 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~g 506 (635)
..... .+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++........ ........+
T Consensus 89 ~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 164 (262)
T cd05058 89 RSETH-NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKL 164 (262)
T ss_pred HhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcC
Confidence 65432 368888899999999999999985 4999999999999999999999999998754322110 011122345
Q ss_pred CCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 507 t~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
+..|+|||.+.+..++.++||||||+++|||++|+.|+....... ...... .... ....+..
T Consensus 165 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~-~~~~~~----------------~~~~-~~~~~~~ 226 (262)
T cd05058 165 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF-DITVYL----------------LQGR-RLLQPEY 226 (262)
T ss_pred CccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH----------------hcCC-CCCCCCc
Confidence 678999999988889999999999999999999765543221111 111111 0000 0011122
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 621 (635)
.+..+.+++.+||+.+|++||++.|+++.|++++.
T Consensus 227 ~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 227 CPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 34468899999999999999999999999998874
No 161
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.4e-33 Score=287.11 Aligned_cols=235 Identities=24% Similarity=0.450 Sum_probs=183.5
Q ss_pred ceEEEeee--CC---cEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GG---DFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~---~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. ++ ..||||.++. ++..|+.++++++||||+++++++.+++..++||||+++++|.+++.
T Consensus 18 g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 97 (269)
T cd05065 18 GEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLR 97 (269)
T ss_pred CeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHh
Confidence 89999987 23 3699999864 34568999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc--c
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV--G 506 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~--g 506 (635)
.... .+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++................. .
T Consensus 98 ~~~~-~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 173 (269)
T cd05065 98 QNDG-QFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKI 173 (269)
T ss_pred hCCC-CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCc
Confidence 5433 4899999999999999999999854 99999999999999999999999999876543322111111111 2
Q ss_pred CCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 507 t~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
+..|+|||++.+..++.++||||||+++|||++ |..||....... ....+... .....+.
T Consensus 174 ~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~--~~~~i~~~-----------------~~~~~~~ 234 (269)
T cd05065 174 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--VINAIEQD-----------------YRLPPPM 234 (269)
T ss_pred ceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH--HHHHHHcC-----------------CcCCCcc
Confidence 357999999998889999999999999999887 888875322211 11111100 0011122
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
+.+..+.+++.+||+.+|.+||++++++..|+++
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 235 DCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 3345688999999999999999999999998875
No 162
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.9e-33 Score=284.94 Aligned_cols=235 Identities=23% Similarity=0.369 Sum_probs=182.0
Q ss_pred ceEEEeeeC-----CcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCe------eEEEeecccCC
Q 042486 362 GSVYRGKIG-----GDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGN------WYLVYENAVNG 421 (635)
Q Consensus 362 g~Vy~g~~~-----~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~------~~lV~E~~~~g 421 (635)
|.||+|+.. +..||+|+++.+ +.+|++.+++++|+||+++++++...+. .++++||+++|
T Consensus 13 g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~ 92 (273)
T cd05035 13 GSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHG 92 (273)
T ss_pred ceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCC
Confidence 899999872 267999988642 4568999999999999999999876544 79999999999
Q ss_pred Ccchhhccc----CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc
Q 042486 422 SLSVWINDK----GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE 497 (635)
Q Consensus 422 sL~~~l~~~----~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 497 (635)
+|..++... ....+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++........
T Consensus 93 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 169 (273)
T cd05035 93 DLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYY 169 (273)
T ss_pred CHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCccceeeccccccc
Confidence 999988432 223589999999999999999999985 4999999999999999999999999998865432211
Q ss_pred eeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcC
Q 042486 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD 576 (635)
Q Consensus 498 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d 576 (635)
.......++..|+|||.+.+..++.++||||||+++|||++ |..|+...... ...+.. .+
T Consensus 170 -~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~----------------~~ 230 (273)
T cd05035 170 -RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYL----------------RH 230 (273)
T ss_pred -cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH----------------Hc
Confidence 11112234678999999988889999999999999999999 77776432211 111111 11
Q ss_pred CcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 577 PSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 577 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
.. ....+...+..+.+++.+||+.||++||++.|+++.|+++
T Consensus 231 ~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GN-RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC-CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 10 1112233455689999999999999999999999999876
No 163
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2e-33 Score=294.73 Aligned_cols=251 Identities=18% Similarity=0.268 Sum_probs=182.5
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|+||++.. +++.||+|++..+ +.+|+++++.++||||+++++++..++..++||||+++|+|.+++...
T Consensus 14 ~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~ 93 (327)
T cd08227 14 MTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTH 93 (327)
T ss_pred EEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhh
Confidence 68999987 7899999998643 346899999999999999999999999999999999999999999654
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCce----eeeccccc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF----ALTSHIVG 506 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~g 506 (635)
....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++||+............ .......+
T Consensus 94 ~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (327)
T cd08227 94 FMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVK 170 (327)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccc
Confidence 4445899999999999999999999855 9999999999999999999999998654332111100 01122356
Q ss_pred CCCccCcccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC----chhhhh-----hhc
Q 042486 507 TKGYMAPEYLEN--GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED----GEESLR-----HLM 575 (635)
Q Consensus 507 t~~y~aPE~~~~--~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~----~~~~l~-----~~~ 575 (635)
+..|+|||++.+ ..++.++|||||||++|||++|+.||.....................+ ..+.+. ...
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (327)
T cd08227 171 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGA 250 (327)
T ss_pred eecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCC
Confidence 778999999875 458899999999999999999999986433222111111000000000 000000 000
Q ss_pred CC-----------------cCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 576 DP-----------------SMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 576 d~-----------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+. ..........+..+.+++.+||+.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 251 NSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 00 00001122345578999999999999999999999875
No 164
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=9.5e-34 Score=296.81 Aligned_cols=226 Identities=26% Similarity=0.363 Sum_probs=178.4
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccC-CcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHS-SLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~-nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. +++.||||.++.+ +..|.+++..++|+ +|+++++++.+.+..|+||||+++|+|.+++.
T Consensus 14 g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~ 93 (324)
T cd05587 14 GKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ 93 (324)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHH
Confidence 89999988 5679999988642 34577888888765 58889999999999999999999999999986
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........ ......||+
T Consensus 94 ~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~gt~ 165 (324)
T cd05587 94 QVG--KFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK---TTRTFCGTP 165 (324)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC---ceeeecCCc
Confidence 543 3899999999999999999999854 99999999999999999999999999864322111 123356899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.... ..++...+
T Consensus 166 ~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~------------------~~~~i~~~~--~~~~~~~~ 225 (324)
T cd05587 166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE------------------LFQSIMEHN--VSYPKSLS 225 (324)
T ss_pred cccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH------------------HHHHHHcCC--CCCCCCCC
Confidence 9999999999889999999999999999999999986433221 111111111 12233345
Q ss_pred HHHHHHHHHhhhcCCCCCCCH-----HHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAM-----DKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~-----~evl~~ 615 (635)
..+.+++.+||..||.+|++. ++++++
T Consensus 226 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 226 KEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 568899999999999999986 566554
No 165
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.4e-33 Score=286.63 Aligned_cols=232 Identities=23% Similarity=0.360 Sum_probs=180.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC-------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD-------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~-------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||+|+. +++.||+|++... +.+|+.++++++|+||+++++++..++..++||||+++++|.+++....
T Consensus 23 g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~- 101 (267)
T cd06646 23 GDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTG- 101 (267)
T ss_pred eEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-
Confidence 89999987 6789999988532 4579999999999999999999999999999999999999999986543
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
.+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++........ ......++..|+|
T Consensus 102 -~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~~ 174 (267)
T cd06646 102 -PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA---KRKSFIGTPYWMA 174 (267)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc---ccCccccCccccC
Confidence 389999999999999999999985 499999999999999999999999999875532211 1123468889999
Q ss_pred ccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 513 PEYLE---NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 513 PE~~~---~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
||.+. ...++.++||||||+++|||++|+.|+......... ... .. ..+..+... .....+.
T Consensus 175 PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-~~~-----~~-------~~~~~~~~~--~~~~~~~ 239 (267)
T cd06646 175 PEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLM-----SK-------SNFQPPKLK--DKTKWSS 239 (267)
T ss_pred HhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-eee-----ec-------CCCCCCCCc--cccccCH
Confidence 99874 345788999999999999999999987432211100 000 00 000001110 0112345
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
.+.+++.+||..||++||++++++++|
T Consensus 240 ~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 240 TFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 689999999999999999999999864
No 166
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2e-33 Score=289.29 Aligned_cols=248 Identities=25% Similarity=0.384 Sum_probs=187.5
Q ss_pred CCCCCCccc----ceEEEeeeC-------CcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEE
Q 042486 353 DFNPSCWIK----GSVYRGKIG-------GDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYL 413 (635)
Q Consensus 353 ~f~~~~~ig----g~Vy~g~~~-------~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 413 (635)
+|.....+| |.||+|... +..||+|.+... +.+|+.++++++|+||+++++++.+.+..++
T Consensus 7 ~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (288)
T cd05061 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV 86 (288)
T ss_pred HceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence 344444444 899998642 447999987532 4468889999999999999999998889999
Q ss_pred EeecccCCCcchhhcccC--------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeee
Q 042486 414 VYENAVNGSLSVWINDKG--------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485 (635)
Q Consensus 414 V~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 485 (635)
||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+||
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~Df 163 (288)
T cd05061 87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDF 163 (288)
T ss_pred EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEECcC
Confidence 999999999999995421 12356788899999999999999984 4999999999999999999999999
Q ss_pred cCcccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhccccc
Q 042486 486 ALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHK 564 (635)
Q Consensus 486 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 564 (635)
|+++........ .......++..|+|||.+.++.++.++|||||||++|||++ |..|+.....++ ..
T Consensus 164 g~~~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~--~~--------- 231 (288)
T cd05061 164 GMTRDIYETDYY-RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ--VL--------- 231 (288)
T ss_pred Cccccccccccc-cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HH---------
Confidence 998754332211 11122345678999999998889999999999999999999 666664322111 11
Q ss_pred CCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 565 EDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 565 ~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
..+.+... ...+...+..+.+++.+||+.||++||++.++++.|++.+..+
T Consensus 232 -------~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~ 282 (288)
T cd05061 232 -------KFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 282 (288)
T ss_pred -------HHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCC
Confidence 11111110 0112223456999999999999999999999999999877554
No 167
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-33 Score=291.18 Aligned_cols=228 Identities=23% Similarity=0.378 Sum_probs=183.6
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||+|+. +++.||+|.+.. .+.+|+.++++++|+||+++++.+..+...++||||+++++|.+++...
T Consensus 34 ~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-- 111 (296)
T cd06654 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-- 111 (296)
T ss_pred eEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc--
Confidence 89999986 688999998854 2457899999999999999999999999999999999999999998543
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
.+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........ ......+++.|+|
T Consensus 112 -~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~a 184 (296)
T cd06654 112 -CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSTMVGTPYWMA 184 (296)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhcccccc---ccCcccCCccccC
Confidence 3789999999999999999999854 99999999999999999999999999875433221 1123468889999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
||.+.+..++.++|||||||++|+|++|+.||.......... ... ..+......+......+.
T Consensus 185 PE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~~~~l~ 247 (296)
T cd06654 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIA----------------TNGTPELQNPEKLSAIFR 247 (296)
T ss_pred HHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH-HHh----------------cCCCCCCCCccccCHHHH
Confidence 999998888999999999999999999999985433211110 000 000001112233445689
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHH
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+++.+||..||++||++.|++++
T Consensus 248 ~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 248 DFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHCcCCcccCcCHHHHhhC
Confidence 99999999999999999999985
No 168
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.1e-33 Score=296.52 Aligned_cols=239 Identities=26% Similarity=0.414 Sum_probs=182.5
Q ss_pred ceEEEeee-------CCcEEEEEEeccC--------hHHHHHHHhhh-ccCCcccEEEEEecC-CeeEEEeecccCCCcc
Q 042486 362 GSVYRGKI-------GGDFVAIKKVYGD--------ASDQIKLLNKI-NHSSLIRLLGICFNG-GNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~-------~~~~vavK~~~~~--------~~~E~~~l~~l-~h~nIv~l~~~~~~~-~~~~lV~E~~~~gsL~ 424 (635)
|.||+|.. +++.||||+++.+ +.+|+.+|.++ +|+||+++++++... ...+++|||+++|+|.
T Consensus 21 g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~ 100 (343)
T cd05103 21 GQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 100 (343)
T ss_pred ceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHH
Confidence 89999973 4678999998642 45799999999 789999999988754 4579999999999999
Q ss_pred hhhcccC-----------------------------------------------------------------CCCCCHHH
Q 042486 425 VWINDKG-----------------------------------------------------------------GKFLDWAQ 439 (635)
Q Consensus 425 ~~l~~~~-----------------------------------------------------------------~~~l~~~~ 439 (635)
+++.... ...+++..
T Consensus 101 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
T cd05103 101 NYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLED 180 (343)
T ss_pred HHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHH
Confidence 9885321 12368888
Q ss_pred HHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccccC
Q 042486 440 RIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENG 519 (635)
Q Consensus 440 ~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 519 (635)
+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++........ ........++..|+|||.+.+.
T Consensus 181 ~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~ 256 (343)
T cd05103 181 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGDARLPLKWMAPETIFDR 256 (343)
T ss_pred HHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcc-hhhcCCCCCCcceECcHHhcCC
Confidence 999999999999999985 499999999999999999999999999876432211 1111223456789999999888
Q ss_pred CCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHh
Q 042486 520 LVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESC 598 (635)
Q Consensus 520 ~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~c 598 (635)
.++.++||||||+++|||++ |..|+........ ..... ........+...+..+.+++.+|
T Consensus 257 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~c 318 (343)
T cd05103 257 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRL-----------------KEGTRMRAPDYTTPEMYQTMLDC 318 (343)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HHHHH-----------------hccCCCCCCCCCCHHHHHHHHHH
Confidence 89999999999999999997 7777643221111 11100 00000111222334589999999
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHhh
Q 042486 599 LKKDPSGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 599 l~~dP~~RPs~~evl~~L~~~~~~ 622 (635)
|+.||++||++.||+++|+.+++.
T Consensus 319 l~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 319 WHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred ccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999875
No 169
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.3e-34 Score=313.22 Aligned_cols=241 Identities=22% Similarity=0.283 Sum_probs=186.9
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCC-------
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGG------- 409 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~------- 409 (635)
++|.....|| |.||+++. +++.||||.+..+ +.+|+..+..++|+||+++++.+...+
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 4444444454 89999987 7899999988532 456888999999999999988775332
Q ss_pred -eeEEEeecccCCCcchhhccc--CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeec
Q 042486 410 -NWYLVYENAVNGSLSVWINDK--GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFA 486 (635)
Q Consensus 410 -~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 486 (635)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEecc
Confidence 368999999999999998542 234589999999999999999999984 49999999999999999999999999
Q ss_pred CcccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC
Q 042486 487 LARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED 566 (635)
Q Consensus 487 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 566 (635)
+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 189 ls~~~~~~~~~-~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~--------------- 252 (496)
T PTZ00283 189 FSKMYAATVSD-DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE--------------- 252 (496)
T ss_pred cCeeccccccc-cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH---------------
Confidence 98765432111 12234679999999999999899999999999999999999999985422111
Q ss_pred chhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 567 GEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 567 ~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+........ ...+...+..+.+++.+||+.||.+||++.+++++
T Consensus 253 ---~~~~~~~~~~-~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 253 ---VMHKTLAGRY-DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ---HHHHHhcCCC-CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111111111 11233445668999999999999999999999875
No 170
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=8.6e-34 Score=297.02 Aligned_cols=226 Identities=26% Similarity=0.375 Sum_probs=178.6
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +++.||||.++.+ ...|..++..+ +|++|+++++++.+.+..++||||+++|+|.+++.
T Consensus 14 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~ 93 (323)
T cd05616 14 GKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQ 93 (323)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHH
Confidence 89999987 5679999988643 23456666666 58899999999999999999999999999999986
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++...... .......||+
T Consensus 94 ~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~---~~~~~~~gt~ 165 (323)
T cd05616 94 QVG--RFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG---VTTKTFCGTP 165 (323)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCC---CccccCCCCh
Confidence 543 3899999999999999999999855 9999999999999999999999999987533211 1123457899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||...+... + ...+.... ..++...+
T Consensus 166 ~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~--~----------------~~~i~~~~--~~~p~~~s 225 (323)
T cd05616 166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--L----------------FQSIMEHN--VAYPKSMS 225 (323)
T ss_pred hhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH--H----------------HHHHHhCC--CCCCCcCC
Confidence 9999999999999999999999999999999999986433221 1 11111111 12233345
Q ss_pred HHHHHHHHHhhhcCCCCCCCH-----HHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAM-----DKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~-----~evl~~ 615 (635)
..+.+++.+||+.||.+|++. .++.++
T Consensus 226 ~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 226 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 568999999999999999985 555543
No 171
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.9e-34 Score=297.94 Aligned_cols=221 Identities=24% Similarity=0.340 Sum_probs=174.9
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHH-HHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQI-KLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~-~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +++.||+|.+... +.+|. .+++.++|+||+++++++.+.+..|+||||+++|+|..++.
T Consensus 9 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 88 (321)
T cd05603 9 GKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQ 88 (321)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHH
Confidence 89999988 6789999988532 22333 35778899999999999999999999999999999998886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... .......||+
T Consensus 89 ~~~--~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~ 160 (321)
T cd05603 89 RER--CFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE---ETTSTFCGTP 160 (321)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC---CccccccCCc
Confidence 543 3888899999999999999999854 9999999999999999999999999987532221 1223457899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||.+.+..++.++|||||||++|||++|+.||...+... .. ..+.... ...+....
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~----------------~~i~~~~--~~~~~~~~ 220 (321)
T cd05603 161 EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ--MY----------------DNILHKP--LQLPGGKT 220 (321)
T ss_pred ccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH--HH----------------HHHhcCC--CCCCCCCC
Confidence 9999999998889999999999999999999999985432211 11 1111111 11223344
Q ss_pred HHHHHHHHHhhhcCCCCCCCHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMD 610 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~ 610 (635)
..+.+++.+||+.||.+||++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 221 VAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHHHccCCHhhcCCCC
Confidence 5689999999999999999864
No 172
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2e-33 Score=283.59 Aligned_cols=229 Identities=24% Similarity=0.350 Sum_probs=184.4
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+++. ++..+|+|.++. ++.+|+.++++++|+||+++++.+.+++..+++|||+++++|.+++....
T Consensus 14 g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~ 93 (255)
T cd08219 14 GRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQR 93 (255)
T ss_pred eEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhcc
Confidence 78999987 688999998742 24578899999999999999999999999999999999999999986555
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
...+++...+.++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||.+....... .......++..|+
T Consensus 94 ~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~ 167 (255)
T cd08219 94 GKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---AYACTYVGTPYYV 167 (255)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc---cccccccCCcccc
Confidence 555899999999999999999999854 9999999999999999999999999987554321 1122356888999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHH
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l 591 (635)
|||++.+..++.++|+||||+++|+|++|+.||...+.... ... +.... ....+...+..+
T Consensus 168 aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~-----------------~~~~~-~~~~~~~~~~~~ 228 (255)
T cd08219 168 PPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL-ILK-----------------VCQGS-YKPLPSHYSYEL 228 (255)
T ss_pred CHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH-HHH-----------------HhcCC-CCCCCcccCHHH
Confidence 99999988899999999999999999999999864322111 000 00000 011122344568
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+++.+||+.||++||++.|++..
T Consensus 229 ~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 229 RSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHhCCcccCCCHHHHhhc
Confidence 899999999999999999999864
No 173
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.2e-33 Score=288.71 Aligned_cols=233 Identities=26% Similarity=0.439 Sum_probs=183.2
Q ss_pred ceEEEeeeC-------CcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIG-------GDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~-------~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|... +..||+|.+... +.+|+.++++++|+||+++++++...+..++||||+++|+|.++
T Consensus 20 g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 99 (277)
T cd05032 20 GMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSY 99 (277)
T ss_pred ceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHH
Confidence 899999873 267999998643 45789999999999999999999999999999999999999999
Q ss_pred hcccC--------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCce
Q 042486 427 INDKG--------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF 498 (635)
Q Consensus 427 l~~~~--------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 498 (635)
+.... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++....... .
T Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~-~ 175 (277)
T cd05032 100 LRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDY-Y 175 (277)
T ss_pred HHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECCcccchhhccCcc-c
Confidence 85422 22478899999999999999999984 499999999999999999999999999875543221 1
Q ss_pred eeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCC
Q 042486 499 ALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDP 577 (635)
Q Consensus 499 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~ 577 (635)
.......++..|+|||.+.++.++.++||||||+++|||++ |+.|+....... ..... .+.
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~----------------~~~ 237 (277)
T cd05032 176 RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--VLKFV----------------IDG 237 (277)
T ss_pred ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--HHHHH----------------hcC
Confidence 11223456788999999988889999999999999999998 777764322211 11111 111
Q ss_pred cCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 578 SMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 578 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
. ....+...+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 238 ~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 238 G-HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred C-CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 0 11122333566899999999999999999999999875
No 174
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.2e-33 Score=287.68 Aligned_cols=233 Identities=23% Similarity=0.451 Sum_probs=182.0
Q ss_pred ceEEEeee-------CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI-------GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~-------~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||++.. ++..+|+|.+.. ++.+|++++++++|+||+++++++.+.+..+++|||+++++|.+++
T Consensus 19 g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i 98 (280)
T cd05092 19 GKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFL 98 (280)
T ss_pred CeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHH
Confidence 89999864 355789998764 4668999999999999999999999999999999999999999998
Q ss_pred cccCC-------------CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 428 NDKGG-------------KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 428 ~~~~~-------------~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
..... ..+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++......
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~ 175 (280)
T cd05092 99 RSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 175 (280)
T ss_pred HhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCEEECCCCceeEcCCC
Confidence 54321 24889999999999999999999854 999999999999999999999999998754322
Q ss_pred CCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhh
Q 042486 495 EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573 (635)
Q Consensus 495 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 573 (635)
.. ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||........ .. .
T Consensus 176 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~----------------~ 236 (280)
T cd05092 176 DY-YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA--IE----------------C 236 (280)
T ss_pred ce-eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH--HH----------------H
Confidence 11 111122345678999999998889999999999999999998 7877643222111 00 0
Q ss_pred hcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 574 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.... .....+...+..+.+++.+||+.||.+||+++||++.|+
T Consensus 237 ~~~~-~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 237 ITQG-RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHcC-ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1000 001112223455899999999999999999999999886
No 175
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.8e-33 Score=285.24 Aligned_cols=233 Identities=30% Similarity=0.467 Sum_probs=181.3
Q ss_pred ceEEEeee--CCc--EEEEEEecc--------ChHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGD--FVAIKKVYG--------DASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~--~vavK~~~~--------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|++ ++. .+++|.++. .+.+|+++++++ +||||+++++++...+..++||||+++|+|.+++.
T Consensus 9 g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 88 (270)
T cd05047 9 GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR 88 (270)
T ss_pred ceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHH
Confidence 89999987 333 578888763 244699999999 89999999999999999999999999999999985
Q ss_pred ccC--------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 429 DKG--------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 429 ~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~ 165 (270)
T cd05047 89 KSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVY 165 (270)
T ss_pred hccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCCCccccchh
Confidence 432 12478999999999999999999984 5999999999999999999999999998632211
Q ss_pred CCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhh
Q 042486 495 EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573 (635)
Q Consensus 495 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 573 (635)
. .......+..|+|||++....++.++||||||+++|||++ |+.||....... ......
T Consensus 166 ~----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~-------------- 225 (270)
T cd05047 166 V----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEKLP-------------- 225 (270)
T ss_pred h----hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH--HHHHHh--------------
Confidence 1 1111233567999999988889999999999999999997 888874322111 111110
Q ss_pred hcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 574 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
.......+...+..+.+++.+||+.||.+||++.|++..|.+++
T Consensus 226 ---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 226 ---QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ---CCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 00011112223445889999999999999999999999999876
No 176
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=7.4e-34 Score=297.78 Aligned_cols=224 Identities=24% Similarity=0.345 Sum_probs=176.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHH-HHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQI-KLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~-~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +++.||+|.+... +..|. .+++.++|+||+++++++..++..|+||||+++|+|.+++.
T Consensus 9 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 88 (325)
T cd05602 9 GKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQ 88 (325)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHH
Confidence 89999987 6778999998542 11222 34677899999999999999999999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++....... ......||+
T Consensus 89 ~~~--~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~---~~~~~~gt~ 160 (325)
T cd05602 89 RER--CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG---TTSTFCGTP 160 (325)
T ss_pred hcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCCC---CcccccCCc
Confidence 543 3788888899999999999999855 99999999999999999999999999875322211 123457999
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||....... ... .+..... ..++..+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~----------------~i~~~~~--~~~~~~~ 220 (325)
T cd05602 161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE--MYD----------------NILNKPL--QLKPNIT 220 (325)
T ss_pred cccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH--HHH----------------HHHhCCc--CCCCCCC
Confidence 9999999999899999999999999999999999986432221 111 1111100 1122334
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIA 613 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl 613 (635)
..+.+++.+||+.||.+||++.+.+
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 221 NSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred HHHHHHHHHHcccCHHHCCCCCCCH
Confidence 5589999999999999999987543
No 177
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.9e-33 Score=283.53 Aligned_cols=230 Identities=22% Similarity=0.313 Sum_probs=178.7
Q ss_pred ceEEEeee--CCcEEEEEEecc------------ChHHHHHHHhhhccCCcccEEEEEec--CCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG------------DASDQIKLLNKINHSSLIRLLGICFN--GGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~------------~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~E~~~~gsL~~ 425 (635)
|.||++.. ++..||+|++.. .+.+|+.++++++|+||+++++++.+ ++..++++||+++++|.+
T Consensus 16 g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~ 95 (266)
T cd06651 16 GRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKD 95 (266)
T ss_pred EEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHH
Confidence 89999986 688999998742 24568999999999999999999875 356799999999999999
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++.... .+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||+++................
T Consensus 96 ~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 170 (266)
T cd06651 96 QLKAYG--ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVT 170 (266)
T ss_pred HHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCC
Confidence 996543 3899999999999999999999854 99999999999999999999999999875432211111122345
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
++..|+|||.+.+..++.++||||||+++|||++|+.||....... ..............+.
T Consensus 171 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~------------------~~~~~~~~~~~~~~~~ 232 (266)
T cd06651 171 GTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA------------------AIFKIATQPTNPQLPS 232 (266)
T ss_pred ccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH------------------HHHHHhcCCCCCCCch
Confidence 7889999999998889999999999999999999999975322111 0111111111122233
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.....+.+++ +||..+|++||+++||+++
T Consensus 233 ~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 233 HISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred hcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 4445577777 7888999999999999864
No 178
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.1e-33 Score=303.29 Aligned_cols=232 Identities=21% Similarity=0.283 Sum_probs=177.9
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.+|+|.+.. .+.+|++++++++|+||+++++.+.+++..|+||||+++|+|.+++.+
T Consensus 15 g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 94 (382)
T cd05625 15 GEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR 94 (382)
T ss_pred EEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence 89999987 678999999854 245799999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCC-------------
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG------------- 496 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------- 496 (635)
.. .+++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 95 ~~--~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~ 169 (382)
T cd05625 95 MG--IFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQD 169 (382)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccc
Confidence 43 3888999999999999999999855 99999999999999999999999999753211000
Q ss_pred -------------------------------ceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCC
Q 042486 497 -------------------------------EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPA 545 (635)
Q Consensus 497 -------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~ 545 (635)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~ 249 (382)
T cd05625 170 SMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFL 249 (382)
T ss_pred cccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCC
Confidence 0001123468999999999998889999999999999999999999986
Q ss_pred CCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCC---HHHHHHH
Q 042486 546 LYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA---MDKIAQS 615 (635)
Q Consensus 546 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 615 (635)
........ ...... ............+....+++.+|+ .+|++|++ ++|+++|
T Consensus 250 ~~~~~~~~-~~i~~~---------------~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 250 AQTPLETQ-MKVINW---------------QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred CCCHHHHH-HHHHcc---------------CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 43322111 111000 000000111123345678887775 59999987 8888765
No 179
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.5e-33 Score=295.62 Aligned_cols=233 Identities=22% Similarity=0.349 Sum_probs=181.2
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +++.+|+|.++.+ +.+|..++.++ +|+||+++++++.+.+..|+||||+++|+|.+++.
T Consensus 9 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 88 (327)
T cd05617 9 AKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQ 88 (327)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHH
Confidence 89999987 6789999998743 34677888888 69999999999999999999999999999998886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.||+.||+|||+.+ ++||||||+||+++.++.+||+|||+++...... .......||+
T Consensus 89 ~~~--~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~ 160 (327)
T cd05617 89 RQR--KLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG---DTTSTFCGTP 160 (327)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC---CceecccCCc
Confidence 543 3899999999999999999999854 9999999999999999999999999987432211 1123457899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||......... .........+.... ...|...+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~p~~~~ 227 (327)
T cd05617 161 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM-----------NTEDYLFQVILEKP--IRIPRFLS 227 (327)
T ss_pred ccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccc-----------ccHHHHHHHHHhCC--CCCCCCCC
Confidence 999999999999999999999999999999999998542211100 00000111111111 12233345
Q ss_pred HHHHHHHHHhhhcCCCCCCCH------HHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAM------DKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~------~evl~~ 615 (635)
..+.+++.+||+.||++|+++ ++++++
T Consensus 228 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 228 VKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 568899999999999999985 466554
No 180
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.9e-33 Score=285.66 Aligned_cols=229 Identities=24% Similarity=0.357 Sum_probs=180.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|+. ++..||+|.+..+ +.+|++++++++|+||+++++++..++..++||||+++++|..+.
T Consensus 15 ~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~---- 90 (279)
T cd06619 15 GTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR---- 90 (279)
T ss_pred eEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh----
Confidence 89999987 7889999987532 457999999999999999999999999999999999999996652
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .....++..|+
T Consensus 91 --~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~y~ 160 (279)
T cd06619 91 --KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-----AKTYVGTNAYM 160 (279)
T ss_pred --cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-----ccCCCCChhhc
Confidence 2688889999999999999999855 9999999999999999999999999987543221 22357889999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHH
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l 591 (635)
|||++.+..++.++||||||+++|+|++|+.||.......... ........+.++..........+..+
T Consensus 161 aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (279)
T cd06619 161 APERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-----------MPLQLLQCIVDEDPPVLPVGQFSEKF 229 (279)
T ss_pred CceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-----------chHHHHHHHhccCCCCCCCCcCCHHH
Confidence 9999998889999999999999999999999985422111000 00011111111111111112234458
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+++.+||+.||++||+++|++++
T Consensus 230 ~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 230 VHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHHhhCChhhCCCHHHHhcC
Confidence 999999999999999999999886
No 181
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.7e-33 Score=290.47 Aligned_cols=182 Identities=26% Similarity=0.354 Sum_probs=148.4
Q ss_pred ceEEEeee----CCcEEEEEEecc-----ChHHHHHHHhhhccCCcccEEEEEec--CCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI----GGDFVAIKKVYG-----DASDQIKLLNKINHSSLIRLLGICFN--GGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~----~~~~vavK~~~~-----~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+|+. +++.+|+|.+.. ...+|+++|++++||||+++++++.. +...+++|||+. ++|.+++...
T Consensus 15 g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~ 93 (317)
T cd07868 15 GHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFH 93 (317)
T ss_pred eEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhc
Confidence 89999985 457899999864 35689999999999999999999864 456799999985 5887776421
Q ss_pred -------CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEE----CCCCcEEEeeecCcccccccCCcee
Q 042486 431 -------GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL----DTDFRAKIANFALARPAERQEGEFA 499 (635)
Q Consensus 431 -------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll----~~~~~~kl~Dfg~a~~~~~~~~~~~ 499 (635)
....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..........
T Consensus 94 ~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~ 170 (317)
T cd07868 94 RASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA 170 (317)
T ss_pred ccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcccc
Confidence 1234889999999999999999999855 9999999999999 4567899999999986543322222
Q ss_pred eecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 042486 500 LTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALY 547 (635)
Q Consensus 500 ~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~ 547 (635)
......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 171 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 171 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 2334578999999999876 45899999999999999999999998643
No 182
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3e-33 Score=287.53 Aligned_cols=244 Identities=25% Similarity=0.368 Sum_probs=179.0
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhh---ccCCcccEEEEEec-----CCeeEEEeecccCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKI---NHSSLIRLLGICFN-----GGNWYLVYENAVNGS 422 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l---~h~nIv~l~~~~~~-----~~~~~lV~E~~~~gs 422 (635)
|.||+++. +++.||+|.++. ...+|+++++++ +|+||+++++++.. ....+++|||+.+ +
T Consensus 14 g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~ 92 (288)
T cd07863 14 GTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-D 92 (288)
T ss_pred eEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEccccc-C
Confidence 89999987 688999998853 234677777766 69999999998864 2457999999974 8
Q ss_pred cchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeec
Q 042486 423 LSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502 (635)
Q Consensus 423 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 502 (635)
|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....... ..
T Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~----~~ 165 (288)
T cd07863 93 LRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMA----LT 165 (288)
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccccccCccc----CC
Confidence 988886654455899999999999999999999855 99999999999999999999999999976543211 12
Q ss_pred ccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchh---hh---hhhcC
Q 042486 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEE---SL---RHLMD 576 (635)
Q Consensus 503 ~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~---~l---~~~~d 576 (635)
...++..|+|||++.+..++.++|||||||++|||++|+.||....... .+...... ........ .. .....
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 243 (288)
T cd07863 166 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDL-IGLPPEDDWPRDVTLPRGAFS 243 (288)
T ss_pred CccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHH-hCCCChhhCcccccccccccC
Confidence 3467899999999998889999999999999999999998875433221 11111110 00000000 00 00000
Q ss_pred CcCC---CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 577 PSMQ---GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 577 ~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+... ....+..+..+.+++.+||+.||++|||+.|++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 244 PRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred CCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 01112334567899999999999999999999864
No 183
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.8e-33 Score=289.23 Aligned_cols=231 Identities=26% Similarity=0.327 Sum_probs=183.9
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||++.. +++.+|+|.+... +.+|+.++++++|++++++++.+.+++..++||||+++++|.+++..
T Consensus 14 g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~ 93 (285)
T cd05630 14 GEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH 93 (285)
T ss_pred eEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHH
Confidence 89999988 6889999987532 34689999999999999999999999999999999999999999865
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.....+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||++........ .....|+..
T Consensus 94 ~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~----~~~~~g~~~ 166 (285)
T cd05630 94 MGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT----IKGRVGTVG 166 (285)
T ss_pred hcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc----ccCCCCCcc
Confidence 4444589999999999999999999985 499999999999999999999999999875432211 123468999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||.+.+..++.++||||||+++|||++|+.||........ .+....+.+. .....+.....
T Consensus 167 y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~~~ 230 (285)
T cd05630 167 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK---------------REEVERLVKE-VQEEYSEKFSP 230 (285)
T ss_pred ccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch---------------HHHHHhhhhh-hhhhcCccCCH
Confidence 9999999988899999999999999999999999864322110 0000000000 00112223345
Q ss_pred HHHHHHHHhhhcCCCCCCC-----HHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPA-----MDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs-----~~evl~~ 615 (635)
.+.+|+.+||+.||++||| ++|++++
T Consensus 231 ~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 231 DARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred HHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 5899999999999999999 8888886
No 184
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=7.2e-34 Score=303.98 Aligned_cols=232 Identities=20% Similarity=0.273 Sum_probs=179.2
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||||.+.. .+.+|+++|++++|+||+++++.+.+++..|+||||+++|+|.+++..
T Consensus 15 g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~ 94 (376)
T cd05598 15 GEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR 94 (376)
T ss_pred eEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh
Confidence 89999987 688999998853 245799999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCC-------------
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG------------- 496 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------- 496 (635)
.. .+++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 95 ~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~ 169 (376)
T cd05598 95 LG--IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQD 169 (376)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccc
Confidence 43 3888999999999999999999855 99999999999999999999999999753210000
Q ss_pred ---------------------------ceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcc
Q 042486 497 ---------------------------EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSE 549 (635)
Q Consensus 497 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~ 549 (635)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~ 249 (376)
T cd05598 170 SMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTP 249 (376)
T ss_pred cccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCH
Confidence 00011234799999999999988899999999999999999999999865433
Q ss_pred hhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCC---CHHHHHHH
Q 042486 550 ENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRP---AMDKIAQS 615 (635)
Q Consensus 550 ~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~~ 615 (635)
..... ..... ............+..+.+++.+|+ .+|.+|+ ++.|++++
T Consensus 250 ~~~~~-~i~~~---------------~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 250 AETQL-KVINW---------------ETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred HHHHH-HHhcc---------------CccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 22110 00000 000000111123445778888876 5999999 89999877
No 185
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.7e-33 Score=289.13 Aligned_cols=253 Identities=23% Similarity=0.373 Sum_probs=192.3
Q ss_pred cccHHHHHHhhcCCCCCCccc----ceEEEeee--CCcEEEEEEecc------ChHHHHHHHhhh-ccCCcccEEEEEe-
Q 042486 341 VYTFEELQAATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG------DASDQIKLLNKI-NHSSLIRLLGICF- 406 (635)
Q Consensus 341 ~~~~~el~~at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~------~~~~E~~~l~~l-~h~nIv~l~~~~~- 406 (635)
.+.++++..++++|.....|| |.||+++. +++.+|+|.... ++.+|+.+++++ +|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 355667777777887777775 89999987 678999998753 355789999999 6999999999884
Q ss_pred ----cCCeeEEEeecccCCCcchhhcc--cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcE
Q 042486 407 ----NGGNWYLVYENAVNGSLSVWIND--KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA 480 (635)
Q Consensus 407 ----~~~~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 480 (635)
.++..++||||+++++|.+++.. .....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCE
Confidence 34568999999999999998743 22345889999999999999999999854 9999999999999999999
Q ss_pred EEeeecCcccccccCCceeeecccccCCCccCcccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHH
Q 042486 481 KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-----GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLV 555 (635)
Q Consensus 481 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~ 555 (635)
||+|||+++....... ......|+..|+|||++.. ..++.++|||||||++|||++|+.|+........ +.
T Consensus 164 kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-~~ 239 (286)
T cd06638 164 KLVDFGVSAQLTSTRL---RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-LF 239 (286)
T ss_pred EEccCCceeecccCCC---ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-Hh
Confidence 9999999875533211 1223468899999998853 4478899999999999999999998753322110 00
Q ss_pred HhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 556 DVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 556 ~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
.. .. ...+. ...+...+..+.+++.+||+.||++||++.|++++.
T Consensus 240 ~~----~~----------~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 240 KI----PR----------NPPPT--LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hc----cc----------cCCCc--ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00 00 00000 011122334589999999999999999999999864
No 186
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.2e-33 Score=281.81 Aligned_cols=230 Identities=27% Similarity=0.418 Sum_probs=185.0
Q ss_pred ceEEEeee--CCcEEEEEEecc-----ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-----DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-----~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||+|+. +++.+++|.+.. ++.+|++++++++|+||+++++++.++...|+++||+++++|.+++.... ..
T Consensus 17 ~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~-~~ 95 (256)
T cd06612 17 GSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITN-KT 95 (256)
T ss_pred eEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCc-cC
Confidence 89999998 478999998864 36689999999999999999999999999999999999999999986433 34
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........ ......++..|+|||
T Consensus 96 l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE 169 (256)
T cd06612 96 LTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA---KRNTVIGTPFWMAPE 169 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc---ccccccCCccccCHH
Confidence 899999999999999999999854 99999999999999999999999999886543321 122345788999999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRL 594 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~l 594 (635)
++.+..++.++||||||+++|+|++|+.|+........... . .....+ ....+......+.++
T Consensus 170 ~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~-~--------------~~~~~~--~~~~~~~~~~~~~~~ 232 (256)
T cd06612 170 VIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM-I--------------PNKPPP--TLSDPEKWSPEFNDF 232 (256)
T ss_pred HHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh-h--------------ccCCCC--CCCchhhcCHHHHHH
Confidence 99888899999999999999999999998764322111100 0 000000 011122344568999
Q ss_pred HHHhhhcCCCCCCCHHHHHHH
Q 042486 595 IESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 595 i~~cl~~dP~~RPs~~evl~~ 615 (635)
+.+||+.||++||++.|++++
T Consensus 233 i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 233 VKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred HHHHHhcChhhCcCHHHHhcC
Confidence 999999999999999999864
No 187
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3e-33 Score=287.77 Aligned_cols=243 Identities=25% Similarity=0.404 Sum_probs=185.8
Q ss_pred CCCCCCccc----ceEEEeee-------CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEE
Q 042486 353 DFNPSCWIK----GSVYRGKI-------GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYL 413 (635)
Q Consensus 353 ~f~~~~~ig----g~Vy~g~~-------~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 413 (635)
+|.....+| |.||+++. ++..||+|.+... +.+|+.++++++|+||+++++++.+++..++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (288)
T cd05050 6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCL 85 (288)
T ss_pred hceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEE
Confidence 444444444 89999986 3578999987542 5578999999999999999999999999999
Q ss_pred EeecccCCCcchhhcccC--------------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEE
Q 042486 414 VYENAVNGSLSVWINDKG--------------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVL 473 (635)
Q Consensus 414 V~E~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIl 473 (635)
+|||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +++||||||+||+
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~nil 162 (288)
T cd05050 86 LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCL 162 (288)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhheE
Confidence 999999999999985321 12478899999999999999999984 5999999999999
Q ss_pred ECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhh
Q 042486 474 LDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENM 552 (635)
Q Consensus 474 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~ 552 (635)
+++++.++|+|||++......... ........+..|+|||.+.+..++.++|||||||++|||++ |..|+......+
T Consensus 163 ~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~- 240 (288)
T cd05050 163 VGENMVVKIADFGLSRNIYSADYY-KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE- 240 (288)
T ss_pred ecCCCceEECccccceecccCccc-cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-
Confidence 999999999999998754322110 11112234567999999988889999999999999999998 777764322111
Q ss_pred HHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 553 LLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 553 ~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
....+.+... ...+...+..+.+++.+||+.||++||++.|+++.|++
T Consensus 241 -----------------~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 241 -----------------VIYYVRDGNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -----------------HHHHHhcCCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1111111111 11122344568999999999999999999999999863
No 188
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3e-33 Score=286.53 Aligned_cols=250 Identities=22% Similarity=0.390 Sum_probs=189.2
Q ss_pred ceEEEeeeC------CcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEec--CCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKIG------GDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFN--GGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~~------~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~E~~~~gsL~~ 425 (635)
|.||+++++ +..+|||.++. ++.+|++++++++|+||+++++++.. +...+++|||+++++|.+
T Consensus 18 ~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~ 97 (284)
T cd05038 18 GKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRD 97 (284)
T ss_pred eeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHH
Confidence 899999863 57899998853 25578999999999999999999887 557899999999999999
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++..... .+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.................
T Consensus 98 ~l~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 173 (284)
T cd05038 98 YLQRHRD-QINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGE 173 (284)
T ss_pred HHHhCcc-ccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCC
Confidence 9965443 3899999999999999999999854 99999999999999999999999999987653322212222234
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
++..|++||.+.+..++.++||||||++++||++|+.|+......... ..... ........+...+........+.
T Consensus 174 ~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 249 (284)
T cd05038 174 SPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGIA-QGQMIVTRLLELLKEGERLPRPP 249 (284)
T ss_pred CcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccccc-cccccHHHHHHHHHcCCcCCCCc
Confidence 556799999998888999999999999999999999886532221100 00000 00011111222222222222233
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
..+..+.+++.+||+.+|++||++.||++.|+++
T Consensus 250 ~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 250 SCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 4456799999999999999999999999999875
No 189
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2e-33 Score=294.20 Aligned_cols=220 Identities=25% Similarity=0.369 Sum_probs=175.3
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +++.||+|.+..+ +..|..++..+. |++|+++++++.+.+..|+||||+++|+|.+++.
T Consensus 14 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~ 93 (323)
T cd05615 14 GKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ 93 (323)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHH
Confidence 89999987 6889999988642 335777787775 5678889999999999999999999999999986
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++.++..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++...... .......||.
T Consensus 94 ~~~--~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~---~~~~~~~gt~ 165 (323)
T cd05615 94 QVG--KFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG---VTTRTFCGTP 165 (323)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCC---ccccCccCCc
Confidence 543 3899999999999999999999854 9999999999999999999999999987533221 1123456899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||....... ....++... ..++...+
T Consensus 166 ~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~------------------~~~~i~~~~--~~~p~~~~ 225 (323)
T cd05615 166 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE------------------LFQSIMEHN--VSYPKSLS 225 (323)
T ss_pred cccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH------------------HHHHHHhCC--CCCCccCC
Confidence 9999999998889999999999999999999999986433211 111111111 12233344
Q ss_pred HHHHHHHHHhhhcCCCCCCCH
Q 042486 589 ILVIRLIESCLKKDPSGRPAM 609 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~ 609 (635)
..+.+++.+||+.||.+|++.
T Consensus 226 ~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 226 KEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred HHHHHHHHHHcccCHhhCCCC
Confidence 568899999999999999985
No 190
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.1e-33 Score=286.43 Aligned_cols=240 Identities=24% Similarity=0.419 Sum_probs=182.8
Q ss_pred ceEEEeeeC------------------CcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEe
Q 042486 362 GSVYRGKIG------------------GDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVY 415 (635)
Q Consensus 362 g~Vy~g~~~------------------~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 415 (635)
|.||+++.. +..||+|.+..+ +.+|++++++++|+||+++++++..++..+++|
T Consensus 19 g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 98 (296)
T cd05051 19 GEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIM 98 (296)
T ss_pred ccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEE
Confidence 789988762 246899998643 446899999999999999999999999999999
Q ss_pred ecccCCCcchhhcccC---------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeec
Q 042486 416 ENAVNGSLSVWINDKG---------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFA 486 (635)
Q Consensus 416 E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 486 (635)
||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~Nili~~~~~~~l~dfg 175 (296)
T cd05051 99 EYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRNCLVGKNYTIKIADFG 175 (296)
T ss_pred ecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhceeecCCCceEEcccc
Confidence 9999999999985533 125899999999999999999999855 9999999999999999999999999
Q ss_pred CcccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh--CCCCCCCCcchhhHHHHhhhccccc
Q 042486 487 LARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS--GKEAPALYSEENMLLVDVLNPVLHK 564 (635)
Q Consensus 487 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt--G~~p~~~~~~~~~~l~~~~~~~~~~ 564 (635)
+++....... ........++..|+|||++.+..++.++||||||+++|||++ +..|+...... .........+..
T Consensus 176 ~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~--~~~~~~~~~~~~ 252 (296)
T cd05051 176 MSRNLYSSDY-YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ--QVIENAGHFFRD 252 (296)
T ss_pred ceeecccCcc-eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH--HHHHHHHhcccc
Confidence 9875433221 122234456788999999988889999999999999999998 55555432211 111111111111
Q ss_pred CCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 565 EDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 565 ~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.. .......+...+..+.+++.+||+.||++||++.||++.|+
T Consensus 253 ~~----------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 253 DG----------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred cc----------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 00 00001112233456999999999999999999999999885
No 191
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.6e-33 Score=281.74 Aligned_cols=230 Identities=27% Similarity=0.449 Sum_probs=182.5
Q ss_pred ceEEEeee-CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||++.+ +++.+|+|.++. ++.+|++++++++|+|++++++++......++||||+++++|.+++..... .
T Consensus 18 g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-~ 96 (256)
T cd05112 18 GLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRG-K 96 (256)
T ss_pred ceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCcc-C
Confidence 89999988 478899998864 366899999999999999999999999999999999999999999865433 3
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++....... .......++.+|+|||
T Consensus 97 ~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~aPe 171 (256)
T cd05112 97 FSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--TSSTGTKFPVKWSSPE 171 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcc--cccCCCccchhhcCHh
Confidence 889999999999999999999855 99999999999999999999999999875432211 1111233557899999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
.+.++.++.++||||||+++|||++ |+.|+....... ..+.... ......+...+..+.+
T Consensus 172 ~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~~ 232 (256)
T cd05112 172 VFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE--VVETINA-----------------GFRLYKPRLASQSVYE 232 (256)
T ss_pred HhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--HHHHHhC-----------------CCCCCCCCCCCHHHHH
Confidence 9998889999999999999999998 888775322211 1111100 0000111223456899
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L 616 (635)
|+.+||+.+|++||+++|++++|
T Consensus 233 l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 233 LMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHHcccChhhCCCHHHHHHhh
Confidence 99999999999999999999987
No 192
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=4.9e-33 Score=280.81 Aligned_cols=233 Identities=28% Similarity=0.508 Sum_probs=187.9
Q ss_pred ceEEEeeeC-----CcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKIG-----GDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~~-----~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||++... +..+++|.+... +.+|++.+++++|+||+++++++..++..++||||+++++|.+++.
T Consensus 9 g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 88 (262)
T cd00192 9 GEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLR 88 (262)
T ss_pred eEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHh
Confidence 899999984 779999998653 3468999999999999999999999899999999999999999996
Q ss_pred ccC-------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeee
Q 042486 429 DKG-------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALT 501 (635)
Q Consensus 429 ~~~-------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 501 (635)
... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||.+........ ....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 164 (262)
T cd00192 89 KSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY-YRKK 164 (262)
T ss_pred hccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccccccccc-cccc
Confidence 541 24589999999999999999999984 499999999999999999999999999987654321 1223
Q ss_pred cccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCC
Q 042486 502 SHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQ 580 (635)
Q Consensus 502 ~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~ 580 (635)
....++..|+|||.+....++.++||||||+++|||++ |..|+....... ..+. +.+ ...
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~----------------~~~-~~~ 225 (262)
T cd00192 165 TGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE--VLEY----------------LRK-GYR 225 (262)
T ss_pred cCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH--HHHH----------------HHc-CCC
Confidence 34567889999999988889999999999999999999 577775432211 1111 111 111
Q ss_pred CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 581 GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 581 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
...+...+..+.+++.+||+.||++||++.|++++|+
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1223334566899999999999999999999999873
No 193
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.5e-33 Score=288.71 Aligned_cols=232 Identities=24% Similarity=0.398 Sum_probs=185.4
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||+|.. +++.||+|.+.. .+.+|+.++++++|+||+++++++..++..++|+||+++++|.+++...
T Consensus 33 g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-- 110 (296)
T cd06655 33 GTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET-- 110 (296)
T ss_pred eEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc--
Confidence 89999986 788999998753 2457899999999999999999999999999999999999999998643
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
.+++.++..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++........ ......++..|+|
T Consensus 111 -~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~a 183 (296)
T cd06655 111 -CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS---KRSTMVGTPYWMA 183 (296)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc---cCCCcCCCccccC
Confidence 3899999999999999999999855 99999999999999999999999999875443221 1223468889999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
||.+.+..++.++|||||||++|+|++|+.||...+...... .... ........+...+..+.
T Consensus 184 PE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~ 246 (296)
T cd06655 184 PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIAT----------------NGTPELQNPEKLSPIFR 246 (296)
T ss_pred cchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHh----------------cCCcccCCcccCCHHHH
Confidence 999998889999999999999999999999986433221110 0000 00000111223345688
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQSISRFLN 621 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~L~~~~~ 621 (635)
+++.+||..||++||++.+++++ .++.
T Consensus 247 ~li~~~l~~dp~~Rpt~~~il~~--~~~~ 273 (296)
T cd06655 247 DFLNRCLEMDVEKRGSAKELLQH--PFLK 273 (296)
T ss_pred HHHHHHhhcChhhCCCHHHHhhC--hHhh
Confidence 99999999999999999999976 4444
No 194
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=5.4e-33 Score=281.49 Aligned_cols=232 Identities=22% Similarity=0.395 Sum_probs=183.7
Q ss_pred ceEEEeee-CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|.||++.. .+..+|+|.+.. .+.+|++++++++|+||+++++++.+ ...+++|||+++++|.+++.......
T Consensus 20 ~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~ 98 (260)
T cd05073 20 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSK 98 (260)
T ss_pred eEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccc
Confidence 89999987 556799998864 35579999999999999999999877 77899999999999999997655556
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||.+........ .......++..|+|||
T Consensus 99 ~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~y~~PE 173 (260)
T cd05073 99 QPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY--TAREGAKFPIKWTAPE 173 (260)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCc--ccccCCcccccccCHh
Confidence 899999999999999999999854 99999999999999999999999999875533211 1122234567799999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
++..+.++.++|+||||+++|++++ |+.|+...+... ....... ......+...+..+.+
T Consensus 174 ~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~~ 234 (260)
T cd05073 174 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALER-----------------GYRMPRPENCPEELYN 234 (260)
T ss_pred HhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHhC-----------------CCCCCCcccCCHHHHH
Confidence 9998889999999999999999999 887775322211 1111110 0001112233456899
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
++.+||+.+|++||++.++.+.|+.
T Consensus 235 ~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 235 IMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999999999875
No 195
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.6e-33 Score=287.41 Aligned_cols=246 Identities=25% Similarity=0.322 Sum_probs=180.6
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+|+. ++..||||+++. .+.+|+.++++++|+||+++++++.+++..++||||++ ++|.+++...
T Consensus 14 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~ 92 (285)
T cd07861 14 GVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSL 92 (285)
T ss_pred eEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcC
Confidence 89999987 688999998752 25679999999999999999999999999999999997 6888888543
Q ss_pred C-CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 431 G-GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 431 ~-~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++........ ......++..
T Consensus 93 ~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~ 166 (285)
T cd07861 93 PKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR---VYTHEVVTLW 166 (285)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc---cccCCccccc
Confidence 2 24589999999999999999999985 499999999999999999999999999875432211 1123356889
Q ss_pred ccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcc---c----ccCCchhhhhhhcCCcCC-
Q 042486 510 YMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPV---L----HKEDGEESLRHLMDPSMQ- 580 (635)
Q Consensus 510 y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~---~----~~~~~~~~l~~~~d~~~~- 580 (635)
|+|||.+.+ ..++.++||||||+++|||+||+.|+........ ........ . ..................
T Consensus 167 y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (285)
T cd07861 167 YRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ-LFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKG 245 (285)
T ss_pred ccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCChhhhhcchhhHHHHhhccccCcc
Confidence 999998865 4468899999999999999999988864332211 11111000 0 000000000000000000
Q ss_pred --CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 581 --GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 581 --~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.......+..+.+++.+||+.||++|||+++++++
T Consensus 246 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 246 SLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00111234567899999999999999999999865
No 196
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.5e-33 Score=291.54 Aligned_cols=244 Identities=23% Similarity=0.346 Sum_probs=180.8
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|+. +++.||+|.++. .+.+|++++++++|+||+++++++..++..++||||+++ +|.+++....
T Consensus 20 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~ 98 (309)
T cd07872 20 ATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCG 98 (309)
T ss_pred EEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcC
Confidence 89999987 678999998853 245799999999999999999999999999999999975 8888875443
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....... ......++..|+
T Consensus 99 -~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~ 171 (309)
T cd07872 99 -NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK---TYSNEVVTLWYR 171 (309)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc---cccccccccccc
Confidence 3488999999999999999999985 499999999999999999999999999875432221 112346788999
Q ss_pred Ccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc--------hhhhhhhcCCcCCC-
Q 042486 512 APEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG--------EESLRHLMDPSMQG- 581 (635)
Q Consensus 512 aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--------~~~l~~~~d~~~~~- 581 (635)
|||.+.+ ..++.++||||||+++|||++|+.||...+..+. +... ...+..... .......-.+....
T Consensus 172 aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (309)
T cd07872 172 PPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLI-FRLLGTPTEETWPGISSNDEFKNYNFPKYKPQ 249 (309)
T ss_pred CCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHH-HHHhCCCCHHHHhhhcchhhhhhhhcCccCCC
Confidence 9998865 5688999999999999999999999865433211 1111 011100000 00000000010000
Q ss_pred ---CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 582 ---NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 582 ---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
......+..+.+++.+||+.||.+|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 250 PLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred chhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0011234557899999999999999999999985
No 197
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.3e-33 Score=287.08 Aligned_cols=240 Identities=25% Similarity=0.449 Sum_probs=180.2
Q ss_pred ceEEEeeeC----------------CcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeec
Q 042486 362 GSVYRGKIG----------------GDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417 (635)
Q Consensus 362 g~Vy~g~~~----------------~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 417 (635)
|.||+++.. ...||+|.++.+ +.+|++++++++|+|++++++++..++..++||||
T Consensus 19 g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 98 (295)
T cd05097 19 GEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEY 98 (295)
T ss_pred ceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEec
Confidence 789988652 125899988653 45799999999999999999999999999999999
Q ss_pred ccCCCcchhhcccC----------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecC
Q 042486 418 AVNGSLSVWINDKG----------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFAL 487 (635)
Q Consensus 418 ~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 487 (635)
+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+
T Consensus 99 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nill~~~~~~kl~dfg~ 175 (295)
T cd05097 99 MENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCLVGNHYTIKIADFGM 175 (295)
T ss_pred CCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEEEcCCCcEEeccccc
Confidence 99999999985421 123788999999999999999999855 99999999999999999999999999
Q ss_pred cccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhC--CCCCCCCcchhhHHHHhhhcccccC
Q 042486 488 ARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG--KEAPALYSEENMLLVDVLNPVLHKE 565 (635)
Q Consensus 488 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG--~~p~~~~~~~~~~l~~~~~~~~~~~ 565 (635)
+........ ........++..|+|||.+.++.++.++||||||+++|||+++ ..|+....... ........+...
T Consensus 176 ~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~--~~~~~~~~~~~~ 252 (295)
T cd05097 176 SRNLYSGDY-YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ--VIENTGEFFRNQ 252 (295)
T ss_pred ccccccCcc-eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH--HHHHHHHhhhhc
Confidence 875433221 1122233456789999999888899999999999999999984 44554322211 111111100000
Q ss_pred CchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 566 DGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 566 ~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
........+...+..+.+|+.+||+.||++||++++|++.|+
T Consensus 253 ----------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 253 ----------GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ----------cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 000001112223456999999999999999999999999886
No 198
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.3e-33 Score=282.84 Aligned_cols=232 Identities=26% Similarity=0.406 Sum_probs=183.2
Q ss_pred ceEEEeee-CCcEEEEEEecc-------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG-------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~-------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|+. +++.+|+|.++. .+.+|++++++++|+||+++++++.+.+..++++||+++++|.+++
T Consensus 14 ~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 93 (265)
T cd06631 14 GTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSIL 93 (265)
T ss_pred eEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHH
Confidence 89999987 788999998752 2457999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCC---ceeeeccc
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG---EFALTSHI 504 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~ 504 (635)
.+.. .+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........ ........
T Consensus 94 ~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 168 (265)
T cd06631 94 NRFG--PLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSM 168 (265)
T ss_pred HhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccccccccccc
Confidence 6543 3789999999999999999999854 99999999999999999999999999875432111 01112335
Q ss_pred ccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
.++..|+|||++.+..++.++||||||+++|+|++|+.||...+...... ..... ....+ ..+
T Consensus 169 ~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~-~~~~~------------~~~~~----~~~ 231 (265)
T cd06631 169 HGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF-YIGAH------------RGLMP----RLP 231 (265)
T ss_pred CCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH-Hhhhc------------cCCCC----CCC
Confidence 68899999999998889999999999999999999999985432211100 00000 00011 122
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 585 PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 585 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+..+.+++.+||+.+|.+||++.|++++
T Consensus 232 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 232 DSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 2344568999999999999999999999863
No 199
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-33 Score=280.00 Aligned_cols=253 Identities=25% Similarity=0.420 Sum_probs=184.2
Q ss_pred ceEEEeeeCCcEEEEEEeccC----hHHHHHHHhh--hccCCcccEEEEEecCC----eeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKIGGDFVAIKKVYGD----ASDQIKLLNK--INHSSLIRLLGICFNGG----NWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~~----~~~E~~~l~~--l~h~nIv~l~~~~~~~~----~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|+|.|..||||.+... ..+|.++.+. |+|+||+.+++.-..++ +++||.+|.+.|||.|||.+..
T Consensus 225 GEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t 304 (513)
T KOG2052|consen 225 GEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT 304 (513)
T ss_pred cceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhcc
Confidence 899999999999999999643 4467777665 59999999998765332 4799999999999999997743
Q ss_pred CCCCCHHHHHHHHHHHHhhhccccc-----CCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc-eeeecccc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHS-----FTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE-FALTSHIV 505 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~-----~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~ 505 (635)
++....++++..+|.||+|||. .+.+.|.|||||+.|||+..++...|+|+|+|......... ....+..+
T Consensus 305 ---v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rV 381 (513)
T KOG2052|consen 305 ---VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRV 381 (513)
T ss_pred ---CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCcc
Confidence 8999999999999999999995 45678999999999999999999999999999866544222 22235578
Q ss_pred cCCCccCccccccCC------CCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhh-cCCc
Q 042486 506 GTKGYMAPEYLENGL------VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL-MDPS 578 (635)
Q Consensus 506 gt~~y~aPE~~~~~~------~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~-~d~~ 578 (635)
||.+|||||++.... .-..+||||||.++||+.-...--...++-...+.++ .......+..++. ...+
T Consensus 382 GTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~----Vp~DPs~eeMrkVVCv~~ 457 (513)
T KOG2052|consen 382 GTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV----VPSDPSFEEMRKVVCVQK 457 (513)
T ss_pred ceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC----CCCCCCHHHHhcceeecc
Confidence 999999999986422 1236899999999999976421100000000000111 1111111222221 1122
Q ss_pred CCCCCC-----hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042486 579 MQGNYP-----PVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621 (635)
Q Consensus 579 ~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 621 (635)
++...| ......+.+|++.||..+|..|-|+--+-+.|.++.+
T Consensus 458 ~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 458 LRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred cCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 222222 3345668999999999999999999999999999875
No 200
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-34 Score=293.91 Aligned_cols=230 Identities=26% Similarity=0.387 Sum_probs=185.5
Q ss_pred ceEEEeee-CCcEEEEEEecc---------ChHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG---------DASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~---------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
..||++.. +.+.+|+|++.. .+.+|+..|.++ .|.+||+|++|-..++.+|||||| ...+|..+|...
T Consensus 375 SkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~-Gd~DL~kiL~k~ 453 (677)
T KOG0596|consen 375 SKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMEC-GDIDLNKILKKK 453 (677)
T ss_pred ceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeec-ccccHHHHHHhc
Confidence 58999998 567788887753 256899999999 589999999999999999999995 467999999876
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
......| .+..+..|++.|+.++|.++ |||.||||.|+|+- .|.+||+|||.|..+..... .......+||+.|
T Consensus 454 ~~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT-sI~kdsQvGT~NY 527 (677)
T KOG0596|consen 454 KSIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT-SIVKDSQVGTVNY 527 (677)
T ss_pred cCCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEE-eeeEEeeeechhcccCcccc-ceeeccccCcccc
Confidence 6554556 77788999999999999977 99999999999985 57999999999987765443 2344567899999
Q ss_pred cCccccccC-----------CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcC
Q 042486 511 MAPEYLENG-----------LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSM 579 (635)
Q Consensus 511 ~aPE~~~~~-----------~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~ 579 (635)
|+||.+... +.++++|||||||+||+|+.|+.||..+. +....+..++||..
T Consensus 528 MsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-----------------n~~aKl~aI~~P~~ 590 (677)
T KOG0596|consen 528 MSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-----------------NQIAKLHAITDPNH 590 (677)
T ss_pred cCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----------------HHHHHHHhhcCCCc
Confidence 999988531 25789999999999999999999985321 12245667777755
Q ss_pred CCCCChHHHHH-HHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 580 QGNYPPVTAIL-VIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 580 ~~~~~~~~~~~-l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.-++|..-... +.++++.||..||++||++.|++++
T Consensus 591 ~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 591 EIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred cccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 44444322222 8999999999999999999999875
No 201
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.3e-33 Score=287.94 Aligned_cols=252 Identities=24% Similarity=0.370 Sum_probs=193.1
Q ss_pred cccHHHHHHhhcCCCCCCccc----ceEEEeee--CCcEEEEEEecc------ChHHHHHHHhhh-ccCCcccEEEEEec
Q 042486 341 VYTFEELQAATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG------DASDQIKLLNKI-NHSSLIRLLGICFN 407 (635)
Q Consensus 341 ~~~~~el~~at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~------~~~~E~~~l~~l-~h~nIv~l~~~~~~ 407 (635)
.++.+++..++++|.....++ |.||++.. +++.+|+|.+.. .+.+|+.++.++ +|+|++++++++..
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 355667777888887777776 79999987 678999998853 245788999998 89999999999874
Q ss_pred C-----CeeEEEeecccCCCcchhhcc--cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcE
Q 042486 408 G-----GNWYLVYENAVNGSLSVWIND--KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA 480 (635)
Q Consensus 408 ~-----~~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 480 (635)
. +..++||||+++++|.+++.. .....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCE
Confidence 3 358999999999999998853 2234589999999999999999999985 49999999999999999999
Q ss_pred EEeeecCcccccccCCceeeecccccCCCccCccccccC-----CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHH
Q 042486 481 KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENG-----LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLV 555 (635)
Q Consensus 481 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~ 555 (635)
||+|||++........ ......++..|+|||.+... .++.++|||||||++|||++|+.|+....... .+.
T Consensus 168 kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~-~~~ 243 (291)
T cd06639 168 KLVDFGVSAQLTSTRL---RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK-TLF 243 (291)
T ss_pred EEeecccchhcccccc---cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH-HHH
Confidence 9999999876543221 11234678899999987643 36889999999999999999999875432211 111
Q ss_pred HhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 556 DVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 556 ~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..... ..+.+ ..+......+.+++.+||+.||++||++.|++++
T Consensus 244 ~~~~~--------------~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 244 KIPRN--------------PPPTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHhcC--------------CCCCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11000 00000 1122234458999999999999999999999875
No 202
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.4e-33 Score=295.74 Aligned_cols=223 Identities=23% Similarity=0.334 Sum_probs=175.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHH-HHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIK-LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +++.+|+|.+... +..|.. +++.++||||+++++.+..++..++||||+++|+|..++.
T Consensus 9 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 88 (325)
T cd05604 9 GKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQ 88 (325)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHH
Confidence 89999987 6889999988542 123333 4677899999999999999999999999999999998886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .......||.
T Consensus 89 ~~~--~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~---~~~~~~~gt~ 160 (325)
T cd05604 89 RER--SFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS---DTTTTFCGTP 160 (325)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC---CCcccccCCh
Confidence 543 3899999999999999999999854 9999999999999999999999999987432211 1123457899
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||++.+..++.++|||||||++|||++|+.||...+... . ...+....+ ..++..+
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~----------------~~~~~~~~~--~~~~~~~ 220 (325)
T cd05604 161 EYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE--M----------------YDNILHKPL--VLRPGAS 220 (325)
T ss_pred hhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH--H----------------HHHHHcCCc--cCCCCCC
Confidence 9999999999899999999999999999999999986432211 1 111111111 1112234
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKI 612 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~ev 612 (635)
..+.+++.+|++.||.+||++.+.
T Consensus 221 ~~~~~ll~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 221 LTAWSILEELLEKDRQRRLGAKED 244 (325)
T ss_pred HHHHHHHHHHhccCHHhcCCCCCC
Confidence 557899999999999999988643
No 203
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.6e-33 Score=280.40 Aligned_cols=229 Identities=27% Similarity=0.381 Sum_probs=182.9
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEec-CCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFN-GGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.+|+|++.. .+.+|++++++++|+|++++++.+.. +...+++|||+++++|.+++..
T Consensus 14 ~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~ 93 (257)
T cd08223 14 GEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKE 93 (257)
T ss_pred eEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHH
Confidence 89999987 678999998753 24568899999999999999998764 4467999999999999999976
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.....+++.++..++.+++.||.+||+.+ ++||||||+||+++.++.++|+|||++........ ......+++.
T Consensus 94 ~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~ 167 (257)
T cd08223 94 QKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD---MASTLIGTPY 167 (257)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccCC---ccccccCCcC
Confidence 54556899999999999999999999854 99999999999999999999999999876533221 2233568889
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||.+.+..++.++||||||+++++|++|+.|+...+.... .... ....+ ...+...+.
T Consensus 168 y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~-~~~~-----------------~~~~~-~~~~~~~~~ 228 (257)
T cd08223 168 YMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL-VYRI-----------------IEGKL-PPMPKDYSP 228 (257)
T ss_pred ccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH-HHHH-----------------HhcCC-CCCccccCH
Confidence 9999999998899999999999999999999998753322111 0011 00000 112334456
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+.+++.+||+.||++||++.|++++
T Consensus 229 ~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 229 ELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHHHHHHHhccCcccCCCHHHHhcC
Confidence 68999999999999999999999875
No 204
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.5e-33 Score=295.57 Aligned_cols=255 Identities=20% Similarity=0.275 Sum_probs=185.0
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEecc-ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcc
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG-DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~-~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~ 424 (635)
.+|.....|| |.||+|+. +++.||+|.... ....|+.++++++|+||+++++++..++..++|+||+. ++|.
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~ 144 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLY 144 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHH
Confidence 3455555554 89999998 567899997643 45689999999999999999999999999999999994 6888
Q ss_pred hhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccc
Q 042486 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504 (635)
Q Consensus 425 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 504 (635)
+++.... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .....
T Consensus 145 ~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~----~~~~~ 216 (357)
T PHA03209 145 TYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP----AFLGL 216 (357)
T ss_pred HHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccCc----ccccc
Confidence 8885433 34899999999999999999999855 9999999999999999999999999987533221 11235
Q ss_pred ccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchh---------hHHHHhhhcc------cccCCchh
Q 042486 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN---------MLLVDVLNPV------LHKEDGEE 569 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~---------~~l~~~~~~~------~~~~~~~~ 569 (635)
.||..|+|||++.+..++.++|||||||++|||+++..++....... ..+.+.+... +.......
T Consensus 217 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 296 (357)
T PHA03209 217 AGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSR 296 (357)
T ss_pred cccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccH
Confidence 68999999999999899999999999999999999766553221110 1111111110 00000011
Q ss_pred hhhhhcCCcCCCCCC---------hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 570 SLRHLMDPSMQGNYP---------PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 570 ~l~~~~d~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
....+.+.......+ ...+..+.+||.+||+.||++|||+.|+++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 297 LVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 111111100000000 0123346679999999999999999999976
No 205
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.3e-33 Score=282.39 Aligned_cols=230 Identities=25% Similarity=0.441 Sum_probs=183.2
Q ss_pred ceEEEeee--CCcEEEEEEecc----------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 423 (635)
|.||+|.. +++.+|+|.+.. .+.+|++++++++|+||+++++++.+.+..+++|||+++++|
T Consensus 14 ~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (267)
T cd06628 14 GSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSV 93 (267)
T ss_pred eEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCH
Confidence 89999987 678999997742 245789999999999999999999999999999999999999
Q ss_pred chhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc---eee
Q 042486 424 SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE---FAL 500 (635)
Q Consensus 424 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~---~~~ 500 (635)
.+++.... .+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||.++........ ...
T Consensus 94 ~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 168 (267)
T cd06628 94 AALLNNYG--AFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGA 168 (267)
T ss_pred HHHHHhcc--CccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcccccccccCCcccc
Confidence 99996543 3889999999999999999999854 999999999999999999999999998866422111 011
Q ss_pred ecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCC
Q 042486 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQ 580 (635)
Q Consensus 501 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~ 580 (635)
.....++..|+|||.+.+..++.++|+||||+++|+|++|+.||........ ... ......+
T Consensus 169 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~--------------~~~~~~~--- 230 (267)
T cd06628 169 RPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA-IFK--------------IGENASP--- 230 (267)
T ss_pred ccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH-HHH--------------HhccCCC---
Confidence 1224578899999999988899999999999999999999999864322110 000 0001111
Q ss_pred CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 581 GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 581 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+...+..+.+++.+||+.||.+||++.|++++
T Consensus 231 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 231 -EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred -cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 2223345568999999999999999999999864
No 206
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.1e-33 Score=299.49 Aligned_cols=248 Identities=20% Similarity=0.239 Sum_probs=190.6
Q ss_pred cHHHHHHhhcCCCCCCccc----ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEe
Q 042486 343 TFEELQAATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICF 406 (635)
Q Consensus 343 ~~~el~~at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~ 406 (635)
.+.++....++|.....|| |.||+++. +++.+|+|.+.. .+.+|+.+++.++||||+++++.+.
T Consensus 34 ~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~ 113 (371)
T cd05622 34 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 113 (371)
T ss_pred HHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 3455555667777777676 89999988 678999998753 1447889999999999999999999
Q ss_pred cCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeec
Q 042486 407 NGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFA 486 (635)
Q Consensus 407 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 486 (635)
+++..++||||+++|+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 114 DDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCC
Confidence 999999999999999999998653 2788889999999999999999855 9999999999999999999999999
Q ss_pred CcccccccCCceeeecccccCCCccCccccccC----CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhccc
Q 042486 487 LARPAERQEGEFALTSHIVGTKGYMAPEYLENG----LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVL 562 (635)
Q Consensus 487 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~ 562 (635)
+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...+... .
T Consensus 188 ~a~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~--------- 255 (371)
T cd05622 188 TCMKMNKEGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-T--------- 255 (371)
T ss_pred ceeEcCcCCc--ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH-H---------
Confidence 9976543211 122345799999999998653 37899999999999999999999986432211 1
Q ss_pred ccCCchhhhhhhcCC--cCCCCCChHHHHHHHHHHHHhhhcCCCC--CCCHHHHHHHH
Q 042486 563 HKEDGEESLRHLMDP--SMQGNYPPVTAILVIRLIESCLKKDPSG--RPAMDKIAQSI 616 (635)
Q Consensus 563 ~~~~~~~~l~~~~d~--~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L 616 (635)
...++.. .+........+..+.+++.+||..++.+ |++++|++++.
T Consensus 256 --------~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 256 --------YSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred --------HHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 1111110 0111111234556889999999844433 78999999875
No 207
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.8e-33 Score=306.19 Aligned_cols=252 Identities=23% Similarity=0.337 Sum_probs=181.6
Q ss_pred CCCCCCccc----ceEEEeee--CCcEEEEEEeccC---hHHHHHHHhhhccCCcccEEEEEecC--------CeeEEEe
Q 042486 353 DFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGD---ASDQIKLLNKINHSSLIRLLGICFNG--------GNWYLVY 415 (635)
Q Consensus 353 ~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~---~~~E~~~l~~l~h~nIv~l~~~~~~~--------~~~~lV~ 415 (635)
+|.....|| |.||+|.. +++.||||++..+ ..+|+.+|++++|+||+++++++... ...++||
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm 146 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM 146 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence 454444554 89999987 6789999988643 45799999999999999999987532 2367999
Q ss_pred ecccCCCcchhhcc--cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC-cEEEeeecCccccc
Q 042486 416 ENAVNGSLSVWIND--KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF-RAKIANFALARPAE 492 (635)
Q Consensus 416 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~a~~~~ 492 (635)
||+++ +|.+++.. .....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++...
T Consensus 147 E~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~ 222 (440)
T PTZ00036 147 EFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL 222 (440)
T ss_pred ecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccccchhcc
Confidence 99975 77776632 22345899999999999999999999855 99999999999998664 79999999998654
Q ss_pred ccCCceeeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhh
Q 042486 493 RQEGEFALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESL 571 (635)
Q Consensus 493 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l 571 (635)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+..... .+.... .+.+
T Consensus 223 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~-~~~~p~-~~~~ 295 (440)
T PTZ00036 223 AGQR----SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQ-VLGTPT-EDQL 295 (440)
T ss_pred CCCC----cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH-HhCCCC-HHHH
Confidence 3221 123468999999998865 468999999999999999999999986543222 1111111 111110 0111
Q ss_pred hhh----cC---C-----cCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 572 RHL----MD---P-----SMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 572 ~~~----~d---~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+ .+ + .+...+|...+..+.+|+.+||+.||.+|||+.|++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 100 00 0 01111222334568999999999999999999999976
No 208
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.1e-32 Score=281.94 Aligned_cols=226 Identities=25% Similarity=0.392 Sum_probs=184.1
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|+. ++..||+|.+.. .+.+|+.++++++|+||+++++.+.+++..++||||+++++|.+++...
T Consensus 18 ~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~- 96 (277)
T cd06640 18 GEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG- 96 (277)
T ss_pred eEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcC-
Confidence 89999987 578999998753 2557899999999999999999999999999999999999999998643
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
.+++.+...++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++........ ......++..|+
T Consensus 97 --~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~ 168 (277)
T cd06640 97 --PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI---KRNTFVGTPFWM 168 (277)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCcc---ccccccCccccc
Confidence 388999999999999999999984 599999999999999999999999999875543221 122345788999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHH
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l 591 (635)
|||++.+..++.++|+||||+++|||++|+.|+........ .. ..........+...+..+
T Consensus 169 apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~-----------------~~~~~~~~~~~~~~~~~~ 229 (277)
T cd06640 169 APEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--LF-----------------LIPKNNPPTLTGEFSKPF 229 (277)
T ss_pred CHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--hh-----------------hhhcCCCCCCchhhhHHH
Confidence 99999888899999999999999999999998753221110 00 000111122334456678
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+++.+||+.+|++||++++++.+
T Consensus 230 ~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 230 KEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHcccCcccCcCHHHHHhC
Confidence 999999999999999999999887
No 209
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.2e-33 Score=286.45 Aligned_cols=231 Identities=25% Similarity=0.319 Sum_probs=183.6
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|+||++.. +++.+|+|.+... +.+|+++|++++|+||+++.+.+..++..+++|||+++++|.+++..
T Consensus 14 g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 93 (285)
T cd05632 14 GEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYN 93 (285)
T ss_pred eEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHH
Confidence 89999988 6889999987531 45699999999999999999999999999999999999999998865
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++........ .....|+..
T Consensus 94 ~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~----~~~~~g~~~ 166 (285)
T cd05632 94 MGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES----IRGRVGTVG 166 (285)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCCc----ccCCCCCcC
Confidence 54445999999999999999999999854 99999999999999999999999999865432211 123468999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||.+.+..++.++|+||||+++|||++|+.||........ ....... .... ...++...+.
T Consensus 167 ~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~~~-------------~~~~--~~~~~~~~~~ 230 (285)
T cd05632 167 YMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVDRR-------------VLET--EEVYSAKFSE 230 (285)
T ss_pred ccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHh-------------hhcc--ccccCccCCH
Confidence 9999999988899999999999999999999999864322111 0000000 0000 0112233345
Q ss_pred HHHHHHHHhhhcCCCCCCC-----HHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPA-----MDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs-----~~evl~~ 615 (635)
.+.+|+.+||+.||++||+ +++++.+
T Consensus 231 ~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 231 EAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred HHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 5789999999999999999 6677665
No 210
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.5e-32 Score=281.77 Aligned_cols=230 Identities=23% Similarity=0.362 Sum_probs=180.5
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||+|+. ++..+++|.+.. .+.+|++++++++|+||+++++++..++..++|+||+++++|..++....
T Consensus 19 g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~- 97 (282)
T cd06643 19 GKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE- 97 (282)
T ss_pred eEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcC-
Confidence 89999998 567889998753 24568999999999999999999999999999999999999998875432
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... .......++..|+|
T Consensus 98 ~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~y~a 171 (282)
T cd06643 98 RPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---QRRDSFIGTPYWMA 171 (282)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc---cccccccccccccC
Confidence 34899999999999999999999854 9999999999999999999999999987543221 11233568899999
Q ss_pred ccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 513 PEYLE-----NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 513 PE~~~-----~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
||++. +..++.++|||||||++|||++|+.|+........ ....... ..+. ...+...
T Consensus 172 PE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~--------------~~~~--~~~~~~~ 234 (282)
T cd06643 172 PEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-LLKIAKS--------------EPPT--LAQPSRW 234 (282)
T ss_pred HhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-HHHHhhc--------------CCCC--CCCcccc
Confidence 99984 34578899999999999999999988754322111 1111000 0000 0112234
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+..+.+++.+||+.||.+||++.+++++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 235 SSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 4568999999999999999999998765
No 211
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.2e-33 Score=285.65 Aligned_cols=248 Identities=24% Similarity=0.375 Sum_probs=186.4
Q ss_pred HHHHHHhhcCCCCCCccc----ceEEEeee--CCcEEEEEEecc------ChHHHHHHHhhh-ccCCcccEEEEEec---
Q 042486 344 FEELQAATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG------DASDQIKLLNKI-NHSSLIRLLGICFN--- 407 (635)
Q Consensus 344 ~~el~~at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~------~~~~E~~~l~~l-~h~nIv~l~~~~~~--- 407 (635)
+.++..+.+.|.....+| |.||+|+. +++.+|+|.+.. ++..|+.+++++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 87 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP 87 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc
Confidence 334444445555444444 89999998 678999998743 345688888888 79999999999863
Q ss_pred ---CCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEee
Q 042486 408 ---GGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIAN 484 (635)
Q Consensus 408 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 484 (635)
.+..+++|||+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|
T Consensus 88 ~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l~d 164 (282)
T cd06636 88 PGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKLVD 164 (282)
T ss_pred cCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEee
Confidence 456899999999999999996654455889999999999999999999855 99999999999999999999999
Q ss_pred ecCcccccccCCceeeecccccCCCccCccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhh
Q 042486 485 FALARPAERQEGEFALTSHIVGTKGYMAPEYLE-----NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559 (635)
Q Consensus 485 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~ 559 (635)
||++........ ......++..|+|||.+. ...++.++||||||+++|||++|+.||......... .
T Consensus 165 fg~~~~~~~~~~---~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~-~---- 236 (282)
T cd06636 165 FGVSAQLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL-F---- 236 (282)
T ss_pred Ccchhhhhcccc---CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh-h----
Confidence 999875432211 122356889999999875 345788999999999999999999998532211100 0
Q ss_pred cccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 560 PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 560 ~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...............+..+.+++.+||+.||.+||++.|++++
T Consensus 237 -------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 237 -------------LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred -------------hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 0000000011112234568999999999999999999999864
No 212
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.2e-32 Score=277.22 Aligned_cols=232 Identities=26% Similarity=0.462 Sum_probs=183.0
Q ss_pred ceEEEeee-CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||++.. +++.||+|..+. .+.+|++++++++|+||+++++++.+.+..++||||+++++|.+++.....
T Consensus 9 g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~ 88 (251)
T cd05041 9 GDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKN 88 (251)
T ss_pred ceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCC
Confidence 89999998 489999998764 245799999999999999999999999999999999999999999965432
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
.+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||++......... ........+..|+|
T Consensus 89 -~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~y~~ 163 (251)
T cd05041 89 -RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT-VSDGLKQIPIKWTA 163 (251)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcce-eccccCcceeccCC
Confidence 488999999999999999999984 4999999999999999999999999998755321110 11112233567999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l 591 (635)
||.+.++.++.++|+||||+++|||++ |..|+....... ..... ........+...+..+
T Consensus 164 PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--~~~~~-----------------~~~~~~~~~~~~~~~~ 224 (251)
T cd05041 164 PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--TRERI-----------------ESGYRMPAPQLCPEEI 224 (251)
T ss_pred hHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH--HHHHH-----------------hcCCCCCCCccCCHHH
Confidence 999988889999999999999999999 676664322211 11111 0111111233345569
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.+++.+||..+|++||++.|+++.|.
T Consensus 225 ~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 225 YRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHhccChhhCcCHHHHHHHhh
Confidence 99999999999999999999999885
No 213
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.8e-33 Score=283.71 Aligned_cols=233 Identities=28% Similarity=0.510 Sum_probs=181.9
Q ss_pred ceEEEeeeCC--------cEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKIGG--------DFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~~~--------~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
|.||+|+..+ ..+|+|.+.. .+.+|++++++++|+||+++++++...+..++||||+++++|.+
T Consensus 9 g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 88 (269)
T cd05044 9 GEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLS 88 (269)
T ss_pred eeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHH
Confidence 7999998732 5789997743 24578999999999999999999999889999999999999999
Q ss_pred hhccc-----CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC-----cEEEeeecCcccccccC
Q 042486 426 WINDK-----GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF-----RAKIANFALARPAERQE 495 (635)
Q Consensus 426 ~l~~~-----~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~-----~~kl~Dfg~a~~~~~~~ 495 (635)
++... ....+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++ .++|+|||++.......
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~ 165 (269)
T cd05044 89 YLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSD 165 (269)
T ss_pred HHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccccccccccc
Confidence 99542 2234889999999999999999999854 99999999999998877 89999999987553221
Q ss_pred CceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhh
Q 042486 496 GEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL 574 (635)
Q Consensus 496 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 574 (635)
. ........++..|+|||++.++.++.++||||||+++|||++ |+.||....... ....+.
T Consensus 166 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--~~~~~~--------------- 227 (269)
T cd05044 166 Y-YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--VLQHVT--------------- 227 (269)
T ss_pred c-cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--HHHHHh---------------
Confidence 1 111122345678999999999999999999999999999998 888875322211 111110
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 575 MDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 575 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.......+...+..+.+++.+||..+|.+||+++++++.|.
T Consensus 228 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 228 --AGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred --cCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00011122334566899999999999999999999999886
No 214
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=9.5e-33 Score=286.40 Aligned_cols=237 Identities=26% Similarity=0.422 Sum_probs=183.5
Q ss_pred ceEEEeee--CCc----EEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGD----FVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~----~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|.+ ++. .||+|.+..+ +.+|+.++++++|+||++++++|... ..++++||+++|+|.+++
T Consensus 21 g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~ 99 (303)
T cd05110 21 GTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYV 99 (303)
T ss_pred ccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHH
Confidence 89999987 444 5788877643 45788999999999999999998654 467999999999999998
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++........ .......++
T Consensus 100 ~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~ 174 (303)
T cd05110 100 HEHK-DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE-YNADGGKMP 174 (303)
T ss_pred Hhcc-cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccCcccc-cccCCCccc
Confidence 6543 2389999999999999999999985 4999999999999999999999999999865432211 111223456
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
..|+|||.+.+..++.++||||||+++|||++ |+.||....... ..++... ......+..
T Consensus 175 ~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~--~~~~~~~-----------------~~~~~~~~~ 235 (303)
T cd05110 175 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE--IPDLLEK-----------------GERLPQPPI 235 (303)
T ss_pred cccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHC-----------------CCCCCCCCC
Confidence 78999999998889999999999999999998 888875322111 1111110 000011122
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
.+..+.+++.+||..+|++||+++++++.|+++....
T Consensus 236 ~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 236 CTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 3345889999999999999999999999999987554
No 215
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=5.4e-33 Score=289.83 Aligned_cols=182 Identities=26% Similarity=0.360 Sum_probs=147.8
Q ss_pred ceEEEeee----CCcEEEEEEecc-----ChHHHHHHHhhhccCCcccEEEEEec--CCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI----GGDFVAIKKVYG-----DASDQIKLLNKINHSSLIRLLGICFN--GGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~----~~~~vavK~~~~-----~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+++. ++..||+|.+.. .+.+|+++|++++|+||+++++++.. +...++||||+.+ +|.+++...
T Consensus 15 g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~ 93 (317)
T cd07867 15 GHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFH 93 (317)
T ss_pred eeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhh
Confidence 89999986 346899998865 35689999999999999999999864 4567999999864 777776321
Q ss_pred -------CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEE----CCCCcEEEeeecCcccccccCCcee
Q 042486 431 -------GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL----DTDFRAKIANFALARPAERQEGEFA 499 (635)
Q Consensus 431 -------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll----~~~~~~kl~Dfg~a~~~~~~~~~~~ 499 (635)
....+++..+..++.|++.||.|||+.+ ++||||||+||++ +.++.+||+|||+++..........
T Consensus 94 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~ 170 (317)
T cd07867 94 RASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA 170 (317)
T ss_pred hccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccccc
Confidence 1234889999999999999999999854 9999999999999 5667999999999986543322212
Q ss_pred eecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 042486 500 LTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALY 547 (635)
Q Consensus 500 ~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~ 547 (635)
......+|..|+|||.+.+ ..++.++|||||||++|||+||+.||...
T Consensus 171 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 171 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 2234578999999999876 45799999999999999999999998643
No 216
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.5e-32 Score=281.21 Aligned_cols=237 Identities=25% Similarity=0.427 Sum_probs=186.0
Q ss_pred ceEEEeee--CCc----EEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGD----FVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~----~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|.. ++. .+|+|....+ +.+|+.++++++|+||+++++++.. ...++||||+++|+|.+++
T Consensus 21 g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l 99 (279)
T cd05057 21 GTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYV 99 (279)
T ss_pred ccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHH
Confidence 89999986 332 6899987543 4578999999999999999999987 7889999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
..... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++......... ......++
T Consensus 100 ~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~-~~~~~~~~ 174 (279)
T cd05057 100 RNHKD-NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEY-HAEGGKVP 174 (279)
T ss_pred HhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccccCcccce-ecCCCccc
Confidence 66443 389999999999999999999984 49999999999999999999999999998665332211 11112235
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
..|+|||.+....++.++|+||||+++||+++ |+.||.....++ +...+. .......+..
T Consensus 175 ~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~-----------------~~~~~~~~~~ 235 (279)
T cd05057 175 IKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--IPDLLE-----------------KGERLPQPPI 235 (279)
T ss_pred ccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHh-----------------CCCCCCCCCC
Confidence 67999999988889999999999999999999 998875432211 111110 0001111222
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
.+..+.+++.+||..||++||++.++++.|+++....
T Consensus 236 ~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 236 CTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 3455889999999999999999999999999997643
No 217
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=7.2e-33 Score=283.25 Aligned_cols=226 Identities=26% Similarity=0.395 Sum_probs=182.3
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|.. ++..||+|.+.. .+.+|++++++++|+||+++++++..++..++||||+++++|.+++...
T Consensus 18 ~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~- 96 (277)
T cd06642 18 GEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPG- 96 (277)
T ss_pred eeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhcC-
Confidence 89999987 578999998763 2567999999999999999999999999999999999999999998642
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
.+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++........ ......++..|+
T Consensus 97 --~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~ 168 (277)
T cd06642 97 --PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI---KRNTFVGTPFWM 168 (277)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch---hhhcccCccccc
Confidence 389999999999999999999984 599999999999999999999999999876543221 112245788999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHH
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l 591 (635)
|||++.+..++.++||||||+++|||++|+.|+......... .. .........+...+..+
T Consensus 169 aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~--~~-----------------~~~~~~~~~~~~~~~~~ 229 (277)
T cd06642 169 APEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL--FL-----------------IPKNSPPTLEGQYSKPF 229 (277)
T ss_pred CHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH--hh-----------------hhcCCCCCCCcccCHHH
Confidence 999999888999999999999999999999887532211100 00 00000111122344568
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+++.+||+.+|++||++.|++++
T Consensus 230 ~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 230 KEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHccCCcccCcCHHHHHHh
Confidence 999999999999999999999985
No 218
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.6e-33 Score=299.25 Aligned_cols=246 Identities=21% Similarity=0.260 Sum_probs=183.9
Q ss_pred ceEEEeee----CCcEEEEEEecc--ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCC
Q 042486 362 GSVYRGKI----GGDFVAIKKVYG--DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFL 435 (635)
Q Consensus 362 g~Vy~g~~----~~~~vavK~~~~--~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l 435 (635)
|.||++.. .+..||+|.+.. ...+|+++|++++|+||+++++++..++..+++||++. ++|.+++... ..+
T Consensus 106 g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~l 182 (392)
T PHA03207 106 GEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRS--GPL 182 (392)
T ss_pred eEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhc--CCC
Confidence 89999875 346899998865 45689999999999999999999999999999999985 6888888433 348
Q ss_pred CHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccc
Q 042486 436 DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEY 515 (635)
Q Consensus 436 ~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~ 515 (635)
++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++........ .......||..|+|||+
T Consensus 183 ~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~ 258 (392)
T PHA03207 183 PLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDT-PQCYGWSGTLETNSPEL 258 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCccccc-ccccccccccCccCHhH
Confidence 99999999999999999999854 999999999999999999999999999765433211 12234579999999999
Q ss_pred cccCCCCcccchhhHHHHHHHHHhCCCCCCCCcch--hhHHHHhhhccc------ccCCch---hhhhhhcCCcCCCCC-
Q 042486 516 LENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE--NMLLVDVLNPVL------HKEDGE---ESLRHLMDPSMQGNY- 583 (635)
Q Consensus 516 ~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~--~~~l~~~~~~~~------~~~~~~---~~l~~~~d~~~~~~~- 583 (635)
+....++.++|||||||++|||++|+.||...... ...+.......- ...... ..+..+.. .....+
T Consensus 259 ~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 337 (392)
T PHA03207 259 LALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAI-VLRPPYT 337 (392)
T ss_pred hcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcc-cccCCcc
Confidence 99888999999999999999999999998653321 111111111100 000000 00111100 000000
Q ss_pred -C-----hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 584 -P-----PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 584 -~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+ ...+..+.++|.+||..||++||++.|++.+
T Consensus 338 ~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 338 IPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred ccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 1124457899999999999999999999987
No 219
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.3e-32 Score=280.00 Aligned_cols=237 Identities=22% Similarity=0.338 Sum_probs=176.8
Q ss_pred ceEEEeeeC----CcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKIG----GDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~~----~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+|+.. +..+|+|+++. .+.+|+.++++++|+||+++++++.+....++||||+++|+|.+++..
T Consensus 9 g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 88 (269)
T cd05087 9 GKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRS 88 (269)
T ss_pred ceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHH
Confidence 899999863 35799998864 245689999999999999999999988889999999999999999954
Q ss_pred cC---CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccccc
Q 042486 430 KG---GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506 (635)
Q Consensus 430 ~~---~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g 506 (635)
.. ....++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........ ........+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~ 164 (269)
T cd05087 89 CRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-YVTPDQLWV 164 (269)
T ss_pred hhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcce-eecCCCcCC
Confidence 22 224677888899999999999999854 99999999999999999999999999875432211 111123456
Q ss_pred CCCccCccccccC-------CCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCc
Q 042486 507 TKGYMAPEYLENG-------LVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578 (635)
Q Consensus 507 t~~y~aPE~~~~~-------~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~ 578 (635)
+..|+|||++.+. .++.++||||||+++|||++ |+.||............... ....+.++.
T Consensus 165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~----------~~~~~~~~~ 234 (269)
T cd05087 165 PLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVRE----------QQLKLPKPR 234 (269)
T ss_pred cccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhc----------ccCCCCCCc
Confidence 7889999988642 35789999999999999996 99888543322211110000 000111122
Q ss_pred CCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 579 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
+.. .....+.+++..|+ .+|++|||++||+..|+
T Consensus 235 ~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 235 LKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111 12344788999999 68999999999998774
No 220
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.2e-32 Score=280.32 Aligned_cols=235 Identities=26% Similarity=0.364 Sum_probs=183.7
Q ss_pred ceEEEeeeC-----CcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKIG-----GDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~~-----~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|... ...||||..... +.+|+.++++++|+||+++++++.+ +..++||||+++|+|.+++.
T Consensus 20 g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~ 98 (270)
T cd05056 20 GDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQ 98 (270)
T ss_pred eeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHH
Confidence 899999872 236899987542 4579999999999999999999865 55789999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
.... .+++..++.++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++....... .......++.
T Consensus 99 ~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~ 172 (270)
T cd05056 99 VNKY-SLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY--YKASKGKLPI 172 (270)
T ss_pred hCCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecccccc--eecCCCCccc
Confidence 5432 4899999999999999999999854 99999999999999999999999999876543311 1112223456
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
.|+|||.+....++.++||||||+++|||++ |..||........ ...... .. ....+...
T Consensus 173 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--~~~~~~-------------~~----~~~~~~~~ 233 (270)
T cd05056 173 KWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV--IGRIEN-------------GE----RLPMPPNC 233 (270)
T ss_pred cccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHc-------------CC----cCCCCCCC
Confidence 8999999988889999999999999999986 9988754332211 111100 00 00112334
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhh
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 622 (635)
+..+.+++.+|+..+|.+||++.++++.|+.+..+
T Consensus 234 ~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 234 PPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 45689999999999999999999999999998764
No 221
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=9.6e-33 Score=280.38 Aligned_cols=230 Identities=22% Similarity=0.294 Sum_probs=179.6
Q ss_pred ceEEEeee--CCcEEEEEEecc------------ChHHHHHHHhhhccCCcccEEEEEecC--CeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG------------DASDQIKLLNKINHSSLIRLLGICFNG--GNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~------------~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~ 425 (635)
|.||+|.. +++.||||.+.. .+.+|++++++++|+||+++++++.+. ...+++|||+++++|.+
T Consensus 16 g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~ 95 (265)
T cd06652 16 GRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKD 95 (265)
T ss_pred eEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHH
Confidence 89999987 678999998742 234689999999999999999988763 45789999999999999
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++.... .+++.....++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++................
T Consensus 96 ~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 170 (265)
T cd06652 96 QLKSYG--ALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVT 170 (265)
T ss_pred HHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCC
Confidence 986543 3788999999999999999999855 99999999999999999999999999875532211111122345
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
++..|+|||.+.+..++.++||||||+++|||++|+.||....... ...+..........+.
T Consensus 171 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------------------~~~~~~~~~~~~~~~~ 232 (265)
T cd06652 171 GTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA------------------AIFKIATQPTNPVLPP 232 (265)
T ss_pred CCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH------------------HHHHHhcCCCCCCCch
Confidence 8889999999988889999999999999999999999975322111 0111111111122344
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.....+.+++.+|+. +|++||+++|++++
T Consensus 233 ~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 233 HVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred hhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 556678899999995 99999999999865
No 222
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.1e-33 Score=300.62 Aligned_cols=230 Identities=22% Similarity=0.294 Sum_probs=177.4
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||||.++. .+.+|+.++.+++|+||+++++.+.+++..|+||||+++|+|.+++..
T Consensus 15 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 94 (360)
T cd05627 15 GEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK 94 (360)
T ss_pred EEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh
Confidence 89999987 688999998853 244688999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc------------
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE------------ 497 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~------------ 497 (635)
.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.........
T Consensus 95 ~~--~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~ 169 (360)
T cd05627 95 KD--TLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPS 169 (360)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcc
Confidence 43 3899999999999999999999854 999999999999999999999999998754321100
Q ss_pred --------------------eeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHh
Q 042486 498 --------------------FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557 (635)
Q Consensus 498 --------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~ 557 (635)
........||+.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~-~--- 245 (360)
T cd05627 170 DFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET-Y--- 245 (360)
T ss_pred cccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHH-H---
Confidence 0011234699999999999998999999999999999999999999864332211 0
Q ss_pred hhcccccCCchhhhhhhcCCcCCCCCCh--HHHHHHHHHHHHhhhcCCCCCCC---HHHHHHH
Q 042486 558 LNPVLHKEDGEESLRHLMDPSMQGNYPP--VTAILVIRLIESCLKKDPSGRPA---MDKIAQS 615 (635)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~d~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 615 (635)
..++........+. ..+..+.+++.+|+ .||.+|++ ++|+++|
T Consensus 246 --------------~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 246 --------------RKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred --------------HHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 11111000000111 12345788888876 49999985 5666655
No 223
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.4e-33 Score=287.44 Aligned_cols=228 Identities=23% Similarity=0.386 Sum_probs=183.2
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||+++. +++.||+|.+.. .+.+|+.++++++|+||+++++++..++..++||||+++++|.+++...
T Consensus 33 g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-- 110 (297)
T cd06656 33 GTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-- 110 (297)
T ss_pred eEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC--
Confidence 89999986 789999998853 2457899999999999999999999999999999999999999998643
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
.+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........ ......+++.|+|
T Consensus 111 -~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~~y~a 183 (297)
T cd06656 111 -CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSTMVGTPYWMA 183 (297)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCcc---CcCcccCCccccC
Confidence 3799999999999999999999854 99999999999999999999999999875433221 1123467889999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
||.+.+..++.++|+||||+++|+|++|+.||...+....... . ..........+...+..+.
T Consensus 184 PE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-----~------------~~~~~~~~~~~~~~~~~~~ 246 (297)
T cd06656 184 PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-----I------------ATNGTPELQNPERLSAVFR 246 (297)
T ss_pred HHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-----e------------ccCCCCCCCCccccCHHHH
Confidence 9999988899999999999999999999999854322111000 0 0000001112233455688
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHH
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+++.+||..||++||++++++++
T Consensus 247 ~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 247 DFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999986
No 224
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.2e-33 Score=285.19 Aligned_cols=245 Identities=23% Similarity=0.292 Sum_probs=181.4
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+++. +|..+|+|+++. .+.+|++++++++|+||+++++++.+.+..++++||++ ++|.+++...
T Consensus 14 ~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~ 92 (284)
T cd07839 14 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSC 92 (284)
T ss_pred eEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHhc
Confidence 89999998 688999998853 35679999999999999999999999999999999996 5788887543
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
. ..+++..+..++.||++||.|||+.+ ++||||||+||+++.++.+||+|||+++....... ......++..|
T Consensus 93 ~-~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y 165 (284)
T cd07839 93 N-GDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR---CYSAEVVTLWY 165 (284)
T ss_pred C-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCCC---CcCCCccccCC
Confidence 3 33899999999999999999999854 99999999999999999999999999875533221 11234578899
Q ss_pred cCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc--hhhhhhhcCCcCCC------
Q 042486 511 MAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG--EESLRHLMDPSMQG------ 581 (635)
Q Consensus 511 ~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~l~~~~d~~~~~------ 581 (635)
+|||.+.+. .++.++||||||+++|||++|+.|+.........+..... .+..... ........+.....
T Consensus 166 ~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd07839 166 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR-LLGTPTEESWPGVSKLPDYKPYPMYPATT 244 (284)
T ss_pred cChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHH-HhCCCChHHhHHhhhcccccccCCCCCcc
Confidence 999988764 4689999999999999999999886543322222111111 1110000 00011111110000
Q ss_pred ---CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 582 ---NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 582 ---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
......+..+.+++.+||+.||.+|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 245 SLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred hhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0112234568899999999999999999999875
No 225
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.7e-33 Score=289.11 Aligned_cols=244 Identities=23% Similarity=0.337 Sum_probs=180.9
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|+. ++..||+|.++. .+.+|+.++++++|+||+++++++..++..++||||++ ++|.+++....
T Consensus 20 g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~ 98 (301)
T cd07873 20 ATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCG 98 (301)
T ss_pred EEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcC
Confidence 89999987 678999998853 24579999999999999999999999999999999997 58988886543
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
..+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++........ ......++..|+
T Consensus 99 -~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~ 171 (301)
T cd07873 99 -NSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK---TYSNEVVTLWYR 171 (301)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC---cccccceeeccc
Confidence 24889999999999999999999854 99999999999999999999999999875432221 112245688999
Q ss_pred Ccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc--------hhhhhhhcCCcCCCC
Q 042486 512 APEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG--------EESLRHLMDPSMQGN 582 (635)
Q Consensus 512 aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--------~~~l~~~~d~~~~~~ 582 (635)
|||.+.+ ..++.++||||||+++|||++|+.||...+.... ...+...+..... .+.......+.....
T Consensus 172 ~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (301)
T cd07873 172 PPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ--LHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRAD 249 (301)
T ss_pred CcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHcCCCChhhchhhhccccccccccCccccc
Confidence 9998865 4578899999999999999999999865433221 1111111100000 000000000111000
Q ss_pred ----CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 583 ----YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 583 ----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.....+..+.+|+.+||+.||.+|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 250 CLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111234458899999999999999999999875
No 226
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.7e-33 Score=297.24 Aligned_cols=244 Identities=24% Similarity=0.287 Sum_probs=180.7
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCC-----eeEEEeecccCCCcch
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGG-----NWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~lV~E~~~~gsL~~ 425 (635)
|.||++.. +++.||||++.. .+.+|+++++.++|+||+++++++...+ ..|+|+||+. ++|.+
T Consensus 14 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~ 92 (372)
T cd07853 14 GVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHK 92 (372)
T ss_pred EEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHH
Confidence 89999986 789999998854 2457999999999999999999998766 7899999996 57888
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++.... .+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....... .......
T Consensus 93 ~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~--~~~~~~~ 165 (372)
T cd07853 93 IIVSPQ--PLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES--KHMTQEV 165 (372)
T ss_pred HHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecccCcc--ccCCCCC
Confidence 775433 4899999999999999999999855 99999999999999999999999999975433221 1122346
Q ss_pred cCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchh------hhhhhc-CC
Q 042486 506 GTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEE------SLRHLM-DP 577 (635)
Q Consensus 506 gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~------~l~~~~-d~ 577 (635)
++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ..+.+...+....... .....+ ..
T Consensus 166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 243 (372)
T cd07853 166 VTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ--QLDLITDLLGTPSLEAMRSACEGARAHILRG 243 (372)
T ss_pred cCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHcCCCCHHHHHHhhHHHHHHHHhC
Confidence 7889999999876 457899999999999999999999986543221 1111111111111100 000000 00
Q ss_pred cCC-------CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 578 SMQ-------GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 578 ~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
... .......+..+.+|+.+||+.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 244 PHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000 01112234568899999999999999999999986
No 227
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=8.6e-33 Score=288.34 Aligned_cols=243 Identities=24% Similarity=0.356 Sum_probs=188.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||++.. +++.+|+|.+..+ +.+|++++++++|+||+++++.+.+++..++||||+.+++|.+++..
T Consensus 15 g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 94 (316)
T cd05574 15 GRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQR 94 (316)
T ss_pred EEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHh
Confidence 89999988 5789999988542 45689999999999999999999999999999999999999999976
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCce-----------
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF----------- 498 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~----------- 498 (635)
.....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++..........
T Consensus 95 ~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~ 171 (316)
T cd05574 95 QPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRS 171 (316)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccc
Confidence 54456899999999999999999999854 9999999999999999999999999987543221100
Q ss_pred ---------------eeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccc
Q 042486 499 ---------------ALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563 (635)
Q Consensus 499 ---------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~ 563 (635)
.......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...+.... +
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~--------- 241 (316)
T cd05574 172 SVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET-F--------- 241 (316)
T ss_pred cccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH-H---------
Confidence 011234678899999999988899999999999999999999999864332211 1
Q ss_pred cCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCC----HHHHHHHHHHHHhhcccccc
Q 042486 564 KEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA----MDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 564 ~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~~L~~~~~~s~~w~~ 628 (635)
..+.+...........+..+.+++.+||+.||++||+ ++|++.+ .++.. .+|..
T Consensus 242 --------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~--~~~~~-~~~~~ 299 (316)
T cd05574 242 --------SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH--PFFRG-VNWAL 299 (316)
T ss_pred --------HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC--chhhc-CChhh
Confidence 1111111111111114566999999999999999999 7777775 33332 44543
No 228
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.6e-32 Score=277.66 Aligned_cols=232 Identities=25% Similarity=0.356 Sum_probs=183.6
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||+++. +++.+++|.+.. .+.+|++++++++|+||+++++++.+++..+++|||+++++|.+++....
T Consensus 17 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~- 95 (262)
T cd06613 17 GDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTR- 95 (262)
T ss_pred eEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhc-
Confidence 79999987 578899998754 25679999999999999999999999999999999999999999986542
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++........ ......++..|+|
T Consensus 96 ~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~~ 169 (262)
T cd06613 96 GPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA---KRKSFIGTPYWMA 169 (262)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhhh---ccccccCCccccC
Confidence 23899999999999999999999855 99999999999999999999999999875543211 1223467889999
Q ss_pred ccccccC---CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 513 PEYLENG---LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 513 PE~~~~~---~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
||.+.+. .++.++|+||||+++|||++|+.|+.......... ..... .+..+. ...+...+.
T Consensus 170 Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~-~~~~~------------~~~~~~--~~~~~~~~~ 234 (262)
T cd06613 170 PEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF-LISKS------------NFPPPK--LKDKEKWSP 234 (262)
T ss_pred chhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhc------------cCCCcc--ccchhhhhH
Confidence 9998766 78999999999999999999999986433221111 00000 000000 111233456
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+.+++.+||..||.+||++.+++.+
T Consensus 235 ~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 235 VFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 68999999999999999999999864
No 229
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-32 Score=289.86 Aligned_cols=239 Identities=27% Similarity=0.443 Sum_probs=185.1
Q ss_pred ceEEEeeeC---------CcEEEEEEecc--------ChHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCc
Q 042486 362 GSVYRGKIG---------GDFVAIKKVYG--------DASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~~---------~~~vavK~~~~--------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 423 (635)
|.||++... +..||+|.++. ++.+|+++++++ +|+||++++++|..++..+++|||+++|+|
T Consensus 26 g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 105 (334)
T cd05100 26 GQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNL 105 (334)
T ss_pred CcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcH
Confidence 889998741 23689998764 245789999999 899999999999999999999999999999
Q ss_pred chhhcccC--------------CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 424 SVWINDKG--------------GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 424 ~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
.+++.... ...+++.+++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 106 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~~~~~~kL~Dfg~~~ 182 (334)
T cd05100 106 REYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVTEDNVMKIADFGLAR 182 (334)
T ss_pred HHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCcccce
Confidence 99985421 23488999999999999999999985 49999999999999999999999999987
Q ss_pred cccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCch
Q 042486 490 PAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGE 568 (635)
Q Consensus 490 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 568 (635)
........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||.....+. ....
T Consensus 183 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~----------- 248 (334)
T cd05100 183 DVHNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--LFKL----------- 248 (334)
T ss_pred eccccccc-ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--HHHH-----------
Confidence 65432211 11122334567999999998889999999999999999998 777764322111 1111
Q ss_pred hhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 569 ESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 569 ~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
+.. ......+...+..+.+++.+||+.+|++||++.|+++.|+++...+
T Consensus 249 -----~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 249 -----LKE-GHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred -----HHc-CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 100 0111122233456889999999999999999999999999998544
No 230
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.6e-32 Score=278.62 Aligned_cols=223 Identities=20% Similarity=0.322 Sum_probs=172.0
Q ss_pred ceEEEeeeC--------------CcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccC
Q 042486 362 GSVYRGKIG--------------GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVN 420 (635)
Q Consensus 362 g~Vy~g~~~--------------~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 420 (635)
|.||+|+.. ...|++|.+.. .+.+|+.++++++||||+++++++..+...++||||+++
T Consensus 9 ~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 88 (262)
T cd05077 9 TQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEF 88 (262)
T ss_pred ceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccC
Confidence 899999852 12588898753 245678899999999999999999998899999999999
Q ss_pred CCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCc-------EEEeeecCcccccc
Q 042486 421 GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR-------AKIANFALARPAER 493 (635)
Q Consensus 421 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~-------~kl~Dfg~a~~~~~ 493 (635)
|+|..++.... ..+++..++.++.|++.||+|||+. +++||||||+|||++.++. ++++|||++.....
T Consensus 89 ~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~ 164 (262)
T cd05077 89 GPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS 164 (262)
T ss_pred CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC
Confidence 99998886543 3389999999999999999999984 4999999999999987654 89999999865432
Q ss_pred cCCceeeecccccCCCccCccccc-cCCCCcccchhhHHHHHHHHH-hCCCCCCCCcchhhHHHHhhhcccccCCchhhh
Q 042486 494 QEGEFALTSHIVGTKGYMAPEYLE-NGLVSTKLDVYAFGVLMLEML-SGKEAPALYSEENMLLVDVLNPVLHKEDGEESL 571 (635)
Q Consensus 494 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~SlGvvl~ell-tG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l 571 (635)
. ....++..|+|||.+. +..++.++||||||+++|||+ +|+.|+........ .
T Consensus 165 ~-------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~---------------- 219 (262)
T cd05077 165 R-------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK--E---------------- 219 (262)
T ss_pred c-------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH--H----------------
Confidence 1 1245778899999886 466899999999999999998 46666542211110 0
Q ss_pred hhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 572 RHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 572 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
.+...... ........+.+|+.+||+.||.+||++.+|++.|
T Consensus 220 -~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 220 -RFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred -HHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00000000 0111234588999999999999999999999876
No 231
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=6.6e-33 Score=304.86 Aligned_cols=258 Identities=21% Similarity=0.316 Sum_probs=184.8
Q ss_pred HHHHHhhcCCCCCCccc----ceEEEeee--CCcEEEEEEecc------ChHHHHHHHhhhccC------CcccEEEEEe
Q 042486 345 EELQAATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG------DASDQIKLLNKINHS------SLIRLLGICF 406 (635)
Q Consensus 345 ~el~~at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~------~~~~E~~~l~~l~h~------nIv~l~~~~~ 406 (635)
+++...+++|.....|| |+||++.. .++.||||+++. +...|++++++++|. +++++++++.
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34445566777666676 89999987 678999999854 245688888888654 4888888887
Q ss_pred cC-CeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC-------
Q 042486 407 NG-GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF------- 478 (635)
Q Consensus 407 ~~-~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~------- 478 (635)
.+ +..|+|||++ +++|.+++.+.. .+++..+..|+.||+.||.|||+. .+|+||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~ 276 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVT 276 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCccccccc
Confidence 54 5689999987 778988886543 389999999999999999999972 3499999999999998665
Q ss_pred ---------cEEEeeecCcccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcc
Q 042486 479 ---------RAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSE 549 (635)
Q Consensus 479 ---------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~ 549 (635)
.+||+|||.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.
T Consensus 277 ~~~~~~~~~~vkl~DfG~~~~~~~~------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~ 350 (467)
T PTZ00284 277 NRALPPDPCRVRICDLGGCCDERHS------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN 350 (467)
T ss_pred ccccCCCCceEEECCCCccccCccc------cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 4999999987643221 2335799999999999999999999999999999999999999865433
Q ss_pred hhhHHHHhhhcccccCC-------chhhhhhhcCC------cCC-----------CCCChHHHHHHHHHHHHhhhcCCCC
Q 042486 550 ENMLLVDVLNPVLHKED-------GEESLRHLMDP------SMQ-----------GNYPPVTAILVIRLIESCLKKDPSG 605 (635)
Q Consensus 550 ~~~~l~~~~~~~~~~~~-------~~~~l~~~~d~------~~~-----------~~~~~~~~~~l~~li~~cl~~dP~~ 605 (635)
.+. ...+...+.... .......+.+. ... ..........+.+||.+||+.||++
T Consensus 351 ~~~--~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 351 LEH--LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred HHH--HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 211 111111100000 00000000000 000 0000012345789999999999999
Q ss_pred CCCHHHHHHH
Q 042486 606 RPAMDKIAQS 615 (635)
Q Consensus 606 RPs~~evl~~ 615 (635)
|||++|+++|
T Consensus 429 R~ta~e~L~H 438 (467)
T PTZ00284 429 RLNARQMTTH 438 (467)
T ss_pred CCCHHHHhcC
Confidence 9999999986
No 232
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.1e-32 Score=281.35 Aligned_cols=227 Identities=25% Similarity=0.405 Sum_probs=183.6
Q ss_pred ceEEEeee--CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|+. +++.||+|.+..+ +.+|++++++++|+||+++++++.++...++|+||+++++|.+++...
T Consensus 15 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~- 93 (274)
T cd06609 15 GEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG- 93 (274)
T ss_pred eEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-
Confidence 89999987 6789999987532 457999999999999999999999999999999999999999999654
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
.+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+++....... ......++..|+
T Consensus 94 --~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~ 165 (274)
T cd06609 94 --KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS---KRNTFVGTPFWM 165 (274)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccccc---ccccccCCcccc
Confidence 4899999999999999999999854 99999999999999999999999999976653321 123356788999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHH
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l 591 (635)
|||.+.+..++.++||||||+++|+|++|+.|+...+.... . .. +.....+..... ..+..+
T Consensus 166 ~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-~-~~-------------~~~~~~~~~~~~---~~~~~~ 227 (274)
T cd06609 166 APEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-L-FL-------------IPKNNPPSLEGN---KFSKPF 227 (274)
T ss_pred ChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-H-HH-------------hhhcCCCCCccc---ccCHHH
Confidence 99999988899999999999999999999999854321110 0 00 000011111111 034458
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+++.+||..||++||++++++++
T Consensus 228 ~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 228 KDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHHHHHHhhCChhhCcCHHHHhhC
Confidence 899999999999999999999875
No 233
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.7e-32 Score=276.93 Aligned_cols=230 Identities=22% Similarity=0.339 Sum_probs=184.1
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||.++. +++.+++|.+.. ++.+|++++++++|+||+++++++.+.+..+++|||+++++|.+++...
T Consensus 14 g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~ 93 (256)
T cd08221 14 GEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQ 93 (256)
T ss_pred ceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhc
Confidence 66666655 788999998643 2568999999999999999999999999999999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
....+++.++..++.|++.+|.|||+.+ ++|+||+|+||++++++.+||+|||++........ ......++..|
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~---~~~~~~~~~~y 167 (256)
T cd08221 94 KGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS---MAETVVGTPYY 167 (256)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc---cccccCCCccc
Confidence 4455899999999999999999999855 99999999999999999999999999876543221 12335688999
Q ss_pred cCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHH
Q 042486 511 MAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590 (635)
Q Consensus 511 ~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~ 590 (635)
+|||.+.+..++.++||||||+++|||++|+.|+....... ....+...... ..+...+..
T Consensus 168 ~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------------------~~~~~~~~~~~-~~~~~~~~~ 228 (256)
T cd08221 168 MSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------------------LVVKIVQGNYT-PVVSVYSSE 228 (256)
T ss_pred cCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------------------HHHHHHcCCCC-CCccccCHH
Confidence 99999988888999999999999999999998875322111 11111111111 112233456
Q ss_pred HHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 591 VIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 591 l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
+.+++.+||..+|.+||+++|+++++
T Consensus 229 ~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 229 LISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHHHHHHHcccCcccCCCHHHHhhCc
Confidence 89999999999999999999999863
No 234
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-32 Score=293.00 Aligned_cols=240 Identities=25% Similarity=0.305 Sum_probs=177.2
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCC------eeEEEeecccCCCcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGG------NWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~------~~~lV~E~~~~gsL~ 424 (635)
|.||++.. ++..||||++... +.+|+.++++++|+||+++++++...+ ..|+||||+++ +|.
T Consensus 35 g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~ 113 (359)
T cd07876 35 GIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLC 113 (359)
T ss_pred EEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHH
Confidence 89999987 6889999998532 447899999999999999999986443 46999999965 566
Q ss_pred hhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccc
Q 042486 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504 (635)
Q Consensus 425 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 504 (635)
+.+.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... .....
T Consensus 114 ~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~----~~~~~ 182 (359)
T cd07876 114 QVIHM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF----MMTPY 182 (359)
T ss_pred HHHhc----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCccccccCc----cCCCC
Confidence 66532 2788899999999999999999855 9999999999999999999999999987543221 12335
Q ss_pred ccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc------hhhhhhhcCC-
Q 042486 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG------EESLRHLMDP- 577 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~------~~~l~~~~d~- 577 (635)
.+|..|+|||.+.+..++.++|||||||++|+|++|+.||...+... .+...... +..... ......+...
T Consensus 183 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 260 (359)
T cd07876 183 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID-QWNKVIEQ-LGTPSAEFMNRLQPTVRNYVENR 260 (359)
T ss_pred cccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh-cCCCcHHHHHHHHHHHHHHHhhC
Confidence 68999999999999899999999999999999999999987543221 11111110 000000 0000000000
Q ss_pred -cCC----------------CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 578 -SMQ----------------GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 578 -~~~----------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
... ..........+.+|+.+||+.||++|||+.|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 261 PQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred CCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 00111224558999999999999999999999987
No 235
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.4e-33 Score=283.56 Aligned_cols=239 Identities=23% Similarity=0.316 Sum_probs=184.7
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|+||++.. ++..+|+|.+.. .+.+|++++++++|+||+++++++...+..++||||+++++|.+++...+
T Consensus 19 g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~ 98 (284)
T cd06620 19 GSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGG 98 (284)
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhcc
Confidence 89999988 588999997643 24579999999999999999999999999999999999999999986543
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
.+++..+..++.+++.||.|||+. .+++||||+|+||++++++.++|+|||++....... .....++..|+
T Consensus 99 --~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-----~~~~~~~~~~~ 169 (284)
T cd06620 99 --PIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-----ADTFVGTSTYM 169 (284)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-----cCccccCcccC
Confidence 389999999999999999999972 349999999999999999999999999986442211 22356889999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHH
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l 591 (635)
|||++.+..++.++|||||||++|+|++|+.||.......... .......+.+..+.............+..+
T Consensus 170 aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd06620 170 SPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ-------DDPMGILDLLQQIVQEPPPRLPSSDFPEDL 242 (284)
T ss_pred CHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh-------hhhhHHHHHHHHHhhccCCCCCchhcCHHH
Confidence 9999988889999999999999999999999986433211000 000000011111111111111111244568
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
.+++.+||+.||.+||+++|++++.
T Consensus 243 ~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 243 RDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHHHhcCCcccCcCHHHHhcCc
Confidence 9999999999999999999999873
No 236
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.3e-32 Score=277.79 Aligned_cols=229 Identities=24% Similarity=0.366 Sum_probs=184.6
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.+|+++. +++.+|+|++.. ++.+|+.++++++|+||+++++++...+..++|+||+++++|.+++...
T Consensus 14 g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~ 93 (256)
T cd08218 14 GKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQ 93 (256)
T ss_pred eEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhc
Confidence 78998877 788999998742 3567999999999999999999999999999999999999999998665
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
....+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........ ......++..|
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~ 167 (256)
T cd08218 94 RGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE---LARTCIGTPYY 167 (256)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh---hhhhccCCccc
Confidence 4445899999999999999999999854 99999999999999999999999999875543221 12234578899
Q ss_pred cCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHH
Q 042486 511 MAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590 (635)
Q Consensus 511 ~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~ 590 (635)
+|||++.+...+.++|+||||+++++|++|+.|+...+... ....+..... ...+...+..
T Consensus 168 ~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------------------~~~~~~~~~~-~~~~~~~~~~ 228 (256)
T cd08218 168 LSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN------------------LVLKIIRGSY-PPVSSHYSYD 228 (256)
T ss_pred cCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH------------------HHHHHhcCCC-CCCcccCCHH
Confidence 99999998889999999999999999999999875322111 1111111110 1122334556
Q ss_pred HHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 591 VIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 591 l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+.+++.+||+.+|.+||++.||+++
T Consensus 229 ~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 229 LRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhhC
Confidence 8999999999999999999999975
No 237
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-34 Score=293.65 Aligned_cols=224 Identities=28% Similarity=0.420 Sum_probs=185.1
Q ss_pred ceEEEeee--CCcEEEEEEec----------cChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVY----------GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~----------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||.++. +...||||++. .|+.+|+.+|.+++|||++.+.|+|..+...|||||||- |+-.|++.-
T Consensus 40 GAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-GSAsDlleV 118 (948)
T KOG0577|consen 40 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDLLEV 118 (948)
T ss_pred ceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-ccHHHHHHH
Confidence 89999987 78899999984 257789999999999999999999999999999999995 588887743
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. +++.+..+..|+.+.+.||.|||+++ .||||||..|||+++.|.+||+|||.|....+. ..++||+.
T Consensus 119 hk-KplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA-------nsFvGTPy 187 (948)
T KOG0577|consen 119 HK-KPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAPA-------NSFVGTPY 187 (948)
T ss_pred Hh-ccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCch-------hcccCCcc
Confidence 32 45899999999999999999999976 999999999999999999999999999866543 34789999
Q ss_pred ccCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 510 YMAPEYLE---NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 510 y~aPE~~~---~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
|||||++. .|.|+-|+||||||++..||...++|....+.-. .++.. ..--.|.+ ...+
T Consensus 188 wMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-ALYHI--------------AQNesPtL---qs~e 249 (948)
T KOG0577|consen 188 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHI--------------AQNESPTL---QSNE 249 (948)
T ss_pred ccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-HHHHH--------------HhcCCCCC---CCch
Confidence 99999875 5889999999999999999999998864322111 11111 00111222 2456
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+..+.+++..||+.-|.+|||.+++++|
T Consensus 250 WS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 250 WSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred hHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 77889999999999999999999999876
No 238
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.8e-32 Score=277.76 Aligned_cols=238 Identities=24% Similarity=0.388 Sum_probs=190.7
Q ss_pred ceEEEeeeC--CcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKIG--GDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~~--~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++.. +..+|+|.+.. .+.+|++++++++|+||+++++.+.+++..++++||+++++|.+++.+
T Consensus 7 ~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 86 (262)
T cd05572 7 GRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD 86 (262)
T ss_pred eEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhh
Confidence 899999984 88999998753 245789999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....... ......++..
T Consensus 87 ~~--~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~ 157 (262)
T cd05572 87 RG--LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----KTWTFCGTPE 157 (262)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc----ccccccCCcC
Confidence 43 389999999999999999999984 49999999999999999999999999998664332 1223467889
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|++||.+.+..++.++|+||||+++|+|++|..|+.....+.. +....+.+......++...+.
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~ 221 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM----------------EIYNDILKGNGKLEFPNYIDK 221 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH----------------HHHHHHhccCCCCCCCcccCH
Confidence 9999999888889999999999999999999999864332111 111122211112233434466
Q ss_pred HHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHHhhccccc
Q 042486 590 LVIRLIESCLKKDPSGRPA-----MDKIAQSISRFLNASLAWE 627 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs-----~~evl~~L~~~~~~s~~w~ 627 (635)
.+.+++.+||+.||++||+ ++|++++ .++. +.+|+
T Consensus 222 ~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~--~~~~-~~~~~ 261 (262)
T cd05572 222 AAKDLIKQLLRRNPEERLGNLKGGIKDIKKH--KWFN-GFDWE 261 (262)
T ss_pred HHHHHHHHHccCChhhCcCCcccCHHHHhcC--hhhh-CCCCC
Confidence 7999999999999999999 7777764 4555 46775
No 239
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.2e-33 Score=281.08 Aligned_cols=231 Identities=24% Similarity=0.360 Sum_probs=180.3
Q ss_pred ceEEEeee--CCcEEEEEEeccC-------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD-------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~-------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||+++. +++.||+|.++.. +.+|+.++++++|+||+++++.+..++..++||||+++++|.+++...+
T Consensus 23 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~- 101 (267)
T cd06645 23 GDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG- 101 (267)
T ss_pred eEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcC-
Confidence 89999987 6889999987542 4568999999999999999999999999999999999999999986543
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
.+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .......|+..|+|
T Consensus 102 -~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~y~a 174 (267)
T cd06645 102 -PLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI---AKRKSFIGTPYWMA 174 (267)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc---cccccccCcccccC
Confidence 3899999999999999999999855 9999999999999999999999999987543221 11233568899999
Q ss_pred ccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 513 PEYLE---NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 513 PE~~~---~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
||.+. ...++.++|+|||||++|+|++|+.|+......... ....... ...+.... ....+.
T Consensus 175 PE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~-~~~~~~~------------~~~~~~~~--~~~~~~ 239 (267)
T cd06645 175 PEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMTKSN------------FQPPKLKD--KMKWSN 239 (267)
T ss_pred hhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH-HhhhccC------------CCCCcccc--cCCCCH
Confidence 99874 456889999999999999999999987532221110 0000000 00000000 011234
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+.+++.+||+.||++||++++++++
T Consensus 240 ~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 240 SFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHHHHHHccCCchhCcCHHHHhcC
Confidence 58899999999999999999999864
No 240
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2e-32 Score=280.86 Aligned_cols=246 Identities=23% Similarity=0.365 Sum_probs=182.1
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+++. +++.||+|++.. .+.+|++++++++|+|++++++++......++||||++++.|..++...
T Consensus 15 ~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~ 94 (286)
T cd07847 15 GVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNP 94 (286)
T ss_pred eEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCC
Confidence 89999988 588999998742 2457999999999999999999999999999999999998888877543
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........ ......++..|
T Consensus 95 ~--~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~ 166 (286)
T cd07847 95 R--GVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD---DYTDYVATRWY 166 (286)
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc---cccCccccccc
Confidence 3 3899999999999999999999854 99999999999999999999999999986543321 12234577889
Q ss_pred cCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhH--HHHhhhcccccC----CchhhhhhhcCCcCCCCC
Q 042486 511 MAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENML--LVDVLNPVLHKE----DGEESLRHLMDPSMQGNY 583 (635)
Q Consensus 511 ~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~--l~~~~~~~~~~~----~~~~~l~~~~d~~~~~~~ 583 (635)
+|||.+.+ ..++.++||||||+++|||++|+.||......+.. ............ ...........+......
T Consensus 167 ~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (286)
T cd07847 167 RAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETRE 246 (286)
T ss_pred CCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCccccc
Confidence 99999875 55789999999999999999999988644332211 111111110000 000000001111111000
Q ss_pred C-----hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 584 P-----PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 584 ~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+ ...+..+.+++.+||+.||++||++.|++.+
T Consensus 247 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 247 PLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0 1224568899999999999999999999864
No 241
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=9.5e-33 Score=281.15 Aligned_cols=242 Identities=25% Similarity=0.381 Sum_probs=184.1
Q ss_pred hcCCCCCCccc----ceEEEeee--CCcEEEEEEecc------ChHHHHHHHhhh-ccCCcccEEEEEecCC------ee
Q 042486 351 TDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG------DASDQIKLLNKI-NHSSLIRLLGICFNGG------NW 411 (635)
Q Consensus 351 t~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~------~~ 411 (635)
+++|.....++ |.||+|+. +++.+++|.+.. ++.+|+.+++++ +|+||+++++++.... ..
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 34454444444 78999998 578899998753 356799999999 7999999999997544 48
Q ss_pred EEEeecccCCCcchhhcccC--CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 412 YLVYENAVNGSLSVWINDKG--GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 412 ~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
++||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++.
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCccce
Confidence 99999999999999985432 345899999999999999999999855 9999999999999999999999999987
Q ss_pred cccccCCceeeecccccCCCccCcccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhccccc
Q 042486 490 PAERQEGEFALTSHIVGTKGYMAPEYLEN-----GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHK 564 (635)
Q Consensus 490 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~ 564 (635)
...... .......++..|+|||.+.. ..++.++||||||+++++|++|+.||....... .......
T Consensus 162 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~----- 232 (275)
T cd06608 162 QLDSTL---GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-ALFKIPR----- 232 (275)
T ss_pred ecccch---hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HHHHhhc-----
Confidence 543321 11233468889999998753 346789999999999999999999985322111 1111000
Q ss_pred CCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 565 EDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 565 ~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+......+...+..+.+++.+||..||++|||++|++++
T Consensus 233 -----------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 233 -----------NPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred -----------cCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0000111122345568999999999999999999999864
No 242
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8.6e-33 Score=283.55 Aligned_cols=245 Identities=25% Similarity=0.342 Sum_probs=181.5
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+++. ++..||||+++. .+.+|++++++++|+||+++++++.+++..++||||+. ++|.+++...
T Consensus 14 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~ 92 (284)
T cd07860 14 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS 92 (284)
T ss_pred eEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhC
Confidence 89999987 688999998853 35679999999999999999999999999999999995 6899988655
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
....+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||++........ ......++..|
T Consensus 93 ~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y 166 (284)
T cd07860 93 PLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR---TYTHEVVTLWY 166 (284)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc---ccccccccccc
Confidence 4455899999999999999999999854 99999999999999999999999999875533211 11223567889
Q ss_pred cCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc-----------hhhhhhhcCCc
Q 042486 511 MAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG-----------EESLRHLMDPS 578 (635)
Q Consensus 511 ~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-----------~~~l~~~~d~~ 578 (635)
+|||.+.+. .++.++||||||+++|||+||+.||...++.. ............... ...........
T Consensus 167 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (284)
T cd07860 167 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQD 245 (284)
T ss_pred cCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccC
Confidence 999988654 36889999999999999999999886443322 111111110000000 00000000000
Q ss_pred CCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 579 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
. .......+..+.+++.+||+.||++||+++|++++
T Consensus 246 ~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 246 F-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred H-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0 00011233457899999999999999999999865
No 243
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.5e-32 Score=277.91 Aligned_cols=237 Identities=22% Similarity=0.370 Sum_probs=174.4
Q ss_pred ceEEEeee----CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI----GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~----~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+|.. ....+|+|.+... +.+|+..++.++|+||+++++.+.+.+..++||||+++|+|.+++..
T Consensus 9 g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 88 (269)
T cd05042 9 GKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRS 88 (269)
T ss_pred ceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHh
Confidence 89999975 2347888877532 45788999999999999999999999999999999999999999965
Q ss_pred cCC---CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccccc
Q 042486 430 KGG---KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506 (635)
Q Consensus 430 ~~~---~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g 506 (635)
... ...++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++........ ........+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~ 164 (269)
T cd05042 89 NRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY-YITKDCHAV 164 (269)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchh-eeccCCCCC
Confidence 322 23567888999999999999999854 99999999999999999999999999865432211 111122345
Q ss_pred CCCccCcccccc-------CCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCc
Q 042486 507 TKGYMAPEYLEN-------GLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578 (635)
Q Consensus 507 t~~y~aPE~~~~-------~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~ 578 (635)
+..|+|||++.. ..++.++||||||+++|||++ |..|+....+.. .+....... ...+.++.
T Consensus 165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~---------~~~~~~~~ 234 (269)
T cd05042 165 PLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQ---------DIKLPKPQ 234 (269)
T ss_pred cccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhcc---------CccCCCCc
Confidence 678999998742 356889999999999999999 666664332211 111111100 00111111
Q ss_pred CCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 579 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
. +...+..+.+++..|+ .||++||+++||++.|+
T Consensus 235 ~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 235 L----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred c----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1 2233445778888998 59999999999998874
No 244
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.1e-32 Score=289.75 Aligned_cols=233 Identities=21% Similarity=0.245 Sum_probs=177.0
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||+|.+.. .+.+|+.++++++|+||+++++++.+++..|+||||+++|+|.+++.+
T Consensus 15 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~ 94 (331)
T cd05597 15 GEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSK 94 (331)
T ss_pred eEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHH
Confidence 89999987 688999999853 145788899999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++........ .......||+.
T Consensus 95 ~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~gt~~ 168 (331)
T cd05597 95 FE-DRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT--VQSNVAVGTPD 168 (331)
T ss_pred hc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCCC--ccccceecccc
Confidence 33 23899999999999999999999854 99999999999999999999999999875433221 11222468999
Q ss_pred ccCcccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 510 YMAPEYLEN-----GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 510 y~aPE~~~~-----~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
|+|||++.. ..++.++|||||||++|||++|+.||........ .... ..... . ..+. ...
T Consensus 169 y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~-~~~i----~~~~~-------~--~~~~-~~~ 233 (331)
T cd05597 169 YISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKI----MNHKE-------H--FQFP-PDV 233 (331)
T ss_pred ccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH-HHHH----HcCCC-------c--ccCC-Ccc
Confidence 999999863 4578899999999999999999999854322110 0000 00000 0 0000 001
Q ss_pred hHHHHHHHHHHHHhhhcCCC--CCCCHHHHHHH
Q 042486 585 PVTAILVIRLIESCLKKDPS--GRPAMDKIAQS 615 (635)
Q Consensus 585 ~~~~~~l~~li~~cl~~dP~--~RPs~~evl~~ 615 (635)
...+..+.+++.+|+..+++ .||++++++++
T Consensus 234 ~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 234 TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 12345578889888865443 48899999988
No 245
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.1e-32 Score=279.63 Aligned_cols=231 Identities=23% Similarity=0.387 Sum_probs=184.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||++.. +++.+|+|.+... +.+|++++++++|+||+++++.+..++..++++||+++++|.+++....
T Consensus 15 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~ 94 (265)
T cd06605 15 GVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQ 94 (265)
T ss_pred eEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHcc
Confidence 89999988 5889999987543 4578999999999999999999999999999999999999999996543
Q ss_pred CCCCCHHHHHHHHHHHHhhhccccc-CCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHS-FTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
..+++..+..++.|++.||.|||+ .+ ++|+||||+||++++++.++|+|||.+........ ....++..|
T Consensus 95 -~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~y 165 (265)
T cd06605 95 -GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA-----KTFVGTSSY 165 (265)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-----hcccCChhc
Confidence 348999999999999999999998 55 99999999999999999999999999875533211 115678899
Q ss_pred cCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH-HHH
Q 042486 511 MAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV-TAI 589 (635)
Q Consensus 511 ~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~-~~~ 589 (635)
+|||.+.+..++.++||||||+++|+|++|+.|+...........+ ....+...... ..+.. .+.
T Consensus 166 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~ 231 (265)
T cd06605 166 MAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFE-------------LLQYIVNEPPP-RLPSGKFSP 231 (265)
T ss_pred cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHH-------------HHHHHhcCCCC-CCChhhcCH
Confidence 9999999889999999999999999999999998543221111111 11111111111 11111 455
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+.++|.+||..||++||++.|++.+
T Consensus 232 ~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 232 DFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 68999999999999999999999865
No 246
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.6e-32 Score=281.42 Aligned_cols=230 Identities=24% Similarity=0.396 Sum_probs=179.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC-------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD-------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~-------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||+|+. ++..+++|.+... +.+|++++++++|+||+++++.+..++..++||||+++++|..++.+..
T Consensus 26 g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~- 104 (292)
T cd06644 26 GKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELD- 104 (292)
T ss_pred eEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhc-
Confidence 89999987 5789999998543 4568899999999999999999999999999999999999988875433
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
..+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.+||+|||++....... .......++..|+|
T Consensus 105 ~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~y~a 178 (292)
T cd06644 105 RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL---QRRDSFIGTPYWMA 178 (292)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccc---cccceecCCccccC
Confidence 34899999999999999999999854 9999999999999999999999999986533221 11223467889999
Q ss_pred ccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 513 PEYLE-----NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 513 PE~~~-----~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
||++. ...++.++|||||||++|||++|+.|+....... ........ ..+. ...+...
T Consensus 179 PE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~--------------~~~~--~~~~~~~ 241 (292)
T cd06644 179 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKS--------------EPPT--LSQPSKW 241 (292)
T ss_pred ceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-HHHHHhcC--------------CCcc--CCCCccc
Confidence 99884 3456889999999999999999999875432211 11111000 0000 0112233
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+..+.+++.+||+.||++||+++|++++
T Consensus 242 ~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 242 SMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 4568899999999999999999999875
No 247
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-33 Score=295.40 Aligned_cols=227 Identities=26% Similarity=0.416 Sum_probs=180.5
Q ss_pred ceEEEeee--CCcEEEEEEe------c-----cChHHHHHHHhhhccCCcccEEEEEecCCe--eEEEeecccCCCcchh
Q 042486 362 GSVYRGKI--GGDFVAIKKV------Y-----GDASDQIKLLNKINHSSLIRLLGICFNGGN--WYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~------~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~--~~lV~E~~~~gsL~~~ 426 (635)
-+||||.+ +|..||=-.+ + ..+..|+.+|+.|+|+||++++.++.+... .-+|.|.+..|+|..|
T Consensus 54 KtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y 133 (632)
T KOG0584|consen 54 KTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREY 133 (632)
T ss_pred eeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHH
Confidence 58999988 4545542111 1 246789999999999999999999997655 7899999999999999
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC-CcEEEeeecCcccccccCCceeeecccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
+.+.+. ++.+.+..|++||++||.|||++. ++|+|||||.+||||+.+ |.+||+|+|+|....... ..+..
T Consensus 134 ~kk~~~--vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-----aksvI 205 (632)
T KOG0584|consen 134 RKKHRR--VNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-----AKSVI 205 (632)
T ss_pred HHHhcc--CCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhccc-----cceec
Confidence 976654 889999999999999999999986 999999999999999765 899999999998765443 23478
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
|||.|||||... ..|.+..||||||++++||+|+..|+......-+.+..+.... ....+.++-
T Consensus 206 GTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi-----KP~sl~kV~---------- 269 (632)
T KOG0584|consen 206 GTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI-----KPAALSKVK---------- 269 (632)
T ss_pred cCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC-----CHHHhhccC----------
Confidence 999999999987 7799999999999999999999999753333222222222111 112222222
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..++.+||.+||.. .++|||+.|++++
T Consensus 270 --dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 270 --DPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred --CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 23489999999999 9999999999875
No 248
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.1e-32 Score=279.69 Aligned_cols=213 Identities=23% Similarity=0.338 Sum_probs=165.0
Q ss_pred EEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHH
Q 042486 373 FVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIAL 445 (635)
Q Consensus 373 ~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~ 445 (635)
.||+|.+.. .+.+|++++++++|+||++++++|.+++..++||||+++|+|..++.... ..+++..+..++.
T Consensus 46 ~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~ 124 (274)
T cd05076 46 RVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQ 124 (274)
T ss_pred eEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHH
Confidence 588998854 24567889999999999999999999999999999999999999986533 3489999999999
Q ss_pred HHHhhhcccccCCCCCeEeecccCCCEEECCCC-------cEEEeeecCcccccccCCceeeecccccCCCccCcccccc
Q 042486 446 DVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF-------RAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN 518 (635)
Q Consensus 446 ~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 518 (635)
|++.||+|||+. +++||||||+||+++.++ .+|++|||++...... ....++..|+|||.+.+
T Consensus 125 qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~-------~~~~~~~~~~aPe~~~~ 194 (274)
T cd05076 125 QLASALSYLEDK---NLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR-------EERVERIPWIAPECVPG 194 (274)
T ss_pred HHHHHHHHHHcC---CccCCCCCcccEEEeccCcccCccceeeecCCccccccccc-------cccccCCcccCchhhcC
Confidence 999999999984 599999999999997643 4899999987643221 12356788999998865
Q ss_pred -CCCCcccchhhHHHHHHHHH-hCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHH
Q 042486 519 -GLVSTKLDVYAFGVLMLEML-SGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIE 596 (635)
Q Consensus 519 -~~~s~ksDV~SlGvvl~ell-tG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~ 596 (635)
..++.++||||||+++|||+ +|+.|+........ ...... ... .+......+.+++.
T Consensus 195 ~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~--~~~~~~---------------~~~----~~~~~~~~~~~li~ 253 (274)
T cd05076 195 GNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK--ERFYEK---------------KHR----LPEPSCKELATLIS 253 (274)
T ss_pred CCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH--HHHHHh---------------ccC----CCCCCChHHHHHHH
Confidence 56899999999999999995 68877653222111 000000 000 11112235889999
Q ss_pred HhhhcCCCCCCCHHHHHHHHH
Q 042486 597 SCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 597 ~cl~~dP~~RPs~~evl~~L~ 617 (635)
+||+.+|++||++.++++.|+
T Consensus 254 ~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 254 QCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHcccChhhCcCHHHHHHhhC
Confidence 999999999999999999873
No 249
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.3e-33 Score=293.52 Aligned_cols=227 Identities=19% Similarity=0.270 Sum_probs=174.6
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhh---ccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKI---NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+++. +++.||||.+... ...|..++.+. +||||+++++.+.+.+..|+||||+++|+|.++
T Consensus 7 g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 86 (330)
T cd05586 7 GQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWH 86 (330)
T ss_pred eEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHH
Confidence 89999987 6889999998532 12355566555 699999999999999999999999999999999
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g 506 (635)
+.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....... .......|
T Consensus 87 l~~~~--~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~g 158 (330)
T cd05586 87 LQKEG--RFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN---KTTNTFCG 158 (330)
T ss_pred HHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC---CCccCccC
Confidence 86543 3899999999999999999999854 9999999999999999999999999987532221 11234579
Q ss_pred CCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 507 TKGYMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 507 t~~y~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
|..|+|||.+.+. .++.++|||||||++|||++|+.||....... ... .+....... ...
T Consensus 159 t~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~--~~~----------------~i~~~~~~~-~~~ 219 (330)
T cd05586 159 TTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ--MYR----------------NIAFGKVRF-PKN 219 (330)
T ss_pred CccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH--HHH----------------HHHcCCCCC-CCc
Confidence 9999999998754 47899999999999999999999985432211 111 110000000 011
Q ss_pred HHHHHHHHHHHHhhhcCCCCCC----CHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRP----AMDKIAQS 615 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RP----s~~evl~~ 615 (635)
..+..+.+++.+||+.||++|| ++.|++++
T Consensus 220 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 220 VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 2344578999999999999998 46666554
No 250
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.2e-32 Score=282.65 Aligned_cols=230 Identities=23% Similarity=0.443 Sum_probs=173.7
Q ss_pred cEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC---------CCC
Q 042486 372 DFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG---------GKF 434 (635)
Q Consensus 372 ~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~---------~~~ 434 (635)
..+|+|.++.. +.+|++++++++|+||+++++++..++..++||||+++++|.+++.... ...
T Consensus 47 ~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 126 (296)
T cd05095 47 VLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVT 126 (296)
T ss_pred eEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccc
Confidence 46899988642 4579999999999999999999999999999999999999999985432 124
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||+++....... ........++..|++||
T Consensus 127 ~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe 202 (296)
T cd05095 127 ISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDY-YRIQGRAVLPIRWMSWE 202 (296)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheEEEcCCCCEEeccCcccccccCCcc-eeccCcCcCccccCCHH
Confidence 778899999999999999999855 99999999999999999999999999875533211 11122234467899999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHh--CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLS--GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~ellt--G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
....+.++.++|||||||++|||++ |..|+....... ........+.... .......+...+..+.
T Consensus 203 ~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 270 (296)
T cd05095 203 SILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ--VIENTGEFFRDQG----------RQVYLPKPALCPDSLY 270 (296)
T ss_pred HHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH--HHHHHHHHHhhcc----------ccccCCCCCCCCHHHH
Confidence 9888889999999999999999998 556664322211 1111111110000 0000011222345689
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
+++.+||+.||++||++.||.+.|+
T Consensus 271 ~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 271 KLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHcCCCcccCCCHHHHHHHHh
Confidence 9999999999999999999999886
No 251
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.9e-32 Score=278.28 Aligned_cols=234 Identities=25% Similarity=0.398 Sum_probs=184.5
Q ss_pred ceEEEeee--CCcEEEEEEecc-------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+++. ++..+|+|.+.. ++.+|++++++++|+||+++++++.+.+..++||||+++++|.++
T Consensus 14 ~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~ 93 (268)
T cd06630 14 SSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHL 93 (268)
T ss_pred eEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHH
Confidence 89999986 788999998853 245799999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC-cEEEeeecCcccccccCCc-eeeeccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF-RAKIANFALARPAERQEGE-FALTSHI 504 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~-~~~~~~~ 504 (635)
+.+.. .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++ .+||+|||.+......... .......
T Consensus 94 l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 168 (268)
T cd06630 94 LSKYG--AFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQL 168 (268)
T ss_pred HHHhC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCcccccc
Confidence 96543 4899999999999999999999854 99999999999998775 5999999998765432111 1112234
Q ss_pred ccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
.++..|+|||.+.+..++.++||||+|+++++|++|+.|+........ .....+..........+
T Consensus 169 ~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 233 (268)
T cd06630 169 LGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH---------------LALIFKIASATTAPSIP 233 (268)
T ss_pred ccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch---------------HHHHHHHhccCCCCCCc
Confidence 678899999999888889999999999999999999998753221110 00111111111122334
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 585 PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 585 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+..+.+++.+||..+|.+||++.|++++
T Consensus 234 ~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 234 EHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred hhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 4556678999999999999999999999864
No 252
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.1e-32 Score=292.57 Aligned_cols=251 Identities=25% Similarity=0.282 Sum_probs=182.2
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecC------Ce
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNG------GN 410 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~------~~ 410 (635)
++|.....|| |.||++.. .++.||||++... +.+|+.+++.++|+||+++++++... ..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence 3444444444 89999986 6889999998642 34689999999999999999988643 34
Q ss_pred eEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccc
Q 042486 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490 (635)
Q Consensus 411 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 490 (635)
.++||||+++ +|.+++.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 97 VYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred eEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCccccc
Confidence 6999999965 67666643 2788999999999999999999854 99999999999999999999999999975
Q ss_pred ccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccC-----
Q 042486 491 AERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE----- 565 (635)
Q Consensus 491 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~----- 565 (635)
..... ......+|..|+|||.+.+..++.++|||||||++|||++|+.||...+... .....+.......
T Consensus 169 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 169 AGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred CCCcc----ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 43321 1233568999999999998889999999999999999999999986533221 1111111000000
Q ss_pred CchhhhhhhcC----------C-----c-C--CCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 566 DGEESLRHLMD----------P-----S-M--QGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 566 ~~~~~l~~~~d----------~-----~-~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
........+.+ + . . ....+......+.+++.+||+.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000000000 0 0 0 001112234568999999999999999999999987
No 253
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.1e-32 Score=289.78 Aligned_cols=230 Identities=21% Similarity=0.232 Sum_probs=178.0
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.+|+|.+.. .+.+|+.++..++|+||+++++.+.+++..++||||+++|+|.+++.+
T Consensus 15 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~ 94 (332)
T cd05623 15 GEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSK 94 (332)
T ss_pred eEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHH
Confidence 89999988 577899998853 145788899999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++........ .......||+.
T Consensus 95 ~~-~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~--~~~~~~~gt~~ 168 (332)
T cd05623 95 FE-DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT--VQSSVAVGTPD 168 (332)
T ss_pred hc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCCc--ceecccccCcc
Confidence 33 23899999999999999999999855 99999999999999999999999999875432211 12233579999
Q ss_pred ccCccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCC---
Q 042486 510 YMAPEYLE-----NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQG--- 581 (635)
Q Consensus 510 y~aPE~~~-----~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~--- 581 (635)
|+|||++. ...++.++|||||||++|||++|+.||...+... . ...+.......
T Consensus 169 y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~-~-----------------~~~i~~~~~~~~~p 230 (332)
T cd05623 169 YISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-T-----------------YGKIMNHKERFQFP 230 (332)
T ss_pred ccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH-H-----------------HHHHhCCCccccCC
Confidence 99999986 3467899999999999999999999986432211 1 11111110000
Q ss_pred CCChHHHHHHHHHHHHhhhcCCCC--CCCHHHHHHH
Q 042486 582 NYPPVTAILVIRLIESCLKKDPSG--RPAMDKIAQS 615 (635)
Q Consensus 582 ~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 615 (635)
......+..+.+++.+|+..++++ |++++|++++
T Consensus 231 ~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 231 AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 111223456889999988665444 7899999888
No 254
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.6e-32 Score=276.67 Aligned_cols=232 Identities=22% Similarity=0.381 Sum_probs=181.5
Q ss_pred ceEEEeeeC---CcEEEEEEecc-----------------ChHHHHHHHhh-hccCCcccEEEEEecCCeeEEEeecccC
Q 042486 362 GSVYRGKIG---GDFVAIKKVYG-----------------DASDQIKLLNK-INHSSLIRLLGICFNGGNWYLVYENAVN 420 (635)
Q Consensus 362 g~Vy~g~~~---~~~vavK~~~~-----------------~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 420 (635)
|.||+|... ++.+|+|.+.. ++.+|+.++.+ ++|+||+++++++.+++..+++|||+++
T Consensus 14 ~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (269)
T cd08528 14 GCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEG 93 (269)
T ss_pred ceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCC
Confidence 899999983 57899998742 13457777765 7999999999999999999999999999
Q ss_pred CCcchhhcc--cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCce
Q 042486 421 GSLSVWIND--KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF 498 (635)
Q Consensus 421 gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 498 (635)
++|.+++.. .....+++..++.++.|++.||.|||+ ..+++|+||+|+||+++.++.+||+|||.+.......
T Consensus 94 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--- 168 (269)
T cd08528 94 APLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES--- 168 (269)
T ss_pred CcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecccceeeccccc---
Confidence 999998843 223458999999999999999999996 2459999999999999999999999999997654332
Q ss_pred eeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCc
Q 042486 499 ALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578 (635)
Q Consensus 499 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~ 578 (635)
......++..|+|||.+.++.++.++||||||+++|||++|+.|+....... .. ..+.+..
T Consensus 169 -~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~-~~-----------------~~~~~~~ 229 (269)
T cd08528 169 -KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS-LA-----------------TKIVEAV 229 (269)
T ss_pred -ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH-HH-----------------HHHhhcc
Confidence 1233568889999999998889999999999999999999998875322111 00 0111111
Q ss_pred CCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 579 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.........+..+.+++.+||+.||++||++.|+..+++
T Consensus 230 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 YEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 100011123456899999999999999999999999875
No 255
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-33 Score=293.68 Aligned_cols=229 Identities=26% Similarity=0.385 Sum_probs=187.1
Q ss_pred ceEEEeee--CCcEEEEEEeccC-------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD-------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~-------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|+||.|++ +...+|||.+... ..+|+.+.++++|.|||+++|.|..++.+-+.||-++||+|.++|+..=
T Consensus 589 G~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskW- 667 (1226)
T KOG4279|consen 589 GTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKW- 667 (1226)
T ss_pred eEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhcc-
Confidence 89999998 5667899988653 4579999999999999999999999999999999999999999996542
Q ss_pred CCC--CHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEEC-CCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 433 KFL--DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD-TDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 433 ~~l--~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.++ .+..+-.+.+||++||.|||+.. |||||||-+|+|++ -.|.+||+|||-++..... ...+..+-||..
T Consensus 668 GPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi---nP~TETFTGTLQ 741 (1226)
T KOG4279|consen 668 GPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI---NPCTETFTGTLQ 741 (1226)
T ss_pred CCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccC---Cccccccccchh
Confidence 235 67778888999999999999854 99999999999995 4689999999998865433 245667889999
Q ss_pred ccCccccccC--CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 510 YMAPEYLENG--LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 510 y~aPE~~~~~--~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
|||||++..+ .|..++|||||||++.||.||++||......... .-++-.-+.....|.+.
T Consensus 742 YMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA-----------------MFkVGmyKvHP~iPeel 804 (1226)
T KOG4279|consen 742 YMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA-----------------MFKVGMYKVHPPIPEEL 804 (1226)
T ss_pred hhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-----------------hhhhcceecCCCCcHHH
Confidence 9999999864 5889999999999999999999998532221100 00000112234667888
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQ 614 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~ 614 (635)
+.+...+|.+|+.+||.+||++.+++.
T Consensus 805 saeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 888999999999999999999999875
No 256
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3e-32 Score=277.70 Aligned_cols=234 Identities=23% Similarity=0.380 Sum_probs=182.0
Q ss_pred ceEEEeee--CCcEEEEEEecc-----------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-----------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGS 422 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-----------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gs 422 (635)
|.||+|.. +++.+|+|.++. .+.+|+.++++++|+|++++++++...+..++||||+++++
T Consensus 15 ~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 94 (272)
T cd06629 15 GRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGS 94 (272)
T ss_pred eEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCc
Confidence 89999976 688999998742 24568999999999999999999999999999999999999
Q ss_pred cchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeec
Q 042486 423 LSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502 (635)
Q Consensus 423 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 502 (635)
|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||+++........ ....
T Consensus 95 L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~ 168 (272)
T cd06629 95 IGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKSDDIYDN-DQNM 168 (272)
T ss_pred HHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccccccccccccc-cccc
Confidence 999996653 489999999999999999999985 4999999999999999999999999998754332111 1123
Q ss_pred ccccCCCccCccccccCC--CCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCC
Q 042486 503 HIVGTKGYMAPEYLENGL--VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQ 580 (635)
Q Consensus 503 ~~~gt~~y~aPE~~~~~~--~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~ 580 (635)
...++..|+|||.+.... ++.++|+||||+++|||++|..|+....... ...+.... ...+...
T Consensus 169 ~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~-------------~~~~~~~ 234 (272)
T cd06629 169 SMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-AMFKLGNK-------------RSAPPIP 234 (272)
T ss_pred cccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH-HHHHhhcc-------------ccCCcCC
Confidence 346788999999987654 7899999999999999999999875322111 11111000 0001111
Q ss_pred CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 581 GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 581 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.......+..+.+++.+||..||.+||++++++++
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 235 PDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 11112234568999999999999999999999875
No 257
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.5e-32 Score=281.18 Aligned_cols=230 Identities=24% Similarity=0.394 Sum_probs=181.7
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||+++. ++..+|+|.... ++.+|++++++++|+||+++++.+..++..++||||+++++|.+++....
T Consensus 19 ~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~- 97 (280)
T cd06611 19 GKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELE- 97 (280)
T ss_pred ceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhc-
Confidence 89999988 578999998753 25579999999999999999999999999999999999999999986543
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........ ......++..|+|
T Consensus 98 ~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~~ 171 (280)
T cd06611 98 RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ---KRDTFIGTPYWMA 171 (280)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhccccc---ccceeecchhhcC
Confidence 34899999999999999999999854 99999999999999999999999998865432211 1223468889999
Q ss_pred ccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 513 PEYLE-----NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 513 PE~~~-----~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
||.+. ...++.++|+||||+++|||++|+.|+...+.... ...... ...+. ...+...
T Consensus 172 PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~--------------~~~~~--~~~~~~~ 234 (280)
T cd06611 172 PEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV-LLKILK--------------SEPPT--LDQPSKW 234 (280)
T ss_pred HHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH-HHHHhc--------------CCCCC--cCCcccC
Confidence 99874 34467899999999999999999999754322111 111100 00000 1112233
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+..+.+++.+||+.||.+||++.+++++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 235 SSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 4568899999999999999999999887
No 258
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=9.2e-33 Score=279.02 Aligned_cols=231 Identities=29% Similarity=0.464 Sum_probs=182.4
Q ss_pred ceEEEeee--CCcEEEEEEeccCh---------HHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGDA---------SDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~~---------~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|+||+++. +++.+|+|.+.... .+|+.++++++|+||+++++++.+.+..++||||+++++|.+++...
T Consensus 13 g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~ 92 (260)
T PF00069_consen 13 GTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKN 92 (260)
T ss_dssp EEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHH
T ss_pred EEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccccccccccccc
Confidence 89999998 56689999986531 24889999999999999999999999999999999999999999733
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
..+++..+..++.|+++||.+||+.+ ++|+||||+||++++++.++|+|||.+...... ........++..|
T Consensus 93 --~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~---~~~~~~~~~~~~y 164 (260)
T PF00069_consen 93 --KPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSEN---NENFNPFVGTPEY 164 (260)
T ss_dssp --SSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTST---TSEBSSSSSSGGG
T ss_pred --cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc---ccccccccccccc
Confidence 23899999999999999999999955 999999999999999999999999998753111 1223446788999
Q ss_pred cCccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchh--hHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 511 MAPEYLE-NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN--MLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 511 ~aPE~~~-~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
+|||.+. +...+.++||||||+++|+|++|+.|+....... ............ . .. ......
T Consensus 165 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~--------~~--~~~~~~ 229 (260)
T PF00069_consen 165 MAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLP-----S--------SS--QQSREK 229 (260)
T ss_dssp SCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHH-----H--------HT--TSHTTS
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccc-----c--------cc--cccchh
Confidence 9999998 8889999999999999999999999986541111 111111100000 0 00 000011
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+.+++.+||+.||++||++.+++++
T Consensus 230 ~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 230 SEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred HHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2569999999999999999999999864
No 259
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4e-32 Score=273.85 Aligned_cols=231 Identities=27% Similarity=0.483 Sum_probs=182.8
Q ss_pred ceEEEeeeCC------cEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKIGG------DFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~~~------~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+++..+ ..||+|.++.. +.+|++++++++|+||+++++++.+.+..+++|||+++++|.+++
T Consensus 13 g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~ 92 (258)
T smart00219 13 GEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYL 92 (258)
T ss_pred cceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHH
Confidence 8999999843 78999998643 446899999999999999999999999999999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.......+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......... ......++
T Consensus 93 ~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~ 167 (258)
T smart00219 93 RKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY--KKKGGKLP 167 (258)
T ss_pred HhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccccccc--ccccCCCc
Confidence 6544333899999999999999999999854 999999999999999999999999999766543211 11123367
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
..|+|||.+.+..++.++||||||+++++|++ |+.|+...... ....... ... ....+..
T Consensus 168 ~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~--~~~~~~~----------------~~~-~~~~~~~ 228 (258)
T smart00219 168 IRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE--EVLEYLK----------------KGY-RLPKPEN 228 (258)
T ss_pred ccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHh----------------cCC-CCCCCCc
Confidence 89999999988889999999999999999998 66665432211 1111110 000 0111222
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
.+..+.+++.+||..||++|||+.|+++.|
T Consensus 229 ~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 229 CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 455689999999999999999999998764
No 260
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-33 Score=291.66 Aligned_cols=233 Identities=25% Similarity=0.376 Sum_probs=197.6
Q ss_pred ceEEEeee---CCc--EEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI---GGD--FVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~---~~~--~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.|++|.| +|+ .||||.++. +|.+|+.+|.+|+|+|+++|+|+..+ ....||||+++.|+|.+.|+
T Consensus 124 gvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLr 202 (1039)
T KOG0199|consen 124 GVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLR 202 (1039)
T ss_pred eeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHh
Confidence 89999999 343 689999875 57899999999999999999999987 67899999999999999998
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
+.....|-......++.|||.||.||.. +++|||||..+|+++-....+||+|||+.+.....+..+.+.....-..
T Consensus 203 ka~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPf 279 (1039)
T KOG0199|consen 203 KAKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPF 279 (1039)
T ss_pred hccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcc
Confidence 7555568888889999999999999998 4499999999999999999999999999999888777766666666777
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhC-CCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG-KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
.|.|||.+....++.++|||+|||++|||+|+ ..||..... ..+-+.+|.+.+-..|..+
T Consensus 280 AWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-------------------~qIL~~iD~~erLpRPk~c 340 (1039)
T KOG0199|consen 280 AWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-------------------IQILKNIDAGERLPRPKYC 340 (1039)
T ss_pred cccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-------------------HHHHHhccccccCCCCCCC
Confidence 89999999999999999999999999999995 456643221 2222334444444567788
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
+..+.+++++||..+|++||++..|.+.+-
T Consensus 341 sedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 341 SEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred hHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 899999999999999999999999985443
No 261
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.1e-32 Score=289.57 Aligned_cols=230 Identities=21% Similarity=0.251 Sum_probs=177.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.||+|.+... +.+|..++.+++|+||+++++++.+++..|+||||+++|+|.+++..
T Consensus 15 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~ 94 (331)
T cd05624 15 GEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSK 94 (331)
T ss_pred eEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH
Confidence 89999987 6789999988531 45678889999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........ .......||+.
T Consensus 95 ~~-~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~~gt~~ 168 (331)
T cd05624 95 FE-DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT--VQSSVAVGTPD 168 (331)
T ss_pred hc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCCc--eeeccccCCcc
Confidence 33 23899999999999999999999854 99999999999999999999999999875543221 11233569999
Q ss_pred ccCcccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 510 YMAPEYLEN-----GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 510 y~aPE~~~~-----~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
|+|||++.+ +.++.++||||||+++|||++|+.||...+... ....++........+
T Consensus 169 y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------------------~~~~i~~~~~~~~~p 230 (331)
T cd05624 169 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------------------TYGKIMNHEERFQFP 230 (331)
T ss_pred cCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH------------------HHHHHHcCCCcccCC
Confidence 999999865 567889999999999999999999985432211 111111110000011
Q ss_pred ---hHHHHHHHHHHHHhhhcCCCC--CCCHHHHHHH
Q 042486 585 ---PVTAILVIRLIESCLKKDPSG--RPAMDKIAQS 615 (635)
Q Consensus 585 ---~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 615 (635)
...+..+.+++.+|+..++++ |+++++++++
T Consensus 231 ~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 231 SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 123456889999999866554 5688888776
No 262
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.6e-32 Score=282.10 Aligned_cols=244 Identities=28% Similarity=0.333 Sum_probs=181.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC------------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD------------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~------------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|.. +++.||||+++.. +.+|++++++++|+||+++++++.+++..++||||+ +++|.+++
T Consensus 14 ~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i 92 (298)
T cd07841 14 AVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVI 92 (298)
T ss_pred cEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHH
Confidence 89999987 6789999998643 246899999999999999999999999999999999 89999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.... ..+++..+..++.||++||.|||+.+ ++|+||+|+||+++.++.++|+|||+++....... ......++
T Consensus 93 ~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~ 165 (298)
T cd07841 93 KDKS-IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR---KMTHQVVT 165 (298)
T ss_pred hccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCCCc---cccccccc
Confidence 6544 34899999999999999999999855 99999999999999999999999999976543321 11223467
Q ss_pred CCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCch-----hhhhhhcCCcCCC
Q 042486 508 KGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE-----ESLRHLMDPSMQG 581 (635)
Q Consensus 508 ~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~-----~~l~~~~d~~~~~ 581 (635)
..|+|||.+.+ ..++.++||||||++++||++|..++....+.. .+...... +...... .............
T Consensus 166 ~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (298)
T cd07841 166 RWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEA-LGTPTEENWPGVTSLPDYVEFKPFP 243 (298)
T ss_pred eeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHH-cCCCchhhhhhcccccccccccccC
Confidence 78999998854 457899999999999999999976665333211 11111111 1000000 0000000000000
Q ss_pred C-----CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 582 N-----YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 582 ~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
. .....+..+.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 244 PTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred CcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0 112235668999999999999999999999985
No 263
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.3e-32 Score=291.03 Aligned_cols=240 Identities=26% Similarity=0.303 Sum_probs=177.9
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecC------CeeEEEeecccCCCcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNG------GNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~lV~E~~~~gsL~ 424 (635)
|.||++.. .++.||||++.. .+.+|+.+++.++|+||+++++++... ...|+||||+++ +|.
T Consensus 38 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~ 116 (364)
T cd07875 38 GIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLC 116 (364)
T ss_pred eEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-CHH
Confidence 89999987 688999999864 244789999999999999999987643 357999999965 677
Q ss_pred hhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccc
Q 042486 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504 (635)
Q Consensus 425 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 504 (635)
+++.. .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 117 ~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~----~~~~~ 185 (364)
T cd07875 117 QVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----MMTPY 185 (364)
T ss_pred HHHHh----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC----cccCC
Confidence 77643 278899999999999999999985 49999999999999999999999999997653321 12335
Q ss_pred ccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc------hhhhhhhcC--
Q 042486 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG------EESLRHLMD-- 576 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~------~~~l~~~~d-- 576 (635)
.+|..|+|||++.+..++.++|||||||++|||++|+.||...+... .....+.. +..... .........
T Consensus 186 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 263 (364)
T cd07875 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQ-LGTPCPEFMKKLQPTVRTYVENR 263 (364)
T ss_pred cccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh-cCCCCHHHHHhhhHHHHHHHhhC
Confidence 68999999999999899999999999999999999999986543321 11111110 000000 000000000
Q ss_pred ------------CcC----CCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 577 ------------PSM----QGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 577 ------------~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+.. ...........+.+|+.+||+.||++|||++|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred CCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000 001111123468899999999999999999999987
No 264
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-32 Score=286.44 Aligned_cols=228 Identities=27% Similarity=0.343 Sum_probs=190.9
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. +|+.+|+|.+.. ++.+|+.+|+++. ||||+.+.+.+.+....++|||++.||.|.+.+.
T Consensus 49 g~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~ 128 (382)
T KOG0032|consen 49 GVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIV 128 (382)
T ss_pred eEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHH
Confidence 89999987 689999998843 4568999999998 9999999999999999999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC----CCcEEEeeecCcccccccCCceeeeccc
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT----DFRAKIANFALARPAERQEGEFALTSHI 504 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 504 (635)
.. . +++.....++.|++.++.|||+.+ ++||||||+|+|+.. ++.+|++|||++...... ......
T Consensus 129 ~~--~-~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~----~~~~~~ 198 (382)
T KOG0032|consen 129 KK--H-YSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPG----ERLHTI 198 (382)
T ss_pred Hc--c-CCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCC----ceEeee
Confidence 65 2 899999999999999999999955 999999999999943 357999999999877652 234567
Q ss_pred ccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
+||+.|+|||++....++..+||||+|+++|.|++|..||....+..... ..... +........
T Consensus 199 ~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~i~~~---------------~~~f~~~~w 262 (382)
T KOG0032|consen 199 VGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-AILRG---------------DFDFTSEPW 262 (382)
T ss_pred cCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-HHHcC---------------CCCCCCCCc
Confidence 99999999999999999999999999999999999999986544332221 11111 011222333
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 585 PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 585 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+....+++..|+..||.+|+++.++++|
T Consensus 263 ~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 263 DDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred cccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 4456778999999999999999999999997
No 265
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.5e-32 Score=274.31 Aligned_cols=228 Identities=24% Similarity=0.361 Sum_probs=182.8
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||++.. +++.+|||.+.. .+.+|++++++++|+|++++++.+..++..++||||+++++|.+++...
T Consensus 14 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~ 93 (256)
T cd08220 14 GIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKR 93 (256)
T ss_pred eEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHh
Confidence 78999877 788999998743 2567999999999999999999999999999999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC-CcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
....+++..+..++.+++.+|.|||+. +++|+||+|+||+++.+ +.+||+|||++........ .....++..
T Consensus 94 ~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~ 166 (256)
T cd08220 94 CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK----AYTVVGTPC 166 (256)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc----ccccccCCc
Confidence 555689999999999999999999985 49999999999999755 5689999999986543221 123467889
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||.+.+..++.++||||||+++|+|++|+.|+...+..... ....... ....+...+.
T Consensus 167 y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~~~~ 227 (256)
T cd08220 167 YISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALV------------------LKIMSGT-FAPISDRYSP 227 (256)
T ss_pred ccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHH------------------HHHHhcC-CCCCCCCcCH
Confidence 99999999888899999999999999999999887543221110 0000000 0111223445
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+.+++.+||+.||++|||++|++.+
T Consensus 228 ~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 228 DLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhhC
Confidence 68999999999999999999999875
No 266
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-33 Score=298.08 Aligned_cols=238 Identities=26% Similarity=0.422 Sum_probs=196.9
Q ss_pred cceEEEeee--CC----cEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 361 KGSVYRGKI--GG----DFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 361 gg~Vy~g~~--~~----~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
.|+||||.| .+ -+||||.+.. ++.+|.-.|.+++|+|++||+|+|.... ..||++|++.|+|.+|
T Consensus 709 fGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDy 787 (1177)
T KOG1025|consen 709 FGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDY 787 (1177)
T ss_pred ceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHH
Confidence 399999998 33 4799998854 3568899999999999999999997665 7899999999999999
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g 506 (635)
++.++.. +..+..+.|..|||+||.|||+. +++||||..+|||+.+-..+|+.|||+++.......+.. .....-
T Consensus 788 vr~hr~~-igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~-~~~gK~ 862 (1177)
T KOG1025|consen 788 VREHRDN-IGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS-APGGKV 862 (1177)
T ss_pred HHHhhcc-ccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCccccccc-cccccc
Confidence 9765443 88899999999999999999984 499999999999999999999999999997766544322 222334
Q ss_pred CCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 507 t~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
.+.|||-|.+....++.++|||||||++||++| |..|++... .+.+..++....+-..|+
T Consensus 863 pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~-------------------~~eI~dlle~geRLsqPp 923 (1177)
T KOG1025|consen 863 PIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP-------------------AEEIPDLLEKGERLSQPP 923 (1177)
T ss_pred CcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC-------------------HHHhhHHHhccccCCCCC
Confidence 567999999999999999999999999999998 666654321 233344444444456788
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
.+...+..++.+||..|++.||+++++...+.++..+.
T Consensus 924 iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 924 ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred CccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 88888999999999999999999999999999987654
No 267
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.9e-32 Score=282.33 Aligned_cols=250 Identities=20% Similarity=0.276 Sum_probs=184.4
Q ss_pred ceEEEeeeCCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKIGGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
+.||+++.+++.||||++.. .+.+|++++++++|+||+++++++.+++..+++|||+++|+|.+++.....
T Consensus 16 v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~ 95 (314)
T cd08216 16 VHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFP 95 (314)
T ss_pred EEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcc
Confidence 45666666899999999753 245799999999999999999999999999999999999999999976544
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCC----ceeeecccccCC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG----EFALTSHIVGTK 508 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~~~~gt~ 508 (635)
..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||.+........ .........++.
T Consensus 96 ~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (314)
T cd08216 96 EGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNL 172 (314)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccc
Confidence 45899999999999999999999855 99999999999999999999999998865432211 011123345777
Q ss_pred CccCcccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhccc----ccCCchh---hhh----hhc
Q 042486 509 GYMAPEYLEN--GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVL----HKEDGEE---SLR----HLM 575 (635)
Q Consensus 509 ~y~aPE~~~~--~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~----~~~~~~~---~l~----~~~ 575 (635)
.|+|||.+.. ..++.++|+||||+++|||++|+.||.......... +...... ....... ... ...
T Consensus 173 ~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
T cd08216 173 PWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLL-EKVRGTVPCLLDKSTYPLYEDSMSQSRSSNE 251 (314)
T ss_pred cccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhccCccccccCchhhhcCCcCccccccc
Confidence 8999999875 357889999999999999999999986533222111 1111100 0000000 000 000
Q ss_pred CCc----CCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 576 DPS----MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 576 d~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
++. ............+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 252 HPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred ccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000 0112233445678999999999999999999999986
No 268
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.6e-32 Score=277.63 Aligned_cols=233 Identities=23% Similarity=0.443 Sum_probs=181.6
Q ss_pred ceEEEeee-------CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI-------GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~-------~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+++. +.+.|++|.+.. ++.+|++++++++|+||+++++++.+.+..++||||+++|+|.++
T Consensus 19 g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 98 (275)
T cd05046 19 GEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQF 98 (275)
T ss_pred eEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHH
Confidence 89999986 246799998743 356799999999999999999999988899999999999999999
Q ss_pred hcccCC-------CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCcee
Q 042486 427 INDKGG-------KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499 (635)
Q Consensus 427 l~~~~~-------~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 499 (635)
+..... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++....... ..
T Consensus 99 i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~--~~ 173 (275)
T cd05046 99 LRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE--YY 173 (275)
T ss_pred HHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEcccccccccCccc--cc
Confidence 965431 14899999999999999999999855 9999999999999999999999999986443221 11
Q ss_pred eecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCc
Q 042486 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578 (635)
Q Consensus 500 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~ 578 (635)
......++..|+|||.+.+...+.++||||||+++|+|++ |..||....... .... .....
T Consensus 174 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--~~~~----------------~~~~~ 235 (275)
T cd05046 174 KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--VLNR----------------LQAGK 235 (275)
T ss_pred ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--HHHH----------------HHcCC
Confidence 1223355678999999988888999999999999999999 666664322111 1111 00011
Q ss_pred CCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 579 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.....+...+..+.+++.+||+.||++||++.|+++.|.
T Consensus 236 ~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 236 LELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred cCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 111112233456899999999999999999999999885
No 269
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.3e-32 Score=273.91 Aligned_cols=232 Identities=22% Similarity=0.350 Sum_probs=184.1
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEec--CCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFN--GGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||++.. ++..+|+|.+.. .+.+|++++++++|+||+++++++.. +...+++|||+++++|.+++.
T Consensus 14 ~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~ 93 (265)
T cd08217 14 GTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQ 93 (265)
T ss_pred eEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHH
Confidence 89999987 678999998753 24468999999999999999998764 455799999999999999985
Q ss_pred cc--CCCCCCHHHHHHHHHHHHhhhcccccCC--CCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccc
Q 042486 429 DK--GGKFLDWAQRIQIALDVATGLNYLHSFT--NPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504 (635)
Q Consensus 429 ~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~--~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 504 (635)
.. ....+++..++.++.+++.||.|||..+ ..+++|+||+|+||+++.++.+||+|||++........ .....
T Consensus 94 ~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~---~~~~~ 170 (265)
T cd08217 94 KCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS---FAKTY 170 (265)
T ss_pred HHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcc---ccccc
Confidence 42 2345899999999999999999999432 36699999999999999999999999999986654321 12234
Q ss_pred ccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
.++..|+|||.+.+..++.++|+||||+++++|++|+.|+...+... ..+.. .. ......+
T Consensus 171 ~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~----------------~~-~~~~~~~ 231 (265)
T cd08217 171 VGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ--LASKI----------------KE-GKFRRIP 231 (265)
T ss_pred ccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH--HHHHH----------------hc-CCCCCCc
Confidence 68899999999998889999999999999999999999986433111 11111 11 1111223
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 585 PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 585 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+..+.+++.+||+.+|++||++++|+++
T Consensus 232 ~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 232 YRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 3445668999999999999999999999875
No 270
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5.1e-32 Score=279.05 Aligned_cols=256 Identities=21% Similarity=0.220 Sum_probs=183.1
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeec
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYEN 417 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 417 (635)
++|.....|| |.||+|.. ++..||+|.+.. .+.+|++++++++|+||+++++++..++..++||||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 4444444444 79999986 688999998753 245799999999999999999999999999999999
Q ss_pred ccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc
Q 042486 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE 497 (635)
Q Consensus 418 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 497 (635)
+. ++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 158 (291)
T cd07870 85 MH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ- 158 (291)
T ss_pred cc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCCC-
Confidence 95 67777764432 33788889999999999999999855 99999999999999999999999999875433211
Q ss_pred eeeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC-ch---hhhh
Q 042486 498 FALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED-GE---ESLR 572 (635)
Q Consensus 498 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~---~~l~ 572 (635)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.........+.+.......... .. ..+.
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 159 --TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred --CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 1122457889999999875 357889999999999999999999986544332222221110000000 00 0000
Q ss_pred hhcCCcCCCCCC---------hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 573 HLMDPSMQGNYP---------PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 573 ~~~d~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...........+ ......+.+++.+|++.||++|||++|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000000000 0113457899999999999999999998864
No 271
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.4e-32 Score=275.14 Aligned_cols=236 Identities=27% Similarity=0.406 Sum_probs=185.0
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|.. ++..+|+|++.. ++.+|++.++.++|+||+++++.+..++..++|+||+++++|.+++....
T Consensus 15 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~ 94 (267)
T cd06610 15 AVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSY 94 (267)
T ss_pred eEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhc
Confidence 89999987 678999998853 24578999999999999999999999999999999999999999996543
Q ss_pred C-CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCce-eeecccccCCC
Q 042486 432 G-KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF-ALTSHIVGTKG 509 (635)
Q Consensus 432 ~-~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~ 509 (635)
. ..+++.....++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......... .......++..
T Consensus 95 ~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (267)
T cd06610 95 PRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPC 171 (267)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChh
Confidence 2 45899999999999999999999854 9999999999999999999999999987654432211 12233468899
Q ss_pred ccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCC-ChHH
Q 042486 510 YMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNY-PPVT 587 (635)
Q Consensus 510 y~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~-~~~~ 587 (635)
|+|||++... ..+.++|+||||+++|||++|+.||....... ........ ..+...... ....
T Consensus 172 y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~~~~~ 236 (267)
T cd06610 172 WMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQN--------------DPPSLETGADYKKY 236 (267)
T ss_pred hcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcC--------------CCCCcCCccccccc
Confidence 9999998876 78999999999999999999999985432211 11111110 001111110 1234
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+..+.+++.+||+.||++||+++|++++
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 237 SKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred cHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 4568999999999999999999999875
No 272
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.5e-32 Score=273.63 Aligned_cols=227 Identities=28% Similarity=0.425 Sum_probs=182.3
Q ss_pred ceEEEeee--CCcEEEEEEecc------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|.. +++.|++|.+.. .+.+|++++++++|+||+++++++.+++..++++||+++++|.+++
T Consensus 14 ~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 93 (258)
T cd06632 14 GSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLL 93 (258)
T ss_pred ceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHH
Confidence 89999987 688999997642 2457899999999999999999999999999999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++....... ......++
T Consensus 94 ~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~----~~~~~~~~ 164 (258)
T cd06632 94 KKYG--SFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS----FAKSFKGS 164 (258)
T ss_pred HhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccccc----cccccCCC
Confidence 6543 3889999999999999999999855 9999999999999999999999999987653322 12335688
Q ss_pred CCccCccccccCC-CCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 508 KGYMAPEYLENGL-VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 508 ~~y~aPE~~~~~~-~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
..|++||.+.... ++.++|+||||+++|+|++|+.||....... ...... ........+..
T Consensus 165 ~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~-----------------~~~~~~~~~~~ 226 (258)
T cd06632 165 PYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA-AVFKIG-----------------RSKELPPIPDH 226 (258)
T ss_pred cceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH-HHHHHH-----------------hcccCCCcCCC
Confidence 8999999987766 8999999999999999999999975433111 110000 00001112233
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
....+.+++.+||+.+|.+||++++++.+
T Consensus 227 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 227 LSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 45568899999999999999999999864
No 273
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.1e-32 Score=278.97 Aligned_cols=231 Identities=23% Similarity=0.358 Sum_probs=182.4
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+++. ++..+|+|.++. .+.+|++++++++|+||+++++.+..++..++||||+++++|..++....
T Consensus 15 g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~ 94 (286)
T cd06622 15 GSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGV 94 (286)
T ss_pred eEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhcc
Confidence 89999998 588999998753 24579999999999999999999999999999999999999999886531
Q ss_pred -CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 432 -GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 432 -~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
...+++..+..++.+++.||.|||+. .+++|+||||+||+++.++.+||+|||++....... .....++..|
T Consensus 95 ~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~y 167 (286)
T cd06622 95 ATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL-----AKTNIGCQSY 167 (286)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-----cccCCCccCc
Confidence 23589999999999999999999962 359999999999999999999999999987543221 2234578899
Q ss_pred cCccccccC------CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 511 MAPEYLENG------LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 511 ~aPE~~~~~------~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
+|||.+.+. .++.++|+|||||++|+|++|+.||....... .. ..+..+.+.. ....+
T Consensus 168 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~-------------~~~~~~~~~~-~~~~~ 231 (286)
T cd06622 168 MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IF-------------AQLSAIVDGD-PPTLP 231 (286)
T ss_pred cCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HH-------------HHHHHHhhcC-CCCCC
Confidence 999998654 34889999999999999999999985322111 00 1111111111 11233
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 585 PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 585 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+..+.+++.+||+.+|++||++++++++
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 232 SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 4456668999999999999999999999985
No 274
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.5e-32 Score=278.06 Aligned_cols=225 Identities=19% Similarity=0.357 Sum_probs=174.3
Q ss_pred ceEEEeeeC---------CcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKIG---------GDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~~---------~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
|.||+|... ...+|+|.+.. .+.+|+.++++++|+|++++++++..++..++||||+++|+|.+
T Consensus 9 ~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~ 88 (258)
T cd05078 9 TKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDT 88 (258)
T ss_pred hhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHH
Confidence 889999762 23488887753 24578889999999999999999999889999999999999999
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCc--------EEEeeecCcccccccCCc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR--------AKIANFALARPAERQEGE 497 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~--------~kl~Dfg~a~~~~~~~~~ 497 (635)
++..... .+++..++.++.|++.||.|||+. +++||||||+||+++.++. ++++|||++......
T Consensus 89 ~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~--- 161 (258)
T cd05078 89 YLKKNKN-LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK--- 161 (258)
T ss_pred HHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccccccCCc---
Confidence 9965443 489999999999999999999985 4999999999999987765 699999988654321
Q ss_pred eeeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcC
Q 042486 498 FALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD 576 (635)
Q Consensus 498 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d 576 (635)
....++..|+|||.+.+ ..++.++||||||+++|||++|..++....+.... .... .
T Consensus 162 ----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~~~~-----------------~ 219 (258)
T cd05078 162 ----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-LQFY-----------------E 219 (258)
T ss_pred ----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-HHHH-----------------H
Confidence 22457888999999986 45789999999999999999996443221111100 0000 0
Q ss_pred CcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 577 PSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 577 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
. ....+......+.+++.+||+.||++|||++++++.|+
T Consensus 220 ~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 D--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred c--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 01122223355899999999999999999999998863
No 275
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.6e-32 Score=289.83 Aligned_cols=238 Identities=26% Similarity=0.339 Sum_probs=175.9
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecC------CeeEEEeecccCCCcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNG------GNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~lV~E~~~~gsL~ 424 (635)
|.||++.. +++.||||++... +.+|+++|++++|+||+++++++... ...|+++|++ +++|.
T Consensus 29 g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 107 (343)
T cd07878 29 GSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLN 107 (343)
T ss_pred eEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHH
Confidence 89999986 6789999998642 34799999999999999999987643 3468999987 77998
Q ss_pred hhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccc
Q 042486 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504 (635)
Q Consensus 425 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 504 (635)
+++... .+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++..... ....
T Consensus 108 ~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~------~~~~ 175 (343)
T cd07878 108 NIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADDE------MTGY 175 (343)
T ss_pred HHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCccceecCCC------cCCc
Confidence 887542 3899999999999999999999855 999999999999999999999999999755332 1234
Q ss_pred ccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc-------hhhhhhhcC
Q 042486 505 VGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG-------EESLRHLMD 576 (635)
Q Consensus 505 ~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-------~~~l~~~~d 576 (635)
.||..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+... .+..... ....... .+.......
T Consensus 176 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 253 (343)
T cd07878 176 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIME-VVGTPSPEVLKKISSEHARKYIQ 253 (343)
T ss_pred cccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHH-HhCCCCHHHHHhcchhhHHHHhh
Confidence 68999999999876 568899999999999999999999885432211 1111110 0000000 000000000
Q ss_pred CcCCCCCC-------hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 577 PSMQGNYP-------PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 577 ~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+..... ......+.+|+.+||+.||++|||+.|++++
T Consensus 254 -~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 254 -SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred -ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 0112347899999999999999999999987
No 276
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.98 E-value=4.5e-32 Score=274.00 Aligned_cols=222 Identities=22% Similarity=0.383 Sum_probs=173.5
Q ss_pred ceEEEeeeC--C----------cEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCc
Q 042486 362 GSVYRGKIG--G----------DFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~~--~----------~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 423 (635)
|.||+|... + ..+++|.+.. .+.+|+.++++++|+||+++++++.. +..++||||+++|+|
T Consensus 9 ~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L 87 (259)
T cd05037 9 TNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPL 87 (259)
T ss_pred ceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcH
Confidence 899999983 2 2478887653 34578999999999999999999988 778999999999999
Q ss_pred chhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC-------cEEEeeecCcccccccCC
Q 042486 424 SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF-------RAKIANFALARPAERQEG 496 (635)
Q Consensus 424 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~-------~~kl~Dfg~a~~~~~~~~ 496 (635)
.+++..... .+++..++.++.|++.||.|||+. +++||||||+||+++.++ .+||+|||++......
T Consensus 88 ~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~-- 161 (259)
T cd05037 88 DVFLHREKN-NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR-- 161 (259)
T ss_pred HHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCcccccccc--
Confidence 999975442 489999999999999999999984 499999999999999887 7999999998765331
Q ss_pred ceeeecccccCCCccCccccccC--CCCcccchhhHHHHHHHHHhC-CCCCCCCcchhhHHHHhhhcccccCCchhhhhh
Q 042486 497 EFALTSHIVGTKGYMAPEYLENG--LVSTKLDVYAFGVLMLEMLSG-KEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573 (635)
Q Consensus 497 ~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDV~SlGvvl~elltG-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 573 (635)
....++..|+|||++... .++.++||||||+++|||++| ..|+........ ...
T Consensus 162 -----~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~--~~~---------------- 218 (259)
T cd05037 162 -----EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK--ERF---------------- 218 (259)
T ss_pred -----cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH--HHH----------------
Confidence 123466789999999876 789999999999999999995 555533211110 000
Q ss_pred hcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 574 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
..... ..+......+.+++.+||..+|.+||++.|+++.|
T Consensus 219 ~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 219 YQDQH---RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HhcCC---CCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00000 00111115689999999999999999999999876
No 277
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.98 E-value=5.3e-32 Score=277.75 Aligned_cols=245 Identities=29% Similarity=0.360 Sum_probs=182.9
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+|+. +++.||+|++.. .+.+|+.++++++|+||+++++++..++..++||||+ +++|.+++...
T Consensus 14 ~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~ 92 (286)
T cd07832 14 GIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDE 92 (286)
T ss_pred cEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhc
Confidence 89999987 688999998853 3557899999999999999999999999999999999 99999998654
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
. ..+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........ .......++..|
T Consensus 93 ~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y 166 (286)
T cd07832 93 E-RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP--RLYSHQVATRWY 166 (286)
T ss_pred C-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--CccccccCcccc
Confidence 3 44899999999999999999999855 99999999999999999999999999886543321 112235688999
Q ss_pred cCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc--hhhh------hhhcCCcCC-
Q 042486 511 MAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG--EESL------RHLMDPSMQ- 580 (635)
Q Consensus 511 ~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~l------~~~~d~~~~- 580 (635)
+|||.+.+. .++.++||||||++++||++|+.++....+. ..+..... .+..... .... ..+..+...
T Consensus 167 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (286)
T cd07832 167 RAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFR-TLGTPNEETWPGLTSLPDYNKITFPESKP 244 (286)
T ss_pred cCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHH-HcCCCChHHHhhccCcchhhcccCCCCCc
Confidence 999988654 4689999999999999999997666433221 11111111 1110000 0000 000000000
Q ss_pred ---CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 581 ---GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 581 ---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..........+.+++.+||+.||++||++++++++
T Consensus 245 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 245 IPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred chHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00111234678999999999999999999999876
No 278
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.98 E-value=7.6e-32 Score=280.16 Aligned_cols=224 Identities=27% Similarity=0.396 Sum_probs=177.4
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+|+. +++.||+|.+.. ++.+|++++++++|+||+++.++|.+++..++||||+. |+|.+++..
T Consensus 29 g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~ 107 (307)
T cd06607 29 GAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEV 107 (307)
T ss_pred eEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHH
Confidence 89999987 688999998742 25578999999999999999999999999999999996 577777753
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....++..
T Consensus 108 ~~-~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-------~~~~~~~~ 176 (307)
T cd06607 108 HK-KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-------NSFVGTPY 176 (307)
T ss_pred cc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC-------CCccCCcc
Confidence 32 34899999999999999999999854 999999999999999999999999998754322 12457889
Q ss_pred ccCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 510 YMAPEYLE---NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 510 y~aPE~~~---~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
|+|||.+. .+.++.++||||||+++|||++|+.|+...+..... ... .........+..
T Consensus 177 y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~-~~~-----------------~~~~~~~~~~~~ 238 (307)
T cd06607 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-YHI-----------------AQNDSPTLSSND 238 (307)
T ss_pred ccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH-HHH-----------------hcCCCCCCCchh
Confidence 99999874 456889999999999999999999887533221110 000 000000111223
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+..+.+++.+||+.||++||++.+++.+
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 239 WSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred hCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 45568999999999999999999999886
No 279
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.98 E-value=4e-32 Score=279.80 Aligned_cols=223 Identities=27% Similarity=0.377 Sum_probs=182.3
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.+|+|.+.. .+.+|++++++++|+||+++++++.+++..++||||+++++|.+++..
T Consensus 15 ~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 94 (290)
T cd05580 15 GRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRK 94 (290)
T ss_pred eEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHH
Confidence 89999988 678999998753 245689999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++...... .....+++.
T Consensus 95 ~~--~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~ 163 (290)
T cd05580 95 SG--RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------TYTLCGTPE 163 (290)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC------CCCCCCCcc
Confidence 53 489999999999999999999985 4999999999999999999999999998765432 223468899
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||.+.+...+.++||||||+++|+|++|+.||...+... ....+.... ...+...+.
T Consensus 164 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------------------~~~~~~~~~--~~~~~~~~~ 223 (290)
T cd05580 164 YLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ------------------IYEKILEGK--VRFPSFFSP 223 (290)
T ss_pred ccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------------------HHHHHhcCC--ccCCccCCH
Confidence 999999988888999999999999999999999975433111 011111111 112233355
Q ss_pred HHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
.+.+++.+||..||.+|+ +++|++++
T Consensus 224 ~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 224 DAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred HHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 689999999999999999 77788765
No 280
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.98 E-value=6.5e-32 Score=276.26 Aligned_cols=226 Identities=25% Similarity=0.390 Sum_probs=182.1
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|.. ++..+|+|.... ++.+|+.++++++|+||+++++++..++..++||||+++++|.+++...
T Consensus 18 ~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~- 96 (277)
T cd06641 18 GEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG- 96 (277)
T ss_pred eEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC-
Confidence 89999986 678999998752 3557899999999999999999999999999999999999999998643
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
.+++..+..++.+++.++.|||+. +++|+||+|+||+++.++.++|+|||++........ ......++..|+
T Consensus 97 --~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~ 168 (277)
T cd06641 97 --PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI---KRNTFVGTPFWM 168 (277)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchh---hhccccCCcccc
Confidence 389999999999999999999985 499999999999999999999999999875533211 112245788999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHH
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILV 591 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l 591 (635)
|||.+.+...+.++|+||||+++|+|++|..|+....... ...... .......+...+..+
T Consensus 169 ~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~-----------------~~~~~~~~~~~~~~~ 229 (277)
T cd06641 169 APEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--VLFLIP-----------------KNNPPTLEGNYSKPL 229 (277)
T ss_pred ChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--HHHHHh-----------------cCCCCCCCcccCHHH
Confidence 9999988888999999999999999999999875322111 001000 000111222344558
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 592 IRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 592 ~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+++.+||+.+|.+||++.+++++
T Consensus 230 ~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 230 KEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHccCChhhCcCHHHHHhC
Confidence 899999999999999999999996
No 281
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.98 E-value=7.5e-32 Score=273.02 Aligned_cols=230 Identities=27% Similarity=0.406 Sum_probs=185.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+++. +++.|+||++... +.+|++.+++++|+|++++++++...+..++||||+++++|.+++...
T Consensus 15 ~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~- 93 (264)
T cd06623 15 GVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV- 93 (264)
T ss_pred eEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-
Confidence 78999988 5889999987543 557899999999999999999999999999999999999999999654
Q ss_pred CCCCCHHHHHHHHHHHHhhhccccc-CCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHS-FTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
..+++..+..++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||.+......... .....++..|
T Consensus 94 -~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y 166 (264)
T cd06623 94 -GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ---CNTFVGTVTY 166 (264)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCCc---ccceeecccc
Confidence 348999999999999999999998 66 999999999999999999999999998865433221 1234578899
Q ss_pred cCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH-HHH
Q 042486 511 MAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV-TAI 589 (635)
Q Consensus 511 ~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~-~~~ 589 (635)
+|||.+.+..++.++|+||||+++|+|++|+.|+....... . .+....+..... ...+.. .+.
T Consensus 167 ~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~-------------~~~~~~~~~~~~-~~~~~~~~~~ 230 (264)
T cd06623 167 MSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS--F-------------FELMQAICDGPP-PSLPAEEFSP 230 (264)
T ss_pred cCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC--H-------------HHHHHHHhcCCC-CCCCcccCCH
Confidence 99999998889999999999999999999999986433100 0 011111111111 111222 456
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+.+++.+||..+|++||++.|++++
T Consensus 231 ~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 231 EFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHhC
Confidence 69999999999999999999999986
No 282
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=8.9e-34 Score=316.98 Aligned_cols=241 Identities=25% Similarity=0.363 Sum_probs=192.4
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEee
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYE 416 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 416 (635)
-++..+..|| |.||.+.. +|...|+|-++- ...+|+.+|..++|||+|+++|+-.+.+..+|.||
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 3444555665 89999987 788999996643 35689999999999999999999999999999999
Q ss_pred cccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCC
Q 042486 417 NAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG 496 (635)
Q Consensus 417 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 496 (635)
||++|+|.+.+...+. .++.....+..|++.|+.|||+++ ||||||||.||+|+.+|.+|++|||.|........
T Consensus 1315 yC~~GsLa~ll~~gri--~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRI--EDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred HhccCcHHHHHHhcch--hhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence 9999999999965432 566666778899999999999977 99999999999999999999999999987654421
Q ss_pred c-eeeecccccCCCccCccccccC---CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhh
Q 042486 497 E-FALTSHIVGTKGYMAPEYLENG---LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLR 572 (635)
Q Consensus 497 ~-~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~ 572 (635)
. ........||+.|||||++.+. ....+.||||+|||++||+||+.||...+.+-...+.+..
T Consensus 1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~------------- 1456 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA------------- 1456 (1509)
T ss_pred cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhc-------------
Confidence 1 1122457899999999999752 3456899999999999999999999765554322222211
Q ss_pred hhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 573 HLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 573 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.-....|...+.+-.+++.+||+.||++|.++.|++++
T Consensus 1457 -----gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1457 -----GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -----cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 11223455566778999999999999999999988876
No 283
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.98 E-value=4.1e-32 Score=281.92 Aligned_cols=245 Identities=20% Similarity=0.252 Sum_probs=185.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||++.. .++.||+|.+... +.+|++++++++|+||+++++.+..++..++||||+++++|.+++..
T Consensus 15 ~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~ 94 (305)
T cd05609 15 GAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKN 94 (305)
T ss_pred eeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHH
Confidence 79999987 5789999987542 34788999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCC------------c
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG------------E 497 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------~ 497 (635)
.. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....... .
T Consensus 95 ~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~ 169 (305)
T cd05609 95 IG--ALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTR 169 (305)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchh
Confidence 43 3899999999999999999999854 99999999999999999999999999864211100 0
Q ss_pred eeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCC
Q 042486 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDP 577 (635)
Q Consensus 498 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~ 577 (635)
........++..|+|||.+.+..++.++|+||||+++|||++|+.||....... ........ ....+
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~-~~~~~~~~------------~~~~~ 236 (305)
T cd05609 170 EFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-LFGQVISD------------DIEWP 236 (305)
T ss_pred hccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhc------------ccCCC
Confidence 001112457889999999988889999999999999999999999975322111 11000000 00011
Q ss_pred cCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcccccc
Q 042486 578 SMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 578 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w~~ 628 (635)
.. ....+..+.+++.+||+.||++||++.++.+.|+.-.-...+|..
T Consensus 237 ~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~ 283 (305)
T cd05609 237 EG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNG 283 (305)
T ss_pred Cc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHH
Confidence 11 112345589999999999999999977666666664434455543
No 284
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.98 E-value=3.8e-32 Score=279.10 Aligned_cols=246 Identities=25% Similarity=0.379 Sum_probs=183.2
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||++.. +++.||+|+++. .+.+|++++++++|+||+++++++..++..+++|||++++.+..+....
T Consensus 15 ~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~ 94 (288)
T cd07833 15 GVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASP 94 (288)
T ss_pred eeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcC
Confidence 79999987 578999998753 3568999999999999999999999999999999999987776665443
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
..+++..+..++.+++.||.|||+. +++|+||+|+||++++++.+||+|||++......... ......++..|
T Consensus 95 --~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~ 167 (288)
T cd07833 95 --GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPAS--PLTDYVATRWY 167 (288)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCccc--cccCcccccCC
Confidence 2389999999999999999999985 4999999999999999999999999998866543321 12234678899
Q ss_pred cCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhh---hccccc----CCchhhhh--hhcCCc--
Q 042486 511 MAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVL---NPVLHK----EDGEESLR--HLMDPS-- 578 (635)
Q Consensus 511 ~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~---~~~~~~----~~~~~~l~--~~~d~~-- 578 (635)
+|||++... .++.++||||||+++|+|++|+.||......+. +.... ...... ........ ++.+..
T Consensus 168 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (288)
T cd07833 168 RAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ-LYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQP 246 (288)
T ss_pred cCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHhhhcccCccccccccCCCCCc
Confidence 999999877 789999999999999999999988864333211 11110 000000 00000000 000000
Q ss_pred --CCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 579 --MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 579 --~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
....++...+..+.+++++||..+|++||++++++++
T Consensus 247 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 247 ESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred HHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0011223346679999999999999999999999864
No 285
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.98 E-value=2.8e-32 Score=282.07 Aligned_cols=228 Identities=21% Similarity=0.362 Sum_probs=182.0
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||++.. +++.||+|.+.. .+.+|+.++++++||||+++++++..++..++++||+++++|.+++...
T Consensus 35 g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-- 112 (297)
T cd06659 35 GIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQT-- 112 (297)
T ss_pred eeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhhc--
Confidence 89999987 688999998743 3557899999999999999999999999999999999999999887542
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... .......++..|+|
T Consensus 113 -~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~---~~~~~~~~~~~y~a 185 (297)
T cd06659 113 -RLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---PKRKSLVGTPYWMA 185 (297)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc---ccccceecCccccC
Confidence 3899999999999999999999854 9999999999999999999999999986543221 11223568899999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
||++.+..++.++||||||+++|||++|+.||........ + ...... ..+.. ......+..+.
T Consensus 186 PE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~-~~~~~~-------------~~~~~--~~~~~~~~~l~ 248 (297)
T cd06659 186 PEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-M-KRLRDS-------------PPPKL--KNAHKISPVLR 248 (297)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H-HHHhcc-------------CCCCc--cccCCCCHHHH
Confidence 9999888899999999999999999999999864322111 1 111000 00000 01112334588
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHH
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+++.+||+.+|++||+++|++++
T Consensus 249 ~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 249 DFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHhcCCcccCcCHHHHhhC
Confidence 99999999999999999999986
No 286
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.98 E-value=7.8e-34 Score=272.68 Aligned_cols=230 Identities=27% Similarity=0.401 Sum_probs=190.8
Q ss_pred ceEEEeee--CCcEEEEEEecc-----ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-----DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-----~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
|+|||+.. .|+.+|||++.- ++.+|+.+|.+++.+++|+++|.+.....+++|||||..|++.+.++.+ +++
T Consensus 47 GSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R-~K~ 125 (502)
T KOG0574|consen 47 GSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRAR-RKP 125 (502)
T ss_pred hHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHh-cCC
Confidence 88998866 899999999864 3568999999999999999999999999999999999999999999644 356
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
|++.++..++.+-++||+|||... -+|||||..|||++.+|.+||+|||.+-...... .......||+.|||||
T Consensus 126 L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPE 199 (502)
T KOG0574|consen 126 LSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPE 199 (502)
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhhH---HhhCccccCcccccHH
Confidence 999999999999999999999865 8999999999999999999999999987554332 2345578999999999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRL 594 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~l 594 (635)
++..-.|..++||||||+...||..|++|+.....-. ..+- ---.|......|...+..+.++
T Consensus 200 VI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR--------AIFM---------IPT~PPPTF~KPE~WS~~F~DF 262 (502)
T KOG0574|consen 200 VIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR--------AIFM---------IPTKPPPTFKKPEEWSSEFNDF 262 (502)
T ss_pred HHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc--------eeEe---------ccCCCCCCCCChHhhhhHHHHH
Confidence 9998889999999999999999999999864211100 0000 0001122233467778889999
Q ss_pred HHHhhhcCCCCCCCHHHHHHH
Q 042486 595 IESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 595 i~~cl~~dP~~RPs~~evl~~ 615 (635)
+++||-..|++|-|+.++++|
T Consensus 263 i~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 263 IRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred HHHHhcCCHHHHHHHHHHhhh
Confidence 999999999999999998876
No 287
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.98 E-value=4.6e-32 Score=278.03 Aligned_cols=245 Identities=26% Similarity=0.348 Sum_probs=182.5
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+|.. +|..||+|++.. .+.+|++++++++|+|++++++++.+++..+++|||++ ++|.+++...
T Consensus 13 ~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~ 91 (283)
T cd07835 13 GVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSS 91 (283)
T ss_pred eEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhC
Confidence 89999987 689999998752 35579999999999999999999999999999999995 6899998665
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
....+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++........ ......++..|
T Consensus 92 ~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~~ 165 (283)
T cd07835 92 PLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR---TYTHEVVTLWY 165 (283)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc---ccCccccccCC
Confidence 434589999999999999999999984 499999999999999999999999999875432211 11223568899
Q ss_pred cCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC-----------chhhhhhhcCCc
Q 042486 511 MAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED-----------GEESLRHLMDPS 578 (635)
Q Consensus 511 ~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~-----------~~~~l~~~~d~~ 578 (635)
+|||++.+. .++.++||||||+++|+|++|+.||...+... .+.+.......... ............
T Consensus 166 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (283)
T cd07835 166 RAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQD 244 (283)
T ss_pred CCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccc
Confidence 999987654 56889999999999999999999886433221 11111111100000 000000000000
Q ss_pred CCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 579 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
. .......+..+.+++.+||+.||++||+++|++++
T Consensus 245 ~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 245 L-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred h-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 01122234568899999999999999999999865
No 288
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.98 E-value=2.2e-31 Score=271.11 Aligned_cols=237 Identities=17% Similarity=0.345 Sum_probs=172.6
Q ss_pred ceEEEeee-CC---cEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI-GG---DFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~-~~---~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+|+. ++ ..+++|.++. .+.+|+.++++++||||+++++.|.+....++||||+++|+|.+++..
T Consensus 9 g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 88 (268)
T cd05086 9 GKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQ 88 (268)
T ss_pred ceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHh
Confidence 89999976 32 3466776543 355788889999999999999999999999999999999999999965
Q ss_pred cC--CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 430 KG--GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 430 ~~--~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.. ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++........ ........++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~ 164 (268)
T cd05086 89 EQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY-IETEDDKCVP 164 (268)
T ss_pred hhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchh-hhcccCCcCc
Confidence 32 234677788899999999999999854 99999999999999999999999999764322110 1112234678
Q ss_pred CCccCcccccc-------CCCCcccchhhHHHHHHHHHhC-CCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcC
Q 042486 508 KGYMAPEYLEN-------GLVSTKLDVYAFGVLMLEMLSG-KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSM 579 (635)
Q Consensus 508 ~~y~aPE~~~~-------~~~s~ksDV~SlGvvl~elltG-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~ 579 (635)
..|+|||++.. ..++.++||||||+++|||+++ ..|+......+ .+..... +....+.++.+
T Consensus 165 ~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~---------~~~~~~~~~~~ 234 (268)
T cd05086 165 LRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-VLNHVIK---------DQQVKLFKPQL 234 (268)
T ss_pred ccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHh---------hcccccCCCcc
Confidence 89999998753 2357899999999999999985 44553322211 1111110 00011222222
Q ss_pred CCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 580 QGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 580 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.. .....+.+++..|| .+|++||+++||++.|.
T Consensus 235 ~~----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 235 EL----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CC----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 22 23445788999999 68999999999998874
No 289
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.8e-32 Score=278.30 Aligned_cols=220 Identities=21% Similarity=0.358 Sum_probs=188.3
Q ss_pred eeCCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCCHH
Q 042486 368 KIGGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWA 438 (635)
Q Consensus 368 ~~~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~ 438 (635)
.++|..||||++.+ .+.+|++.|+-++|||||+|+.+......+|||+|+=.+|+|.+|+-+... .+.+.
T Consensus 40 VFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~-Gl~E~ 118 (864)
T KOG4717|consen 40 VFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEE-GLNED 118 (864)
T ss_pred hcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhc-cccHH
Confidence 34889999999854 356899999999999999999999999999999999999999999955432 39999
Q ss_pred HHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEE-CCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccc
Q 042486 439 QRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL-DTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLE 517 (635)
Q Consensus 439 ~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 517 (635)
...+++.||+.|+.|+|+.+ +|||||||+|+++ ..-|-+||.|||++-...+... ....+|...|-|||++.
T Consensus 119 La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k----L~TsCGSLAYSAPEILL 191 (864)
T KOG4717|consen 119 LAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK----LTTSCGSLAYSAPEILL 191 (864)
T ss_pred HHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcch----hhcccchhhccCchhhh
Confidence 99999999999999999988 9999999999977 5568999999999976655432 34578999999999999
Q ss_pred cCCC-CcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHH
Q 042486 518 NGLV-STKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIE 596 (635)
Q Consensus 518 ~~~~-s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~ 596 (635)
+..| .++.|||||||+||.|++|+.||.. .+..+.+..+||-.. ..|...+.+..+||.
T Consensus 192 GDsYDAPAVDiWSLGVILyMLVCGq~PFqe------------------ANDSETLTmImDCKY--tvPshvS~eCrdLI~ 251 (864)
T KOG4717|consen 192 GDSYDAPAVDIWSLGVILYMLVCGQPPFQE------------------ANDSETLTMIMDCKY--TVPSHVSKECRDLIQ 251 (864)
T ss_pred cCccCCcchhhhHHHHHHHHHHhCCCcccc------------------ccchhhhhhhhcccc--cCchhhhHHHHHHHH
Confidence 8777 4689999999999999999999753 333466677777543 467888889999999
Q ss_pred HhhhcCCCCCCCHHHHHHH
Q 042486 597 SCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 597 ~cl~~dP~~RPs~~evl~~ 615 (635)
+||..||++|.+.+||+.+
T Consensus 252 sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 252 SMLVRDPKKRASLEEIVST 270 (864)
T ss_pred HHHhcCchhhccHHHHhcc
Confidence 9999999999999999865
No 290
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.98 E-value=2.2e-32 Score=282.18 Aligned_cols=228 Identities=22% Similarity=0.384 Sum_probs=182.2
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||++.. ++..||||++.. .+.+|+.++++++|+||+++++.+..++..++||||+++++|.+++...
T Consensus 36 g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-- 113 (292)
T cd06658 36 GIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT-- 113 (292)
T ss_pred eEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhcC--
Confidence 89999987 688999998754 3557899999999999999999999999999999999999999988543
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
.+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++........ ......++..|+|
T Consensus 114 -~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~~y~a 186 (292)
T cd06658 114 -RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP---KRKSLVGTPYWMA 186 (292)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc---cCceeecCccccC
Confidence 3899999999999999999999854 99999999999999999999999999875432211 1223468899999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
||.+.+..++.++||||||+++|||++|+.|+........ . . .+.....+.... ....+..+.
T Consensus 187 PE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~-~-------------~~~~~~~~~~~~--~~~~~~~~~ 249 (292)
T cd06658 187 PEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-M-R-------------RIRDNLPPRVKD--SHKVSSVLR 249 (292)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H-H-------------HHHhcCCCcccc--ccccCHHHH
Confidence 9999888899999999999999999999999753222110 0 0 011111111111 112344588
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHH
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+++.+||..||++|||++|++++
T Consensus 250 ~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 250 GFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHccCChhHCcCHHHHhhC
Confidence 99999999999999999999986
No 291
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.98 E-value=6.6e-32 Score=278.13 Aligned_cols=244 Identities=24% Similarity=0.320 Sum_probs=178.5
Q ss_pred ceEEEeee--CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|+. +++.||||.+... +.+|++++++++|+||+++++++.+++..++||||+.+ +|.+++....
T Consensus 19 ~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~ 97 (291)
T cd07844 19 ATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCG 97 (291)
T ss_pred eEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCC
Confidence 79999987 6789999987532 35799999999999999999999999999999999975 8999886543
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
. .+++.....++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++........ .....++..|+
T Consensus 98 ~-~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~ 170 (291)
T cd07844 98 G-GLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT---YSNEVVTLWYR 170 (291)
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCcc---ccccccccccC
Confidence 3 4899999999999999999999854 999999999999999999999999998754322111 11234678899
Q ss_pred Ccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhh------c--------C
Q 042486 512 APEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL------M--------D 576 (635)
Q Consensus 512 aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~------~--------d 576 (635)
|||.+.+ ..++.++||||||+++|||++|+.||.........+... ......... +..... . .
T Consensus 171 aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 248 (291)
T cd07844 171 PPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKI-FRVLGTPTE-ETWPGVSSNPEFKPYSFPFYPP 248 (291)
T ss_pred CcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHH-HHhcCCCCh-hhhhhhhhccccccccccccCC
Confidence 9998865 457899999999999999999999885433211111111 010100000 000000 0 0
Q ss_pred CcCCCCCC-hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 577 PSMQGNYP-PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 577 ~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+....+ ......+.+++.+||+.||++||++.|++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 249 RPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000000 0011457899999999999999999998864
No 292
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.98 E-value=3.2e-32 Score=309.94 Aligned_cols=241 Identities=22% Similarity=0.307 Sum_probs=182.4
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEec--CCeeEEE
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFN--GGNWYLV 414 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV 414 (635)
++|.....|| |.||+++. .+..+|+|.+.. .+..|+.+|++++||||++++++|.+ .+.+|||
T Consensus 13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIV 92 (1021)
T PTZ00266 13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYIL 92 (1021)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEE
Confidence 3444444444 89999987 677899998753 25579999999999999999998864 3568999
Q ss_pred eecccCCCcchhhccc--CCCCCCHHHHHHHHHHHHhhhcccccCCC----CCeEeecccCCCEEECC------------
Q 042486 415 YENAVNGSLSVWINDK--GGKFLDWAQRIQIALDVATGLNYLHSFTN----PPHVHKDIKCSNVLLDT------------ 476 (635)
Q Consensus 415 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~----~~ivH~Dikp~NIll~~------------ 476 (635)
|||+++|+|.+++... ....+++..++.|+.||+.||.|||+.+. .+|+||||||+||||+.
T Consensus 93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~ 172 (1021)
T PTZ00266 93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA 172 (1021)
T ss_pred EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence 9999999999999542 22348999999999999999999998542 45999999999999964
Q ss_pred -----CCcEEEeeecCcccccccCCceeeecccccCCCccCcccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCcc
Q 042486 477 -----DFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN--GLVSTKLDVYAFGVLMLEMLSGKEAPALYSE 549 (635)
Q Consensus 477 -----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~SlGvvl~elltG~~p~~~~~~ 549 (635)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 173 ~n~ng~~iVKLsDFGlAr~l~~~s----~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 173 NNLNGRPIAKIGDFGLSKNIGIES----MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred cccCCCCceEEccCCccccccccc----cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 3458999999997654321 1234578999999999854 4588999999999999999999999864322
Q ss_pred hhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 550 ENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 550 ~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
....+ ..+.. .+.+. ....+..+.+||..||..+|.+||++.|++.+
T Consensus 249 ~~qli-~~lk~---------------~p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 249 FSQLI-SELKR---------------GPDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HHHHH-HHHhc---------------CCCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 11111 11000 00000 01124558999999999999999999999864
No 293
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.98 E-value=1.1e-31 Score=271.90 Aligned_cols=233 Identities=26% Similarity=0.440 Sum_probs=182.6
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+|.. +++.+|+|.++.. +.+|++++++++|+||+++++++.+.+..++|+||+++++|.+++...
T Consensus 14 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~ 93 (264)
T cd06626 14 GKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHG 93 (264)
T ss_pred cEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhc
Confidence 79999987 6789999987542 457899999999999999999999999999999999999999999654
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceee-ecccccCCC
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL-TSHIVGTKG 509 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~-~~~~~gt~~ 509 (635)
. .+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.+||+|||++............ .....++..
T Consensus 94 ~--~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T cd06626 94 R--ILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPA 168 (264)
T ss_pred C--CCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcC
Confidence 3 3789999999999999999999855 999999999999999999999999998865443221111 123467889
Q ss_pred ccCccccccCC---CCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 510 YMAPEYLENGL---VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 510 y~aPE~~~~~~---~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
|+|||++.... .+.++||||||+++|||++|+.||...+........... ...+.+.. ...
T Consensus 169 ~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~--------------~~~~~~~~--~~~ 232 (264)
T cd06626 169 YMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA--------------GHKPPIPD--SLQ 232 (264)
T ss_pred ccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc--------------CCCCCCCc--ccc
Confidence 99999998765 889999999999999999999998643222111111000 00011100 111
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+..+.+++.+||+.||.+||++.|++.+
T Consensus 233 ~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 233 LSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 24557899999999999999999998753
No 294
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.98 E-value=1e-31 Score=281.99 Aligned_cols=251 Identities=20% Similarity=0.298 Sum_probs=182.8
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|+||+++. +++.||+|.+.. .+.+|+.+++.++|+||+++++++..++..++|+||+.+++|.+++...
T Consensus 14 ~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~ 93 (328)
T cd08226 14 TSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTY 93 (328)
T ss_pred eeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhh
Confidence 68999987 789999998753 2456888888899999999999999999999999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc----eeeeccccc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE----FALTSHIVG 506 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~g 506 (635)
....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+......... ........+
T Consensus 94 ~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (328)
T cd08226 94 FPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTS 170 (328)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccC
Confidence 444589999999999999999999985 4999999999999999999999999865432211100 000111234
Q ss_pred CCCccCccccccC--CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC------------------
Q 042486 507 TKGYMAPEYLENG--LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED------------------ 566 (635)
Q Consensus 507 t~~y~aPE~~~~~--~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~------------------ 566 (635)
+..|+|||++.+. .++.++|||||||++|||++|+.||.....................+
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (328)
T cd08226 171 VLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGV 250 (328)
T ss_pred ccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhh
Confidence 5679999998763 47899999999999999999999986543322111111100000000
Q ss_pred ----chhhhh-----hhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 567 ----GEESLR-----HLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 567 ----~~~~l~-----~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...... ...+..+....+......+.+|+.+||+.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 251 DSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000000 0111111222234456778999999999999999999999866
No 295
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.98 E-value=2.6e-32 Score=280.16 Aligned_cols=246 Identities=26% Similarity=0.397 Sum_probs=181.2
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||++.. +++.||+|++.. .+.+|++++++++|+||+++++++..++..++|+||+++++|.++....
T Consensus 15 ~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~ 94 (286)
T cd07846 15 GMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYP 94 (286)
T ss_pred eEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhcc
Confidence 79999998 578999998743 2457999999999999999999999999999999999999998877543
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
. .+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........ ......++..|
T Consensus 95 ~--~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y 166 (286)
T cd07846 95 N--GLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---VYTDYVATRWY 166 (286)
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc---ccCcccceeec
Confidence 2 3899999999999999999999854 99999999999999999999999999876533221 12234578899
Q ss_pred cCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhh--HHHHhhhcccccCCc----hhhhhhhcCCcCCC--
Q 042486 511 MAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENM--LLVDVLNPVLHKEDG----EESLRHLMDPSMQG-- 581 (635)
Q Consensus 511 ~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~--~l~~~~~~~~~~~~~----~~~l~~~~d~~~~~-- 581 (635)
+|||++.+ ..++.++||||||+++|||++|+.|+........ ............... .........+....
T Consensus 167 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (286)
T cd07846 167 RAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIE 246 (286)
T ss_pred cCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcc
Confidence 99998865 4578899999999999999999988754322110 011111110000000 00000000111100
Q ss_pred ---CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 582 ---NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 582 ---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+..+..+.+++.+||+.||++||++.+++++
T Consensus 247 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 247 PLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 0012235668999999999999999999999875
No 296
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=5.2e-34 Score=267.12 Aligned_cols=227 Identities=24% Similarity=0.288 Sum_probs=177.6
Q ss_pred ceEEEeee--CCcEEEEEEec---------cChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVY---------GDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~---------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
+.||+... +|+.+|+|.+. +++.+|+.+.+.++||||++|.+....++..|||+|++.|++|..-+-.+
T Consensus 25 SvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R 104 (355)
T KOG0033|consen 25 SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR 104 (355)
T ss_pred HHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHH
Confidence 34555543 56666666542 24668999999999999999999999999999999999999997666332
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC---CCcEEEeeecCcccccccCCceeeecccccC
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT---DFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
...++...-..+.||++||.|+|. ++|||||+||.|+++.. .--+||+|||+|...... ..-....||
T Consensus 105 --~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g----~~~~G~~Gt 175 (355)
T KOG0033|consen 105 --EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG----EAWHGFAGT 175 (355)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeCCc----cccccccCC
Confidence 347888999999999999999998 55999999999999943 345999999999877632 223457899
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCc--CCCCCCh
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS--MQGNYPP 585 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~--~~~~~~~ 585 (635)
++|||||++....++..+|||+.||+||-|+.|.+||...+. ..+.+. ++... +.+.+.+
T Consensus 176 P~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~--~rlye~----------------I~~g~yd~~~~~w~ 237 (355)
T KOG0033|consen 176 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYEQ----------------IKAGAYDYPSPEWD 237 (355)
T ss_pred CcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH--HHHHHH----------------HhccccCCCCcccC
Confidence 999999999999999999999999999999999999853222 222222 22111 1122233
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...++..+|+++||..||++|.|+.|.++|
T Consensus 238 ~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 238 TVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred cCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 445667899999999999999999998765
No 297
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.98 E-value=1.3e-31 Score=273.07 Aligned_cols=235 Identities=21% Similarity=0.354 Sum_probs=179.2
Q ss_pred ceEEEeee-----CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCC------eeEEEeecccCC
Q 042486 362 GSVYRGKI-----GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGG------NWYLVYENAVNG 421 (635)
Q Consensus 362 g~Vy~g~~-----~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~------~~~lV~E~~~~g 421 (635)
|.||+|.+ ++..||||.++.+ +.+|++++++++||||+++++++...+ ..++++||+.+|
T Consensus 13 g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
T cd05074 13 GSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHG 92 (273)
T ss_pred CCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCC
Confidence 89999986 3578999988653 457899999999999999999886532 247899999999
Q ss_pred Ccchhhccc----CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc
Q 042486 422 SLSVWINDK----GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE 497 (635)
Q Consensus 422 sL~~~l~~~----~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 497 (635)
+|.+++... ....+++.....++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 93 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~- 168 (273)
T cd05074 93 DLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY- 168 (273)
T ss_pred cHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcccccccccCCcc-
Confidence 999887321 122478999999999999999999985 499999999999999999999999999886533221
Q ss_pred eeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcC
Q 042486 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD 576 (635)
Q Consensus 498 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d 576 (635)
........++..|++||.+.+..++.++||||||+++|||++ |+.|+...... ........
T Consensus 169 ~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~---------------- 230 (273)
T cd05074 169 YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNYLIK---------------- 230 (273)
T ss_pred eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHHHHc----------------
Confidence 111122345578999999998889999999999999999999 77776432221 11111110
Q ss_pred CcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042486 577 PSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRF 619 (635)
Q Consensus 577 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 619 (635)
.. ....+...+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 231 ~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GN-RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CC-cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0011123345689999999999999999999999999875
No 298
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.98 E-value=3.9e-32 Score=288.38 Aligned_cols=244 Identities=22% Similarity=0.338 Sum_probs=185.6
Q ss_pred ceEEEeee--CCcEEEEEEeccC------hHHHHHHHhhhc-c-----CCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD------ASDQIKLLNKIN-H-----SSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~------~~~E~~~l~~l~-h-----~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.|.|+.. +++.||||.++.+ ...|+.+|..|+ | -|+|+++++|...++.|||+|.+ ..+|.+++
T Consensus 200 GQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYell 278 (586)
T KOG0667|consen 200 GQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELL 278 (586)
T ss_pred ceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh-hhhHHHHH
Confidence 89999987 7899999999874 346899999997 3 48999999999999999999988 55999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC--CcEEEeeecCcccccccCCceeeecccc
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD--FRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~--~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
+.+.-..++...+..|+.||+.||.+||+.+ |||+||||+||||.+- ..+||+|||.++......- ...
T Consensus 279 K~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy------tYi 349 (586)
T KOG0667|consen 279 KNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY------TYI 349 (586)
T ss_pred HhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccccCCcce------eee
Confidence 8877777999999999999999999999865 9999999999999543 4799999999987654321 345
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhH--HHHhhh--------------ccccc-CC--
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENML--LVDVLN--------------PVLHK-ED-- 566 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~--l~~~~~--------------~~~~~-~~-- 566 (635)
.+..|+|||++.+..|+.+.||||||||+.||++|.+.|...++.++. +.+.+. .++.. ..
T Consensus 350 QSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~ 429 (586)
T KOG0667|consen 350 QSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFP 429 (586)
T ss_pred eccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCce
Confidence 778899999999999999999999999999999997666554433211 011100 11111 00
Q ss_pred ----ch------------hhhhhhcCCc-CC-------CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 567 ----GE------------ESLRHLMDPS-MQ-------GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 567 ----~~------------~~l~~~~d~~-~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.. ..+....+.. .. ..........+.+++++||+.||.+|+|..|.++|
T Consensus 430 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~H 502 (586)
T KOG0667|consen 430 RLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNH 502 (586)
T ss_pred eeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 00 0000001110 00 01112345568999999999999999999999987
No 299
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.98 E-value=5.3e-32 Score=273.14 Aligned_cols=229 Identities=23% Similarity=0.390 Sum_probs=183.3
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||++.. ++..+|+|.+.. .+.+|++++++++|+||+++++.+..++..++|+||+++++|.+++...
T Consensus 14 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~ 93 (257)
T cd08225 14 GKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQ 93 (257)
T ss_pred ceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhc
Confidence 79999988 678999998743 2457999999999999999999999999999999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC-cEEEeeecCcccccccCCceeeecccccCCC
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF-RAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
....+++..+..++.|++.||.|||+.+ ++|+||||+||++++++ .+||+|||.+........ ......|+..
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~ 167 (257)
T cd08225 94 RGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME---LAYTCVGTPY 167 (257)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCcc---cccccCCCcc
Confidence 5445899999999999999999999855 99999999999998885 569999999876543221 1223468889
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++.+..++.++|+||||++++||++|+.|+......... ... ...... ..+...+.
T Consensus 168 ~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~-----------------~~~~~~-~~~~~~~~ 228 (257)
T cd08225 168 YLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLV-LKI-----------------CQGYFA-PISPNFSR 228 (257)
T ss_pred ccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHH-HHH-----------------hcccCC-CCCCCCCH
Confidence 99999998888999999999999999999999997543221111 111 111110 11122344
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+.+++.+||..+|++||+++|++++
T Consensus 229 ~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 229 DLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHHHHHHHhccChhhCcCHHHHhhC
Confidence 58999999999999999999999875
No 300
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.98 E-value=1.2e-31 Score=274.86 Aligned_cols=230 Identities=22% Similarity=0.337 Sum_probs=174.5
Q ss_pred ceEEEeee--CCcEEEEEEeccC--------hHHHHHH-HhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD--------ASDQIKL-LNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~--------~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+++. +++.||+|+++.. +..|+.. ++..+|+||+++++++..++..+++|||++ |+|.+++...
T Consensus 15 g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~ 93 (283)
T cd06617 15 GVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKV 93 (283)
T ss_pred eEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHh
Confidence 89999988 6899999988653 2234444 555689999999999999999999999996 6888777432
Q ss_pred --CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 431 --GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 431 --~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
....+++..+..++.|++.||.|||+. .+++||||||+||+++.++.+||+|||++....... ......++.
T Consensus 94 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~ 167 (283)
T cd06617 94 YDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV----AKTIDAGCK 167 (283)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeccccccccccc----ccccccCCc
Confidence 234589999999999999999999983 259999999999999999999999999987553221 112246788
Q ss_pred CccCcccccc----CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 509 GYMAPEYLEN----GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 509 ~y~aPE~~~~----~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
.|+|||.+.+ ..++.++|+||||+++|||++|+.|+.........+ .............
T Consensus 168 ~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 230 (283)
T cd06617 168 PYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQL-----------------KQVVEEPSPQLPA 230 (283)
T ss_pred cccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHH-----------------HHHHhcCCCCCCc
Confidence 9999998864 446889999999999999999999975322111111 1111110000001
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 585 PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 585 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+..+.+++.+||..+|++||++++++++
T Consensus 231 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 231 EKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1234568999999999999999999999875
No 301
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.98 E-value=1.3e-31 Score=275.64 Aligned_cols=233 Identities=24% Similarity=0.345 Sum_probs=181.0
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecC--CeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNG--GNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||++.. +++.+|+|.+.. ++.+|++++++++|+||+++++++.+. +..++||||+++++|.+++..
T Consensus 15 ~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 94 (287)
T cd06621 15 GSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKK 94 (287)
T ss_pred eEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHH
Confidence 89999998 678999998763 256899999999999999999998653 468999999999999988743
Q ss_pred --cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 430 --KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 430 --~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .....++
T Consensus 95 ~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~ 166 (287)
T cd06621 95 VKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-----AGTFTGT 166 (287)
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccccc-----cccccCC
Confidence 22344889999999999999999999854 9999999999999999999999999987543221 1124577
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcch---hhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE---NMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~---~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
..|+|||.+.+..++.++||||||+++|+|++|+.|+...... ......+... ...+.+.....
T Consensus 167 ~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 233 (287)
T cd06621 167 SFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN-------------MPNPELKDEPG 233 (287)
T ss_pred ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc-------------CCchhhccCCC
Confidence 8899999999888999999999999999999999998643211 0111111110 00011111111
Q ss_pred --hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 585 --PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 585 --~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+..+.+++.+||+.||.+|||+.|++++
T Consensus 234 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 234 NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 1235668999999999999999999999985
No 302
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.98 E-value=1.7e-31 Score=271.82 Aligned_cols=226 Identities=22% Similarity=0.263 Sum_probs=177.5
Q ss_pred ceEEEeee--CCcEEEEEEeccChHH--HHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGDASD--QIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLD 436 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~~~~--E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~ 436 (635)
|.||++.. ++..+|+|........ |+.....+ +|+||+++++.+..++..++||||+++++|.+++.... .++
T Consensus 30 g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~--~l~ 107 (267)
T PHA03390 30 GKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEG--KLS 107 (267)
T ss_pred eEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcC--CCC
Confidence 89999986 6789999998654322 34333323 79999999999999999999999999999999996553 489
Q ss_pred HHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC-cEEEeeecCcccccccCCceeeecccccCCCccCccc
Q 042486 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF-RAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEY 515 (635)
Q Consensus 437 ~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~ 515 (635)
+.++..++.|++.||.|||+.+ ++||||||+||+++.++ .++|+|||++...... ....++..|+|||+
T Consensus 108 ~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-------~~~~~~~~y~aPE~ 177 (267)
T PHA03390 108 EAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-------SCYDGTLDYFSPEK 177 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-------ccCCCCCcccChhh
Confidence 9999999999999999999855 99999999999999988 9999999998755322 12357889999999
Q ss_pred cccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHH
Q 042486 516 LENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLI 595 (635)
Q Consensus 516 ~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li 595 (635)
+.+..++.++||||||+++|||++|+.||.....+......+... ... ....+...+..+.+++
T Consensus 178 ~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------------~~~--~~~~~~~~~~~~~~li 241 (267)
T PHA03390 178 IKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR--------------QQK--KLPFIKNVSKNANDFV 241 (267)
T ss_pred hcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh--------------hcc--cCCcccccCHHHHHHH
Confidence 998889999999999999999999999986433222111111110 000 0112224556689999
Q ss_pred HHhhhcCCCCCCC-HHHHHHH
Q 042486 596 ESCLKKDPSGRPA-MDKIAQS 615 (635)
Q Consensus 596 ~~cl~~dP~~RPs-~~evl~~ 615 (635)
.+||+.||.+||+ ++|++++
T Consensus 242 ~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 242 QSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred HHHhccChhhCCchHHHHhcC
Confidence 9999999999996 6988864
No 303
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.98 E-value=8.8e-32 Score=275.32 Aligned_cols=241 Identities=27% Similarity=0.352 Sum_probs=186.4
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|+||++.. +++.+|+|.+.. .+.+|+++|++++|+||+++++.+...+..|+||||+++++|.+++..
T Consensus 7 g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 86 (277)
T cd05577 7 GEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYN 86 (277)
T ss_pred eeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHH
Confidence 89999986 688999998743 134689999999999999999999999999999999999999999966
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.....+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||.+....... ......++..
T Consensus 87 ~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~ 159 (277)
T cd05577 87 VGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK----KIKGRAGTPG 159 (277)
T ss_pred cCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCC----ccccccCCCC
Confidence 55445899999999999999999999855 9999999999999999999999999987553311 1223457789
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||.+.+..++.++||||||+++++|++|+.||......... ..+..... ......+...+.
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---------------~~~~~~~~-~~~~~~~~~~~~ 223 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK---------------EELKRRTL-EMAVEYPDKFSP 223 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH---------------HHHHhccc-cccccCCccCCH
Confidence 99999998888999999999999999999999998543221100 00000000 001122333456
Q ss_pred HHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHHhhcccccc
Q 042486 590 LVIRLIESCLKKDPSGRP-----AMDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~s~~w~~ 628 (635)
.+.+++.+||+.||.+|| ++.+++.+ .++ ..++|..
T Consensus 224 ~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h--~~~-~~~~~~~ 264 (277)
T cd05577 224 EAKDLCEALLQKDPEKRLGCRGGSADEVREH--PLF-KDLNWRR 264 (277)
T ss_pred HHHHHHHHHccCChhHccCCCcccHHHHHhC--hhh-hcCChhh
Confidence 689999999999999999 66666653 222 2355643
No 304
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.98 E-value=1.2e-31 Score=276.61 Aligned_cols=244 Identities=24% Similarity=0.324 Sum_probs=180.8
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecC--CeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNG--GNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. +++.+|+|.++. .+.+|++++++++|+||+++++++... +..|+||||+. ++|.+++.
T Consensus 19 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~ 97 (293)
T cd07843 19 GVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLME 97 (293)
T ss_pred eEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHH
Confidence 89999998 578999998853 235799999999999999999999877 78999999997 48988886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
.... .+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......... .....++.
T Consensus 98 ~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~ 170 (293)
T cd07843 98 TMKQ-PFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP---YTQLVVTL 170 (293)
T ss_pred hccC-CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCCccc---cccccccc
Confidence 5432 4899999999999999999999855 999999999999999999999999998865443211 12245688
Q ss_pred CccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc--h-----------hhhhhh
Q 042486 509 GYMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG--E-----------ESLRHL 574 (635)
Q Consensus 509 ~y~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~-----------~~l~~~ 574 (635)
.|+|||.+.+. ..+.++|+||||+++|||++|+.||........ ...... .+..... . ......
T Consensus 171 ~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (293)
T cd07843 171 WYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ-LNKIFK-LLGTPTEKIWPGFSELPGAKKKTFTKY 248 (293)
T ss_pred cccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHH-HhCCCchHHHHHhhccchhcccccccc
Confidence 89999988754 468899999999999999999998865432211 111100 0000000 0 000000
Q ss_pred cCCcCCCCCChH-HHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 575 MDPSMQGNYPPV-TAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 575 ~d~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
....+...++.. ....+.+++.+||+.||++|||+.|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 249 PYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred cchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 011111122222 35668999999999999999999999865
No 305
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=1.7e-31 Score=271.17 Aligned_cols=230 Identities=21% Similarity=0.276 Sum_probs=180.7
Q ss_pred ceEEEeee--CCcEEEEEEecc------------ChHHHHHHHhhhccCCcccEEEEEecC--CeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG------------DASDQIKLLNKINHSSLIRLLGICFNG--GNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~------------~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~ 425 (635)
|.||++.. ++..||+|.+.. .+.+|++++++++|+||+++++++.+. +..++++||+++++|.+
T Consensus 16 g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~ 95 (264)
T cd06653 16 GEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKD 95 (264)
T ss_pred eEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHH
Confidence 79999987 688999998631 245689999999999999999998754 45789999999999999
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++.... .+++.....++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++................
T Consensus 96 ~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 170 (264)
T cd06653 96 QLKAYG--ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVT 170 (264)
T ss_pred HHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccC
Confidence 986543 3789999999999999999999855 99999999999999999999999999986532211111112346
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
++..|+|||.+.+..++.++|+||||++++||++|+.||...... +...+..........+.
T Consensus 171 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------------------~~~~~~~~~~~~~~~p~ 232 (264)
T cd06653 171 GTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM------------------AAIFKIATQPTKPMLPD 232 (264)
T ss_pred CcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH------------------HHHHHHHcCCCCCCCCc
Confidence 888999999998888899999999999999999999997532111 11111111111223445
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.....+.+++.+||. +|..||++.+++.|
T Consensus 233 ~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 233 GVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 566679999999999 57999999998865
No 306
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=5.7e-32 Score=273.69 Aligned_cols=240 Identities=25% Similarity=0.367 Sum_probs=186.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.+++|.+..+ +.+|++++++++|+||+++++.+..++..|++|||+++++|.+++.+
T Consensus 7 ~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 86 (265)
T cd05579 7 GRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLEN 86 (265)
T ss_pred eEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHH
Confidence 89999998 4899999988542 44688999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc-----eeeeccc
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE-----FALTSHI 504 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~ 504 (635)
.. .+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++......... .......
T Consensus 87 ~~--~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~ 161 (265)
T cd05579 87 VG--SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRI 161 (265)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCc
Confidence 44 4899999999999999999999854 999999999999999999999999998754332110 0112334
Q ss_pred ccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
.++..|++||.......+.++||||||+++++|++|+.|+.....+.. ...+..... ..+
T Consensus 162 ~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~------------------~~~~~~~~~--~~~ 221 (265)
T cd05579 162 VGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI------------------FQNILNGKI--EWP 221 (265)
T ss_pred ccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH------------------HHHHhcCCc--CCC
Confidence 678899999999888889999999999999999999999854332211 111111000 011
Q ss_pred hH--HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcccc
Q 042486 585 PV--TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAW 626 (635)
Q Consensus 585 ~~--~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w 626 (635)
.. .+..+.+++.+||+.+|++||++.++.+.|+.-.-+.++|
T Consensus 222 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 222 EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence 11 2456899999999999999999966666555433345555
No 307
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=9.2e-32 Score=277.65 Aligned_cols=228 Identities=24% Similarity=0.385 Sum_probs=182.5
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||++.. +++.||+|.+.. .+.+|+.++++++|||++++++.+...+..++|+||+++++|.+++.+.
T Consensus 33 g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-- 110 (293)
T cd06647 33 GTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-- 110 (293)
T ss_pred eEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc--
Confidence 89999986 678999998753 2457899999999999999999999999999999999999999998653
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........ ......++..|+|
T Consensus 111 -~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~~y~~ 183 (293)
T cd06647 111 -CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSTMVGTPYWMA 183 (293)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc---ccccccCChhhcC
Confidence 2789999999999999999999854 99999999999999999999999998875443221 1223468889999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
||.+....++.++|+||||+++|+|++|+.||......... . ... ..+......+...+..+.
T Consensus 184 PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-~----~~~------------~~~~~~~~~~~~~~~~l~ 246 (293)
T cd06647 184 PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-Y----LIA------------TNGTPELQNPEKLSAIFR 246 (293)
T ss_pred chhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe-e----ehh------------cCCCCCCCCccccCHHHH
Confidence 99998888899999999999999999999998543221100 0 000 000001111223445688
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHH
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+++.+||+.+|++||++++++.+
T Consensus 247 ~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 247 DFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999977
No 308
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=1.2e-31 Score=275.57 Aligned_cols=230 Identities=27% Similarity=0.394 Sum_probs=183.6
Q ss_pred ceEEEeee--CCcEEEEEEecc------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK 433 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~ 433 (635)
|.||++.. ++..+++|.+.. .+.+|++++++++|+|++++++.+..++..++++||+++++|.+++.... .
T Consensus 33 ~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~ 111 (286)
T cd06614 33 GEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNF-V 111 (286)
T ss_pred eEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhc-c
Confidence 89999998 488999998864 35679999999999999999999999999999999999999999997654 3
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCc
Q 042486 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAP 513 (635)
Q Consensus 434 ~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP 513 (635)
.+++..+..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++........ ......++..|++|
T Consensus 112 ~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~y~~P 185 (286)
T cd06614 112 RMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS---KRNSVVGTPYWMAP 185 (286)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh---hhccccCCcccCCH
Confidence 499999999999999999999984 499999999999999999999999998865433221 11224577899999
Q ss_pred cccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHH
Q 042486 514 EYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIR 593 (635)
Q Consensus 514 E~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~ 593 (635)
|.+.+..++.++|+||||+++|+|++|+.|+......... ...... .......+...+..+.+
T Consensus 186 E~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~l~~ 248 (286)
T cd06614 186 EVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL-FLITTK----------------GIPPLKNPEKWSPEFKD 248 (286)
T ss_pred hHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhc----------------CCCCCcchhhCCHHHHH
Confidence 9998888999999999999999999999987533221111 000000 00000111123456899
Q ss_pred HHHHhhhcCCCCCCCHHHHHHH
Q 042486 594 LIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 594 li~~cl~~dP~~RPs~~evl~~ 615 (635)
++.+||+.+|.+||++.+++++
T Consensus 249 li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 249 FLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HHHHHhccChhhCcCHHHHhhC
Confidence 9999999999999999999874
No 309
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=2.2e-31 Score=277.97 Aligned_cols=232 Identities=28% Similarity=0.388 Sum_probs=182.1
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. ++..+|+|++.. ++.+|++++++++|+|++++++++.+++..++||||+. |+|.+++..
T Consensus 39 ~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~ 117 (317)
T cd06635 39 GAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-GSASDLLEV 117 (317)
T ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-CCHHHHHHH
Confidence 79999987 678999998752 24578999999999999999999999999999999996 578777754
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. ..+++.++..++.+++.||.|||+.+ ++||||+|+||+++.++.+||+|||++...... ....++..
T Consensus 118 ~~-~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~ 186 (317)
T cd06635 118 HK-KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPA-------NSFVGTPY 186 (317)
T ss_pred hc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCc-------ccccCCcc
Confidence 33 34899999999999999999999854 999999999999999999999999998654322 22467889
Q ss_pred ccCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 510 YMAPEYLE---NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 510 y~aPE~~~---~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
|+|||++. .+.++.++||||||+++|||++|+.|+....... .... +............
T Consensus 187 y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~-----------------~~~~~~~~~~~~~ 248 (317)
T cd06635 187 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYH-----------------IAQNESPTLQSNE 248 (317)
T ss_pred ccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHH-----------------HHhccCCCCCCcc
Confidence 99999874 4568899999999999999999999875322111 1111 1111111111223
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
.+..+.+++.+||+.+|.+||++.++++++-.+....
T Consensus 249 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 249 WSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred ccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 4456899999999999999999999999876554443
No 310
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=1.7e-31 Score=272.96 Aligned_cols=227 Identities=25% Similarity=0.445 Sum_probs=180.1
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhc---cCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKIN---HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. +++.+|+|.++. ++.+|+.++++++ |+|++++++++..+...++||||+++++|.+++.
T Consensus 15 g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 94 (277)
T cd06917 15 GAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMK 94 (277)
T ss_pred ceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHH
Confidence 89999997 688999998753 2457888999996 9999999999999999999999999999999986
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
.. .+++...+.++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........ ......|+.
T Consensus 95 ~~---~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~ 165 (277)
T cd06917 95 AG---PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS---KRSTFVGTP 165 (277)
T ss_pred cc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc---ccccccCCc
Confidence 53 4899999999999999999999855 99999999999999999999999999876543321 122346888
Q ss_pred CccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 509 GYMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 509 ~y~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
.|+|||.+.++ .++.++|+||||+++|+|++|+.||....... ..... .....+.+... ..
T Consensus 166 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--~~~~~-------------~~~~~~~~~~~---~~ 227 (277)
T cd06917 166 YWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR--AMMLI-------------PKSKPPRLEDN---GY 227 (277)
T ss_pred ceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh--hhhcc-------------ccCCCCCCCcc---cC
Confidence 99999988754 46889999999999999999999985322111 00000 00001111111 13
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+.+++.+||+.||++||++.|++++
T Consensus 228 ~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 228 SKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 4568999999999999999999999875
No 311
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=2.1e-31 Score=273.14 Aligned_cols=244 Identities=25% Similarity=0.380 Sum_probs=180.6
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|+. ++..||||.++. .+.+|++++++++|+||+++++++.+.+..++||||+++ +|.+++....
T Consensus 14 ~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~ 92 (284)
T cd07836 14 ATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHG 92 (284)
T ss_pred eEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcC
Confidence 89999998 688999998753 234799999999999999999999999999999999985 8888885433
Q ss_pred -CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 432 -GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 432 -~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++........ ......++..|
T Consensus 93 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y 166 (284)
T cd07836 93 VRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN---TFSNEVVTLWY 166 (284)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc---ccccccccccc
Confidence 235899999999999999999999854 99999999999999999999999999875433211 11224568899
Q ss_pred cCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcC-CcCCCC------
Q 042486 511 MAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD-PSMQGN------ 582 (635)
Q Consensus 511 ~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d-~~~~~~------ 582 (635)
++||.+.+ ..++.++||||||+++|+|++|+.||...+..+. ....... ..... ......+.+ +.....
T Consensus 167 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd07836 167 RAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ-LLKIFRI-MGTPT-ESTWPGISQLPEYKPTFPRYPP 243 (284)
T ss_pred cChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHH-hCCCC-hhhHHHHhcCchhcccccCCCh
Confidence 99998865 4568899999999999999999998865433221 1111110 00000 000000000 000000
Q ss_pred -----CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 583 -----YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 583 -----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+..+..+.+++.+|++.||.+||++.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 244 QDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred HHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 111234568899999999999999999999864
No 312
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=3.2e-31 Score=265.70 Aligned_cols=229 Identities=26% Similarity=0.453 Sum_probs=184.4
Q ss_pred ceEEEeee--CCcEEEEEEeccC-------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD-------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~-------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||++.. ++..+++|++... +.+|++++++++|+|++++++++..++..++++||+++++|.+++....
T Consensus 14 ~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~- 92 (253)
T cd05122 14 GEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTN- 92 (253)
T ss_pred eEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcC-
Confidence 89999998 5889999988543 5579999999999999999999999999999999999999999986543
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
..+++..+..++.+++.||.+||+. +++||||+|+||++++++.++|+|||.+........ .....++..|+|
T Consensus 93 ~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~ 165 (253)
T cd05122 93 QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA----RNTMVGTPYWMA 165 (253)
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc----ccceecCCcccC
Confidence 3489999999999999999999984 499999999999999999999999999876654321 233568889999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
||.+.....+.++|+||||+++++|++|+.|+...+....... ... ..-+.. ..+...+..+.
T Consensus 166 PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~-------------~~~~~~--~~~~~~~~~~~ 228 (253)
T cd05122 166 PEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK--IAT-------------NGPPGL--RNPEKWSDEFK 228 (253)
T ss_pred HHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH--HHh-------------cCCCCc--CcccccCHHHH
Confidence 9999888899999999999999999999998764322111100 000 000000 01111245689
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHH
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+++.+||+.||++|||+.|++++
T Consensus 229 ~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 229 DFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HHHHHHccCChhhCCCHHHHhcC
Confidence 99999999999999999999875
No 313
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=8.1e-32 Score=277.01 Aligned_cols=233 Identities=22% Similarity=0.338 Sum_probs=177.7
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcchhh---
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI--- 427 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l--- 427 (635)
|.||+++. +++.+|+|.+.. .+.+|+.++.++. |+||+++++++..++..+++|||+.. +|.++.
T Consensus 18 g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~ 96 (288)
T cd06616 18 GTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYV 96 (288)
T ss_pred eEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHH
Confidence 89999988 678999998853 2456888999996 99999999999998899999999864 555443
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
.......+++..+..++.+++.||+|||+. .+++||||||+||+++.++.+||+|||+++...... ......++
T Consensus 97 ~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~ 170 (288)
T cd06616 97 YEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI----AKTRDAGC 170 (288)
T ss_pred HHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC----ccccccCc
Confidence 222334589999999999999999999972 359999999999999999999999999987543221 11223578
Q ss_pred CCccCccccccC---CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 508 KGYMAPEYLENG---LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 508 ~~y~aPE~~~~~---~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
..|+|||.+.+. .++.++||||||+++|||++|+.||....... +........ ..+.+....+
T Consensus 171 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~----------~~~~~~~~~~ 236 (288)
T cd06616 171 RPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVF----DQLTQVVKG----------DPPILSNSEE 236 (288)
T ss_pred cCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHH----HHHhhhcCC----------CCCcCCCcCC
Confidence 899999998765 68999999999999999999999985432111 111110000 0111111222
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 585 PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 585 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+..+.+|+.+||+.||++||+++||+++
T Consensus 237 ~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 237 REFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2345568999999999999999999999987
No 314
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=1.1e-31 Score=279.64 Aligned_cols=249 Identities=24% Similarity=0.307 Sum_probs=180.0
Q ss_pred ceEEEeee----CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecC--CeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI----GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNG--GNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~----~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~ 425 (635)
|.||+|+. ++..||+|.+.. ...+|+.++++++||||+++++++.+. +..++||||+++ +|.+
T Consensus 14 g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 92 (316)
T cd07842 14 GRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQ 92 (316)
T ss_pred EEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHH
Confidence 89999998 468999999876 245799999999999999999999987 789999999975 6766
Q ss_pred hhccc---CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC----CCcEEEeeecCcccccccCCce
Q 042486 426 WINDK---GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT----DFRAKIANFALARPAERQEGEF 498 (635)
Q Consensus 426 ~l~~~---~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~----~~~~kl~Dfg~a~~~~~~~~~~ 498 (635)
++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++. ++.+||+|||++..........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 169 (316)
T cd07842 93 IIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPL 169 (316)
T ss_pred HHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccc
Confidence 66321 2235899999999999999999999854 999999999999999 9999999999998654432211
Q ss_pred eeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchh--------hHHHHhhhcccccCCch-
Q 042486 499 ALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN--------MLLVDVLNPVLHKEDGE- 568 (635)
Q Consensus 499 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~--------~~l~~~~~~~~~~~~~~- 568 (635)
.......++..|+|||.+.+ ..++.++||||||+++++|++|+.||.....+. ..+...+.. +......
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~ 248 (316)
T cd07842 170 ADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV-LGTPTEKD 248 (316)
T ss_pred cccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH-hCCCchhH
Confidence 22233567889999998765 457899999999999999999999986543321 011111110 0000000
Q ss_pred -hh------hhhhcCCcCCCCCC-----------hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 569 -ES------LRHLMDPSMQGNYP-----------PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 569 -~~------l~~~~d~~~~~~~~-----------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.. .....+......++ ...+..+.+++.+||+.||++|||+.|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 249 WPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00 00000000000111 0233458899999999999999999999865
No 315
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=2.2e-31 Score=273.74 Aligned_cols=228 Identities=21% Similarity=0.365 Sum_probs=181.5
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||++.. +++.+++|++.. .+.+|+.++++++|+||+++++++..++..++++||+++++|.+++...
T Consensus 33 g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-- 110 (285)
T cd06648 33 GIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHT-- 110 (285)
T ss_pred eEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhC--
Confidence 89999986 678999998743 2457899999999999999999999999999999999999999998662
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
.+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||.+........ ......|+..|+|
T Consensus 111 -~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~a 183 (285)
T cd06648 111 -RMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP---RRKSLVGTPYWMA 183 (285)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCc---ccccccCCccccC
Confidence 3899999999999999999999855 99999999999999999999999998865433211 1223468899999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
||.+.+..++.++||||||+++|||++|+.|+....... .... +.....+... .+...+..+.
T Consensus 184 PE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~--~~~~-------------~~~~~~~~~~--~~~~~~~~l~ 246 (285)
T cd06648 184 PEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ--AMKR-------------IRDNLPPKLK--NLHKVSPRLR 246 (285)
T ss_pred HHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH--HHHH-------------HHhcCCCCCc--ccccCCHHHH
Confidence 999988889999999999999999999999875322111 0000 0000001111 1112345689
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHH
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+++.+||+.+|++||++.+++++
T Consensus 247 ~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 247 SFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred HHHHHHcccChhhCcCHHHHccC
Confidence 99999999999999999999974
No 316
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=2e-31 Score=274.96 Aligned_cols=245 Identities=25% Similarity=0.320 Sum_probs=177.3
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhc-cCCcccEEEEEecCCe-----eEEEeecccCCCcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKIN-HSSLIRLLGICFNGGN-----WYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~-----~~lV~E~~~~gsL~ 424 (635)
|.||+|.. +++.||||+.+. .+.+|+.++++++ |+||+++++++...+. .|+||||+++ +|.
T Consensus 15 g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~ 93 (295)
T cd07837 15 GKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLK 93 (295)
T ss_pred eEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHH
Confidence 89999987 688999998753 2457999999995 6999999999986655 7999999985 888
Q ss_pred hhhcccC---CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC-CCcEEEeeecCcccccccCCceee
Q 042486 425 VWINDKG---GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-DFRAKIANFALARPAERQEGEFAL 500 (635)
Q Consensus 425 ~~l~~~~---~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~ 500 (635)
+++.... ...+++..+..++.||+.||.|||+. +++||||+|+||+++. ++.+||+|||++........ .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~---~ 167 (295)
T cd07837 94 KFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVK---S 167 (295)
T ss_pred HHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecccceecCCCcc---c
Confidence 8874322 24589999999999999999999985 4999999999999998 89999999999875433211 1
Q ss_pred ecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCch-----hhhhhh
Q 042486 501 TSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE-----ESLRHL 574 (635)
Q Consensus 501 ~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~-----~~l~~~ 574 (635)
.....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||...+... .+....... ...... ......
T Consensus 168 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 245 (295)
T cd07837 168 YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLL-GTPTEQVWPGVSKLRDW 245 (295)
T ss_pred cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHh-CCCChhhCcchhhccch
Confidence 122356788999998865 457899999999999999999998886433221 111111100 000000 000000
Q ss_pred c-CCcCC----CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 575 M-DPSMQ----GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 575 ~-d~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
. .+... ....+..+..+.++|.+||..||.+||+++|++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 246 HEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 00000 00011244568999999999999999999999865
No 317
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=2e-31 Score=273.07 Aligned_cols=227 Identities=20% Similarity=0.313 Sum_probs=175.4
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHh---hhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLN---KINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~---~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+++. +++.+|+|.+... ..+|..+++ ..+|+||+.+.+.+..++..++||||+++|+|.++
T Consensus 8 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 87 (279)
T cd05633 8 GEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYH 87 (279)
T ss_pred eEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHH
Confidence 89999987 6789999987542 123333333 34799999999999999999999999999999999
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g 506 (635)
+.... .+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....... .....|
T Consensus 88 i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-----~~~~~~ 157 (279)
T cd05633 88 LSQHG--VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-----PHASVG 157 (279)
T ss_pred HHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC-----ccCcCC
Confidence 86543 3899999999999999999999855 9999999999999999999999999986543221 122468
Q ss_pred CCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 507 TKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 507 t~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
+..|+|||.+.+ ..++.++|||||||++|||++|+.||.......... +.... .......+.
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----------------~~~~~-~~~~~~~~~ 220 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----------------IDRMT-LTVNVELPD 220 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH----------------HHHHh-hcCCcCCcc
Confidence 999999998864 557899999999999999999999985432211110 00000 001112233
Q ss_pred HHHHHHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
..+..+.+++.+||..||++|| +++|++++
T Consensus 221 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 221 SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 4456689999999999999999 59988876
No 318
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=1.7e-31 Score=275.50 Aligned_cols=245 Identities=26% Similarity=0.342 Sum_probs=178.2
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+|+. +++.||+|++.. .+.+|++++++++|+||+++++++.+++..++||||++ ++|.+++...
T Consensus 16 ~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~ 94 (294)
T PLN00009 16 GVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSS 94 (294)
T ss_pred EEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhC
Confidence 89999987 678999998743 24579999999999999999999999999999999995 5888887554
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC-CCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-DFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
....+++.....++.||+.||+|||+. +++|+||+|+||+++. ++.+||+|||++........ ......++..
T Consensus 95 ~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~ 168 (294)
T PLN00009 95 PDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR---TFTHEVVTLW 168 (294)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc---ccccCceeec
Confidence 444468888899999999999999984 4999999999999985 56799999999975432211 1123456889
Q ss_pred ccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC-----chhhhhhhcC--CcCCC
Q 042486 510 YMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED-----GEESLRHLMD--PSMQG 581 (635)
Q Consensus 510 y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~-----~~~~l~~~~d--~~~~~ 581 (635)
|+|||.+.+ ..++.++||||||+++|+|+||+.||......+. ...... ...... ....+..... +....
T Consensus 169 y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (294)
T PLN00009 169 YRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE-LFKIFR-ILGTPNEETWPGVTSLPDYKSAFPKWPP 246 (294)
T ss_pred ccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH-HhCCCChhhccccccchhhhhhcccCCC
Confidence 999998865 4578999999999999999999998864332221 111110 000000 0000000000 00000
Q ss_pred ----CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 582 ----NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 582 ----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+..+..+.+++.+|++.||++||++.+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 247 KDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred CCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0112234558899999999999999999999975
No 319
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.2e-31 Score=267.94 Aligned_cols=214 Identities=18% Similarity=0.147 Sum_probs=172.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC--hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCCH
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD--ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDW 437 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~--~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~ 437 (635)
|.||+++. +++.+|+|+++.. ..+|...+....||||+++++++.+.+..+++|||+++|+|.+++.... .+++
T Consensus 7 ~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~ 84 (237)
T cd05576 7 DKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL--NIPE 84 (237)
T ss_pred ceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhc--CCCH
Confidence 88999987 7889999999764 4556666666689999999999999999999999999999999986543 3899
Q ss_pred HHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccc
Q 042486 438 AQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLE 517 (635)
Q Consensus 438 ~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 517 (635)
..+..++.|++.||.|||+. +++||||||+||+++.++.++++|||.+....... ....++..|+|||...
T Consensus 85 ~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~------~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 85 ECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC------DGEAVENMYCAPEVGG 155 (237)
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc------ccCCcCccccCCcccC
Confidence 99999999999999999985 49999999999999999999999999876543321 1234567899999998
Q ss_pred cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHH
Q 042486 518 NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIES 597 (635)
Q Consensus 518 ~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~ 597 (635)
...++.++||||+|+++|||++|+.|+...... . ........+...+..+.+++.+
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----------~-------------~~~~~~~~~~~~~~~~~~li~~ 211 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSG-----------I-------------NTHTTLNIPEWVSEEARSLLQQ 211 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----------c-------------ccccccCCcccCCHHHHHHHHH
Confidence 888899999999999999999999765321100 0 0000011233344568999999
Q ss_pred hhhcCCCCCCCHH
Q 042486 598 CLKKDPSGRPAMD 610 (635)
Q Consensus 598 cl~~dP~~RPs~~ 610 (635)
||+.||++||++.
T Consensus 212 ~l~~dp~~R~~~~ 224 (237)
T cd05576 212 LLQFNPTERLGAG 224 (237)
T ss_pred HccCCHHHhcCCC
Confidence 9999999999973
No 320
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=2.6e-31 Score=268.96 Aligned_cols=238 Identities=24% Similarity=0.304 Sum_probs=179.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHHH-HhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKL-LNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||++.. +++.||+|.++.. +..|..+ ....+|+|++++++++..++..|+|+||+++++|.+++.
T Consensus 10 ~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 89 (260)
T cd05611 10 GSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIK 89 (260)
T ss_pred eeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHH
Confidence 89999987 6789999988542 1123333 334589999999999999999999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||+++.... .....++.
T Consensus 90 ~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-------~~~~~~~~ 157 (260)
T cd05611 90 TLG--GLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-------NKKFVGTP 157 (260)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-------cccCCCCc
Confidence 543 3899999999999999999999854 99999999999999999999999999875432 12345788
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||.+.+..++.++||||||+++|||++|..|+........ ....... ............+
T Consensus 158 ~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~---------------~~~~~~~~~~~~~ 221 (260)
T cd05611 158 DYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV-FDNILSR---------------RINWPEEVKEFCS 221 (260)
T ss_pred CccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhc---------------ccCCCCcccccCC
Confidence 99999999888889999999999999999999999854322211 1000000 0000111112234
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhccccc
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWE 627 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w~ 627 (635)
..+.+++.+||+.||++||++.++.+.|+.-.-....|+
T Consensus 222 ~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 222 PEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINWD 260 (260)
T ss_pred HHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCCC
Confidence 568999999999999999977655554444333445553
No 321
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=4.4e-31 Score=265.83 Aligned_cols=231 Identities=27% Similarity=0.398 Sum_probs=187.2
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecC--CeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNG--GNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. +++.|++|.+... +.+|++++++++|+||+++++.+... +..++++||+++++|.+++.
T Consensus 14 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 93 (260)
T cd06606 14 GSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLK 93 (260)
T ss_pred eEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHH
Confidence 89999998 4889999987543 45789999999999999999999988 88999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... .+++..+..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||.+......... .......++.
T Consensus 94 ~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~ 167 (260)
T cd06606 94 KFG--KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG-EGTGSVRGTP 167 (260)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccccc-ccccCCCCCc
Confidence 554 489999999999999999999984 4999999999999999999999999998866543211 0123356888
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||.+.....+.++||||||+++++|++|+.||........... ...........+...+
T Consensus 168 ~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~ 230 (260)
T cd06606 168 YWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALY-----------------KIGSSGEPPEIPEHLS 230 (260)
T ss_pred cccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH-----------------hccccCCCcCCCcccC
Confidence 99999999888899999999999999999999999865432111111 1111111122333446
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+.+++.+|++.||++||++.|++++
T Consensus 231 ~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 231 EEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 679999999999999999999999875
No 322
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=2.3e-31 Score=268.21 Aligned_cols=227 Identities=29% Similarity=0.413 Sum_probs=184.2
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+++. ++..+|+|.+.. ++.+|++++++++|+||+++++++.+....++||||+++++|.+++...
T Consensus 14 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~ 93 (256)
T cd08530 14 GSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKR 93 (256)
T ss_pred eeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHH
Confidence 78999977 678999998753 2457889999999999999999999999999999999999999998542
Q ss_pred --CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 431 --GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 431 --~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
....+++..++.++.+++.||.|||+.+ ++|+||+|+||++++++.+||+|||++...... ......++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~ 165 (256)
T cd08530 94 KKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----MAKTQIGTP 165 (256)
T ss_pred HhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-----CcccccCCc
Confidence 2245899999999999999999999855 999999999999999999999999998766443 122345788
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|++||.+.+..++.++|+||||+++|||++|+.|+...+.... ... ... ......+...+
T Consensus 166 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~--~~~----------------~~~-~~~~~~~~~~~ 226 (256)
T cd08530 166 HYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL--RYK----------------VQR-GKYPPIPPIYS 226 (256)
T ss_pred cccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHH----------------Hhc-CCCCCCchhhC
Confidence 99999999988899999999999999999999999864332211 000 000 11112223455
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+.+++.+||..+|++||++.|++++
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 227 QDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 668999999999999999999999875
No 323
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=1e-31 Score=271.65 Aligned_cols=227 Identities=27% Similarity=0.336 Sum_probs=182.6
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. ++..+|+|.+.. .+.+|++++++++||||+++++.+.+++..++|+||+.+++|.+++..
T Consensus 14 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 93 (258)
T cd05578 14 GKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQ 93 (258)
T ss_pred ceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHh
Confidence 79999998 588999998853 245789999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||.+....... ......++..
T Consensus 94 ~--~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~~ 164 (258)
T cd05578 94 K--VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT----LTTSTSGTPG 164 (258)
T ss_pred c--CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc----cccccCCChh
Confidence 4 34899999999999999999999854 9999999999999999999999999987654332 1223467889
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||.+.+..++.++|+||||+++|+|++|+.|+......... ... ..... .....+...+.
T Consensus 165 y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---~~~-------------~~~~~-~~~~~~~~~~~ 227 (258)
T cd05578 165 YMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRD---QIR-------------AKQET-ADVLYPATWST 227 (258)
T ss_pred hcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHH---HHH-------------HHhcc-ccccCcccCcH
Confidence 99999998888999999999999999999999998643321100 000 00000 11122333456
Q ss_pred HHHHHHHHhhhcCCCCCCCH--HHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAM--DKIAQ 614 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~--~evl~ 614 (635)
.+.+++.+||+.||.+||++ +|+++
T Consensus 228 ~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 228 EAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred HHHHHHHHHccCChhHcCCccHHHHhc
Confidence 78999999999999999999 66653
No 324
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=1.2e-31 Score=282.46 Aligned_cols=260 Identities=25% Similarity=0.361 Sum_probs=185.5
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecC-----CeeE
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNG-----GNWY 412 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~ 412 (635)
++|.....+| |.||+|+. ++..||||++.. .+.+|+.++++++|+||+++++++... ...+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 3444444444 89999987 688999998753 245699999999999999999987644 3579
Q ss_pred EEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccc
Q 042486 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492 (635)
Q Consensus 413 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 492 (635)
+++||+.+ +|.+++... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 85 lv~e~~~~-~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 85 IVQELMET-DLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEehhccc-CHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 99999964 777777442 3899999999999999999999855 9999999999999999999999999987654
Q ss_pred ccCCceeeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhh
Q 042486 493 RQEGEFALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESL 571 (635)
Q Consensus 493 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l 571 (635)
.............++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+... ....+...+..... +..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~--~~~~~~~~~~~~~~-~~~ 234 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH--QLNLILGVLGTPSQ-EDL 234 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcCCCCH-HHH
Confidence 32221112233568899999998654 568899999999999999999999885432211 11111111111111 111
Q ss_pred hhhcCCcC---------CCCC-----ChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH--HHHHHh
Q 042486 572 RHLMDPSM---------QGNY-----PPVTAILVIRLIESCLKKDPSGRPAMDKIAQS--ISRFLN 621 (635)
Q Consensus 572 ~~~~d~~~---------~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~~ 621 (635)
..+.+... .... .+..+..+.+++.+||+.||++||++.|++++ ++.+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 11111000 0000 01224558899999999999999999999998 555543
No 325
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=7.4e-31 Score=268.70 Aligned_cols=241 Identities=24% Similarity=0.347 Sum_probs=177.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC--------hHHHHHHHhhhc-cCCcccEEEEEecC--CeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD--------ASDQIKLLNKIN-HSSLIRLLGICFNG--GNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~--------~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. +++.+|+|+++.. ..+|+..+.++. |+|++++++++.++ +..++||||++ ++|.+++.
T Consensus 13 ~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~ 91 (282)
T cd07831 13 SEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIK 91 (282)
T ss_pred ceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHH
Confidence 89999987 6889999988653 135888888885 99999999999987 88999999996 58888875
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++. +.+||+|||+++....... .....++.
T Consensus 92 ~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~----~~~~~~~~ 162 (282)
T cd07831 92 GRK-RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP----YTEYISTR 162 (282)
T ss_pred hcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCCC----cCCCCCCc
Confidence 433 34899999999999999999999854 999999999999999 9999999999976543221 11245788
Q ss_pred CccCccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhh--------cCCcC
Q 042486 509 GYMAPEYLE-NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL--------MDPSM 579 (635)
Q Consensus 509 ~y~aPE~~~-~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~--------~d~~~ 579 (635)
.|+|||.+. ++.++.++|||||||++|||++|+.||...+..+ .............. +..... ..+..
T Consensus 163 ~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (282)
T cd07831 163 WYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD--QIAKIHDVLGTPDA-EVLKKFRKSRHMNYNFPSK 239 (282)
T ss_pred ccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH--HHHHHHHHcCCCCH-HHHHhhcccccccccCccc
Confidence 999999765 4557889999999999999999999886543221 11111111111110 000000 00000
Q ss_pred CC----CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 580 QG----NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 580 ~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.. ......+..+.+++.+||+.||++||++++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 240 KGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 0012345679999999999999999999999875
No 326
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=255.03 Aligned_cols=230 Identities=20% Similarity=0.348 Sum_probs=175.9
Q ss_pred ceEEEeee--CCcEEEEEEeccChH--------HHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGDAS--------DQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~~~--------~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+.+. +|...|||.+++.-. ..++++.+- ..|+||+.+|+|..+...++.||.|. ..++.++.+-
T Consensus 106 G~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C~ekLlkri 184 (391)
T KOG0983|consen 106 GQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-TCAEKLLKRI 184 (391)
T ss_pred cceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-HHHHHHHHHh
Confidence 89999998 679999999976422 223333333 37999999999999999999999884 3555555443
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
. +++++...-++...+.+||.||.+ ..+|+|||+||+|||+|+.|.+||||||.+-....... .....|.+.|
T Consensus 185 k-~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA----htrsAGC~~Y 257 (391)
T KOG0983|consen 185 K-GPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA----HTRSAGCAAY 257 (391)
T ss_pred c-CCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccc----cccccCCccc
Confidence 3 348888888999999999999987 35699999999999999999999999999875543321 2335788999
Q ss_pred cCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 511 MAPEYLE---NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 511 ~aPE~~~---~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
||||.+. ...|+.++||||||+.++||.||+.|+...+.+-..+...++.. .|.+.+. ...
T Consensus 258 MaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~e--------------PP~L~~~--~gF 321 (391)
T KOG0983|consen 258 MAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEE--------------PPLLPGH--MGF 321 (391)
T ss_pred cCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcC--------------CCCCCcc--cCc
Confidence 9999986 45789999999999999999999999876444433333322210 0111111 114
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+..+.+++..||..|+.+||...++++|
T Consensus 322 Sp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 322 SPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 5668999999999999999999999876
No 327
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=4.3e-31 Score=274.73 Aligned_cols=244 Identities=28% Similarity=0.359 Sum_probs=178.1
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecC--CeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNG--GNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. +++.||+|.++.+ ..+|+.++++++|+||+++++++.+. +..++||||+.+ +|.+++.
T Consensus 21 ~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~ 99 (309)
T cd07845 21 GIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLD 99 (309)
T ss_pred EEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHH
Confidence 89999988 6889999988532 34799999999999999999998754 468999999964 8888886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... ..+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......... .....++.
T Consensus 100 ~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~---~~~~~~~~ 172 (309)
T cd07845 100 NMP-TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP---MTPKVVTL 172 (309)
T ss_pred hcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCCccCC---CCcccccc
Confidence 433 34899999999999999999999955 999999999999999999999999998765432211 12234577
Q ss_pred CccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCch--hhhhh------hcCCcC
Q 042486 509 GYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE--ESLRH------LMDPSM 579 (635)
Q Consensus 509 ~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~--~~l~~------~~d~~~ 579 (635)
.|+|||.+.+ ..++.++||||||+++|||++|+.||...+... .+.... ......... ..+.. +..+..
T Consensus 173 ~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (309)
T cd07845 173 WYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLII-QLLGTPNESIWPGFSDLPLVGKFTLPKQ 250 (309)
T ss_pred cccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HhcCCCChhhchhhhcccccccccccCC
Confidence 8999998865 557899999999999999999999886433221 111111 111100000 00000 000000
Q ss_pred CCC----CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 580 QGN----YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 580 ~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
... .....+..+.+++.+||+.||++|||++|++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 251 PYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred CCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 001124557899999999999999999999976
No 328
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=5e-31 Score=265.48 Aligned_cols=229 Identities=27% Similarity=0.390 Sum_probs=185.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||++.. ++..+|+|++... +.+|++++++++|+|++++.+.+..++..++|+||+++++|.+++...
T Consensus 14 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 93 (258)
T cd08215 14 GKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQ 93 (258)
T ss_pred eEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHh
Confidence 89999998 4889999998642 457899999999999999999999999999999999999999999654
Q ss_pred C--CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 431 G--GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 431 ~--~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
. ...+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||.+....... .......+++
T Consensus 94 ~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~ 167 (258)
T cd08215 94 KKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV---DLAKTVVGTP 167 (258)
T ss_pred hccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc---ceecceeeee
Confidence 2 355999999999999999999999854 9999999999999999999999999987654432 1223356888
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|+|||.+.+..++.++|+||+|+++++|++|+.|+...+... ......... ....+...+
T Consensus 168 ~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------------------~~~~~~~~~-~~~~~~~~~ 228 (258)
T cd08215 168 YYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE------------------LALKILKGQ-YPPIPSQYS 228 (258)
T ss_pred cccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH------------------HHHHHhcCC-CCCCCCCCC
Confidence 9999999988889999999999999999999999875432111 000111110 111223345
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+.+++.+||..+|++||++.|++++
T Consensus 229 ~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 229 SELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 568999999999999999999999864
No 329
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=3.7e-31 Score=280.63 Aligned_cols=240 Identities=27% Similarity=0.327 Sum_probs=178.8
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecC------CeeEEEeecccCCCcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNG------GNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~lV~E~~~~gsL~ 424 (635)
|.||+++. +++.||||.+.. .+.+|+.++++++|+||+++++++... ...|+||||+. ++|.
T Consensus 30 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~ 108 (353)
T cd07850 30 GIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLC 108 (353)
T ss_pred EEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHH
Confidence 89999987 788999998853 234699999999999999999998643 34699999995 5888
Q ss_pred hhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccc
Q 042486 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504 (635)
Q Consensus 425 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 504 (635)
+++... +++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++...... .....
T Consensus 109 ~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~----~~~~~ 177 (353)
T cd07850 109 QVIQMD----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----MMTPY 177 (353)
T ss_pred HHHhhc----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccceeCCCCC----CCCCC
Confidence 877532 788999999999999999999854 9999999999999999999999999997654321 12234
Q ss_pred ccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc-----------------
Q 042486 505 VGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG----------------- 567 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~----------------- 567 (635)
.++..|+|||.+.+..++.++|||||||++|+|++|+.||...+... ........ +.....
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 255 (353)
T cd07850 178 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID-QWNKIIEQ-LGTPSDEFMSRLQPTVRNYVENR 255 (353)
T ss_pred cccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHh-cCCCCHHHHHHhhhhhhHHhhcC
Confidence 57889999999999899999999999999999999999986443211 11111110 000000
Q ss_pred ----hhhhhhhcC----CcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 568 ----EESLRHLMD----PSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 568 ----~~~l~~~~d----~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+..... +......+...+..+.+++.+||+.||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 256 PKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred CCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000001110 111111122345568899999999999999999999976
No 330
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=1e-30 Score=268.15 Aligned_cols=244 Identities=26% Similarity=0.374 Sum_probs=180.3
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhh---ccCCcccEEEEEecCCe-----eEEEeecccCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKI---NHSSLIRLLGICFNGGN-----WYLVYENAVNGS 422 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~-----~~lV~E~~~~gs 422 (635)
|.||+|+. ++..+|+|+++. .+.+|+.+++++ +|+|++++++++...+. .+++|||+. ++
T Consensus 13 ~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~ 91 (287)
T cd07838 13 GTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QD 91 (287)
T ss_pred eEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc-cC
Confidence 89999998 478999999863 234677777666 59999999999987766 899999996 48
Q ss_pred cchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeec
Q 042486 423 LSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTS 502 (635)
Q Consensus 423 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 502 (635)
|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++........ ..
T Consensus 92 l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~----~~ 164 (287)
T cd07838 92 LATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA----LT 164 (287)
T ss_pred HHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcceeccCCcc----cc
Confidence 988886544445899999999999999999999854 99999999999999999999999999876543221 12
Q ss_pred ccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc---------hhhhhh
Q 042486 503 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG---------EESLRH 573 (635)
Q Consensus 503 ~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~---------~~~l~~ 573 (635)
...++..|+|||.+.+..++.++|+||||+++|||++|+.|+......+ .+............. ......
T Consensus 165 ~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (287)
T cd07838 165 SVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-QLDKIFDVIGLPSEEEWPRNVSLPRSSFPS 243 (287)
T ss_pred cccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-HHHHHHHHcCCCChHhcCCCcccchhhccc
Confidence 2357888999999998889999999999999999999988876433221 111111111000000 000000
Q ss_pred hcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 574 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...... ..........+.+++.+||+.||++||+++|++.+
T Consensus 244 ~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 244 YTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred ccccch-hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 000000 11112345667899999999999999999999864
No 331
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=8.2e-31 Score=272.19 Aligned_cols=247 Identities=25% Similarity=0.361 Sum_probs=176.1
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCC--------eeEEEeecccCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGG--------NWYLVYENAVNGS 422 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~--------~~~lV~E~~~~gs 422 (635)
|.||+++. +++.||||.+..+ +.+|++++++++||||+++++++...+ ..++||||+.+ +
T Consensus 26 ~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~ 104 (310)
T cd07865 26 GEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-D 104 (310)
T ss_pred EEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCc-C
Confidence 89999987 6889999987432 346999999999999999999987543 35999999964 7
Q ss_pred cchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCce-eee
Q 042486 423 LSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF-ALT 501 (635)
Q Consensus 423 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~ 501 (635)
|.+++.... ..+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......... ...
T Consensus 105 l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 180 (310)
T cd07865 105 LAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRY 180 (310)
T ss_pred HHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCc
Confidence 888775443 24899999999999999999999854 9999999999999999999999999997654322110 111
Q ss_pred cccccCCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccc--------cCCchhhhh
Q 042486 502 SHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH--------KEDGEESLR 572 (635)
Q Consensus 502 ~~~~gt~~y~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~--------~~~~~~~l~ 572 (635)
....++..|+|||.+.+. .++.++||||||+++|||++|+.|+....... ....+..... .........
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
T cd07865 181 TNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH--QLTLISQLCGSITPEVWPGVDKLELFK 258 (310)
T ss_pred cCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChhhcccccchhhhh
Confidence 234577889999988654 46889999999999999999998876443221 1111111100 000000000
Q ss_pred hhcCCcCC-----C-CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 573 HLMDPSMQ-----G-NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 573 ~~~d~~~~-----~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+..+.-. . ..+......+.+++.+||..||.+||+++|++++
T Consensus 259 ~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 259 KMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00000000 0 0000123446799999999999999999999865
No 332
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=7.9e-31 Score=272.70 Aligned_cols=226 Identities=26% Similarity=0.379 Sum_probs=177.6
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+|+. ++..+|+|.+.. ++.+|++++++++|+|++++++++...+..++||||+. |+|.+++..
T Consensus 29 g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~ 107 (308)
T cd06634 29 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEV 107 (308)
T ss_pred EEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHH
Confidence 89999987 678999998742 24578999999999999999999999999999999996 688777743
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. ..+++..+..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....++..
T Consensus 108 ~~-~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~ 176 (308)
T cd06634 108 HK-KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-------NXFVGTPY 176 (308)
T ss_pred cC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc-------ccccCCcc
Confidence 33 34899999999999999999999854 999999999999999999999999998754322 22457889
Q ss_pred ccCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 510 YMAPEYLE---NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 510 y~aPE~~~---~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
|+|||.+. .+.++.++|||||||++|+|++|+.|+........ ..... ........+..
T Consensus 177 y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~-----------------~~~~~~~~~~~ 238 (308)
T cd06634 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIA-----------------QNESPALQSGH 238 (308)
T ss_pred ccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH-HHHHh-----------------hcCCCCcCccc
Confidence 99999874 35678899999999999999999988753221110 00110 00000111223
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.+..+.+++.+||+.+|++||++++++++-.
T Consensus 239 ~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 239 WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred ccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 4456899999999999999999999998744
No 333
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=1.4e-30 Score=271.50 Aligned_cols=224 Identities=27% Similarity=0.386 Sum_probs=176.4
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+|+. +++.|++|++.. ++.+|++++++++|+|++++++++.++...++||||+. |+|.+++..
T Consensus 35 g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~ 113 (313)
T cd06633 35 GAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEV 113 (313)
T ss_pred eEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHh
Confidence 89999987 688999998752 24578999999999999999999999999999999995 578777754
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. ..+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ....++..
T Consensus 114 ~~-~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~-------~~~~~~~~ 182 (313)
T cd06633 114 HK-KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSPA-------NSFVGTPY 182 (313)
T ss_pred cC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCCC-------CCcccccc
Confidence 33 34899999999999999999999854 999999999999999999999999998643221 23468889
Q ss_pred ccCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 510 YMAPEYLE---NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 510 y~aPE~~~---~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
|+|||++. .+.++.++||||||+++|||++|..|+...+..... .... ...........
T Consensus 183 y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~-~~~~-----------------~~~~~~~~~~~ 244 (313)
T cd06633 183 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-YHIA-----------------QNDSPTLQSNE 244 (313)
T ss_pred ccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHH-----------------hcCCCCCCccc
Confidence 99999984 456888999999999999999999987543221111 0000 00000011112
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+..+.+++.+||+.+|.+||++.+++.+
T Consensus 245 ~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 245 WTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 33458899999999999999999999976
No 334
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=9.7e-31 Score=268.23 Aligned_cols=245 Identities=28% Similarity=0.415 Sum_probs=180.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecC--CeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNG--GNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+|+. +++.+|+|++... +.+|++++++++|+|++++++++.+. +..++|+||+++ +|.+++.
T Consensus 13 ~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 91 (287)
T cd07840 13 GQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLD 91 (287)
T ss_pred eEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHh
Confidence 89999988 5789999998643 45799999999999999999999987 789999999975 8888886
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
... ..+++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++........ .......++.
T Consensus 92 ~~~-~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~ 165 (287)
T cd07840 92 SPE-VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS--ADYTNRVITL 165 (287)
T ss_pred ccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--cccccccccc
Confidence 543 34899999999999999999999854 99999999999999999999999999986644321 1112245678
Q ss_pred CccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCch--hhhhh---h--cCC---
Q 042486 509 GYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE--ESLRH---L--MDP--- 577 (635)
Q Consensus 509 ~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~--~~l~~---~--~d~--- 577 (635)
.|+|||.+.+ ..++.++||||||+++|||++|+.|+........ + ............. ..... . ..+
T Consensus 166 ~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (287)
T cd07840 166 WYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ-L-EKIFELCGSPTDENWPGVSKLPWFENLKPKKP 243 (287)
T ss_pred ccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH-H-HHHHHHhCCCchhhccccccchhhhhcccccc
Confidence 8999997764 4578999999999999999999998865432211 1 1111100000000 00000 0 000
Q ss_pred ---cCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 578 ---SMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 578 ---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+.......++..+.+++.+||+.+|.+||++++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 244 YKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred chhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000111125568999999999999999999999864
No 335
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=4.7e-31 Score=270.41 Aligned_cols=246 Identities=28% Similarity=0.393 Sum_probs=181.4
Q ss_pred ceEEEeee--CCcEEEEEEeccC--------hHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD--------ASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~--------~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+|+. +++.|+||++... ..+|+..+++++ |+|++++++++.+++..++||||+ +|+|.+++...
T Consensus 13 g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~ 91 (283)
T cd07830 13 GSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDR 91 (283)
T ss_pred eEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhc
Confidence 89999998 5789999988653 235888999998 999999999999999999999999 88999988665
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
....+++..+..++.|++.+|.|||+.+ ++|+||+|+||++++++.++|+|||++........ .....++..|
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~ 164 (283)
T cd07830 92 KGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP----YTDYVSTRWY 164 (283)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCC----cCCCCCcccc
Confidence 4445899999999999999999999854 99999999999999999999999999875543221 1224578899
Q ss_pred cCccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhH--HHHhhhcccccCCc-hhhhhhhcCCcCCC-----
Q 042486 511 MAPEYLE-NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENML--LVDVLNPVLHKEDG-EESLRHLMDPSMQG----- 581 (635)
Q Consensus 511 ~aPE~~~-~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~--l~~~~~~~~~~~~~-~~~l~~~~d~~~~~----- 581 (635)
+|||.+. ...++.++|+||||++++||++|+.||......... .............. ...+...++.....
T Consensus 165 ~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (283)
T cd07830 165 RAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTS 244 (283)
T ss_pred cCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccccccc
Confidence 9999875 455789999999999999999999887544322211 01111110000000 00000001100000
Q ss_pred --CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 582 --NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 582 --~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.........+.+++++||+.||++||+++|++.+
T Consensus 245 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 245 LHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred HHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0011114568999999999999999999999864
No 336
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=1e-30 Score=267.75 Aligned_cols=227 Identities=22% Similarity=0.326 Sum_probs=175.4
Q ss_pred ceEEEeee--CCcEEEEEEeccC----------hHHHHH---HHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD----------ASDQIK---LLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~---~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+++. +++.||+|.+... +.+|.. .++..+|++|+++.+++.+++..++||||+.+|+|.++
T Consensus 8 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~ 87 (278)
T cd05606 8 GEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYH 87 (278)
T ss_pred eEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHH
Confidence 89999887 6789999987532 123333 34445799999999999999999999999999999998
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVG 506 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g 506 (635)
+.... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... .....|
T Consensus 88 l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~ 157 (278)
T cd05606 88 LSQHG--VFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-----PHASVG 157 (278)
T ss_pred HHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC-----CcCcCC
Confidence 86543 4899999999999999999999854 9999999999999999999999999987543221 123468
Q ss_pred CCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 507 TKGYMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 507 t~~y~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
+..|+|||.+.++ .++.++||||||+++|||++|+.||............. ...... ...+.
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~-------------~~~~~~----~~~~~ 220 (278)
T cd05606 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR-------------MTLTMA----VELPD 220 (278)
T ss_pred CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH-------------HhhccC----CCCCC
Confidence 9999999998754 58899999999999999999999985432111100000 000011 12223
Q ss_pred HHHHHHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
..+..+.+++.+||..+|.+|| ++.|++++
T Consensus 221 ~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 221 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 3356689999999999999999 99999864
No 337
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=5.3e-32 Score=261.60 Aligned_cols=259 Identities=25% Similarity=0.297 Sum_probs=187.9
Q ss_pred CCCCCccc----ceEEEeee----C--CcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEec-CCeeEE
Q 042486 354 FNPSCWIK----GSVYRGKI----G--GDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFN-GGNWYL 413 (635)
Q Consensus 354 f~~~~~ig----g~Vy~g~~----~--~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~l 413 (635)
|...+.|| |.|||++. + ...+|||+++.+ .-+|+.+++.++|+|++.|..++.. +...+|
T Consensus 26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l 105 (438)
T KOG0666|consen 26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWL 105 (438)
T ss_pred hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEE
Confidence 44444454 89999965 2 237899999765 4589999999999999999999987 778899
Q ss_pred EeecccCCCcchhhcc---cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC----CcEEEeeec
Q 042486 414 VYENAVNGSLSVWIND---KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD----FRAKIANFA 486 (635)
Q Consensus 414 V~E~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~----~~~kl~Dfg 486 (635)
++||++. +|.+.++- ...+.++...+..|+.||+.|+.|||+.. |+||||||.|||+..+ |++||+|||
T Consensus 106 ~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 106 LFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred Eehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeeccc
Confidence 9999987 88888732 23356899999999999999999999955 9999999999999777 999999999
Q ss_pred CcccccccCCceeeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchh-------hHHHHhh
Q 042486 487 LARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN-------MLLVDVL 558 (635)
Q Consensus 487 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~-------~~l~~~~ 558 (635)
+++.....-.........+-|..|+|||.+.+ ..|+++.||||.||++.||+|-.+.|...+... .+..+.+
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 99987665444444456788999999999886 568999999999999999999987776543321 1111111
Q ss_pred hcccccCCc--hhhhhhhcCC---------cCCCCC--ChH------HHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 559 NPVLHKEDG--EESLRHLMDP---------SMQGNY--PPV------TAILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 559 ~~~~~~~~~--~~~l~~~~d~---------~~~~~~--~~~------~~~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
-.++..... ...+.++-+- ....+. ... -+..-.+|+..+|..||.+|.|+++.+++.
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 111111110 0111111000 000000 000 011257899999999999999999998873
No 338
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=9.5e-32 Score=258.81 Aligned_cols=233 Identities=21% Similarity=0.274 Sum_probs=185.4
Q ss_pred ceEEEeee--CCcEEEEEEecc--ChHHHHHHHhhh-ccCCcccEEEEEec----CCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--DASDQIKLLNKI-NHSSLIRLLGICFN----GGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--~~~~E~~~l~~l-~h~nIv~l~~~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.|-.+.. +++.+|+|.+.+ ..++|+++.-+. .|+|||.+++++.+ ...+.+|||.|+||.|...+++++.
T Consensus 76 GkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~ 155 (400)
T KOG0604|consen 76 GKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGD 155 (400)
T ss_pred CceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHccc
Confidence 77776654 788999999865 477899876655 69999999999874 3457899999999999999988888
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC---CCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT---DFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
..+++.+.-.|++||+.|+.|||+.. |.||||||+|+|... |-.+||+|||+|+...... .....+.|+.
T Consensus 156 ~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~----~L~TPc~TPy 228 (400)
T KOG0604|consen 156 QAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG----DLMTPCFTPY 228 (400)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccccccccCCCc----cccCCccccc
Confidence 88999999999999999999999965 999999999999954 5679999999998655321 2344688999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcC--CCCCChHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSM--QGNYPPVT 587 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~--~~~~~~~~ 587 (635)
|.|||++...+|+...|+||+||++|-|++|.+||......- +. . ..-+++..... ...-....
T Consensus 229 YvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a----------is-p---gMk~rI~~gqy~FP~pEWs~V 294 (400)
T KOG0604|consen 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA----------IS-P---GMKRRIRTGQYEFPEPEWSCV 294 (400)
T ss_pred ccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc----------CC-h---hHHhHhhccCccCCChhHhHH
Confidence 999999999999999999999999999999999986433210 00 0 11111222111 11122345
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+....++|+.+|..+|.+|.|++|++++
T Consensus 295 Se~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 295 SEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred HHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 6778999999999999999999999987
No 339
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=4.9e-31 Score=278.41 Aligned_cols=252 Identities=27% Similarity=0.388 Sum_probs=180.7
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecC------Ce
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNG------GN 410 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~ 410 (635)
++|.....|| |.||+|+. ++..||||++.. .+.+|+.++++++|+||+++++++... ..
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 4454444444 89999986 688999998853 245799999999999999999998754 34
Q ss_pred eEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccc
Q 042486 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490 (635)
Q Consensus 411 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 490 (635)
.++|+||+.. +|..++. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.
T Consensus 95 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 95 FYLVMPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred EEEEeccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 6999999864 6766652 23899999999999999999999855 99999999999999999999999999875
Q ss_pred ccccCCceeeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchh
Q 042486 491 AERQEGEFALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEE 569 (635)
Q Consensus 491 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 569 (635)
..... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...+... .+..... ..... ...
T Consensus 167 ~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~-~~~~~-~~~ 237 (342)
T cd07879 167 ADAEM------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK-VTGVP-GPE 237 (342)
T ss_pred CCCCC------CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-hcCCC-CHH
Confidence 43221 22456888999999876 468899999999999999999999986433211 1111111 00000 000
Q ss_pred hhhhhcC----------CcC-CCCC---ChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH--HHHHH
Q 042486 570 SLRHLMD----------PSM-QGNY---PPVTAILVIRLIESCLKKDPSGRPAMDKIAQS--ISRFL 620 (635)
Q Consensus 570 ~l~~~~d----------~~~-~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 620 (635)
....+.+ +.. .... .+..+..+.+++.+||+.||++||+++|++.+ ++.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0000000 000 0000 01123457899999999999999999999976 55543
No 340
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=5.5e-31 Score=270.90 Aligned_cols=244 Identities=20% Similarity=0.339 Sum_probs=190.1
Q ss_pred ceEEEeee-----CCcEEEEEEecc-----------ChHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcc
Q 042486 362 GSVYRGKI-----GGDFVAIKKVYG-----------DASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~-----~~~~vavK~~~~-----------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~ 424 (635)
|.||+++. +++.||||.++. .+.+|++++.++ +|+||+++++.+..++..++||||+++|+|.
T Consensus 14 ~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (288)
T cd05583 14 GKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELF 93 (288)
T ss_pred ceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHH
Confidence 78999875 467899998853 245789999999 6999999999999899999999999999999
Q ss_pred hhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccc
Q 042486 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504 (635)
Q Consensus 425 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 504 (635)
+++.... .+++..+..++.|++.+|.|||+. +++||||+|+||+++.++.++|+|||+++....... ......
T Consensus 94 ~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~ 166 (288)
T cd05583 94 THLYQRE--HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE--ERAYSF 166 (288)
T ss_pred HHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccccccccc--cccccc
Confidence 9986543 388999999999999999999984 499999999999999999999999999876543221 112234
Q ss_pred ccCCCccCccccccCC--CCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCC
Q 042486 505 VGTKGYMAPEYLENGL--VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGN 582 (635)
Q Consensus 505 ~gt~~y~aPE~~~~~~--~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~ 582 (635)
.++..|+|||.+.+.. .+.++||||||+++|||++|..|+....... ...+. ....... ...
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~-------------~~~~~~~--~~~ 230 (288)
T cd05583 167 CGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-SQSEI-------------SRRILKS--KPP 230 (288)
T ss_pred cCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-hHHHH-------------HHHHHcc--CCC
Confidence 6788999999987654 7889999999999999999999975322110 00000 0111110 012
Q ss_pred CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcccccc
Q 042486 583 YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 583 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w~~ 628 (635)
.+...+..+.+++.+||+.||++|||+.++.+.|+...-...+|+.
T Consensus 231 ~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~ 276 (288)
T cd05583 231 FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDD 276 (288)
T ss_pred CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHH
Confidence 2333445689999999999999999999998888888778888864
No 341
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=7.1e-31 Score=268.81 Aligned_cols=243 Identities=30% Similarity=0.404 Sum_probs=182.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+++. +++.+++|++... +.+|++++++++|+||+++++++..++..++|+||+++ +|.+++...
T Consensus 13 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~ 91 (283)
T cd05118 13 GVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDR 91 (283)
T ss_pred ceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhh
Confidence 79999987 6889999987542 45789999999999999999999999999999999975 888888654
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
. ..+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+........ ......++..|
T Consensus 92 ~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~~ 164 (283)
T cd05118 92 Q-RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR---PYTHYVVTRWY 164 (283)
T ss_pred c-ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc---cccCccCcccc
Confidence 3 34899999999999999999999855 99999999999999999999999999876544321 11224577889
Q ss_pred cCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcC---------Cc--
Q 042486 511 MAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMD---------PS-- 578 (635)
Q Consensus 511 ~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d---------~~-- 578 (635)
+|||.+.+. ..+.++|+||||+++|+|++|+.||...+..+. +...... +.... .+....+.+ +.
T Consensus 165 ~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T cd05118 165 RAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ-LFKIFRT-LGTPD-PEVWPKFTSLARNYKFSFPKKA 241 (283)
T ss_pred cCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHH-cCCCc-hHhcccchhhhhhhhhhhcccc
Confidence 999998776 789999999999999999999988754433221 1111110 00000 000000000 00
Q ss_pred --CCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 579 --MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 579 --~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.........+..+.+++.+||+.||.+||++.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 242 GMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred ccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0001122345678999999999999999999999864
No 342
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=1.1e-30 Score=270.00 Aligned_cols=230 Identities=20% Similarity=0.330 Sum_probs=174.2
Q ss_pred ceEEEeeeC--CcEEEEEEeccC--------hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKIG--GDFVAIKKVYGD--------ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~~--~~~vavK~~~~~--------~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+++.. ++.||||.++.. +..|+.++.+. .|+||+++++++.++...|++|||+. ++|.+++...
T Consensus 29 ~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~ 107 (296)
T cd06618 29 GQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRI 107 (296)
T ss_pred eEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHh
Confidence 899999984 899999998642 23466666666 49999999999999999999999985 4777766443
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
. ..+++..+..++.|++.||.|||+. .+++||||+|+||++++++.+||+|||++........ .....++..|
T Consensus 108 ~-~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~----~~~~~~~~~y 180 (296)
T cd06618 108 Q-GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA----KTRSAGCAAY 180 (296)
T ss_pred c-CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc----ccCCCCCccc
Confidence 2 2589999999999999999999972 3599999999999999999999999999875433211 1223577899
Q ss_pred cCccccccCC----CCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 511 MAPEYLENGL----VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 511 ~aPE~~~~~~----~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
+|||.+.... ++.++||||||+++|||++|+.||.....+...+....... .+.. .....
T Consensus 181 ~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--------------~~~~--~~~~~ 244 (296)
T cd06618 181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE--------------PPSL--PPNEG 244 (296)
T ss_pred cCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC--------------CCCC--CCCCC
Confidence 9999987543 78899999999999999999999854322211111111100 0000 00112
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+..+.+++.+||+.||++||++++++++
T Consensus 245 ~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 245 FSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 34558999999999999999999999877
No 343
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=1.4e-30 Score=268.82 Aligned_cols=228 Identities=21% Similarity=0.375 Sum_probs=181.1
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.||++.. ++..||||++.. .+.+|+.++++++|+||+++++.+..++..++||||+++++|.+++...
T Consensus 34 g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-- 111 (292)
T cd06657 34 GIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-- 111 (292)
T ss_pred eEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC--
Confidence 89999987 688999998743 2557899999999999999999999999999999999999999987543
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
.+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++........ ......++..|+|
T Consensus 112 -~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~~ 184 (292)
T cd06657 112 -RMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP---RRKSLVGTPYWMA 184 (292)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceecccccc---cccccccCccccC
Confidence 3799999999999999999999854 99999999999999999999999998875433211 1123467889999
Q ss_pred ccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHH
Q 042486 513 PEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVI 592 (635)
Q Consensus 513 PE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~ 592 (635)
||.+.+..++.++|+||||+++|+|++|..|+........ .... .....+.+. .....+..+.
T Consensus 185 pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~--~~~~-------------~~~~~~~~~--~~~~~~~~l~ 247 (292)
T cd06657 185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMI-------------RDNLPPKLK--NLHKVSPSLK 247 (292)
T ss_pred HHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH-------------HhhCCcccC--CcccCCHHHH
Confidence 9999888889999999999999999999999754322110 0000 000111110 0112334578
Q ss_pred HHHHHhhhcCCCCCCCHHHHHHH
Q 042486 593 RLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 593 ~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+++.+||+.||.+||++.+++++
T Consensus 248 ~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 248 GFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHHHHHHhCCcccCcCHHHHhcC
Confidence 99999999999999999999985
No 344
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=2.1e-30 Score=260.71 Aligned_cols=227 Identities=28% Similarity=0.450 Sum_probs=183.4
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+++. +++.+++|.+... +.+|++++++++|+|++++++++.+++..+++|||+++++|.+++...
T Consensus 14 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~ 93 (254)
T cd06627 14 GVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF 93 (254)
T ss_pred eEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc
Confidence 89999987 6789999988543 467899999999999999999999999999999999999999999654
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||.+......... .....++..|
T Consensus 94 --~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y 165 (254)
T cd06627 94 --GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD---DASVVGTPYW 165 (254)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCccc---ccccccchhh
Confidence 34899999999999999999999854 999999999999999999999999999866543321 2234678899
Q ss_pred cCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHH
Q 042486 511 MAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAIL 590 (635)
Q Consensus 511 ~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~ 590 (635)
+|||...+...+.++||||||+++++|++|+.|+....... ....... ......+...+..
T Consensus 166 ~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~-~~~~~~~------------------~~~~~~~~~~~~~ 226 (254)
T cd06627 166 MAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA-ALFRIVQ------------------DDHPPLPEGISPE 226 (254)
T ss_pred cCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHhc------------------cCCCCCCCCCCHH
Confidence 99999988778999999999999999999999875332111 1111100 0001122233456
Q ss_pred HHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 591 VIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 591 l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+.+++.+||..+|++||++.+++.+
T Consensus 227 ~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 227 LKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHHHHHHHHhCChhhCcCHHHHhcC
Confidence 8999999999999999999999853
No 345
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=1.4e-30 Score=274.38 Aligned_cols=247 Identities=26% Similarity=0.397 Sum_probs=179.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhh-ccCCcccEEEEEecC--CeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKI-NHSSLIRLLGICFNG--GNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l-~h~nIv~l~~~~~~~--~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+|.. ++..+|+|++... +.+|+.+++++ +|+||+++++++... ...++||||++ ++|.+++
T Consensus 21 ~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~ 99 (337)
T cd07852 21 GIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVI 99 (337)
T ss_pred eeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHH
Confidence 89999987 6789999988432 44699999999 999999999998643 36799999997 5998888
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc--eeeecccc
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE--FALTSHIV 505 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~ 505 (635)
... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......... ........
T Consensus 100 ~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~ 173 (337)
T cd07852 100 RAN---ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYV 173 (337)
T ss_pred hcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhccc
Confidence 654 489999999999999999999985 4999999999999999999999999999865432211 01223356
Q ss_pred cCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhH--HHHhhhcccc-------cCCchhhhhhhc
Q 042486 506 GTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENML--LVDVLNPVLH-------KEDGEESLRHLM 575 (635)
Q Consensus 506 gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~--l~~~~~~~~~-------~~~~~~~l~~~~ 575 (635)
++..|+|||.+.+ ..++.++||||||+++|+|++|+.||......... .......... .......+....
T Consensus 174 ~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (337)
T cd07852 174 ATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLP 253 (337)
T ss_pred ccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcc
Confidence 8899999998754 55788999999999999999999988643322110 0000000000 000000000000
Q ss_pred CCcCC--CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 576 DPSMQ--GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 576 d~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..... .......+..+.+++.+||+.||++|||+.+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 254 SRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred cccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000 00011135668999999999999999999999987
No 346
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=279.41 Aligned_cols=230 Identities=23% Similarity=0.369 Sum_probs=182.6
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.|||++. .+-..|-|.+.- ++.-||+||..+.||+||+|++.|..++.++|+.|||.||-.+..+-.-+
T Consensus 46 GKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~- 124 (1187)
T KOG0579|consen 46 GKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELG- 124 (1187)
T ss_pred hhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhc-
Confidence 89999987 444566777642 45568999999999999999999999999999999999999988885543
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
..|.+.++..+++++++||.|||+ ++|||||||..|||++-+|.++|+|||.+...... ......+.||+.|||
T Consensus 125 r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t---~qkRDsFIGTPYWMA 198 (1187)
T KOG0579|consen 125 RVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST---RQKRDSFIGTPYWMA 198 (1187)
T ss_pred cccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhH---HhhhccccCCccccc
Confidence 349999999999999999999998 55999999999999999999999999997643322 123345789999999
Q ss_pred ccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 513 PEYLE-----NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 513 PE~~~-----~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
||+.. ...|+.++||||||++|.||..+.+|...-+. ..++...-. --.|. -..|...
T Consensus 199 PEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-----MRVllKiaK----------SePPT--LlqPS~W 261 (1187)
T KOG0579|consen 199 PEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAK----------SEPPT--LLQPSHW 261 (1187)
T ss_pred chheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-----HHHHHHHhh----------cCCCc--ccCcchh
Confidence 99874 56789999999999999999999987532111 111111100 00111 1235667
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+.+++++||..||..||++.++++|
T Consensus 262 s~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 262 SRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred hhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 7789999999999999999999999875
No 347
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=1.3e-30 Score=269.77 Aligned_cols=243 Identities=26% Similarity=0.363 Sum_probs=176.5
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCC----------eeEEEeecccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGG----------NWYLVYENAVN 420 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~----------~~~lV~E~~~~ 420 (635)
|.||+|.. +++.||+|.++. .+.+|++++++++||||+++++++.+.. ..++|+||+++
T Consensus 21 g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~ 100 (302)
T cd07864 21 GQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH 100 (302)
T ss_pred EEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc
Confidence 89999998 678999998853 2357999999999999999999987654 78999999976
Q ss_pred CCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceee
Q 042486 421 GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500 (635)
Q Consensus 421 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 500 (635)
+|...+.... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||++......... .
T Consensus 101 -~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~--~ 173 (302)
T cd07864 101 -DLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR--P 173 (302)
T ss_pred -cHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCcccccccccCCccc--c
Confidence 6767665432 3489999999999999999999985 4999999999999999999999999998765433211 1
Q ss_pred ecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhh-----
Q 042486 501 TSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL----- 574 (635)
Q Consensus 501 ~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~----- 574 (635)
.....++..|+|||.+.+ ..++.++|||||||+++||++|+.|+...+... .+... ........ ......+
T Consensus 174 ~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~-~~~~~-~~~~~~~~-~~~~~~~~~~~~ 250 (302)
T cd07864 174 YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA-QLELI-SRLCGSPC-PAVWPDVIKLPY 250 (302)
T ss_pred cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH-HHHhCCCC-hhhccccccccc
Confidence 122345778999998764 457889999999999999999998886433211 11111 11100000 0000000
Q ss_pred ---cC------CcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 575 ---MD------PSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 575 ---~d------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+ ...... ....+..+.+++.+||+.||.+||++++++++
T Consensus 251 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 251 FNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred ccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 000000 11124568999999999999999999999864
No 348
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=5.4e-31 Score=269.12 Aligned_cols=229 Identities=28% Similarity=0.397 Sum_probs=184.1
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcchhhc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~ 428 (635)
|.||+++. ++..||+|.+.. .+.+|.+++++++ |+||+++++++.+++..++||||+++++|.+++.
T Consensus 15 ~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 94 (280)
T cd05581 15 STVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIR 94 (280)
T ss_pred eEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHH
Confidence 89999988 788999998854 2456889999998 9999999999999999999999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc-----------
Q 042486 429 DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE----------- 497 (635)
Q Consensus 429 ~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~----------- 497 (635)
... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.........
T Consensus 95 ~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~ 169 (280)
T cd05581 95 KYG--SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNID 169 (280)
T ss_pred HcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCcccc
Confidence 653 4999999999999999999999855 999999999999999999999999998765432210
Q ss_pred ------eeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhh
Q 042486 498 ------FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESL 571 (635)
Q Consensus 498 ------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l 571 (635)
........++..|+|||.+....++.++|+||||++++++++|+.|+....... .+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------------------~~ 231 (280)
T cd05581 170 SQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL------------------TF 231 (280)
T ss_pred ccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH------------------HH
Confidence 012233467889999999988889999999999999999999999976433111 01
Q ss_pred hhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCH----HHHHHH
Q 042486 572 RHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAM----DKIAQS 615 (635)
Q Consensus 572 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~~ 615 (635)
..... .....+...+..+.+++.+||+.||.+||++ ++++++
T Consensus 232 ~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 232 QKILK--LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHh--cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 11111 1112233345568999999999999999999 777654
No 349
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=8e-31 Score=260.30 Aligned_cols=237 Identities=24% Similarity=0.361 Sum_probs=185.8
Q ss_pred ceEEEeee-------CCcEEEEEEeccCh--------HHHHHHHhhhccCCcccEEEEEecC-CeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI-------GGDFVAIKKVYGDA--------SDQIKLLNKINHSSLIRLLGICFNG-GNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~-------~~~~vavK~~~~~~--------~~E~~~l~~l~h~nIv~l~~~~~~~-~~~~lV~E~~~~gsL~~ 425 (635)
|.||+|.| +.+.|-+|.++... ..|--+|..+.|||+..+.+++.++ ...+.+|.++.-|+|..
T Consensus 298 Gri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~ 377 (563)
T KOG1024|consen 298 GRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKS 377 (563)
T ss_pred hheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHH
Confidence 89999966 23457777776643 3466667777899999999999865 45689999999999999
Q ss_pred hhcc------cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCcee
Q 042486 426 WIND------KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFA 499 (635)
Q Consensus 426 ~l~~------~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 499 (635)
+|.. ...+.++..+...++.|++.|++|||+++ +||.||..+|++||+..++||+|=.+++..-+.+. .+
T Consensus 378 FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DY-hc 453 (563)
T KOG1024|consen 378 FLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDY-HC 453 (563)
T ss_pred HHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhheeEEeccchhccccCcccc-cc
Confidence 9962 22345788889999999999999999966 99999999999999999999999999986544332 12
Q ss_pred eecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCc
Q 042486 500 LTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPS 578 (635)
Q Consensus 500 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~ 578 (635)
..........||+||.+.+..++..+|||||||+||||+| |+.|+..-+.. ....++...
T Consensus 454 LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf-------------------Em~~ylkdG 514 (563)
T KOG1024|consen 454 LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF-------------------EMEHYLKDG 514 (563)
T ss_pred cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH-------------------HHHHHHhcc
Confidence 2223345568999999999999999999999999999998 66665422221 122222233
Q ss_pred CCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042486 579 MQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621 (635)
Q Consensus 579 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 621 (635)
.+-..|..++++|..++.-||..+|++||++++++.-|+++..
T Consensus 515 yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 515 YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 3344566778889999999999999999999999999998754
No 350
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.1e-30 Score=274.14 Aligned_cols=250 Identities=28% Similarity=0.343 Sum_probs=185.6
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCC-----eeEEEeecccCCCcch
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGG-----NWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~lV~E~~~~gsL~~ 425 (635)
|.||+++. ++..+|||++.. .+.+|+.++++++|+||+++++++...+ ..|++|||++ ++|.+
T Consensus 14 ~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~ 92 (330)
T cd07834 14 GVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHK 92 (330)
T ss_pred eEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHH
Confidence 89999997 578999998754 3557999999999999999999998765 7899999997 48988
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++.... .+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||++.................
T Consensus 93 ~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~ 167 (330)
T cd07834 93 VIKSPQ--PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYV 167 (330)
T ss_pred HHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccc
Confidence 886543 4999999999999999999999855 99999999999999999999999999986554321111123346
Q ss_pred cCCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC-----------chhhhhh
Q 042486 506 GTKGYMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED-----------GEESLRH 573 (635)
Q Consensus 506 gt~~y~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~-----------~~~~l~~ 573 (635)
++..|+|||.+.+. .++.++|+||||+++|+|++|+.||........ .... ........ ....+..
T Consensus 168 ~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (330)
T cd07834 168 VTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNLI-VEVLGTPSEEDLKFITSEKARNYLKS 245 (330)
T ss_pred cccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHH-HHhcCCCChhHhhhccccchhhHHhh
Confidence 78899999999877 789999999999999999999999865433221 1111 11110000 0000010
Q ss_pred hcCCcCC---CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH--HHHHH
Q 042486 574 LMDPSMQ---GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS--ISRFL 620 (635)
Q Consensus 574 ~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 620 (635)
. ..... .......+..+.+++.+||+.||.+||++++++.+ ++.+.
T Consensus 246 ~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 246 L-PKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred c-ccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 0 00000 00112235568999999999999999999999987 44443
No 351
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=8.8e-31 Score=275.56 Aligned_cols=246 Identities=24% Similarity=0.331 Sum_probs=179.5
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEec----CCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFN----GGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+++. ++..||+|++... +.+|+.+|++++|+||+++++++.. ....++||||+. ++|.++
T Consensus 19 g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~ 97 (334)
T cd07855 19 GVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHI 97 (334)
T ss_pred eEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHH
Confidence 78999987 6889999988642 3468999999999999999998763 346799999995 689998
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc-eeeecccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE-FALTSHIV 505 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~ 505 (635)
+.... .+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++......... ........
T Consensus 98 ~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 172 (334)
T cd07855 98 IHSDQ--PLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYV 172 (334)
T ss_pred hccCC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCccccccc
Confidence 86543 3899999999999999999999854 999999999999999999999999998755432211 11122346
Q ss_pred cCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccC-------CchhhhhhhcCC
Q 042486 506 GTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE-------DGEESLRHLMDP 577 (635)
Q Consensus 506 gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~-------~~~~~l~~~~d~ 577 (635)
++..|+|||.+.+ ..++.++||||||+++|||++|+.||...+.... + ..+....... .....+.+..+.
T Consensus 173 ~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~-~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 250 (334)
T cd07855 173 ATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ-L-KLILSVLGSPSEEVLNRIGSDRVRKYIQN 250 (334)
T ss_pred ccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH-H-HHHHHHhCCChhHhhhhhchhhHHHHHhh
Confidence 8889999998765 5688999999999999999999999864332211 0 0000000000 000111111110
Q ss_pred -cCCCCC-----ChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 578 -SMQGNY-----PPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 578 -~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...... ....+..+.+++.+||+.||.+||++++++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 251 LPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred cccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000011 12235668999999999999999999999886
No 352
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.8e-30 Score=272.45 Aligned_cols=256 Identities=26% Similarity=0.341 Sum_probs=184.6
Q ss_pred HHHhhcCCCCCCccc----ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEec-CCe
Q 042486 347 LQAATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFN-GGN 410 (635)
Q Consensus 347 l~~at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~ 410 (635)
+...+++|.....|| |.||++.. +++.||+|++.. .+.+|++++++++||||+++.+++.. .+.
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 344556666555554 89999986 688999998742 35579999999999999999999875 557
Q ss_pred eEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccc
Q 042486 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490 (635)
Q Consensus 411 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 490 (635)
.++++||+ +++|.+++... .+++.....++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||.+..
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccc
Confidence 89999998 56898887543 3788888899999999999999854 99999999999999999999999999875
Q ss_pred ccccCCceeeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchh--hHHHHhhhccc----c
Q 042486 491 AERQEGEFALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN--MLLVDVLNPVL----H 563 (635)
Q Consensus 491 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~--~~l~~~~~~~~----~ 563 (635)
..... ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||....... ..+.+...... .
T Consensus 158 ~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 158 QDPQM------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVIN 231 (328)
T ss_pred cCCCc------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 43211 12356788999998765 568999999999999999999998886433211 01111111000 0
Q ss_pred cCCchhhhhhhcCCcCCCCCC-----hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 564 KEDGEESLRHLMDPSMQGNYP-----PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 564 ~~~~~~~l~~~~d~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.........-+..-......+ ...+..+.+++.+||+.+|++||++++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000000011111 1234568999999999999999999999887
No 353
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=6.1e-31 Score=276.54 Aligned_cols=225 Identities=22% Similarity=0.361 Sum_probs=184.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
+.|..++. ++..||||.+.+. +.+|+++|+.++|||||+++.+......+|+||||+.+|.+.+++...
T Consensus 70 ~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~ 149 (596)
T KOG0586|consen 70 AKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKH 149 (596)
T ss_pred EEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhc
Confidence 67888876 7899999988653 458999999999999999999999999999999999999999999766
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
+. +.+.....++.|+..|++|||+.. |+|||||.+||||+.+..+||+|||++...... ......+|++.|
T Consensus 150 gr--~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~----~~lqt~cgsppy 220 (596)
T KOG0586|consen 150 GR--MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDYG----LMLQTFCGSPPY 220 (596)
T ss_pred cc--chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeeccc----ccccccCCCCCc
Confidence 54 666888889999999999999854 999999999999999999999999999877643 234557899999
Q ss_pred cCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 511 MAPEYLENGLV-STKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 511 ~aPE~~~~~~~-s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
.|||++.+..+ .+++|+||+|+++|-|+.|..||+...-. +.-++.+-..+ ..+.....
T Consensus 221 AaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk------------------~Lr~rvl~gk~--rIp~~ms~ 280 (596)
T KOG0586|consen 221 AAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK------------------ELRPRVLRGKY--RIPFYMSC 280 (596)
T ss_pred cChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc------------------cccchheeeee--cccceeec
Confidence 99999987654 78999999999999999999998632111 00011111111 12233344
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...++|+++|-.+|.+|++++++.++
T Consensus 281 dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 281 DCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred hhHHHHHHhhccCccccCCHHHhhhh
Confidence 57899999999999999999999876
No 354
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=3.1e-30 Score=265.61 Aligned_cols=231 Identities=24% Similarity=0.359 Sum_probs=178.2
Q ss_pred ceEEEeee-----CCcEEEEEEecc-----------ChHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcc
Q 042486 362 GSVYRGKI-----GGDFVAIKKVYG-----------DASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~-----~~~~vavK~~~~-----------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~ 424 (635)
|.||+++. +|..||+|.++. .+.+|+++++++ +|+||+++++.+..++..++||||+++++|.
T Consensus 14 g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (290)
T cd05613 14 GKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELF 93 (290)
T ss_pred ceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHH
Confidence 78999875 678999998853 244689999999 5999999999999888999999999999999
Q ss_pred hhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeeccc
Q 042486 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHI 504 (635)
Q Consensus 425 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 504 (635)
+++.... .+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++........ ......
T Consensus 94 ~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~ 166 (290)
T cd05613 94 THLSQRE--RFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV--ERAYSF 166 (290)
T ss_pred HHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceecccccc--cccccc
Confidence 9996543 3889999999999999999999854 99999999999999999999999999876533221 112235
Q ss_pred ccCCCccCcccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCC
Q 042486 505 VGTKGYMAPEYLEN--GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGN 582 (635)
Q Consensus 505 ~gt~~y~aPE~~~~--~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~ 582 (635)
.++..|+|||.+.. ..++.++||||||+++|+|++|+.|+....... ... +....+... ...
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-~~~-------------~~~~~~~~~--~~~ 230 (290)
T cd05613 167 CGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN-SQA-------------EISRRILKS--EPP 230 (290)
T ss_pred cCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc-cHH-------------HHHHHhhcc--CCC
Confidence 68889999999875 346789999999999999999999875321110 000 111111111 012
Q ss_pred CChHHHHHHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042486 583 YPPVTAILVIRLIESCLKKDPSGRP-----AMDKIAQS 615 (635)
Q Consensus 583 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 615 (635)
++......+.+++.+||+.||++|| ++++++.+
T Consensus 231 ~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 231 YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 2333455689999999999999997 67777665
No 355
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=267.32 Aligned_cols=242 Identities=26% Similarity=0.317 Sum_probs=194.7
Q ss_pred HHHHhh-cCCCCCCccc----ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecC
Q 042486 346 ELQAAT-DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNG 408 (635)
Q Consensus 346 el~~at-~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~ 408 (635)
|.+..| +.|..-+.+| |.||-.+. +|+.+|.|++.+. ..+|-.+|.+++.+.||.+-..|+..
T Consensus 178 E~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk 257 (591)
T KOG0986|consen 178 ELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK 257 (591)
T ss_pred HhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC
Confidence 334344 3465555554 78997765 8999999877431 45799999999999999999999999
Q ss_pred CeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCc
Q 042486 409 GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488 (635)
Q Consensus 409 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 488 (635)
+.+|+|+..|.||+|.-+|...+...+++.....++.+|+.||++||+.. ||.||+||+|||+|+.|+++|+|+|+|
T Consensus 258 d~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLA 334 (591)
T KOG0986|consen 258 DALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLA 334 (591)
T ss_pred CceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceE
Confidence 99999999999999999997777667999999999999999999999855 999999999999999999999999999
Q ss_pred ccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCch
Q 042486 489 RPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE 568 (635)
Q Consensus 489 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 568 (635)
..+..... ....+||.+|||||++.++.|+...|.|||||++|||+.|+.||....+.. ..
T Consensus 335 vei~~g~~----~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv---------------k~ 395 (591)
T KOG0986|consen 335 VEIPEGKP----IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV---------------KR 395 (591)
T ss_pred EecCCCCc----cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh---------------hH
Confidence 87765432 233589999999999999999999999999999999999999985432211 11
Q ss_pred hhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHH
Q 042486 569 ESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMD 610 (635)
Q Consensus 569 ~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 610 (635)
+.+.+..- .....++...+.+..+|.+..|..||++|.-..
T Consensus 396 eEvdrr~~-~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 396 EEVDRRTL-EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred HHHHHHHh-cchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 12221111 112356666777889999999999999996543
No 356
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=1.3e-30 Score=274.58 Aligned_cols=251 Identities=28% Similarity=0.389 Sum_probs=182.6
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecC-----CeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNG-----GNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~lV~E~~~~gsL~~ 425 (635)
|.||+++. ++..||||++... +.+|+.++++++|+||+++++++... ...|+|+||+. ++|.+
T Consensus 19 ~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~ 97 (337)
T cd07858 19 GIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQ 97 (337)
T ss_pred eEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHH
Confidence 89999987 6889999987542 34689999999999999999988644 34799999995 68988
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
++.... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... .......
T Consensus 98 ~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~ 169 (337)
T cd07858 98 IIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG---DFMTEYV 169 (337)
T ss_pred HHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccccCCCc---ccccccc
Confidence 886543 3899999999999999999999854 9999999999999999999999999998654322 1122345
Q ss_pred cCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhh--HHHHhhhcc-------cccCCchhhhhhh-
Q 042486 506 GTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENM--LLVDVLNPV-------LHKEDGEESLRHL- 574 (635)
Q Consensus 506 gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~--~l~~~~~~~-------~~~~~~~~~l~~~- 574 (635)
++..|+|||.+.. ..++.++||||||+++|+|++|+.||...+.... ......... .......+.....
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (337)
T cd07858 170 VTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLP 249 (337)
T ss_pred cccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcC
Confidence 7889999998764 4688999999999999999999998864322110 011111000 0000000111000
Q ss_pred --cCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH--HHHHHhh
Q 042486 575 --MDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS--ISRFLNA 622 (635)
Q Consensus 575 --~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~~~ 622 (635)
.++... ......+..+.+++.+||+.||++||+++|++++ ++.+...
T Consensus 250 ~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 250 YTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred cccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 000000 0112245568999999999999999999999998 6655443
No 357
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=2.8e-30 Score=259.42 Aligned_cols=222 Identities=27% Similarity=0.395 Sum_probs=180.0
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+++. +++.+|+|.+.. .+.+|++++++++|+||+++++.+..++..+++|||+++++|.+++..
T Consensus 7 ~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~ 86 (250)
T cd05123 7 GKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSK 86 (250)
T ss_pred eEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHh
Confidence 79999988 578999998754 355789999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....... .......++..
T Consensus 87 ~~--~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~ 158 (250)
T cd05123 87 EG--RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---SRTNTFCGTPE 158 (250)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC---CcccCCcCCcc
Confidence 43 389999999999999999999984 49999999999999999999999999987654321 11233567889
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|++||...+...+.++|+||||+++|+|++|+.|+...+... . ...+... ....+...+.
T Consensus 159 ~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--~----------------~~~~~~~--~~~~~~~~~~ 218 (250)
T cd05123 159 YLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE--I----------------YEKILKD--PLRFPEFLSP 218 (250)
T ss_pred ccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--H----------------HHHHhcC--CCCCCCCCCH
Confidence 999999988888999999999999999999999985433211 1 1111111 1122333356
Q ss_pred HHHHHHHHhhhcCCCCCCCHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDK 611 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~e 611 (635)
.+.+++.+||..||++||++.+
T Consensus 219 ~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 219 EARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHHhcCCHhhCCCccc
Confidence 6899999999999999999943
No 358
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=3.4e-30 Score=267.69 Aligned_cols=249 Identities=27% Similarity=0.362 Sum_probs=175.2
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCC--------eeEEEeecccCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGG--------NWYLVYENAVNGS 422 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~--------~~~lV~E~~~~gs 422 (635)
|.||+++. +++.+|||++.. .+.+|++++++++|+||+++++++.... ..++|+||+.+ +
T Consensus 22 ~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~ 100 (311)
T cd07866 22 GEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-D 100 (311)
T ss_pred EEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCc-C
Confidence 89999987 678999998742 2467999999999999999999876433 46999999865 6
Q ss_pred cchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCce----
Q 042486 423 LSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEF---- 498 (635)
Q Consensus 423 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~---- 498 (635)
|...+.... ..+++..+..++.|+++||.|||+.+ ++|+||||+||++++++.++|+|||+++.........
T Consensus 101 l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 176 (311)
T cd07866 101 LSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGG 176 (311)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCC
Confidence 777665432 34899999999999999999999855 9999999999999999999999999997554322110
Q ss_pred ----eeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhh--HHHHhhhcccccC-Cchhh
Q 042486 499 ----ALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENM--LLVDVLNPVLHKE-DGEES 570 (635)
Q Consensus 499 ----~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~--~l~~~~~~~~~~~-~~~~~ 570 (635)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ ............. .....
T Consensus 177 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T cd07866 177 GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRS 256 (311)
T ss_pred cccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhh
Confidence 01122356788999998765 4578999999999999999999988864333211 1111100000000 00000
Q ss_pred hhhhcCCcCCCCCC-------hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 571 LRHLMDPSMQGNYP-------PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 571 l~~~~d~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+....+.......+ ......+.+++.+||+.||++|||+.|++.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 257 LPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred cccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 11100000000011 1122458899999999999999999999864
No 359
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=4.6e-30 Score=270.13 Aligned_cols=245 Identities=26% Similarity=0.321 Sum_probs=179.6
Q ss_pred ceEEEeee--CCcEEEEEEecc---------------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENA 418 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 418 (635)
|.||+++. +++.||||.++. .+.+|++++++++|+||+++++++..++..++||||+
T Consensus 23 g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 102 (335)
T PTZ00024 23 GKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIM 102 (335)
T ss_pred eeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEecc
Confidence 89999986 688999998753 2457999999999999999999999999999999999
Q ss_pred cCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCC--
Q 042486 419 VNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG-- 496 (635)
Q Consensus 419 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~-- 496 (635)
. |+|.+++.... .+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 103 ~-~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~ 176 (335)
T PTZ00024 103 A-SDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSD 176 (335)
T ss_pred c-cCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEECCccceeecccccccc
Confidence 6 68999886533 3899999999999999999999855 99999999999999999999999999876541100
Q ss_pred ---------ceeeecccccCCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC
Q 042486 497 ---------EFALTSHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED 566 (635)
Q Consensus 497 ---------~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 566 (635)
.........++..|+|||.+.+. .++.++||||||+++|||++|+.||...+..+. +..... ......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~~i~~-~~~~~~ 254 (335)
T PTZ00024 177 TLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ-LGRIFE-LLGTPN 254 (335)
T ss_pred cccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH-HhCCCc
Confidence 00111223467889999998764 468999999999999999999998865443221 111111 010000
Q ss_pred ch-----hhhh------hhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 567 GE-----ESLR------HLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 567 ~~-----~~l~------~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.. ..+. ....+... ......+..+.+++.+||+.||++||+++|++.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 255 EDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred hhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 00 0000 00000000 0011224558899999999999999999999975
No 360
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=6.3e-31 Score=279.87 Aligned_cols=253 Identities=25% Similarity=0.377 Sum_probs=190.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCC------eeEEEeecccCCCcch
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGG------NWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~------~~~lV~E~~~~gsL~~ 425 (635)
|.||+|+. +|+.||||.++.. ..+|+++|++++|+|||+++++-.... ...+|||||.+|||..
T Consensus 27 g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~ 106 (732)
T KOG4250|consen 27 GNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRK 106 (732)
T ss_pred ceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHH
Confidence 89999985 8999999988652 347999999999999999999866443 4689999999999999
Q ss_pred hhcccC-CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEE--CC--CCcEEEeeecCcccccccCCceee
Q 042486 426 WINDKG-GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL--DT--DFRAKIANFALARPAERQEGEFAL 500 (635)
Q Consensus 426 ~l~~~~-~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll--~~--~~~~kl~Dfg~a~~~~~~~~~~~~ 500 (635)
.|.+.. ...|++.+.+.++.+++.||.|||++ +|+||||||.||++ .+ .-..||+|||.|+..+... .
T Consensus 107 ~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s----~ 179 (732)
T KOG4250|consen 107 VLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS----L 179 (732)
T ss_pred HhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC----e
Confidence 996543 34599999999999999999999984 49999999999998 23 3357999999999776554 3
Q ss_pred ecccccCCCccCccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchh----hHHHHhhhcc---c----ccCCch
Q 042486 501 TSHIVGTKGYMAPEYLE-NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN----MLLVDVLNPV---L----HKEDGE 568 (635)
Q Consensus 501 ~~~~~gt~~y~aPE~~~-~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~----~~l~~~~~~~---~----~~~~~~ 568 (635)
....+||..|++||... .+.++...|.|||||++||+.||..||....... ..+.....+. . ..++..
T Consensus 180 ~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgp 259 (732)
T KOG4250|consen 180 FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGP 259 (732)
T ss_pred eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCc
Confidence 45689999999999998 5889999999999999999999999987644432 1111111100 0 000000
Q ss_pred hhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCC--CHHHHHHHHHHHHhhc
Q 042486 569 ESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRP--AMDKIAQSISRFLNAS 623 (635)
Q Consensus 569 ~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~~~~~s 623 (635)
-.....+ |. ...........+...+..+|..+|++|. ...+....+..++...
T Consensus 260 v~~s~~l-P~-p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~ 314 (732)
T KOG4250|consen 260 VEWSSTL-PQ-PNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLK 314 (732)
T ss_pred eeeeccC-CC-cccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhh
Confidence 0000000 00 1111233445567788899999999999 8888888888887655
No 361
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.1e-30 Score=286.58 Aligned_cols=227 Identities=21% Similarity=0.296 Sum_probs=160.8
Q ss_pred hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC---CCCCCHHHHHHHHHHHHhhhcccccCCC
Q 042486 383 ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG---GKFLDWAQRIQIALDVATGLNYLHSFTN 459 (635)
Q Consensus 383 ~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~aL~~LH~~~~ 459 (635)
+.+|+++|++++|+||+++++++...+..|+|+|++. ++|.+++.... ...........|+.||+.||.|||+.+
T Consensus 210 ~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g- 287 (501)
T PHA03210 210 LENEILALGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK- 287 (501)
T ss_pred HHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-
Confidence 5689999999999999999999999999999999985 57777764321 112345667789999999999999854
Q ss_pred CCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh
Q 042486 460 PPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS 539 (635)
Q Consensus 460 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt 539 (635)
|+||||||+|||++.++.+||+|||+++....... .......||..|+|||++.+..++.++|||||||++|||++
T Consensus 288 --IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 363 (501)
T PHA03210 288 --LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE--AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363 (501)
T ss_pred --eecCCCCHHHEEECCCCCEEEEeCCCceecCcccc--cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999986543221 12233579999999999999899999999999999999999
Q ss_pred CCCCCCCCc--chhhHHHHhhhccc--cc--CCchhhhhhhcCCc-C---CCCCCh-----HHHHHHHHHHHHhhhcCCC
Q 042486 540 GKEAPALYS--EENMLLVDVLNPVL--HK--EDGEESLRHLMDPS-M---QGNYPP-----VTAILVIRLIESCLKKDPS 604 (635)
Q Consensus 540 G~~p~~~~~--~~~~~l~~~~~~~~--~~--~~~~~~l~~~~d~~-~---~~~~~~-----~~~~~l~~li~~cl~~dP~ 604 (635)
|+.++.... .....+.+.+.... .. .+....+..+++.. . ....+. ..+..+.+++.+||+.||+
T Consensus 364 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~ 443 (501)
T PHA03210 364 HDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWH 443 (501)
T ss_pred CCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcc
Confidence 986543221 11122222221110 00 00001111111100 0 000000 1123467889999999999
Q ss_pred CCCCHHHHHHH
Q 042486 605 GRPAMDKIAQS 615 (635)
Q Consensus 605 ~RPs~~evl~~ 615 (635)
+|||+.|++.+
T Consensus 444 ~Rpsa~elL~h 454 (501)
T PHA03210 444 LRPGAAELLAL 454 (501)
T ss_pred cCcCHHHHhhC
Confidence 99999999875
No 362
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=2.3e-30 Score=273.55 Aligned_cols=265 Identities=23% Similarity=0.291 Sum_probs=190.4
Q ss_pred ccHHHHHHhhcCCCCCCccc----ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEe
Q 042486 342 YTFEELQAATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICF 406 (635)
Q Consensus 342 ~~~~el~~at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~ 406 (635)
...+++...+++|.....|| |.||++.. ++..||+|++... +.+|++++++++|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 34456677778887666665 79999986 6889999988642 346899999999999999999886
Q ss_pred cC------CeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcE
Q 042486 407 NG------GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRA 480 (635)
Q Consensus 407 ~~------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 480 (635)
.. ...+++++++ +++|.+++... .+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCE
Confidence 43 3467888876 78998888543 3899999999999999999999855 9999999999999999999
Q ss_pred EEeeecCcccccccCCceeeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhh
Q 042486 481 KIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559 (635)
Q Consensus 481 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~ 559 (635)
||+|||+++..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... .+.....
T Consensus 160 kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~ 232 (345)
T cd07877 160 KILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILR 232 (345)
T ss_pred EEeccccccccccc------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 99999998754322 122467889999998865 567889999999999999999999885432221 1111111
Q ss_pred ccc----------ccCCchhhhhhhcCCcCCC---CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 560 PVL----------HKEDGEESLRHLMDPSMQG---NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 560 ~~~----------~~~~~~~~l~~~~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
... .....+..+.. +...... ......+..+.+++.+||+.||.+||++.+++.+ .++..-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h--~~f~~~ 306 (345)
T cd07877 233 LVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH--AYFAQY 306 (345)
T ss_pred HhCCCCHHHHhhcccHhHHHHHHH-hcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC--hhhhhc
Confidence 000 00000000000 0000000 0001124458899999999999999999999987 445443
No 363
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=5.3e-30 Score=262.21 Aligned_cols=243 Identities=28% Similarity=0.392 Sum_probs=181.0
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||+|+. +++.+|+|.+... +.+|+.++++++|+|++++++++.+.+..++||||++ ++|.+++...
T Consensus 13 ~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~ 91 (282)
T cd07829 13 GVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKR 91 (282)
T ss_pred ceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhh
Confidence 89999998 5889999988642 3568999999999999999999999999999999997 5899999664
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
. ..+++..+..++.+++.||.|||+.+ ++||||+|+||++++++.++|+|||.+........ ......++..|
T Consensus 92 ~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~ 164 (282)
T cd07829 92 P-GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR---TYTHEVVTLWY 164 (282)
T ss_pred c-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc---ccCccccCcCc
Confidence 3 24899999999999999999999854 99999999999999999999999999876543221 11223456789
Q ss_pred cCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCch------------hhhhhhcCC
Q 042486 511 MAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE------------ESLRHLMDP 577 (635)
Q Consensus 511 ~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~------------~~l~~~~d~ 577 (635)
+|||.+.+. .++.++||||||++++||++|+.||....... .+.... ......... .........
T Consensus 165 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (282)
T cd07829 165 RAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID-QLFKIF-QILGTPTEESWPGVTKLPDYKPTFPKFPPK 242 (282)
T ss_pred CChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHH-HHhCCCcHHHHHhhcccccccccccccCcc
Confidence 999998766 78999999999999999999988875433221 111111 111000000 000000000
Q ss_pred cCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 578 SMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 578 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...... +.....+.+++.+||+.||++||++++++.+
T Consensus 243 ~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 243 DLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred chHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 000001 1124568999999999999999999999864
No 364
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=253.48 Aligned_cols=239 Identities=26% Similarity=0.359 Sum_probs=193.0
Q ss_pred ceEEEeee--CCcEEEEEEeccCh----------HHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGDA----------SDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~~----------~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.|-.++- +++.+|+|.+++++ ..|-++|+..+||.+..|...|...+.+|+||||+.||.|.-+|.+
T Consensus 182 GKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsr 261 (516)
T KOG0690|consen 182 GKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSR 261 (516)
T ss_pred ceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhh
Confidence 67766654 89999999998763 2466789999999999999999999999999999999999999966
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
.. .+++.....+..+|+.||.|||+ ++||.||||.+|.|+|.+|.+||+|||+++..-.. ...+..++||+.
T Consensus 262 er--~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~---g~t~kTFCGTPE 333 (516)
T KOG0690|consen 262 ER--VFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY---GDTTKTFCGTPE 333 (516)
T ss_pred hh--cccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcccc---cceeccccCChh
Confidence 43 37888778889999999999999 45999999999999999999999999999743322 234667899999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|+|||++....|....|.|.+||++|||++|+.||...+.+ .+.+. ++-..+ .+|...+.
T Consensus 334 YLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~--kLFeL----------------Il~ed~--kFPr~ls~ 393 (516)
T KOG0690|consen 334 YLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE--KLFEL----------------ILMEDL--KFPRTLSP 393 (516)
T ss_pred hcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh--HHHHH----------------HHhhhc--cCCccCCH
Confidence 99999999999999999999999999999999998643322 11111 111111 24445556
Q ss_pred HHHHHHHHhhhcCCCCCC--CHHHHHHHHHHHHhhcccccc
Q 042486 590 LVIRLIESCLKKDPSGRP--AMDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RP--s~~evl~~L~~~~~~s~~w~~ 628 (635)
+...|+...|..||++|. -.+++.+..+.-+-.+++|+.
T Consensus 394 eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~ 434 (516)
T KOG0690|consen 394 EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEA 434 (516)
T ss_pred HHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHH
Confidence 678899999999999995 356666666667778899975
No 365
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=1.5e-30 Score=274.60 Aligned_cols=246 Identities=23% Similarity=0.309 Sum_probs=174.4
Q ss_pred ceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhhccCCcccEEEEEecC--------------CeeEEEeecc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKINHSSLIRLLGICFNG--------------GNWYLVYENA 418 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l~h~nIv~l~~~~~~~--------------~~~~lV~E~~ 418 (635)
|.||+|.. ++..||+|++.. .+.+|++++++++|+||+++++++... ...++||||+
T Consensus 19 g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~ 98 (342)
T cd07854 19 GLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYM 98 (342)
T ss_pred EEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecc
Confidence 89999987 678999998743 256799999999999999999876543 3579999999
Q ss_pred cCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEEC-CCCcEEEeeecCcccccccCCc
Q 042486 419 VNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD-TDFRAKIANFALARPAERQEGE 497 (635)
Q Consensus 419 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~ 497 (635)
+ ++|.+++... .+++..+..++.|++.||.|||+.+ ++||||||+||+++ +++.+||+|||+++........
T Consensus 99 ~-~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~ 171 (342)
T cd07854 99 E-TDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH 171 (342)
T ss_pred c-ccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEECCcccceecCCcccc
Confidence 7 5888887542 3899999999999999999999855 99999999999997 4567899999998754322111
Q ss_pred eeeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccC--Cchhh---h
Q 042486 498 FALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKE--DGEES---L 571 (635)
Q Consensus 498 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~---l 571 (635)
........++..|+|||.+.. ..++.++|||||||++|||++|+.||........ ............ ..... +
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 250 (342)
T cd07854 172 KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLILESVPVVREEDRNELLNVI 250 (342)
T ss_pred ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCChHHhhhhhhhh
Confidence 111122357889999998654 5578899999999999999999999864432211 111111100000 00000 0
Q ss_pred hhhcC-CcCCCC-----CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 572 RHLMD-PSMQGN-----YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 572 ~~~~d-~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+. ...... .....+..+.+++.+||+.||++||+++|++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 251 PSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000 000000 011234568899999999999999999999975
No 366
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=3.4e-30 Score=260.79 Aligned_cols=228 Identities=23% Similarity=0.351 Sum_probs=176.2
Q ss_pred ceEEEeeeC--CcEEEEEEecc------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKIG--GDFVAIKKVYG------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~~--~~~vavK~~~~------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+++.. +..+++|.++. ++..|+.++++++||||+++++++.+....++||||+++++|.+++
T Consensus 14 g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 93 (260)
T cd08222 14 GTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKL 93 (260)
T ss_pred ceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHH
Confidence 899999873 34455555432 1346888999999999999999999888999999999999999988
Q ss_pred cc--cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 428 ND--KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 428 ~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
.. .....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++. +.++|+|||++....... .......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~---~~~~~~~ 166 (260)
T cd08222 94 EELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC---DLATTFT 166 (260)
T ss_pred HHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecCCCc---ccccCCC
Confidence 53 22345899999999999999999999854 999999999999975 569999999987653322 1122345
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP 585 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~ 585 (635)
++..|+|||.+.+..++.++|+||||+++|+|++|..|+....... . ....... .....+.
T Consensus 167 ~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~-----~-------------~~~~~~~-~~~~~~~ 227 (260)
T cd08222 167 GTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS-----V-------------VLRIVEG-PTPSLPE 227 (260)
T ss_pred CCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----H-------------HHHHHcC-CCCCCcc
Confidence 7889999999988888999999999999999999999875321110 0 0011110 0111233
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 586 VTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 586 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+..+.+++.+||..||++||++.|++++
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 228 TYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred hhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 455678999999999999999999999875
No 367
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=4.1e-30 Score=271.49 Aligned_cols=250 Identities=25% Similarity=0.384 Sum_probs=181.2
Q ss_pred hcCCCCCCccc----ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCC------
Q 042486 351 TDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGG------ 409 (635)
Q Consensus 351 t~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 409 (635)
.++|.....|| |.||++.. ++..||||++.. .+.+|+++|++++|+||+++++++..+.
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 34454444444 79999987 688999998853 2457999999999999999999987543
Q ss_pred eeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 410 NWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 410 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
..++||||+ +++|.+++... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.
T Consensus 94 ~~~lv~e~~-~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~~ 166 (343)
T cd07880 94 DFYLVMPFM-GTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 166 (343)
T ss_pred eEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeccccc
Confidence 458999998 77998888542 3899999999999999999999855 9999999999999999999999999987
Q ss_pred cccccCCceeeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcc-------
Q 042486 490 PAERQEGEFALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPV------- 561 (635)
Q Consensus 490 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~------- 561 (635)
...... ....++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||....... .........
T Consensus 167 ~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 239 (343)
T cd07880 167 QTDSEM------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIMKVTGTPSKEF 239 (343)
T ss_pred ccccCc------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHH
Confidence 553321 22457889999998875 457899999999999999999999986433211 111111100
Q ss_pred ---cccCCchhhhhhh---cCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 562 ---LHKEDGEESLRHL---MDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 562 ---~~~~~~~~~l~~~---~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+...........+ ....+ .......+..+.+++.+|++.||++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 240 VQKLQSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHhhcchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000 00000 00111234458899999999999999999999954
No 368
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=7.8e-30 Score=286.52 Aligned_cols=238 Identities=27% Similarity=0.437 Sum_probs=189.1
Q ss_pred ceEEEeeeC---------CcEEEEEEecc--------ChHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCc
Q 042486 362 GSVYRGKIG---------GDFVAIKKVYG--------DASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~~---------~~~vavK~~~~--------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 423 (635)
|.|++|... ...||||.++. ++..|+++|+.+ +|+||+.++|.|..++..++|+||+..|+|
T Consensus 310 G~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L 389 (609)
T KOG0200|consen 310 GQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDL 389 (609)
T ss_pred cceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcH
Confidence 899999752 34799999874 356799999998 699999999999999999999999999999
Q ss_pred chhhcccC------------C--CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 424 SVWINDKG------------G--KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 424 ~~~l~~~~------------~--~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
.++++..+ . ..++..+.+.++.|||.|++||++ .+++||||..+|||+.++..+||+|||+++
T Consensus 390 ~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVLi~~~~~~kIaDFGlar 466 (609)
T KOG0200|consen 390 LEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVLITKNKVIKIADFGLAR 466 (609)
T ss_pred HHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEEecCCCEEEEcccccee
Confidence 99996544 0 138899999999999999999998 459999999999999999999999999999
Q ss_pred cccccCCceeeecccc--cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCc
Q 042486 490 PAERQEGEFALTSHIV--GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDG 567 (635)
Q Consensus 490 ~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 567 (635)
........ ...... -...|||||.+....++.++||||||++|||++|...++...-...
T Consensus 467 ~~~~~~~y--~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~---------------- 528 (609)
T KOG0200|consen 467 DHYNKDYY--RTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT---------------- 528 (609)
T ss_pred ccCCCCce--EecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH----------------
Confidence 65443321 111122 2346999999999999999999999999999999554432210000
Q ss_pred hhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042486 568 EESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLN 621 (635)
Q Consensus 568 ~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 621 (635)
.+. -+.+....+-..|..+..++.++++.||+.+|++||++.|+.+.|...+.
T Consensus 529 ~~l-~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 529 EEL-LEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HHH-HHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 111 11223333345566667789999999999999999999999999999765
No 369
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=1.1e-29 Score=262.19 Aligned_cols=237 Identities=17% Similarity=0.178 Sum_probs=165.7
Q ss_pred ceEEEeeeC-----CcEEEEEEecc---ChHH---------------HHHHHhhhccCCcccEEEEEecCC----eeEEE
Q 042486 362 GSVYRGKIG-----GDFVAIKKVYG---DASD---------------QIKLLNKINHSSLIRLLGICFNGG----NWYLV 414 (635)
Q Consensus 362 g~Vy~g~~~-----~~~vavK~~~~---~~~~---------------E~~~l~~l~h~nIv~l~~~~~~~~----~~~lV 414 (635)
|.||+|+.. +..+|+|.... .+.. ++..+..++|+|++++++.+.... ..+++
T Consensus 26 G~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 105 (294)
T PHA02882 26 GCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFIL 105 (294)
T ss_pred ceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecCCceEEEEE
Confidence 899999973 34566664321 1111 122344568999999999776443 34778
Q ss_pred eecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 415 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
+|++. .++.+.+.... ..++..+..|+.|++.||.|||+. +++||||||+|||++.++.++|+|||+++.....
T Consensus 106 ~~~~~-~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~ 179 (294)
T PHA02882 106 LEKLV-ENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYGIASHFIIH 179 (294)
T ss_pred Eehhc-cCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEEEEcCCceeeccC
Confidence 88764 35666654322 257888899999999999999985 4999999999999999999999999999765322
Q ss_pred CCce----eeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhh
Q 042486 495 EGEF----ALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEES 570 (635)
Q Consensus 495 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 570 (635)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||............... +.
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~---------~~ 250 (294)
T PHA02882 180 GKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC---------DF 250 (294)
T ss_pred CcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH---------HH
Confidence 1110 1112346999999999999999999999999999999999999999754322211110000 00
Q ss_pred hhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 571 LRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 571 l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
+..+..+... ....+..+.+++..|+..+|++||+++++.+.|
T Consensus 251 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 251 IKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 1111111110 112245689999999999999999999999876
No 370
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=6.1e-31 Score=283.63 Aligned_cols=232 Identities=27% Similarity=0.386 Sum_probs=179.6
Q ss_pred cceEEEeeeCCcEEEEEEeccC----hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc--CCC
Q 042486 361 KGSVYRGKIGGDFVAIKKVYGD----ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK--GGK 433 (635)
Q Consensus 361 gg~Vy~g~~~~~~vavK~~~~~----~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~--~~~ 433 (635)
|+.||+|.+.++.||||++-.+ +.+|++.|+.- +|||||++++.-.+++..|+..|.|. .+|++++... ...
T Consensus 523 Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~ 601 (903)
T KOG1027|consen 523 GTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVE 601 (903)
T ss_pred CcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchh
Confidence 3689999999999999999765 45899999988 69999999999889999999999994 5999999663 111
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC-----CCcEEEeeecCcccccccCCceeeecccccCC
Q 042486 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-----DFRAKIANFALARPAERQEGEFALTSHIVGTK 508 (635)
Q Consensus 434 ~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~-----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 508 (635)
...-...+.+..|+++||+|||+.+ ||||||||.||||+. ..+++|+|||+++................||.
T Consensus 602 ~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~ 678 (903)
T KOG1027|consen 602 MQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTS 678 (903)
T ss_pred hcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcc
Confidence 1121345678899999999999976 999999999999965 35799999999998876665555566788999
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhC-CCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSG-KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
+|+|||++....-+...||||+||++|+.++| ..||...-+.+.++..-. ..+..+. . ..++
T Consensus 679 GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~----------~~L~~L~------~-~~d~ 741 (903)
T KOG1027|consen 679 GWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGN----------YTLVHLE------P-LPDC 741 (903)
T ss_pred cccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCc----------cceeeec------c-CchH
Confidence 99999999988888899999999999999997 677753222111111000 0000000 0 0111
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...+||.+|+.+||..||++.+|+.|
T Consensus 742 --eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 742 --EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred --HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 46899999999999999999999854
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=3.9e-30 Score=271.61 Aligned_cols=249 Identities=26% Similarity=0.371 Sum_probs=181.0
Q ss_pred cCCCCCCccc----ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCe------
Q 042486 352 DDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGN------ 410 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~------ 410 (635)
++|.....|| |.||+|+. ++..||||++.. .+.+|+.++++++|+|++++++++...+.
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 3444444443 89999998 578999998753 23468999999999999999998775554
Q ss_pred eEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccc
Q 042486 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490 (635)
Q Consensus 411 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 490 (635)
.++|+||+ +++|.+++... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++..
T Consensus 95 ~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 95 VYLVTHLM-GADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred EEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccccc
Confidence 89999998 67999988652 3899999999999999999999854 99999999999999999999999999876
Q ss_pred ccccCCceeeecccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC---
Q 042486 491 AERQEGEFALTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED--- 566 (635)
Q Consensus 491 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~--- 566 (635)
.... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... .+..... ......
T Consensus 168 ~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~-~~~~~~~~~ 239 (343)
T cd07851 168 TDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMN-LVGTPDEEL 239 (343)
T ss_pred cccc------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH-hcCCCCHHH
Confidence 5332 122457888999998865 467899999999999999999999886432211 1111111 000000
Q ss_pred ----chhhhhhhcCCcC---CCCC---ChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 567 ----GEESLRHLMDPSM---QGNY---PPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 567 ----~~~~l~~~~d~~~---~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.......++.... ...+ ....+..+.+++.+||+.||++|||+.||+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0000011111000 0000 01124568999999999999999999999875
No 372
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1.6e-29 Score=251.54 Aligned_cols=227 Identities=31% Similarity=0.435 Sum_probs=183.2
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+|+. +++.+|+|++.. .+.+|++.+++++|+|++++++++......++++||+++++|.+++....
T Consensus 3 g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~ 82 (244)
T smart00220 3 GKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG 82 (244)
T ss_pred eEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc
Confidence 78999998 468999999853 45689999999999999999999999899999999999999999996544
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
. +++..+..++.+++.++.|||+.+ ++|+||+|+||++++++.++|+|||.+....... ......++..|+
T Consensus 83 ~--~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~~~~ 153 (244)
T smart00220 83 R--LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----LLTTFVGTPEYM 153 (244)
T ss_pred C--CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc----ccccccCCcCCC
Confidence 3 899999999999999999999854 9999999999999999999999999998665432 223356788999
Q ss_pred CccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCCh-HHHHH
Q 042486 512 APEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPP-VTAIL 590 (635)
Q Consensus 512 aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~-~~~~~ 590 (635)
+||.+....++.++||||||+++++|++|..|+....+.. ...+... .......... ..+..
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~ 216 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-ELFKKIG----------------KPKPPFPPPEWKISPE 216 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHh----------------ccCCCCccccccCCHH
Confidence 9999988888999999999999999999998875422211 1111111 0000000000 03456
Q ss_pred HHHHHHHhhhcCCCCCCCHHHHHH
Q 042486 591 VIRLIESCLKKDPSGRPAMDKIAQ 614 (635)
Q Consensus 591 l~~li~~cl~~dP~~RPs~~evl~ 614 (635)
+.+++.+|+..+|++||++.++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhh
Confidence 899999999999999999999986
No 373
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=2.8e-29 Score=263.92 Aligned_cols=245 Identities=28% Similarity=0.375 Sum_probs=175.4
Q ss_pred ceEEEeeeC----CcEEEEEEecc---------ChHHHHHHHhhh-ccCCcccEEEEEecC----CeeEEEeecccCCCc
Q 042486 362 GSVYRGKIG----GDFVAIKKVYG---------DASDQIKLLNKI-NHSSLIRLLGICFNG----GNWYLVYENAVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~~----~~~vavK~~~~---------~~~~E~~~l~~l-~h~nIv~l~~~~~~~----~~~~lV~E~~~~gsL 423 (635)
|.||+++.. +..||+|++.. .+.+|+++++++ +|+||+++++.+... ...++++||+. ++|
T Consensus 14 g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L 92 (332)
T cd07857 14 GIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADL 92 (332)
T ss_pred eEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCH
Confidence 899999983 66899998764 245689999999 599999999976432 34688899885 689
Q ss_pred chhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc-eeeec
Q 042486 424 SVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE-FALTS 502 (635)
Q Consensus 424 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~ 502 (635)
.+++.... .+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++........ .....
T Consensus 93 ~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 167 (332)
T cd07857 93 HQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMT 167 (332)
T ss_pred HHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCceeccccccccccccc
Confidence 99885433 4899999999999999999999855 999999999999999999999999999755432211 11122
Q ss_pred ccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCC----
Q 042486 503 HIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDP---- 577 (635)
Q Consensus 503 ~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~---- 577 (635)
...|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+... .+..... .+.... .+.+..+.++
T Consensus 168 ~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 244 (332)
T cd07857 168 EYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD-QLNQILQ-VLGTPD-EETLSRIGSPKAQN 244 (332)
T ss_pred CcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH-HHHHHHH-HhCCCC-HHHHHhhhhhhHHH
Confidence 3568899999998765 468899999999999999999998876433221 1111110 000000 0001110000
Q ss_pred -------cCCC---CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 578 -------SMQG---NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 578 -------~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.... .........+.+++.+||+.||++||+++|++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 245 YIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000 0001124568999999999999999999999866
No 374
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.1e-30 Score=269.47 Aligned_cols=221 Identities=24% Similarity=0.314 Sum_probs=177.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC---hHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---ASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFL 435 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l 435 (635)
+.|-++.. +++..++|.+.+. ..+|+.++.+. +|+||+++.+.+.++.+.|+|||.+.++-|.+.+..... .
T Consensus 336 s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~--~ 413 (612)
T KOG0603|consen 336 SAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPE--F 413 (612)
T ss_pred cceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcch--h
Confidence 44555554 6778899988665 67888777766 799999999999999999999999999988777754432 2
Q ss_pred CHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEE-CCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 436 DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL-DTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 436 ~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
. ..+..|+.+|+.|+.|||+++ +|||||||+|||+ ++.+.++|+|||.++..... ....+-|..|.|||
T Consensus 414 ~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~------~~tp~~t~~y~APE 483 (612)
T KOG0603|consen 414 C-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS------CDTPALTLQYVAPE 483 (612)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh------hcccchhhcccChh
Confidence 3 677789999999999999955 9999999999999 68899999999999866543 12346788999999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHH
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRL 594 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~l 594 (635)
++....+++++|+||||++||+|++|+.|+.....+. +....+..+. +....+....+|
T Consensus 484 vl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~-----------------ei~~~i~~~~----~s~~vS~~AKdL 542 (612)
T KOG0603|consen 484 VLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI-----------------EIHTRIQMPK----FSECVSDEAKDL 542 (612)
T ss_pred hhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH-----------------HHHHhhcCCc----cccccCHHHHHH
Confidence 9999999999999999999999999999986543331 1111222221 124456668999
Q ss_pred HHHhhhcCCCCCCCHHHHHHH
Q 042486 595 IESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 595 i~~cl~~dP~~RPs~~evl~~ 615 (635)
+.+||+.||.+||+|+++..+
T Consensus 543 l~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 543 LQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred HHHhccCChhhCcChhhhccC
Confidence 999999999999999999887
No 375
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=245.90 Aligned_cols=258 Identities=20% Similarity=0.295 Sum_probs=191.0
Q ss_pred ccHHHHHHhhcCCCCCCcccceEEEeee--CCcEEEEEEecc-------ChHHHHHHHhhh-ccCCcccEEEEEecCCee
Q 042486 342 YTFEELQAATDDFNPSCWIKGSVYRGKI--GGDFVAIKKVYG-------DASDQIKLLNKI-NHSSLIRLLGICFNGGNW 411 (635)
Q Consensus 342 ~~~~el~~at~~f~~~~~igg~Vy~g~~--~~~~vavK~~~~-------~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 411 (635)
-+|+|+.+.|++.-.++-- ++|-.++. +|..+|||.+.+ .+.+|++++.+. .|+||+.|+++|+++..+
T Consensus 73 g~F~d~YkLt~e~LGeGAy-asVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~F 151 (463)
T KOG0607|consen 73 GKFEDMYKLTSELLGEGAY-ASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRF 151 (463)
T ss_pred chHHHHHHhHHHHhcCccc-eeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceE
Confidence 4577888888776544322 55655543 899999999865 356899999998 599999999999999999
Q ss_pred EEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC---cEEEeeecCc
Q 042486 412 YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF---RAKIANFALA 488 (635)
Q Consensus 412 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~---~~kl~Dfg~a 488 (635)
|||||-|.||+|..++.++. .+++.+..++.++|+.||.|||. ++|.|||+||+|||..+.. -+||+||.++
T Consensus 152 YLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLg 226 (463)
T KOG0607|consen 152 YLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDFDLG 226 (463)
T ss_pred EEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeeccccc
Confidence 99999999999999996653 48999999999999999999998 4599999999999996554 4899999987
Q ss_pred ccccccCCc----eeeecccccCCCccCccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhh
Q 042486 489 RPAERQEGE----FALTSHIVGTKGYMAPEYLE-----NGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLN 559 (635)
Q Consensus 489 ~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~ 559 (635)
.-......- .......+|+..|||||+.. ...|+.++|.|||||++|-|++|.+||...-+++-.+
T Consensus 227 Sg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW----- 301 (463)
T KOG0607|consen 227 SGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW----- 301 (463)
T ss_pred cccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc-----
Confidence 643322111 11123467888999999874 3468899999999999999999999997543322100
Q ss_pred cccccCC---c-hhhhhhhcCCcCCCCCC----hHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 042486 560 PVLHKED---G-EESLRHLMDPSMQGNYP----PVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614 (635)
Q Consensus 560 ~~~~~~~---~-~~~l~~~~d~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 614 (635)
-.++. . ...+..+.+... ++| ...+.+-.+++...+..|+.+|.++.+++.
T Consensus 302 --drGe~Cr~CQ~~LFesIQEGkY--eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 302 --DRGEVCRVCQNKLFESIQEGKY--EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred --cCCCccHHHHHHHHHHHhccCC--cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 00000 0 111222222221 223 234556789999999999999999998887
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.96 E-value=5e-29 Score=284.10 Aligned_cols=123 Identities=25% Similarity=0.418 Sum_probs=111.6
Q ss_pred ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.||+|.. +++.||||+++. .+..|+.+++.++|+||+++++.+...+..|+||||+.+++|.+++..
T Consensus 18 g~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~ 97 (669)
T cd05610 18 GKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHI 97 (669)
T ss_pred eEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHh
Confidence 89999998 488999999863 355788999999999999999999999999999999999999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
.. .+++..++.|+.||+.||.|||.. +|+||||||+|||++.++.+||+|||+++
T Consensus 98 ~~--~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 98 YG--YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred cC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 43 388999999999999999999985 49999999999999999999999999986
No 377
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=1.6e-29 Score=281.90 Aligned_cols=181 Identities=26% Similarity=0.360 Sum_probs=129.8
Q ss_pred eEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccc
Q 042486 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490 (635)
Q Consensus 411 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 490 (635)
+||-||||+...|.++++++... -.....++++.+|++||.|+|+.+ +|||||||.||++|+++.+||+|||+|..
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLaYIH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLAYIHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATD 746 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHHhCc---eeeccCCcceeEEcCCCCeeecccccchh
Confidence 47888899887777777654321 135677899999999999999955 99999999999999999999999999987
Q ss_pred cc----c----------cC-CceeeecccccCCCccCccccccC---CCCcccchhhHHHHHHHHHhCCCCCCCCcchhh
Q 042486 491 AE----R----------QE-GEFALTSHIVGTKGYMAPEYLENG---LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENM 552 (635)
Q Consensus 491 ~~----~----------~~-~~~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~ 552 (635)
.. . .. ......+..+||.-|+|||.+.+. .|+.|+|+||||++++||+. ||....+.-
T Consensus 747 ~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa- 822 (1351)
T KOG1035|consen 747 LKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERA- 822 (1351)
T ss_pred hhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHH-
Confidence 21 0 00 011122456899999999999764 49999999999999999986 343222221
Q ss_pred HHHHhhhcccccCCchhhhhhhcCCcCCCC--CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 553 LLVDVLNPVLHKEDGEESLRHLMDPSMQGN--YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 553 ~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..+..+.++.+... +.......=..+|++|++.||.+|||+.|++..
T Consensus 823 ----------------~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 823 ----------------SILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred ----------------HHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence 12222222222222 111122234789999999999999999998863
No 378
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=7e-29 Score=222.47 Aligned_cols=246 Identities=26% Similarity=0.327 Sum_probs=186.2
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|+||||+. +++.||+|+++-+ ..+|+-+|+.++|.|||++++....+...-+|+|||. .+|..+....
T Consensus 16 gtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd-qdlkkyfdsl 94 (292)
T KOG0662|consen 16 GTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSL 94 (292)
T ss_pred eeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-HHHHHHHHhc
Confidence 99999987 6789999998643 4689999999999999999999999999999999995 4888888654
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
.+. ++.+....++.|+++||.|+|++. +.|||+||.|.+|+.+|++|++|||+++..+-.- ...+..+.|..|
T Consensus 95 ng~-~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipv---rcysaevvtlwy 167 (292)
T KOG0662|consen 95 NGD-LDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV---RCYSAEVVTLWY 167 (292)
T ss_pred CCc-CCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCce---Eeeeceeeeeec
Confidence 433 899999999999999999999966 9999999999999999999999999998665432 122334678999
Q ss_pred cCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhccc-ccCCchhhhhhhcCCcCCCCCChH--
Q 042486 511 MAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVL-HKEDGEESLRHLMDPSMQGNYPPV-- 586 (635)
Q Consensus 511 ~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~-~~~~~~~~l~~~~d~~~~~~~~~~-- 586 (635)
++|.++.+ ..|+...|+||-||++.|+.....|.....+-...+...+..+- ..++....+.++-|-..-..+|..
T Consensus 168 rppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypatts 247 (292)
T KOG0662|consen 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTS 247 (292)
T ss_pred cCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccch
Confidence 99999876 45899999999999999998866564433332222322222111 111222333344443333333321
Q ss_pred -------HHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 587 -------TAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 587 -------~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
....-++++.+.+.-+|.+|.++++.+++
T Consensus 248 wsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 248 WSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred HHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 22234789999999999999999998765
No 379
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=8.9e-29 Score=268.15 Aligned_cols=231 Identities=24% Similarity=0.377 Sum_probs=185.7
Q ss_pred ceEEEeee--CCcEEEEEEeccC------hHHHHHHHhhh-ccCCcccEEEEEe-----cCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD------ASDQIKLLNKI-NHSSLIRLLGICF-----NGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~------~~~E~~~l~~l-~h~nIv~l~~~~~-----~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+++. +++.+|+|+...+ ...|.++|+.+ +|||++.++|++. .+++++||||||.+||..|++
T Consensus 33 gkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLV 112 (953)
T KOG0587|consen 33 GKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLV 112 (953)
T ss_pred eeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHH
Confidence 67777765 8899999988543 34566778777 7999999999987 357899999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
+...+..+.|..+..|+..++.||.+||.. .++|||||-.|||++.++.+||.|||.+....... .......||
T Consensus 113 Kn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~---grRnT~iGt 186 (953)
T KOG0587|consen 113 KNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTV---GRRNTFIGT 186 (953)
T ss_pred hhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeeeeccc---ccccCcCCC
Confidence 766567799999999999999999999984 49999999999999999999999999987665433 234557899
Q ss_pred CCccCcccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCC
Q 042486 508 KGYMAPEYLEN-----GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGN 582 (635)
Q Consensus 508 ~~y~aPE~~~~-----~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~ 582 (635)
+.|||||++.. ..|+.++|+||||++..||.-|.+|+.....- +..+.-..+|...-.
T Consensus 187 P~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm-----------------raLF~IpRNPPPkLk 249 (953)
T KOG0587|consen 187 PYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM-----------------RALFLIPRNPPPKLK 249 (953)
T ss_pred cccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh-----------------hhhccCCCCCCcccc
Confidence 99999999853 45778999999999999999999886422111 111111123333334
Q ss_pred CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 583 YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 583 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.|.....++.++|..||..|-++||++.++++|
T Consensus 250 rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 250 RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred chhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 566778889999999999999999999998764
No 380
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=250.99 Aligned_cols=244 Identities=19% Similarity=0.250 Sum_probs=181.4
Q ss_pred ceEEEeee--CCcEEEEEEecc------ChHHHHHHHhhhcc--C----CcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG------DASDQIKLLNKINH--S----SLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~------~~~~E~~~l~~l~h--~----nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.|-+..+ .+..||||+++. ...-|+++|.++++ | -++.+.++|.-.++.|+|+|.+ |-|+.+++
T Consensus 103 GkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFl 181 (415)
T KOG0671|consen 103 GKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFL 181 (415)
T ss_pred cceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHh
Confidence 66776655 578999998864 34568999999943 2 2778888898899999999987 66999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC--------------------CCcEEEeeecC
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT--------------------DFRAKIANFAL 487 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~--------------------~~~~kl~Dfg~ 487 (635)
..+...+++...+..|+.|++++++|||+.+ ++|.||||+|||+.+ +..++|+|||.
T Consensus 182 k~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGs 258 (415)
T KOG0671|consen 182 KENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGS 258 (415)
T ss_pred ccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCC
Confidence 8877778999999999999999999999955 999999999999931 34589999999
Q ss_pred cccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchh-hHHHHhhhccccc--
Q 042486 488 ARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEEN-MLLVDVLNPVLHK-- 564 (635)
Q Consensus 488 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~-~~l~~~~~~~~~~-- 564 (635)
|+...... ...+.|..|+|||++.+-.++.++||||+||||+||.||...|...++.+ ..+.+.+...+..
T Consensus 259 Atf~~e~h------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~m 332 (415)
T KOG0671|consen 259 ATFDHEHH------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRM 332 (415)
T ss_pred cceeccCc------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHH
Confidence 98665433 34678999999999999999999999999999999999998887654322 1111111111000
Q ss_pred ---CCchhh----------------hhhhcCCcC----CCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 565 ---EDGEES----------------LRHLMDPSM----QGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 565 ---~~~~~~----------------l~~~~d~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
...++. .+...++-. .-.....+...|.+|+++||..||.+|+|+.|++.+
T Consensus 333 i~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 333 IKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred hhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 000000 000111000 001123456679999999999999999999999875
No 381
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=280.44 Aligned_cols=255 Identities=25% Similarity=0.281 Sum_probs=202.1
Q ss_pred HHHHHhhcCCCCCCccc----ceEEEeee--CCcEEEEEEecc----------ChHHHHHHHhhhccCCcccEEEEEecC
Q 042486 345 EELQAATDDFNPSCWIK----GSVYRGKI--GGDFVAIKKVYG----------DASDQIKLLNKINHSSLIRLLGICFNG 408 (635)
Q Consensus 345 ~el~~at~~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~----------~~~~E~~~l~~l~h~nIv~l~~~~~~~ 408 (635)
.+++-..++|.....|| |.|...+. +++.+|+|++.+ .|..|-++|.--+.+-|++++-.|.++
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 34444555666555555 88888876 788999998854 267889999988999999999999999
Q ss_pred CeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCc
Q 042486 409 GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488 (635)
Q Consensus 409 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 488 (635)
.++|+|||||+||+|-.++.+.. .+++.....++..|+.||.-||+.| +|||||||+|||||..|++||+|||.+
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhH
Confidence 99999999999999999997765 4899989999999999999999977 999999999999999999999999998
Q ss_pred ccccccCCceeeecccccCCCccCccccc----c-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccc
Q 042486 489 RPAERQEGEFALTSHIVGTKGYMAPEYLE----N-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLH 563 (635)
Q Consensus 489 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~ 563 (635)
-.+.... .......+|||.|++||++. + +.|++.+|.||+||++|||+.|..||...+
T Consensus 223 lkm~~dG--~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads--------------- 285 (1317)
T KOG0612|consen 223 LKMDADG--TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS--------------- 285 (1317)
T ss_pred HhcCCCC--cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH---------------
Confidence 7665432 24456679999999999985 3 679999999999999999999999985311
Q ss_pred cCCchhhhhhhcCCcCCCCCC--hHHHHHHHHHHHHhhhcCCCCCCC---HHHHHHHHHHHHhhcccccc
Q 042486 564 KEDGEESLRHLMDPSMQGNYP--PVTAILVIRLIESCLKKDPSGRPA---MDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 564 ~~~~~~~l~~~~d~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~L~~~~~~s~~w~~ 628 (635)
.-+...++++-.-.-.+| .+.+....+||.+.+. +|+.|.. ++++..| .+-...+|+.
T Consensus 286 ---lveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H---pFF~g~~W~~ 348 (1317)
T KOG0612|consen 286 ---LVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH---PFFEGIDWDN 348 (1317)
T ss_pred ---HHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC---ccccCCChhh
Confidence 113333444432222333 3456678899988776 6778877 8877776 4556688865
No 382
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.95 E-value=3.2e-29 Score=256.61 Aligned_cols=237 Identities=26% Similarity=0.363 Sum_probs=187.4
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|+||-|+. +|+.||||.+.+ ..++|+.||.+++||.||.+...|+..+..+.|||-+.|.-|+-.|...
T Consensus 578 G~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsE 657 (888)
T KOG4236|consen 578 GTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSE 657 (888)
T ss_pred eeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhh
Confidence 89999987 899999998843 3578999999999999999999999999999999999554444444433
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC---CcEEEeeecCcccccccCCceeeecccccC
Q 042486 431 GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD---FRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 431 ~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
. ..|++..-..++.||+.||.|||. ++|+|+||||+|||+.+. ..+||||||+|+.++... ..+..+||
T Consensus 658 k-gRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks----FRrsVVGT 729 (888)
T KOG4236|consen 658 K-GRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS----FRRSVVGT 729 (888)
T ss_pred c-ccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhh----hhhhhcCC
Confidence 3 338998888899999999999998 559999999999999543 579999999999887643 34567999
Q ss_pred CCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHH
Q 042486 508 KGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVT 587 (635)
Q Consensus 508 ~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~ 587 (635)
+.|+|||++.+..|....|+||.||++|--++|..||...++-. +.+.. .++|-|. +...+.
T Consensus 730 PAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn----dQIQN-----------AaFMyPp---~PW~ei 791 (888)
T KOG4236|consen 730 PAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN----DQIQN-----------AAFMYPP---NPWSEI 791 (888)
T ss_pred ccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh----HHhhc-----------cccccCC---Cchhhc
Confidence 99999999999999999999999999999999999986332211 11110 1122211 122344
Q ss_pred HHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhcccc
Q 042486 588 AILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNASLAW 626 (635)
Q Consensus 588 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w 626 (635)
+....+||...|+..-.+|-|.+.-+.+ -|+++-..|
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk~lsh--~Wlq~yq~w 828 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDKSLSH--PWLQDYQTW 828 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHhhccc--hhhhcchHH
Confidence 5567899999999999999999987776 345555555
No 383
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.95 E-value=1.1e-28 Score=274.64 Aligned_cols=255 Identities=17% Similarity=0.176 Sum_probs=165.7
Q ss_pred hhcCCCCCCccc----ceEEEeee--C----CcEEEEEEeccChHHHHHHHhhhcc---CCcccEEEE------EecCCe
Q 042486 350 ATDDFNPSCWIK----GSVYRGKI--G----GDFVAIKKVYGDASDQIKLLNKINH---SSLIRLLGI------CFNGGN 410 (635)
Q Consensus 350 at~~f~~~~~ig----g~Vy~g~~--~----~~~vavK~~~~~~~~E~~~l~~l~h---~nIv~l~~~------~~~~~~ 410 (635)
..++|.....|| |.||+|+. + +..||||++......|..+..++.| .++..+... +..+..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDE 209 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCc
Confidence 445666666676 89999998 4 6799999987765556555555433 223222221 235667
Q ss_pred eEEEeecccCCCcchhhcccCCC------------------CCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCE
Q 042486 411 WYLVYENAVNGSLSVWINDKGGK------------------FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNV 472 (635)
Q Consensus 411 ~~lV~E~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NI 472 (635)
.++||||+.+++|.+++...... ...+..+..++.|++.||.|||+. +|+||||||+||
T Consensus 210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~NI 286 (566)
T PLN03225 210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQNI 286 (566)
T ss_pred eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHHE
Confidence 89999999999999988543210 112344567999999999999985 499999999999
Q ss_pred EECC-CCcEEEeeecCcccccccCCceeeecccccCCCccCccccccC----------------------CCCcccchhh
Q 042486 473 LLDT-DFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENG----------------------LVSTKLDVYA 529 (635)
Q Consensus 473 ll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~ksDV~S 529 (635)
|+++ ++.+||+|||+++....... .......+++.|+|||.+... .++.++||||
T Consensus 287 Ll~~~~~~~KL~DFGlA~~l~~~~~--~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 287 IFSEGSGSFKIIDLGAAADLRVGIN--YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred EEeCCCCcEEEEeCCCccccccccc--cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 9986 57999999999975533221 223446789999999965322 2345679999
Q ss_pred HHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCC------CChHHHHHHHHHHHHhhhcCC
Q 042486 530 FGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGN------YPPVTAILVIRLIESCLKKDP 603 (635)
Q Consensus 530 lGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~------~~~~~~~~l~~li~~cl~~dP 603 (635)
|||++|||+++..+... +...+...+... ............+....+ ..........+|+.+||+.||
T Consensus 365 lGviL~el~~~~~~~~~---~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDS---NLIQFNRQLKRN---DYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred HHHHHHHHHhCcCCCch---HHHHHHHHHHhc---CCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 99999999997655321 111111111100 000111111111110000 000112235689999999999
Q ss_pred CCCCCHHHHHHH
Q 042486 604 SGRPAMDKIAQS 615 (635)
Q Consensus 604 ~~RPs~~evl~~ 615 (635)
++|||++|+++|
T Consensus 439 ~kR~ta~e~L~H 450 (566)
T PLN03225 439 RQRISAKAALAH 450 (566)
T ss_pred ccCCCHHHHhCC
Confidence 999999999987
No 384
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-28 Score=244.74 Aligned_cols=228 Identities=27% Similarity=0.374 Sum_probs=186.0
Q ss_pred CCCCCCccc----ceEEEeee--CCcEEEEEEeccChH----------HHHHHHhhh-ccCCcccEEEEEecCCeeEEEe
Q 042486 353 DFNPSCWIK----GSVYRGKI--GGDFVAIKKVYGDAS----------DQIKLLNKI-NHSSLIRLLGICFNGGNWYLVY 415 (635)
Q Consensus 353 ~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~~~~~----------~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~ 415 (635)
+|+--..+| |.|..+.. +...+|||.+++++. .|-++|.-. +-|.++.++..|..-+.+|+||
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM 429 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM 429 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence 455444554 77888766 556899999987642 455666555 5678999999999999999999
Q ss_pred ecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccC
Q 042486 416 ENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQE 495 (635)
Q Consensus 416 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 495 (635)
||+.||+|.-.++.-+. +.+....-++.+||-||-+||+. +|+.||||.+||++|.+|.+||+|||+++..--.
T Consensus 430 EyvnGGDLMyhiQQ~Gk--FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~- 503 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQQVGK--FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD- 503 (683)
T ss_pred EEecCchhhhHHHHhcc--cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccccC-
Confidence 99999999999976543 77888889999999999999994 4999999999999999999999999999743222
Q ss_pred CceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhc
Q 042486 496 GEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLM 575 (635)
Q Consensus 496 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 575 (635)
...+...+||+.|+|||++....|+...|.|||||+||||+.|++||+..++ .+.++.++
T Consensus 504 --~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE------------------~elF~aI~ 563 (683)
T KOG0696|consen 504 --GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE------------------DELFQAIM 563 (683)
T ss_pred --CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH------------------HHHHHHHH
Confidence 2446678999999999999999999999999999999999999999865333 34445555
Q ss_pred CCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCC
Q 042486 576 DPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA 608 (635)
Q Consensus 576 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 608 (635)
+... .||...+.+..++.+..|...|.+|.-
T Consensus 564 ehnv--syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 564 EHNV--SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred HccC--cCcccccHHHHHHHHHHhhcCCccccC
Confidence 5433 567777888899999999999999953
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-28 Score=246.50 Aligned_cols=236 Identities=22% Similarity=0.368 Sum_probs=183.9
Q ss_pred ceEEEeee--CCcEEEEEEec--c------------ChHHHHHHHhhhccCCcccEEEEEe-cCCeeEEEeecccCCCcc
Q 042486 362 GSVYRGKI--GGDFVAIKKVY--G------------DASDQIKLLNKINHSSLIRLLGICF-NGGNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~--~------------~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~lV~E~~~~gsL~ 424 (635)
..|||+.+ ..+.||||.-. + ...+|.+|.+.|.||.||++++++. +.+.+|-|+|||+|.+|+
T Consensus 477 SEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLD 556 (775)
T KOG1151|consen 477 SEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLD 556 (775)
T ss_pred HHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchh
Confidence 47999976 78899999752 1 2447899999999999999999997 567789999999999999
Q ss_pred hhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEEC---CCCcEEEeeecCcccccccCC----c
Q 042486 425 VWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD---TDFRAKIANFALARPAERQEG----E 497 (635)
Q Consensus 425 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~----~ 497 (635)
-||.... .+++++...|+.||+.||.||.+.. ++|||-||||.|||+. .-|.+||+|||+++.+..... .
T Consensus 557 FYLKQhk--lmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdG 633 (775)
T KOG1151|consen 557 FYLKQHK--LMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDG 633 (775)
T ss_pred HHHHhhh--hhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccc
Confidence 9997654 3899999999999999999999976 9999999999999993 458899999999998765432 2
Q ss_pred eeeecccccCCCccCcccccc----CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhh
Q 042486 498 FALTSHIVGTKGYMAPEYLEN----GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH 573 (635)
Q Consensus 498 ~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 573 (635)
...+....||.+|++||.+.- ..++.|.||||.||++|..+.|+.||.........+.+. ..+. ..+
T Consensus 634 meLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN--TIlk-------AtE 704 (775)
T KOG1151|consen 634 MELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN--TILK-------ATE 704 (775)
T ss_pred eeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh--chhc-------cee
Confidence 456677889999999998853 457889999999999999999999986432221111000 0000 000
Q ss_pred hcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 042486 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614 (635)
Q Consensus 574 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 614 (635)
+ .....+..+.+..++|++||++.-++|....++..
T Consensus 705 V-----qFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 705 V-----QFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred c-----cCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 1 11112344556789999999999999998888765
No 386
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.95 E-value=1.6e-29 Score=239.72 Aligned_cols=233 Identities=21% Similarity=0.326 Sum_probs=172.2
Q ss_pred ceEEEeee--CCcEEEEEEeccCh--------HHHHHHH-hhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhc--
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGDA--------SDQIKLL-NKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIN-- 428 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~~--------~~E~~~l-~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~-- 428 (635)
|+|+|-.. .|+..|||+++-.. ..|.+.. +.-+.||||+++|.+..++..++.||.|. .||+.+..
T Consensus 78 G~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~SlDklYk~v 156 (361)
T KOG1006|consen 78 GTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-ISLDKLYKRV 156 (361)
T ss_pred hhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hhHHHHHHHH
Confidence 89998776 79999999997532 2233322 22368999999999999999999999984 47765542
Q ss_pred -ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccC
Q 042486 429 -DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGT 507 (635)
Q Consensus 429 -~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 507 (635)
......+++...-+|..-.++||.||.+ ...|+|||+||+|||+|..|.+||||||.+-.....- ..+.-.|.
T Consensus 157 y~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si----AkT~daGC 230 (361)
T KOG1006|consen 157 YSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI----AKTVDAGC 230 (361)
T ss_pred HHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHH----HhhhccCC
Confidence 2223348888888999999999999987 3569999999999999999999999999986543221 12334688
Q ss_pred CCccCcccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCC-CC
Q 042486 508 KGYMAPEYLEN--GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGN-YP 584 (635)
Q Consensus 508 ~~y~aPE~~~~--~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~-~~ 584 (635)
..|||||.+.. ..|+.++||||||++|+|+.||+.|+..++.--..+...+ .+.. |.+..+ ..
T Consensus 231 rpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv----~gdp----------p~l~~~~~~ 296 (361)
T KOG1006|consen 231 RPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV----IGDP----------PILLFDKEC 296 (361)
T ss_pred ccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH----cCCC----------CeecCcccc
Confidence 89999999863 3489999999999999999999999754433211111111 1110 111111 11
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 585 PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 585 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
......+..+|..|+..|-.+||...++.++
T Consensus 297 ~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 297 VHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 2356679999999999999999999998764
No 387
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=6.1e-29 Score=233.96 Aligned_cols=250 Identities=26% Similarity=0.366 Sum_probs=178.0
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEec--------CCeeEEEeecccCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFN--------GGNWYLVYENAVNGS 422 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~--------~~~~~lV~E~~~~gs 422 (635)
|.||+++. .++.||+|++.- +..+|+++|..++|+|++.++..|.. ...+|+||++|+. +
T Consensus 31 geVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-D 109 (376)
T KOG0669|consen 31 GEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-D 109 (376)
T ss_pred HHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-h
Confidence 67887766 677899987632 35689999999999999999998863 2358999999976 7
Q ss_pred cchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc-eeee
Q 042486 423 LSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE-FALT 501 (635)
Q Consensus 423 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~ 501 (635)
|.-+|.... ..++...+.+++.++..||.|+|.. .|+|||+|+.|+||+.++.+||+|||+++........ ....
T Consensus 110 LaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kpry 185 (376)
T KOG0669|consen 110 LAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRY 185 (376)
T ss_pred HHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCc
Confidence 888886543 2388999999999999999999984 4999999999999999999999999999765433221 1122
Q ss_pred cccccCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhh-HHHHhhhc-----ccccCCchhhhhhh
Q 042486 502 SHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENM-LLVDVLNP-----VLHKEDGEESLRHL 574 (635)
Q Consensus 502 ~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~-~l~~~~~~-----~~~~~~~~~~l~~~ 574 (635)
...+.|..|++||.+.+ ..++++.|||.-||++.||+|+.+.+....+... .+...+-. ++..-+.-+....+
T Consensus 186 tnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~si 265 (376)
T KOG0669|consen 186 TNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSI 265 (376)
T ss_pred ccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhc
Confidence 34567999999998875 6799999999999999999999977655433221 11111111 11110111111111
Q ss_pred cCCcCC-CCC--------ChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 575 MDPSMQ-GNY--------PPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 575 ~d~~~~-~~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
--+.+. +.+ |..-.....+|+..++..||.+|+.+++++.+-
T Consensus 266 e~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 266 ELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred cCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 111010 000 111123467899999999999999999988763
No 388
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=9.4e-29 Score=252.63 Aligned_cols=237 Identities=22% Similarity=0.324 Sum_probs=192.5
Q ss_pred ceEEEeeeCCcE--EEEEEeccC----------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKIGGDF--VAIKKVYGD----------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~~~~~--vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|.|=..+.+++. .|+|.+++. +..|-.+|.+.+.+.||+++.-|.+....|++||-|-||.|+..|++
T Consensus 434 GRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrd 513 (732)
T KOG0614|consen 434 GRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRD 513 (732)
T ss_pred ceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhh
Confidence 788888876655 788877542 45688899999999999999999999999999999999999999977
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
++. ++......++..+.+|++|||+.+ ||.|||||+|.++|.+|.+||.|||+|+...... .+..++||+.
T Consensus 514 Rg~--Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~----KTwTFcGTpE 584 (732)
T KOG0614|consen 514 RGS--FDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR----KTWTFCGTPE 584 (732)
T ss_pred cCC--cccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCC----ceeeecCCcc
Confidence 654 888888889999999999999955 9999999999999999999999999999876654 4667899999
Q ss_pred ccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 510 YMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 510 y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
|.|||++.+...+...|.||||+++|||++|++||...+.- ..+..+ +...-.-.+|.....
T Consensus 585 YVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm--ktYn~I----------------LkGid~i~~Pr~I~k 646 (732)
T KOG0614|consen 585 YVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM--KTYNLI----------------LKGIDKIEFPRRITK 646 (732)
T ss_pred cccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH--HHHHHH----------------Hhhhhhhhcccccch
Confidence 99999999999999999999999999999999998654321 111111 111111234455555
Q ss_pred HHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHHhhcccccc
Q 042486 590 LVIRLIESCLKKDPSGRPA-----MDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs-----~~evl~~L~~~~~~s~~w~~ 628 (635)
...+|+++.+..+|.+|.- +.+|-+| +|+ ..+||+-
T Consensus 647 ~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH--~Wf-~gfdweg 687 (732)
T KOG0614|consen 647 TATDLIKKLCRDNPTERLGYQKGGINDIKKH--RWF-EGFDWEG 687 (732)
T ss_pred hHHHHHHHHHhcCcHhhhccccCChHHHHhh--hhh-hcCChhh
Confidence 6789999999999999976 6677766 344 3588875
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.94 E-value=7.6e-27 Score=253.84 Aligned_cols=253 Identities=22% Similarity=0.184 Sum_probs=169.7
Q ss_pred hcCCCCCCccc----ceEEEeee------------------CCcEEEEEEeccC-------h--------------HHHH
Q 042486 351 TDDFNPSCWIK----GSVYRGKI------------------GGDFVAIKKVYGD-------A--------------SDQI 387 (635)
Q Consensus 351 t~~f~~~~~ig----g~Vy~g~~------------------~~~~vavK~~~~~-------~--------------~~E~ 387 (635)
.++|...+.|| |.||+|.. .++.||||+++.+ + ..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56777777776 89999964 3467999998532 1 2366
Q ss_pred HHHhhhccCCc-----ccEEEEEec--------CCeeEEEeecccCCCcchhhcccC----------------------C
Q 042486 388 KLLNKINHSSL-----IRLLGICFN--------GGNWYLVYENAVNGSLSVWINDKG----------------------G 432 (635)
Q Consensus 388 ~~l~~l~h~nI-----v~l~~~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~----------------------~ 432 (635)
.++.+++|.++ ++++++|.. ++..+|||||+++++|.++++... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 67777776654 677887753 356799999999999999885321 1
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
..+++..+..++.|++.+|.|||+.+ |+||||||+||+++.++.+||+|||++........ .......+++.|+|
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~--~~~~~g~~tp~Y~a 378 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN--FNPLYGMLDPRYSP 378 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc--cCccccCCCcceeC
Confidence 12467788999999999999999854 99999999999999999999999999875432211 11112335789999
Q ss_pred ccccccCCC----------------------CcccchhhHHHHHHHHHhCCC-CCCCCcchhhHHHHhhhcccccCCchh
Q 042486 513 PEYLENGLV----------------------STKLDVYAFGVLMLEMLSGKE-APALYSEENMLLVDVLNPVLHKEDGEE 569 (635)
Q Consensus 513 PE~~~~~~~----------------------s~ksDV~SlGvvl~elltG~~-p~~~~~~~~~~l~~~~~~~~~~~~~~~ 569 (635)
||.+..... ..+.||||+||++++|++|.. |+.....-...+... .....
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~-------~~~~~ 451 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQY-------DNDLN 451 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhc-------cchHH
Confidence 998754321 234799999999999999986 432111000000000 00000
Q ss_pred hhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCC---CCCCCHHHHHHH
Q 042486 570 SLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDP---SGRPAMDKIAQS 615 (635)
Q Consensus 570 ~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~~ 615 (635)
..+....................+|+.+||..+| .+|+|++|+++|
T Consensus 452 ~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 452 RWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred HHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 0111111111111112234567899999999766 689999999976
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=7.6e-27 Score=227.58 Aligned_cols=253 Identities=23% Similarity=0.382 Sum_probs=185.8
Q ss_pred cCCCCCCccc-c---eEEEeee--CCcEEEEEEeccChH----------HHHHHHhhh-ccCCcccEEEEEecCCeeEEE
Q 042486 352 DDFNPSCWIK-G---SVYRGKI--GGDFVAIKKVYGDAS----------DQIKLLNKI-NHSSLIRLLGICFNGGNWYLV 414 (635)
Q Consensus 352 ~~f~~~~~ig-g---~Vy~g~~--~~~~vavK~~~~~~~----------~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV 414 (635)
++|..-..|| | .|-.++. +.+.+|+|.++++.. .|-.+..+- +||.+|-++.+|..+..+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 3455555555 3 3444444 678899999877543 244444443 799999999999999999999
Q ss_pred eecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 415 YENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 415 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
.||++||+|.-++++... |+++....+..+|+.||.|||+.+ |+.||||.+|+|+|.+|.+||+|+|+++..-..
T Consensus 330 ieyv~ggdlmfhmqrqrk--lpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQRK--LPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEecCcceeeehhhhhc--CcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 999999999888865433 899999999999999999999954 999999999999999999999999999854332
Q ss_pred CCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhh-
Q 042486 495 EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRH- 573 (635)
Q Consensus 495 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~- 573 (635)
. ..++.++||+.|.|||.+.+..|....|.|+|||+++||+.|+.||+.-..++ ...+.+..+-+
T Consensus 405 g---d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n-----------~d~ntedylfqv 470 (593)
T KOG0695|consen 405 G---DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN-----------PDMNTEDYLFQV 470 (593)
T ss_pred C---cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCC-----------cccchhHHHHHH
Confidence 2 34677899999999999999999999999999999999999999997422111 00111111111
Q ss_pred hcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCC------HHHHHHHHHHHHhhcccccc
Q 042486 574 LMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPA------MDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 574 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~~L~~~~~~s~~w~~ 628 (635)
++...+ ..|...+.....+++.-|..||++|.. +.++..+ -+-.++||+.
T Consensus 471 ilekqi--riprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h---~ffr~idwd~ 526 (593)
T KOG0695|consen 471 ILEKQI--RIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSH---AFFRSIDWDL 526 (593)
T ss_pred Hhhhcc--cccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcc---hhhhhCCHHH
Confidence 122111 234444455678899999999999853 2333332 2333688875
No 391
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4.3e-26 Score=232.86 Aligned_cols=110 Identities=31% Similarity=0.378 Sum_probs=96.3
Q ss_pred ceEEEeee--CCcEEEEEEecc------ChHHHHHHHhhhc-----c---CCcccEEEEEec----CCeeEEEeecccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG------DASDQIKLLNKIN-----H---SSLIRLLGICFN----GGNWYLVYENAVNG 421 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~------~~~~E~~~l~~l~-----h---~nIv~l~~~~~~----~~~~~lV~E~~~~g 421 (635)
.+||.+-+ +.+.||+|+++. ...+||++|++++ | .+||+|+++|.. +.+.|||+|++ |.
T Consensus 92 STVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-Gd 170 (590)
T KOG1290|consen 92 STVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GD 170 (590)
T ss_pred ceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hh
Confidence 79999987 788999999975 3568999999983 2 469999999984 56789999988 77
Q ss_pred CcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEE
Q 042486 422 SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474 (635)
Q Consensus 422 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll 474 (635)
+|..++.....+.++...+.+|+.||+.||.|||.. .+|||.||||+|||+
T Consensus 171 nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 171 NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLL 221 (590)
T ss_pred HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeee
Confidence 999999776667799999999999999999999984 479999999999999
No 392
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=7.6e-27 Score=217.05 Aligned_cols=237 Identities=19% Similarity=0.292 Sum_probs=179.6
Q ss_pred ceEEEeee--CCcEEEEEEecc----ChHHHHHHHhhhc-cCCcccEEEEEecCC--eeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG----DASDQIKLLNKIN-HSSLIRLLGICFNGG--NWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~----~~~~E~~~l~~l~-h~nIv~l~~~~~~~~--~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
+.||.|.. ++..++||.+++ .+.+|+.+|..+. |+||++|++...+.. ...|++||..+.+...+...
T Consensus 52 SEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~t--- 128 (338)
T KOG0668|consen 52 SEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPT--- 128 (338)
T ss_pred hhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhhh---
Confidence 57888874 788999999865 5789999999996 999999999998654 46899999999877666533
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC-CcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
|+..++...+.+++.||.|+|+.| |.|||+||.|++||.. -.++|+|+|+|.+...... ....+.+..|-
T Consensus 129 --l~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e----YnVRVASRyfK 199 (338)
T KOG0668|consen 129 --LTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE----YNVRVASRYFK 199 (338)
T ss_pred --hchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCCCce----eeeeeehhhcC
Confidence 777888899999999999999966 9999999999999865 5699999999987765432 12345677788
Q ss_pred Ccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCC-----------------------c
Q 042486 512 APEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKED-----------------------G 567 (635)
Q Consensus 512 aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~-----------------------~ 567 (635)
-||.+.. ..++...|+|||||++..|+..+.||....++...++....- +...+ .
T Consensus 200 GPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV-LGt~el~~Yl~KY~i~Ldp~~~~i~~~~~ 278 (338)
T KOG0668|consen 200 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV-LGTDELYAYLNKYQIDLDPQFEDILGRHS 278 (338)
T ss_pred CchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH-hChHHHHHHHHHHccCCChhHhhHhhccc
Confidence 9998865 568889999999999999999999987655544444333221 11111 0
Q ss_pred hhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 568 EESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 568 ~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+.....++.+.-+ .-...+..+++.+.|..|..+|+|++|.+.|
T Consensus 279 rk~w~~Fi~~~n~----hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 279 RKPWSRFINSENQ----HLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred cccHHHhCCcccc----ccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 1111122222111 1123557899999999999999999998876
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=1.3e-25 Score=217.59 Aligned_cols=197 Identities=35% Similarity=0.571 Sum_probs=171.7
Q ss_pred ceEEEeeeC--CcEEEEEEeccC--------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKIG--GDFVAIKKVYGD--------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~~--~~~vavK~~~~~--------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||+++.. ++.+++|.+... +.+|++.++++.|++++++++++......++++||+.+++|.+++....
T Consensus 7 ~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~ 86 (215)
T cd00180 7 GTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENE 86 (215)
T ss_pred eEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhcc
Confidence 899999995 899999998654 6689999999999999999999999899999999999999999996542
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC-CCcEEEeeecCcccccccCCceeeecccccCCCc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-DFRAKIANFALARPAERQEGEFALTSHIVGTKGY 510 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 510 (635)
..+++..+..++.+++.+|.+||+. +++|+||+|+||+++. ++.++|+|||.+........ ......+...|
T Consensus 87 -~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~ 159 (215)
T cd00180 87 -GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---LLKTIVGTPAY 159 (215)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---hhhcccCCCCc
Confidence 2389999999999999999999985 4999999999999999 89999999999876543321 12234577889
Q ss_pred cCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 511 MAPEYLENG-LVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 511 ~aPE~~~~~-~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
++||.+... ..+.+.|+|++|+++++| .
T Consensus 160 ~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------------~ 188 (215)
T cd00180 160 MAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------------P 188 (215)
T ss_pred cChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------------H
Confidence 999999877 788999999999999999 2
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
.+.+++.+|++.||++||++.++++++
T Consensus 189 ~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 189 ELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 378999999999999999999998753
No 394
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=1.1e-26 Score=238.03 Aligned_cols=245 Identities=23% Similarity=0.277 Sum_probs=181.5
Q ss_pred ceEEEeee--CCcEEEEEEeccC------hHHHHHHHhhhc------cCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD------ASDQIKLLNKIN------HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~------~~~E~~~l~~l~------h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
++|.+|+. .|..||||+++.. -..|+++|++|+ ..|+++|+..|...+++|||||-+ ..+|.+.|
T Consensus 446 s~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~L-slNLRevL 524 (752)
T KOG0670|consen 446 STVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVL 524 (752)
T ss_pred eeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhh-hchHHHHH
Confidence 68888887 5779999999764 347999999995 358999999999999999999976 56999999
Q ss_pred cccC-CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC-CcEEEeeecCcccccccCCceeeecccc
Q 042486 428 NDKG-GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 428 ~~~~-~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
...+ ...|....+..++.|+..||..|-.++ |+|.||||+|||+++. ..+||||||.|......+-. ...
T Consensus 525 KKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneit-----PYL 596 (752)
T KOG0670|consen 525 KKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGSASFASENEIT-----PYL 596 (752)
T ss_pred HHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCcccccccccccc-----HHH
Confidence 6533 345888999999999999999999976 9999999999999875 67899999999877654422 123
Q ss_pred cCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhH-HHHhhhccc-----ccC--------------
Q 042486 506 GTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENML-LVDVLNPVL-----HKE-------------- 565 (635)
Q Consensus 506 gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~-l~~~~~~~~-----~~~-------------- 565 (635)
.+..|.|||++.+-.|+...|+||.||+||||.||+..|.......+. +..-+...+ .+.
T Consensus 597 VSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~ 676 (752)
T KOG0670|consen 597 VSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFL 676 (752)
T ss_pred HHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceE
Confidence 455799999999999999999999999999999999888765444322 111010000 000
Q ss_pred ----C---chhhhh--hhcCC------cC--CCCCC---hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 566 ----D---GEESLR--HLMDP------SM--QGNYP---PVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 566 ----~---~~~~l~--~~~d~------~~--~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
+ ..+... ..+.| .+ ...++ ......|.+|+..||..||++|.|..+.+.|
T Consensus 677 ~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 677 YIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred EEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 0 000000 00001 00 01122 2334568899999999999999999998875
No 395
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=1.1e-26 Score=226.45 Aligned_cols=232 Identities=26% Similarity=0.308 Sum_probs=171.9
Q ss_pred CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecC------CeeEEEeecccCCCcchhhcccCCCC
Q 042486 370 GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNG------GNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 370 ~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
.++.||+|++.. ...+|+.++..++|+||++++.++.-. .+.|+|||+|. .+|...+...
T Consensus 40 ~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~e---- 114 (369)
T KOG0665|consen 40 LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILME---- 114 (369)
T ss_pred ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHHh----
Confidence 678899998743 356899999999999999999999743 35799999994 5888888632
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPE 514 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 514 (635)
++-+.+..|..|++.|++|||+.+ |+||||||+||++..+..+||.|||+++..... ...+..+.|..|.|||
T Consensus 115 lDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~----~~mtpyVvtRyyrape 187 (369)
T KOG0665|consen 115 LDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD----FMMTPYVVTRYYRAPE 187 (369)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhcccCcc----cccCchhheeeccCch
Confidence 677788899999999999999955 999999999999999999999999999855432 2344567889999999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCch---------------------hhh-h
Q 042486 515 YLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE---------------------ESL-R 572 (635)
Q Consensus 515 ~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~---------------------~~l-~ 572 (635)
++.+-.+.+.+||||+||++.||++|+-.|...+. ...+..+...+...+.. -.. +
T Consensus 188 vil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~--idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~ 265 (369)
T KOG0665|consen 188 VILGMGYKENVDIWSVGCIMGELILGTVLFPGKDH--IDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSE 265 (369)
T ss_pred heeccCCcccchhhhhhhHHHHHhhceEEecCchH--HHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhh
Confidence 99887799999999999999999999977653221 11111111111111100 000 0
Q ss_pred hhcCCcCCC--CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 573 HLMDPSMQG--NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 573 ~~~d~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.+-|..... +.++.......+++.+||..||++|.+++++++|
T Consensus 266 ~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 266 LFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 011111110 1112234457899999999999999999999876
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.93 E-value=2.4e-26 Score=210.91 Aligned_cols=187 Identities=24% Similarity=0.347 Sum_probs=147.6
Q ss_pred eEEEeeeCCcEEEEEEeccChH--------HHHHHHhh-hccCCcccEEEEEecCCeeEEEeecccCCCcchhhcc--cC
Q 042486 363 SVYRGKIGGDFVAIKKVYGDAS--------DQIKLLNK-INHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND--KG 431 (635)
Q Consensus 363 ~Vy~g~~~~~~vavK~~~~~~~--------~E~~~l~~-l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~--~~ 431 (635)
.+|+...+|...|+|+++..+. .|+++..+ ..+|.+|.++|...+++..++.||.|. .||+.+-.. ..
T Consensus 63 ekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~ 141 (282)
T KOG0984|consen 63 EKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKK 141 (282)
T ss_pred hheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhc
Confidence 4667777999999999976532 34443333 258999999999999999999999984 588776633 23
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
+...++..+-+|+..+..||.|||+ +-.++|||+||+|||++.+|++|+||||.+-.....-. .+...|...||
T Consensus 142 g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA----kt~daGCkpYm 215 (282)
T KOG0984|consen 142 GGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA----KTMDAGCKPYM 215 (282)
T ss_pred CCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhH----HHHhcCCCccC
Confidence 4458999999999999999999998 46799999999999999999999999999875543221 12245778999
Q ss_pred Ccccccc----CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHH
Q 042486 512 APEYLEN----GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD 556 (635)
Q Consensus 512 aPE~~~~----~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~ 556 (635)
|||.+.. ..|+.|+||||||+.+.||.+++.|+..+...-+.+..
T Consensus 216 aPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkq 264 (282)
T KOG0984|consen 216 APERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ 264 (282)
T ss_pred ChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHH
Confidence 9998853 46899999999999999999999998765544444333
No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=8.6e-26 Score=235.97 Aligned_cols=199 Identities=22% Similarity=0.304 Sum_probs=158.6
Q ss_pred cHHHHHHhhcCCC---CCCccc----ceEEEeee--CCcEEEEEEeccC----------hHHHHHHHhhhccCCcccEEE
Q 042486 343 TFEELQAATDDFN---PSCWIK----GSVYRGKI--GGDFVAIKKVYGD----------ASDQIKLLNKINHSSLIRLLG 403 (635)
Q Consensus 343 ~~~el~~at~~f~---~~~~ig----g~Vy~g~~--~~~~vavK~~~~~----------~~~E~~~l~~l~h~nIv~l~~ 403 (635)
.|-.|.+|.-+-+ .-.-|| |.|..+.- +...+|+|.+++. +..|-+||..-..+-||+|+-
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 4455666654422 222222 78887765 5667899987542 456899999999999999999
Q ss_pred EEecCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEe
Q 042486 404 ICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIA 483 (635)
Q Consensus 404 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 483 (635)
.|.+.+.+|+||||++||++..+|-+.+- +.+.....++.++..|+++.|+.| +|||||||+|||||.+|.+||+
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLIrmgI--FeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLT 771 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLIRMGI--FEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLT 771 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeee
Confidence 99999999999999999999999865543 788888888899999999999966 9999999999999999999999
Q ss_pred eecCccccc---------ccCC---------------c---------------eeeecccccCCCccCccccccCCCCcc
Q 042486 484 NFALARPAE---------RQEG---------------E---------------FALTSHIVGTKGYMAPEYLENGLVSTK 524 (635)
Q Consensus 484 Dfg~a~~~~---------~~~~---------------~---------------~~~~~~~~gt~~y~aPE~~~~~~~s~k 524 (635)
|||++.-.. ..+. . .......+||+.|+|||++....++..
T Consensus 772 DFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~ 851 (1034)
T KOG0608|consen 772 DFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQL 851 (1034)
T ss_pred eccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcccc
Confidence 999985221 0000 0 000122479999999999999899999
Q ss_pred cchhhHHHHHHHHHhCCCCCCC
Q 042486 525 LDVYAFGVLMLEMLSGKEAPAL 546 (635)
Q Consensus 525 sDV~SlGvvl~elltG~~p~~~ 546 (635)
+|.||.||+||||+.|+.||..
T Consensus 852 cdwws~gvil~em~~g~~pf~~ 873 (1034)
T KOG0608|consen 852 CDWWSVGVILYEMLVGQPPFLA 873 (1034)
T ss_pred chhhHhhHHHHHHhhCCCCccC
Confidence 9999999999999999999864
No 398
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=4.7e-25 Score=209.64 Aligned_cols=171 Identities=19% Similarity=0.220 Sum_probs=128.2
Q ss_pred CCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceee
Q 042486 421 GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500 (635)
Q Consensus 421 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 500 (635)
|+|.+++...+ ..+++.+++.|+.|++.||.|||+.+ ||+||+++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc-----
Confidence 68999996543 34999999999999999999999843 999999999999999 99987654321
Q ss_pred ecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCC
Q 042486 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQ 580 (635)
Q Consensus 501 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~ 580 (635)
..||+.|||||++.+..++.++|||||||++|||++|+.|+.........+........... +. .
T Consensus 64 ---~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~-~ 128 (176)
T smart00750 64 ---SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD-----------PR-D 128 (176)
T ss_pred ---CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC-----------cc-c
Confidence 25889999999999999999999999999999999999997543222111211111111000 00 0
Q ss_pred CCCChHHHH--HHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 581 GNYPPVTAI--LVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 581 ~~~~~~~~~--~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
...+..... .+.+++.+||..||++||++.|+++++.....++
T Consensus 129 ~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~ 173 (176)
T smart00750 129 RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAET 173 (176)
T ss_pred cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence 011122222 5899999999999999999999999998876554
No 399
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=5.6e-26 Score=216.14 Aligned_cols=246 Identities=24% Similarity=0.330 Sum_probs=178.5
Q ss_pred ceEEEeee--CCcEEEEEEecc---------ChHHHHHHHhhhccCCcccEEEEEecC-----CeeEEEeecccCCCcch
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG---------DASDQIKLLNKINHSSLIRLLGICFNG-----GNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~---------~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~lV~E~~~~gsL~~ 425 (635)
|.||...+ +|+.||+|++.. .+-+|+++|.-++|.|++..++...-. .+.|.+.|.|.. +|..
T Consensus 67 GVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQS-DLHK 145 (449)
T KOG0664|consen 67 GVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQS-DLHK 145 (449)
T ss_pred eEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHh-hhhh
Confidence 99999988 899999999854 355799999999999999999887633 346888998854 7777
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIV 505 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 505 (635)
.+-.. ..|+...+.-+..||++||+|||+.+ |.||||||.|.|++.|..+||+|||+++..+..+.. .....+
T Consensus 146 IIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~--hMTqEV 218 (449)
T KOG0664|consen 146 IIVSP--QALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL--NMTHEV 218 (449)
T ss_pred eeccC--CCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccchhhhh--hhHHHH
Confidence 77433 34888888889999999999999955 999999999999999999999999999976544322 223456
Q ss_pred cCCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCch-------hhhhhhcCC
Q 042486 506 GTKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE-------ESLRHLMDP 577 (635)
Q Consensus 506 gt~~y~aPE~~~~-~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~-------~~l~~~~d~ 577 (635)
-|..|+|||.+.+ ..|+...||||.||++.||+..+-.|...+.-. ..+.+..++.....+ .....++..
T Consensus 219 VTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Piq--QL~lItdLLGTPs~EaMr~ACEGAk~H~LR~ 296 (449)
T KOG0664|consen 219 VTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIE--QLQMIIDLLGTPSQEAMKYACEGAKNHVLRA 296 (449)
T ss_pred HHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHH--HHHHHHHHhCCCcHHHHHHHhhhhHHHhhcc
Confidence 7889999999986 568999999999999999998887665433221 112222222222111 111111111
Q ss_pred -----cCCC----CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 578 -----SMQG----NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 578 -----~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
.+.. ..+.....+-..+...++..||.+|.+..+.+.++-
T Consensus 297 ~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 297 GLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred CCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 1110 011223344567888999999999999998887653
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.91 E-value=6.8e-25 Score=227.80 Aligned_cols=173 Identities=27% Similarity=0.361 Sum_probs=150.2
Q ss_pred ceEEEeee--CCcEEEEEEeccC---------------hHHHHHHHhhhc---cCCcccEEEEEecCCeeEEEeecc-cC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD---------------ASDQIKLLNKIN---HSSLIRLLGICFNGGNWYLVYENA-VN 420 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~---------------~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lV~E~~-~~ 420 (635)
|.|+.+.. +...|+||.++++ +.-|++||..++ |+||++++++|++++.+||+||-- ++
T Consensus 575 GkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~g 654 (772)
T KOG1152|consen 575 GKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEG 654 (772)
T ss_pred ceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCC
Confidence 89999987 5678999987543 346999999997 999999999999999999999965 34
Q ss_pred CCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceee
Q 042486 421 GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFAL 500 (635)
Q Consensus 421 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 500 (635)
-+|.+++..+.. +++.+...|++|++.|+++||+.+ |||||||-+|+.++.+|-+||+|||.+......+.
T Consensus 655 IDLFd~IE~kp~--m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfgsaa~~ksgpf---- 725 (772)
T KOG1152|consen 655 IDLFDFIEFKPR--MDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPF---- 725 (772)
T ss_pred cchhhhhhccCc--cchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeeccchhhhcCCCc----
Confidence 589999976544 999999999999999999999955 99999999999999999999999999987665443
Q ss_pred ecccccCCCccCccccccCCC-CcccchhhHHHHHHHHHhCCCCC
Q 042486 501 TSHIVGTKGYMAPEYLENGLV-STKLDVYAFGVLMLEMLSGKEAP 544 (635)
Q Consensus 501 ~~~~~gt~~y~aPE~~~~~~~-s~ksDV~SlGvvl~elltG~~p~ 544 (635)
..++||..|.|||++.+..| ...-|||++|++||-++....|+
T Consensus 726 -d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 726 -DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred -ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence 23689999999999998766 56789999999999998877775
No 401
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=4.4e-25 Score=257.64 Aligned_cols=201 Identities=18% Similarity=0.204 Sum_probs=139.0
Q ss_pred HHhhhcc-CCcccEEEEEe-------cCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCC
Q 042486 389 LLNKINH-SSLIRLLGICF-------NGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNP 460 (635)
Q Consensus 389 ~l~~l~h-~nIv~l~~~~~-------~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~ 460 (635)
..+.++| .||++++++|. +.+.+++++||+ +++|.+++.... ..+++.+++.++.||+.||.|||+.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~g-- 100 (793)
T PLN00181 25 GSKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHSQG-- 100 (793)
T ss_pred ccchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHhCC--
Confidence 3455667 68888999872 234567888987 669999996533 34899999999999999999999854
Q ss_pred CeEeecccCCCEEECCCC-------------------cEEEeeecCcccccccCCc-------------eeeecccccCC
Q 042486 461 PHVHKDIKCSNVLLDTDF-------------------RAKIANFALARPAERQEGE-------------FALTSHIVGTK 508 (635)
Q Consensus 461 ~ivH~Dikp~NIll~~~~-------------------~~kl~Dfg~a~~~~~~~~~-------------~~~~~~~~gt~ 508 (635)
|+||||||+||||+..+ .+|++|||+++........ ........||+
T Consensus 101 -IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 179 (793)
T PLN00181 101 -IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS 179 (793)
T ss_pred -eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence 99999999999996544 4555555555432110000 00001135788
Q ss_pred CccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHH
Q 042486 509 GYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTA 588 (635)
Q Consensus 509 ~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~ 588 (635)
.|||||++.+..++.++|||||||+||||++|..|+.... ....... .....+.. ....
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~-------------~~~~~~~~-----~~~~ 238 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLR-------------HRVLPPQI-----LLNW 238 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHH-------------HhhcChhh-----hhcC
Confidence 9999999999899999999999999999999887643110 0000000 00111110 0112
Q ss_pred HHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 589 ILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 589 ~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
....+++.+||+.||.+||++.|++++
T Consensus 239 ~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 239 PKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 235678899999999999999999875
No 402
>PRK06347 autolysin; Reviewed
Probab=99.91 E-value=2.7e-24 Score=234.34 Aligned_cols=166 Identities=17% Similarity=0.186 Sum_probs=132.6
Q ss_pred eeeeecCCCCCCHHHHHHHhCCChHhHhhhcCCCCCcccCCCcEEEEeeccccCC----------------CCceeeeEE
Q 042486 59 FLIFRSKPPFNTVASISTLLASKPSQLSKINSVSETATFETNQMVIVPVNCSCSG----------------KHYQANTTY 122 (635)
Q Consensus 59 ~~~y~~~~~g~tl~~Ia~~~~~~~~~i~~~N~~~~~~~~~~gq~l~ip~~~~c~~----------------~~~~~~~~y 122 (635)
+..|+|++ ||||+.||++||+++++|+++|++. .+.+.+||.|.||..-.-.. ........|
T Consensus 405 ~~~ytVk~-GDTL~sIA~kygVSv~~L~~~N~l~-s~~L~~Gq~L~IP~~~~~~~~t~~~s~~~~~~k~~s~~~~~~~~Y 482 (592)
T PRK06347 405 AKVYTVVK-GDSLWRIANNNKVTIANLKSWNNLK-SDFIYPGQKLKVSAGSTSNTNTSKPSTNTNTSKPSTNTNTNAKVY 482 (592)
T ss_pred ceeEEecC-CCCHHHHHHHhCCCHHHHHHHhCCC-cceeccCcEEEEecCCcccccccccccccccccccccccccceee
Confidence 45799998 9999999999999999999999985 46799999999997421100 001123479
Q ss_pred EEecCCchhhhhhhhcCCCccHHHHHhhc-CCCCCCCCCcEEEEeeeccCCCCCC-----CCCCeeeEEEEEeecCChHH
Q 042486 123 FVQNGDTYFLIANNTFQGLSTCQALQDQH-GNVSNFGVGTRLLAPLRCACPTKNQ-----TDSGVHYLLSYLVKGGNTVY 196 (635)
Q Consensus 123 ~V~~gdtl~~Ia~~~~~~l~~~~~l~~~N-~~~~~l~~G~~l~ip~~~~c~~~~~-----~~~~~~~~~~y~v~~gdtl~ 196 (635)
+|++|||||.|| ++|+ +++++|++|| +..+.|++||+|.||....-..... .........+|+|++|||||
T Consensus 483 tVk~GDTL~sIA-kkyg--VSv~~L~~~N~l~s~~L~~GQ~L~Ip~~~~~s~~~t~~~s~~~~~~~~~~~Y~Vk~GDTL~ 559 (592)
T PRK06347 483 TVAKGDSLWRIA-NNNK--VTIANLKSWNNLKSDFIYPGQKLKVSAGSTTNNTNTAKPSTNKPSNSTVKTYTVKKGDSLW 559 (592)
T ss_pred eecCCCCHHHHH-HHHC--CCHHHHHHhcCCCcccccCCcEEEEecCcccccccccCCccCCccCccceeeecCCCCcHH
Confidence 999999999999 8898 9999999999 7778999999999997543211000 00011124589999999999
Q ss_pred hHHHHhCCChhHHHHhcCCCCCCCCcccceecccC
Q 042486 197 GISKRFGVDTDRTLEANGLSEGAPNIYPFTTLLVP 231 (635)
Q Consensus 197 ~Ia~~~~~~~~~l~~~N~~~~~~~~~~~~~~l~iP 231 (635)
+||++|||++++|++||+|.. + .|++||.|.|+
T Consensus 560 sIA~KygvSv~~L~~~N~L~~-~-~L~~GQ~L~I~ 592 (592)
T PRK06347 560 AISRQYKTTVDNIKAWNKLTS-N-MIHVGQKLTIK 592 (592)
T ss_pred HHHHHhCCCHHHHHHhcCCCc-c-cCCCCCEEecC
Confidence 999999999999999999974 4 59999999875
No 403
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.91 E-value=3.3e-25 Score=233.66 Aligned_cols=230 Identities=24% Similarity=0.372 Sum_probs=181.1
Q ss_pred ceEEEeee--CCcEEEEEEeccC-------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD-------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~-------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|.|||++. .++.+|+|.++-+ ..+|+-+++..+|+||+.++|.+...+..++.||||.+|+|++.-+-.+
T Consensus 29 gdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~Tg- 107 (829)
T KOG0576|consen 29 GDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTG- 107 (829)
T ss_pred cchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecc-
Confidence 88999988 7899999998643 4579999999999999999999999999999999999999999876544
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
++++.++...+++.++||+|||+.+ -+|||||-.||++++.+.+|+.|||.+-.+...- .....+.||+.|||
T Consensus 108 -plselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitati---~KrksfiGtpywma 180 (829)
T KOG0576|consen 108 -PLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITATI---AKRKSFIGTPYWMA 180 (829)
T ss_pred -cchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhhh---hhhhcccCCccccc
Confidence 3999999999999999999999955 8999999999999999999999999986554322 33456789999999
Q ss_pred cccc---ccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 513 PEYL---ENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 513 PE~~---~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
||+. ..+.|..++|||++|+...|+-.-++|...-.. +..... ..+ ...+|... ..+.....
T Consensus 181 pEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp--mr~l~L----mTk--------S~~qpp~l-kDk~kws~ 245 (829)
T KOG0576|consen 181 PEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP--MRALFL----MTK--------SGFQPPTL-KDKTKWSE 245 (829)
T ss_pred hhHHHHHhcccccccccccccccchhhhhhcCCcccccch--HHHHHH----hhc--------cCCCCCcc-cCCccchH
Confidence 9976 357789999999999999999887766421110 000000 000 01111111 11223455
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQ 614 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~ 614 (635)
.+-++++.|+-.+|++||+++.++.
T Consensus 246 ~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 246 FFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHHHHHhcCCCccCCChhhhee
Confidence 6889999999999999999998765
No 404
>PRK06347 autolysin; Reviewed
Probab=99.90 E-value=2.8e-23 Score=226.39 Aligned_cols=170 Identities=19% Similarity=0.186 Sum_probs=135.0
Q ss_pred eeeeeecCCCCCCHHHHHHHhCCChHhHhhhcCCCCCcccCCCcEEEEeeccccCC-----------------CCceeee
Q 042486 58 AFLIFRSKPPFNTVASISTLLASKPSQLSKINSVSETATFETNQMVIVPVNCSCSG-----------------KHYQANT 120 (635)
Q Consensus 58 ~~~~y~~~~~g~tl~~Ia~~~~~~~~~i~~~N~~~~~~~~~~gq~l~ip~~~~c~~-----------------~~~~~~~ 120 (635)
....|+|++ ||||+.||++||+++++|+++|++. .+.|.+||.|+||..-.-.. .......
T Consensus 329 ~~~~Y~V~s-GDTL~~IA~rygvSv~eL~~~N~l~-~d~L~~Gq~L~VP~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~ 406 (592)
T PRK06347 329 NAKIYTVVK-GDSLWRIANNHKVTVANLKAWNNLK-SDFIYPGQKLKVSAGSTTSDTNTSKPSTGTSTSKPSTGTSTNAK 406 (592)
T ss_pred CceEEEeCC-CCCHHHHHHHhCCCHHHHHHHhCCC-ccccccCcEEEEeccccccccccccccccccccccccccccCce
Confidence 567799998 9999999999999999999999985 56899999999997421100 0011235
Q ss_pred EEEEecCCchhhhhhhhcCCCccHHHHHhhc-CCCCCCCCCcEEEEeeeccC------CCCCC-----CCCCeeeEEEEE
Q 042486 121 TYFVQNGDTYFLIANNTFQGLSTCQALQDQH-GNVSNFGVGTRLLAPLRCAC------PTKNQ-----TDSGVHYLLSYL 188 (635)
Q Consensus 121 ~y~V~~gdtl~~Ia~~~~~~l~~~~~l~~~N-~~~~~l~~G~~l~ip~~~~c------~~~~~-----~~~~~~~~~~y~ 188 (635)
.|+|++||||+.|| ++|+ +++++|+++| +..+.|.+||+|.||..-.- +.... .........+|+
T Consensus 407 ~ytVk~GDTL~sIA-~kyg--VSv~~L~~~N~l~s~~L~~Gq~L~IP~~~~~~~~t~~~s~~~~~~k~~s~~~~~~~~Yt 483 (592)
T PRK06347 407 VYTVVKGDSLWRIA-NNNK--VTIANLKSWNNLKSDFIYPGQKLKVSAGSTSNTNTSKPSTNTNTSKPSTNTNTNAKVYT 483 (592)
T ss_pred eEEecCCCCHHHHH-HHhC--CCHHHHHHHhCCCcceeccCcEEEEecCCcccccccccccccccccccccccccceeee
Confidence 79999999999999 8899 9999999999 76778999999999964211 10000 000111235799
Q ss_pred eecCChHHhHHHHhCCChhHHHHhcCCCCCCCCcccceecccCCCC
Q 042486 189 VKGGNTVYGISKRFGVDTDRTLEANGLSEGAPNIYPFTTLLVPLEN 234 (635)
Q Consensus 189 v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~~~~~~~l~iP~~~ 234 (635)
|++|||||+||++||+++++|++||++.. + .|++||.|.||...
T Consensus 484 Vk~GDTL~sIAkkygVSv~~L~~~N~l~s-~-~L~~GQ~L~Ip~~~ 527 (592)
T PRK06347 484 VAKGDSLWRIANNNKVTIANLKSWNNLKS-D-FIYPGQKLKVSAGS 527 (592)
T ss_pred ecCCCCHHHHHHHHCCCHHHHHHhcCCCc-c-cccCCcEEEEecCc
Confidence 99999999999999999999999999974 3 59999999999754
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.90 E-value=5.5e-24 Score=215.10 Aligned_cols=256 Identities=22% Similarity=0.315 Sum_probs=185.0
Q ss_pred cCCCCCCccc----ceEEEeee-----CCcEEEEEEecc-----ChHHHHHHHhhh-ccCCcccEEEEEecCCeeEEEee
Q 042486 352 DDFNPSCWIK----GSVYRGKI-----GGDFVAIKKVYG-----DASDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYE 416 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~-----~~~~vavK~~~~-----~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E 416 (635)
+.|...++|| ++||++.+ .++.||+|.+.. .+.+|+++|..+ .+.||+++.+++..++...+|+|
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp 115 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLP 115 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEec
Confidence 3444455555 68999876 357899999864 467999999999 58999999999999999999999
Q ss_pred cccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC-CCcEEEeeecCcccccccC
Q 042486 417 NAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-DFRAKIANFALARPAERQE 495 (635)
Q Consensus 417 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~~~~~~~ 495 (635)
|++.....++... ++..++..+++.++.||.++|..| ||||||||+|++.+. .++-.|.|||+|...+...
T Consensus 116 ~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~ 187 (418)
T KOG1167|consen 116 YFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQ 187 (418)
T ss_pred ccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhHHHHHhhh
Confidence 9999988888855 678889999999999999999954 999999999999975 4778999999997211000
Q ss_pred --------------------------------Ccee---------eecccccCCCccCcccccc-CCCCcccchhhHHHH
Q 042486 496 --------------------------------GEFA---------LTSHIVGTKGYMAPEYLEN-GLVSTKLDVYAFGVL 533 (635)
Q Consensus 496 --------------------------------~~~~---------~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SlGvv 533 (635)
.... ......||++|+|||++.. ...+++.||||.|++
T Consensus 188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI 267 (418)
T KOG1167|consen 188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI 267 (418)
T ss_pred hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence 0000 0112469999999998864 667899999999999
Q ss_pred HHHHHhCCCCCCCCcchhhHHHHhhh---------------c--ccccCC---chhhhhhhcCC---cC---------CC
Q 042486 534 MLEMLSGKEAPALYSEENMLLVDVLN---------------P--VLHKED---GEESLRHLMDP---SM---------QG 581 (635)
Q Consensus 534 l~elltG~~p~~~~~~~~~~l~~~~~---------------~--~~~~~~---~~~~l~~~~d~---~~---------~~ 581 (635)
++-+++++.||....++-..+.+.+. . ++...+ ..+....+... .. ..
T Consensus 268 ~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~ 347 (418)
T KOG1167|consen 268 LLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTERE 347 (418)
T ss_pred eehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeec
Confidence 99999999999766554322222111 1 111000 01111111111 00 00
Q ss_pred CCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 582 NYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 582 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
......+..+.+++.+|++.||.+|.|++|.++|
T Consensus 348 ~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 348 IGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 1112234468999999999999999999999876
No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.90 E-value=4.4e-23 Score=203.06 Aligned_cols=179 Identities=33% Similarity=0.514 Sum_probs=153.0
Q ss_pred ceEEEeee--CCcEEEEEEecc--------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG--------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~--------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.||++.. +++.+|+|.+.. .+.+|++.+++++|+|++++++++......++++||+++++|.+++....
T Consensus 13 ~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~ 92 (225)
T smart00221 13 GKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKG 92 (225)
T ss_pred eEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcc
Confidence 79999998 368999998864 34568999999999999999999998899999999999999999996543
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCcc
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYM 511 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 511 (635)
.. +++..+..++.+++.++.+||+.+ ++|+||+|+||+++.++.++|+|||.+......... ......++..|+
T Consensus 93 ~~-~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~~ 166 (225)
T smart00221 93 GK-LSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA--LLKTVKGTPFYL 166 (225)
T ss_pred cC-CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc--cccceeccCCcC
Confidence 22 789999999999999999999854 999999999999999999999999998865443200 123346778899
Q ss_pred Ccccc-ccCCCCcccchhhHHHHHHHHHhCCCCCCC
Q 042486 512 APEYL-ENGLVSTKLDVYAFGVLMLEMLSGKEAPAL 546 (635)
Q Consensus 512 aPE~~-~~~~~s~ksDV~SlGvvl~elltG~~p~~~ 546 (635)
+||.+ ....++.++|+|+||++++||++|+.||..
T Consensus 167 ~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 167 APEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred CHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 99998 666778899999999999999999999854
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.89 E-value=2.4e-23 Score=198.42 Aligned_cols=232 Identities=19% Similarity=0.296 Sum_probs=165.1
Q ss_pred ceEEEeee--CCcEEEEEEeccChHHHHHHHhhh-------ccCCcccEEEE-EecCCeeEEEeecccCCCcchhhcccC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGDASDQIKLLNKI-------NHSSLIRLLGI-CFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~~~~E~~~l~~l-------~h~nIv~l~~~-~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
|.+-.++. ++..+++|.+.+......++.+.. .|.||+.-++. |...+.+++++||++.|+|.+-+...+
T Consensus 38 gkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G 117 (378)
T KOG1345|consen 38 GKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG 117 (378)
T ss_pred eeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc
Confidence 55555555 677899999876544434444433 48899987665 456678899999999999999886643
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEE-C-CCCcEEEeeecCcccccccCCceeeecccccCCC
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL-D-TDFRAKIANFALARPAERQEGEFALTSHIVGTKG 509 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll-~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 509 (635)
+.+....+++.|+++||.|||+ +++||||||.+|||| + +..++||||||..+..+..- ....-+..
T Consensus 118 ---igE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV------~~~~~~~~ 185 (378)
T KOG1345|consen 118 ---IGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV------KYLEYVNN 185 (378)
T ss_pred ---ccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCcee------hhhhhhcc
Confidence 7888899999999999999999 459999999999999 3 33589999999987554321 12234557
Q ss_pred ccCcccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCC
Q 042486 510 YMAPEYLEN-----GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYP 584 (635)
Q Consensus 510 y~aPE~~~~-----~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ 584 (635)
|.+||.... -...+.+|||.||+++|.++||+.||....-.+..+++|....-.. .+.+...+.
T Consensus 186 y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk-----------~~~~P~~F~ 254 (378)
T KOG1345|consen 186 YHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRK-----------NPALPKKFN 254 (378)
T ss_pred cCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhccc-----------CccCchhhc
Confidence 899997642 2357889999999999999999999975544455555554432111 111211111
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042486 585 PVTAILVIRLIESCLKKDPSGRPAMDKIAQSIS 617 (635)
Q Consensus 585 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 617 (635)
-.+..+..+.++-|.++|++|--..++.+...
T Consensus 255 -~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 255 -PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred -ccCHHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence 12344678888999999999955555555433
No 408
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.86 E-value=1e-22 Score=194.02 Aligned_cols=232 Identities=22% Similarity=0.389 Sum_probs=183.8
Q ss_pred ceEEEeeeCCcEEEEEEe---------ccChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCC
Q 042486 362 GSVYRGKIGGDFVAIKKV---------YGDASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGG 432 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~---------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~ 432 (635)
|..|+|++.|..+++|.+ .++|.+|.-.|+-+.||||+.++|.|....+..++..||+.|+|...|+...+
T Consensus 204 gelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~ 283 (448)
T KOG0195|consen 204 GELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTS 283 (448)
T ss_pred cccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCcc
Confidence 899999998887877765 34678888899999999999999999999999999999999999999988777
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccC
Q 042486 433 KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMA 512 (635)
Q Consensus 433 ~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 512 (635)
...+..+..+++.+++.|+.|||+.. +-|..--|.+..+++|++.+++|+- +-+++.-. .....-.+.||+
T Consensus 284 vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarism-ad~kfsfq-------e~gr~y~pawms 354 (448)
T KOG0195|consen 284 VVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISM-ADTKFSFQ-------EVGRAYSPAWMS 354 (448)
T ss_pred EEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheec-ccceeeee-------ccccccCcccCC
Confidence 77888899999999999999999975 4455557899999999998887752 11111111 111234678999
Q ss_pred ccccccCCC---CcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHH
Q 042486 513 PEYLENGLV---STKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAI 589 (635)
Q Consensus 513 PE~~~~~~~---s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~ 589 (635)
||.+....- -..+|+|||.+++|||.|...||...+.-+ --.++.-+.++...|+..+.
T Consensus 355 pealqrkped~n~raadmwsfaillwel~trevpfadlspme------------------cgmkialeglrv~ippgis~ 416 (448)
T KOG0195|consen 355 PEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME------------------CGMKIALEGLRVHIPPGISR 416 (448)
T ss_pred HHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh------------------hhhhhhhccccccCCCCccH
Confidence 999875432 357899999999999999999986332211 11112223445566777788
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 590 LVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 590 ~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
.+..|+.-|+..||.+||.++.|+-.|+++.
T Consensus 417 hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 417 HMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 8999999999999999999999999999875
No 409
>PRK10783 mltD membrane-bound lytic murein transglycosylase D; Provisional
Probab=99.84 E-value=1.4e-20 Score=201.74 Aligned_cols=165 Identities=20% Similarity=0.248 Sum_probs=126.7
Q ss_pred eeeecCCCCCCHHHHHHHhCCChHhHhhhcC-CCCCcccCCC-cEEEEeeccccC-------CC------------Ccee
Q 042486 60 LIFRSKPPFNTVASISTLLASKPSQLSKINS-VSETATFETN-QMVIVPVNCSCS-------GK------------HYQA 118 (635)
Q Consensus 60 ~~y~~~~~g~tl~~Ia~~~~~~~~~i~~~N~-~~~~~~~~~g-q~l~ip~~~~c~-------~~------------~~~~ 118 (635)
....+.. +.+|..||+++|+++++|.++|. +......+.| +.|+||....-. +. ....
T Consensus 264 ~~V~v~~-~i~L~~iA~~~gvs~~eL~~LNP~~kr~~t~p~g~~~llvP~~~~~~f~~~l~~~~~~~~~p~~~~~~~~~~ 342 (456)
T PRK10783 264 ARVDLGQ-QIELAQAAEMAGMSLTKLKTFNAGYKRSTTAPSGPHYIMVPKKHADQLRESLASGEIAAVQSTLVADNTPLN 342 (456)
T ss_pred EEEecCC-CcCHHHHHHHcCCCHHHHHHhCccccCCCcCCCCCeEEEecCchhhHHHHhhhhhhhhhcccccccccCcCC
Confidence 3344444 67999999999999999999995 4333233344 778888753210 00 0012
Q ss_pred eeEEEEecCCchhhhhhhhcCCCccHHHHHhhc-CCCCCCCCCcEEEEeeeccCCCCCCCCCCeeeEEEEEeecCChHHh
Q 042486 119 NTTYFVQNGDTYFLIANNTFQGLSTCQALQDQH-GNVSNFGVGTRLLAPLRCACPTKNQTDSGVHYLLSYLVKGGNTVYG 197 (635)
Q Consensus 119 ~~~y~V~~gdtl~~Ia~~~~~~l~~~~~l~~~N-~~~~~l~~G~~l~ip~~~~c~~~~~~~~~~~~~~~y~v~~gdtl~~ 197 (635)
..+|+|++|||++.|| +.|+ ++.++|.++| ...+.|.+||+|.||..+.|... ......++|+|++||||++
T Consensus 343 ~~~y~Vk~GDTL~sIA-~r~g--vs~~~L~~~N~l~~~~L~~Gq~L~Ip~~~~~~~~----~~~~~~~~Y~Vr~GDTL~s 415 (456)
T PRK10783 343 SRSYKVRSGDTLSGIA-SRLN--VSTKDLQQWNNLRGSKLKVGQTLTIGAGSSAQRL----ANNSDSITYRVRKGDSLSS 415 (456)
T ss_pred ceEEEECCCCcHHHHH-HHHC--cCHHHHHHHcCCCcccCCCCCEEEecCCcccccc----cccccceeEEeCCCCCHHH
Confidence 3579999999999999 7788 8999999999 66688999999999976665321 1123346899999999999
Q ss_pred HHHHhCCChhHHHHhcCCCCCCCCcccceecccCCCC
Q 042486 198 ISKRFGVDTDRTLEANGLSEGAPNIYPFTTLLVPLEN 234 (635)
Q Consensus 198 Ia~~~~~~~~~l~~~N~~~~~~~~~~~~~~l~iP~~~ 234 (635)
||++|||++++|++||++... .|+|||+|.|++..
T Consensus 416 IA~kygVtv~~L~~~N~l~~~--~L~pGq~L~l~v~~ 450 (456)
T PRK10783 416 IAKRHGVNIKDVMRWNSDTAK--NLQPGDKLTLFVKN 450 (456)
T ss_pred HHHHhCCCHHHHHHhcCCCCC--cCCCCCEEEEecCC
Confidence 999999999999999998643 69999999998754
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.81 E-value=5.5e-19 Score=184.64 Aligned_cols=243 Identities=18% Similarity=0.167 Sum_probs=179.8
Q ss_pred ceEEEeeeCC---cEEEEEEecc-------ChHHHHHHHhhhcc----CCcccEEEEE-ecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIGG---DFVAIKKVYG-------DASDQIKLLNKINH----SSLIRLLGIC-FNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~~---~~vavK~~~~-------~~~~E~~~l~~l~h----~nIv~l~~~~-~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||.+.... ..+|+|.... .+..|..++..+.+ +++.++++.. ..+...|+||+.+ |.+|.++
T Consensus 32 G~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl 110 (322)
T KOG1164|consen 32 GAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDL 110 (322)
T ss_pred ceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHH
Confidence 8999999833 4688886643 35679999999873 5899999998 4777889999976 8899998
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC-----CcEEEeeecCccccc--ccCCce-
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-----FRAKIANFALARPAE--RQEGEF- 498 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~-----~~~kl~Dfg~a~~~~--~~~~~~- 498 (635)
........++....+.|+.|++.+|++||+.| ++||||||+|+++... ..+.|.|||+++... ......
T Consensus 111 ~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~ 187 (322)
T KOG1164|consen 111 RKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNL 187 (322)
T ss_pred HHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCccc
Confidence 86555556999999999999999999999965 9999999999999754 469999999998322 221110
Q ss_pred --ee--ecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhh
Q 042486 499 --AL--TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL 574 (635)
Q Consensus 499 --~~--~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 574 (635)
.. .....||..|.+++.+.+...+.+.|+||++.++.|++.|..||......... ..+.+.
T Consensus 188 ~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~---------------~~~~~~ 252 (322)
T KOG1164|consen 188 RPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK---------------SKFEKD 252 (322)
T ss_pred ccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchH---------------HHHHHH
Confidence 11 12356999999999999999999999999999999999999998543321110 000000
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 575 MDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 575 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
.............+..+.++...+-..+..++|....+...|+......
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 253 PRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 0000000011222334666666666789999999999999998887653
No 411
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=2.6e-19 Score=187.18 Aligned_cols=152 Identities=22% Similarity=0.232 Sum_probs=114.4
Q ss_pred cCCCCCCccc----ceEEEeee---CCcEEEEEEecc------------ChHHHHHHHhhhccCCcccEEEEEecCCeeE
Q 042486 352 DDFNPSCWIK----GSVYRGKI---GGDFVAIKKVYG------------DASDQIKLLNKINHSSLIRLLGICFNGGNWY 412 (635)
Q Consensus 352 ~~f~~~~~ig----g~Vy~g~~---~~~~vavK~~~~------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 412 (635)
++|.....|| |+||+|.. +++.||||++.. .+.+|+++|++++|+|+++.+.. .+..|
T Consensus 18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~ 94 (365)
T PRK09188 18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDG 94 (365)
T ss_pred CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcE
Confidence 4455555565 89999986 567789998542 25689999999999999863332 24579
Q ss_pred EEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecc-cCCCEEECCCCcEEEeeecCcccc
Q 042486 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDI-KCSNVLLDTDFRAKIANFALARPA 491 (635)
Q Consensus 413 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Di-kp~NIll~~~~~~kl~Dfg~a~~~ 491 (635)
+||||++|++|... .. .. ...++.+++.+|.|||+.+ |+|||| ||+|||++.++.+||+|||+++..
T Consensus 95 LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 95 LVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred EEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 99999999999632 11 11 1467889999999999854 999999 999999999999999999999866
Q ss_pred cccCCceee-----ecccccCCCccCcccccc
Q 042486 492 ERQEGEFAL-----TSHIVGTKGYMAPEYLEN 518 (635)
Q Consensus 492 ~~~~~~~~~-----~~~~~gt~~y~aPE~~~~ 518 (635)
......... .....+++.|+|||.+..
T Consensus 163 ~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 163 RRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 543211111 134678889999999853
No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.80 E-value=1.7e-18 Score=169.94 Aligned_cols=250 Identities=17% Similarity=0.173 Sum_probs=185.8
Q ss_pred CCCCCCccc----ceEEEeee--CCcEEEEEEec-----cChHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccC
Q 042486 353 DFNPSCWIK----GSVYRGKI--GGDFVAIKKVY-----GDASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVN 420 (635)
Q Consensus 353 ~f~~~~~ig----g~Vy~g~~--~~~~vavK~~~-----~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~ 420 (635)
+|..+.+|| |.++.|+. ++.+||||.-. .++..|....+.|. .+.|...+-+...+.+-.||+|.+ |
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-G 107 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-G 107 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-C
Confidence 455556665 88999986 99999999653 24678999999884 688999888888888889999987 7
Q ss_pred CCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC-----CCcEEEeeecCcccccccC
Q 042486 421 GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-----DFRAKIANFALARPAERQE 495 (635)
Q Consensus 421 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~-----~~~~kl~Dfg~a~~~~~~~ 495 (635)
.||+|++.-.+++ ++.+.+..+|.|++.-++|+|+.. +|.|||||+|+||.. ...+.++|||+|+......
T Consensus 108 PSLEDLFD~CgR~-FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 108 PSLEDLFDLCGRR-FSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred cCHHHHHHHhcCc-ccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 8999988654433 899999999999999999999955 999999999999953 3468999999999765543
Q ss_pred Cc----eeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhh
Q 042486 496 GE----FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESL 571 (635)
Q Consensus 496 ~~----~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l 571 (635)
.. ........||.+||+-....+...+.+.|+-|||-++++.+-|..||..-..+ ...+..
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~---------------tnK~kY 248 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD---------------TNKEKY 248 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc---------------chHHHH
Confidence 22 11224467999999999999999999999999999999999999999753222 112222
Q ss_pred hhhcCCcCCCC---CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhh
Q 042486 572 RHLMDPSMQGN---YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 572 ~~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 622 (635)
.++-+..-... .-...+.++..-++-.-..+-.+-|..+-+...+.++++.
T Consensus 249 eKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 249 EKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred HHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 22222111000 0011233455666666677788888888777777776643
No 413
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=1.9e-19 Score=191.42 Aligned_cols=219 Identities=24% Similarity=0.394 Sum_probs=162.5
Q ss_pred HhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccC
Q 042486 390 LNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKC 469 (635)
Q Consensus 390 l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp 469 (635)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.|.+.... ..++|.....+.++++.||.|||.. +-..|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNS--PIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcC--cceeeeeecc
Confidence 467899999999999999999999999999999999997643 3499999999999999999999983 3339999999
Q ss_pred CCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccccC-------CCCcccchhhHHHHHHHHHhCCC
Q 042486 470 SNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENG-------LVSTKLDVYAFGVLMLEMLSGKE 542 (635)
Q Consensus 470 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~ksDV~SlGvvl~elltG~~ 542 (635)
+|+++|..+.+||+|||+........ .........-..-|.|||.+... ..+.+.||||||++++|+++.+.
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~-~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETA-EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccc-cccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 99999999999999999987664310 00111112234579999998753 14678999999999999999999
Q ss_pred CCCCCcchhh--HHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 543 APALYSEENM--LLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 543 p~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
||........ .+...+.. .. .....|.+... .+....+..++.+||..+|.+||+++++-..++.+.
T Consensus 157 ~~~~~~~~~~~~eii~~~~~-----~~----~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKK-----GG----SNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred ccccccccCChHHHHHHHHh-----cC----CCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 9875332221 11111111 00 00011111100 023335899999999999999999999999999887
Q ss_pred hhc
Q 042486 621 NAS 623 (635)
Q Consensus 621 ~~s 623 (635)
...
T Consensus 226 ~~~ 228 (484)
T KOG1023|consen 226 KGG 228 (484)
T ss_pred ccc
Confidence 643
No 414
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.78 E-value=1.1e-17 Score=172.80 Aligned_cols=241 Identities=27% Similarity=0.403 Sum_probs=179.9
Q ss_pred ceEEEeeeCCcEEEEEEecc----------ChHHHHHHHhhhccC-CcccEEEEEecCCeeEEEeecccCCCcchhhccc
Q 042486 362 GSVYRGKIGGDFVAIKKVYG----------DASDQIKLLNKINHS-SLIRLLGICFNGGNWYLVYENAVNGSLSVWINDK 430 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~----------~~~~E~~~l~~l~h~-nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~ 430 (635)
|.||++... ..+++|.+.. .+.+|+.++..+.|+ +++++.+.+......+++++++.++++.+++...
T Consensus 14 ~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 92 (384)
T COG0515 14 GEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKI 92 (384)
T ss_pred eEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhc
Confidence 789999887 7788888753 255788899999988 7999999997777789999999999999777543
Q ss_pred CC-CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC-cEEEeeecCcccccccCCce---eeecccc
Q 042486 431 GG-KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF-RAKIANFALARPAERQEGEF---ALTSHIV 505 (635)
Q Consensus 431 ~~-~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~~---~~~~~~~ 505 (635)
.. ..+.......+..+++.++.|+|+.+ ++|||+||+||+++..+ .++++|||.++......... .......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 169 (384)
T COG0515 93 GRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSV 169 (384)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccc
Confidence 31 24888999999999999999999955 99999999999999988 79999999998544332211 1235578
Q ss_pred cCCCccCcccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCcch--hhHHHHhhhcccccCCchhhhhhhcCCcCC
Q 042486 506 GTKGYMAPEYLEN---GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEE--NMLLVDVLNPVLHKEDGEESLRHLMDPSMQ 580 (635)
Q Consensus 506 gt~~y~aPE~~~~---~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~ 580 (635)
|+..|++||.+.. ...+...|+||+|++++++++|..|+...... .......+...... .......
T Consensus 170 ~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 240 (384)
T COG0515 170 GTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP---------SLASPLS 240 (384)
T ss_pred cccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc---------ccccccC
Confidence 9999999999987 57899999999999999999999986543321 11111111111100 0000000
Q ss_pred CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 581 GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 581 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
..........+.+++..|+..+|..|.++.+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 241 PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00001223457899999999999999999987776
No 415
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=4.7e-20 Score=205.07 Aligned_cols=213 Identities=20% Similarity=0.238 Sum_probs=159.8
Q ss_pred HHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEe
Q 042486 385 DQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVH 464 (635)
Q Consensus 385 ~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH 464 (635)
.|+-+-..++|+|++..+..+.+....+-+|||+++ +|...+.... .+...++..+++|++.|++|||+.+ +.|
T Consensus 370 sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~G---iah 443 (601)
T KOG0590|consen 370 SEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSMG---LAH 443 (601)
T ss_pred hheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhcC---cee
Confidence 344455667999998888877776666666999999 9999986542 3788889999999999999999966 999
Q ss_pred ecccCCCEEECCCCcEEEeeecCcccccccCC-ceeeecccccCCCccCccccccCCCCc-ccchhhHHHHHHHHHhCCC
Q 042486 465 KDIKCSNVLLDTDFRAKIANFALARPAERQEG-EFALTSHIVGTKGYMAPEYLENGLVST-KLDVYAFGVLMLEMLSGKE 542 (635)
Q Consensus 465 ~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~s~-ksDV~SlGvvl~elltG~~ 542 (635)
||+|++|++++.++.+||+|||.+........ ........+|+..|+|||.+....|.+ ..||||.|+++..|.+|+.
T Consensus 444 rdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~ 523 (601)
T KOG0590|consen 444 RDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRF 523 (601)
T ss_pred ccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCC
Confidence 99999999999999999999999876543321 123445678999999999999888866 5899999999999999999
Q ss_pred CCCCCcchhhHHHHhhh-cccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 543 APALYSEENMLLVDVLN-PVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 543 p~~~~~~~~~~l~~~~~-~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
||.....++....+... ........ ........+...+.++.+||+.||.+|.|+++|++.
T Consensus 524 ~Wk~a~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 524 PWKVAKKSDNSFKTNNYSDQRNIFEG------------PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred ccccccccccchhhhccccccccccC------------hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 98754443322100000 00000000 001123345567899999999999999999999864
No 416
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.75 E-value=7.8e-19 Score=195.00 Aligned_cols=230 Identities=22% Similarity=0.307 Sum_probs=162.9
Q ss_pred eEEEeeeCCcEEEEEEeccC--------hHH---HHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccC
Q 042486 363 SVYRGKIGGDFVAIKKVYGD--------ASD---QIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKG 431 (635)
Q Consensus 363 ~Vy~g~~~~~~vavK~~~~~--------~~~---E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~ 431 (635)
+|.+++.....|+||++.+. +.+ |++ ..-++|||.+++.-+-..+.-.|||-+|..+ +|.|.+..+
T Consensus 38 Kv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlSTR- 114 (1431)
T KOG1240|consen 38 KVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLSTR- 114 (1431)
T ss_pred hhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhccc-
Confidence 57788886666999987432 233 334 4445899999988776667777999999865 899998654
Q ss_pred CCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccC---Ccee-eecccccC
Q 042486 432 GKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQE---GEFA-LTSHIVGT 507 (635)
Q Consensus 432 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~---~~~~-~~~~~~gt 507 (635)
.+|...+.+.|+.|++.||..+|+.+ |+|||||.+||||+.-+-+.|+||..-+..--.+ .++. .......-
T Consensus 115 -PFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRR 190 (1431)
T KOG1240|consen 115 -PFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRR 190 (1431)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCce
Confidence 45888889999999999999999965 9999999999999999999999998776432211 1111 11112233
Q ss_pred CCccCcccccc-----------CCCCcccchhhHHHHHHHHHhC-CCCCCCCcchhhHHHHhhhcccccCCchhhhhhhc
Q 042486 508 KGYMAPEYLEN-----------GLVSTKLDVYAFGVLMLEMLSG-KEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLM 575 (635)
Q Consensus 508 ~~y~aPE~~~~-----------~~~s~ksDV~SlGvvl~elltG-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 575 (635)
..|+|||.+.. ...+++.||||+||++.||++- +++|... .+...-.. ...+.+..++++-
T Consensus 191 tCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~~--~~~~~e~~Le~Ie 263 (1431)
T KOG1240|consen 191 TCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRSG--NADDPEQLLEKIE 263 (1431)
T ss_pred eeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhcc--CccCHHHHHHhCc
Confidence 47999998743 1267899999999999999885 5555321 11111000 0112233334433
Q ss_pred CCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 576 DPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 576 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
|. .+++++..|++.||++|.++++.++.-+.
T Consensus 264 d~------------~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 264 DV------------SLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred Cc------------cHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 32 37899999999999999999999987443
No 417
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.73 E-value=9.6e-18 Score=168.05 Aligned_cols=186 Identities=22% Similarity=0.273 Sum_probs=128.3
Q ss_pred eeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEE--CCC--CcEEEeee
Q 042486 410 NWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL--DTD--FRAKIANF 485 (635)
Q Consensus 410 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll--~~~--~~~kl~Df 485 (635)
..|+||..++ .+|.+++..+. .+.....-|+.|+++|+.|||+++ |.|||+|++|||+ |+| ..+.|+||
T Consensus 317 tlylvMkrY~-~tLr~yl~~~~---~s~r~~~~~laQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDF 389 (598)
T KOG4158|consen 317 TLYLVMKRYR-QTLREYLWTRH---RSYRTGRVILAQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADF 389 (598)
T ss_pred eEEEehhcch-hhHHHHHhcCC---CchHHHHHHHHHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEccc
Confidence 4789999875 48999996543 566667778999999999999976 9999999999999 333 35789999
Q ss_pred cCcccccccCCceee---ecccccCCCccCccccccCC------CCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHH
Q 042486 486 ALARPAERQEGEFAL---TSHIVGTKGYMAPEYLENGL------VSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVD 556 (635)
Q Consensus 486 g~a~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~------~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~ 556 (635)
|++-..+...-.... .-...|.-.-||||+..... --.|+|.|+.|.+.||+++...||....+-....
T Consensus 390 GCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~-- 467 (598)
T KOG4158|consen 390 GCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT-- 467 (598)
T ss_pred ceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech--
Confidence 987533221100001 11235777889999875311 1348999999999999999999986422211110
Q ss_pred hhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 557 VLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 557 ~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
...++-.-|.+ |..++..+.+++...|+.||++|++..-....|.-.+
T Consensus 468 ------------r~Yqe~qLPal----p~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsL 515 (598)
T KOG4158|consen 468 ------------RTYQESQLPAL----PSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSL 515 (598)
T ss_pred ------------hhhhhhhCCCC----cccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHH
Confidence 01111112233 3334455889999999999999999887776665433
No 418
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.72 E-value=2.4e-17 Score=155.23 Aligned_cols=238 Identities=16% Similarity=0.149 Sum_probs=176.5
Q ss_pred ceEEEeee--CCcEEEEEEecc-----ChHHHHHHHhhhcc-CCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCC
Q 042486 362 GSVYRGKI--GGDFVAIKKVYG-----DASDQIKLLNKINH-SSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK 433 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~-----~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~ 433 (635)
|.+|.|.. +|..||||.-.. ....|..+...+++ ..|..+..+..+...-.+|||.+ |.+|++++.-...
T Consensus 29 GdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R- 106 (341)
T KOG1163|consen 29 GDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSR- 106 (341)
T ss_pred hheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhh-
Confidence 88999987 899999997654 45678888888875 46777777777888889999977 8899999854332
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEEC---CCCcEEEeeecCcccccccCCc----eeeeccccc
Q 042486 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD---TDFRAKIANFALARPAERQEGE----FALTSHIVG 506 (635)
Q Consensus 434 ~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~g 506 (635)
.++....+-++-|++.-++|+|..+ ++||||||+|+|.. ....+.|+|||+++........ ........|
T Consensus 107 ~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltG 183 (341)
T KOG1163|consen 107 RFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTG 183 (341)
T ss_pred hhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccce
Confidence 2889999999999999999999855 99999999999995 3467999999999866443222 112244679
Q ss_pred CCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhh-cC---CcCCCC
Q 042486 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHL-MD---PSMQGN 582 (635)
Q Consensus 507 t~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~-~d---~~~~~~ 582 (635)
|.+|.+-..+.+...+.+.|+-|+|.+|.++.-|..||.......... .-|.+.+. +. ..+..-
T Consensus 184 TaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q------------KyEkI~EkK~s~~ie~LC~G 251 (341)
T KOG1163|consen 184 TARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ------------KYEKISEKKMSTPIEVLCKG 251 (341)
T ss_pred eeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH------------HHHHHHHhhcCCCHHHHhCC
Confidence 999999988888888999999999999999999999997533221110 00111110 00 011122
Q ss_pred CChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042486 583 YPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISRFL 620 (635)
Q Consensus 583 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 620 (635)
+ +.++.-.+.-|-..--++-|...-+.+.++-++
T Consensus 252 ~----P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 252 F----PAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred C----cHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 2 344667788898888889998877766666554
No 419
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.70 E-value=5.6e-18 Score=180.05 Aligned_cols=208 Identities=22% Similarity=0.313 Sum_probs=170.0
Q ss_pred hHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCC
Q 042486 383 ASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPP 461 (635)
Q Consensus 383 ~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ 461 (635)
...|..++..++ ||.++++...+..+...+++++|..+|.|...+..... +.+.........++-+++++|+.+
T Consensus 43 t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~--f~~~~~~~~~aelaLald~lh~l~--- 117 (612)
T KOG0603|consen 43 TKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVM--FDELDVAFYLAELALALDHLHKLG--- 117 (612)
T ss_pred cccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCc--hHHHHHHHHHHHHHHHHhhcchhH---
Confidence 346788888886 99999999999999999999999999999888865443 666777778889999999999966
Q ss_pred eEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCC
Q 042486 462 HVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGK 541 (635)
Q Consensus 462 ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~ 541 (635)
++|||+|++||+++.+|.+++.|||+.+..-.... .+||..|||||++. ......|.||||++++||+||.
T Consensus 118 iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~ 188 (612)
T KOG0603|consen 118 IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGT 188 (612)
T ss_pred HHHhcccccceeecccCccccCCchhhhHhHhhhh-------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCC
Confidence 99999999999999999999999999886544321 27999999999998 4567899999999999999999
Q ss_pred CCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCH--HHHHHHHHHH
Q 042486 542 EAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAM--DKIAQSISRF 619 (635)
Q Consensus 542 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl~~L~~~ 619 (635)
.||.. +..+.++. .....|.+......+++..++..+|..|--. +.+.+..+.-
T Consensus 189 ~pf~~----------------------~~~~~Il~--~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~ 244 (612)
T KOG0603|consen 189 LPFGG----------------------DTMKRILK--AELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHE 244 (612)
T ss_pred CCCch----------------------HHHHHHhh--hccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccc
Confidence 98753 11111111 1124566777778999999999999999765 6777778878
Q ss_pred Hhhcccccc
Q 042486 620 LNASLAWEL 628 (635)
Q Consensus 620 ~~~s~~w~~ 628 (635)
.-.+.+|..
T Consensus 245 f~~~i~~~~ 253 (612)
T KOG0603|consen 245 FFQSIDWNE 253 (612)
T ss_pred hheeeeHhh
Confidence 888899984
No 420
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.70 E-value=6.9e-17 Score=155.20 Aligned_cols=123 Identities=18% Similarity=0.157 Sum_probs=96.8
Q ss_pred ceEEEeee-CCcEEEEEEeccCh---------------------------------HHHHHHHhhhccCCcccEEEEEec
Q 042486 362 GSVYRGKI-GGDFVAIKKVYGDA---------------------------------SDQIKLLNKINHSSLIRLLGICFN 407 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~~~---------------------------------~~E~~~l~~l~h~nIv~l~~~~~~ 407 (635)
|.||+|.. +|+.||||.++.+. ..|++.|.++.++++.....+..
T Consensus 11 ~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~~~~~- 89 (190)
T cd05147 11 ANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEPILL- 89 (190)
T ss_pred eEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCcEEEe-
Confidence 89999987 78999999985421 12889999998887754333322
Q ss_pred CCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhccc-ccCCCCCeEeecccCCCEEECCCCcEEEeeec
Q 042486 408 GGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYL-HSFTNPPHVHKDIKCSNVLLDTDFRAKIANFA 486 (635)
Q Consensus 408 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~L-H~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 486 (635)
...+|||||++++++....... ..+++.....++.|++.+|.++ |+.+ |+||||||+||+++ ++.++|+|||
T Consensus 90 -~~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~~~v~LiDFG 162 (190)
T cd05147 90 -KSHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-DGKLYIIDVS 162 (190)
T ss_pred -cCCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-CCcEEEEEcc
Confidence 2238999999988776553222 2488999999999999999999 6744 99999999999998 4789999999
Q ss_pred Cccccc
Q 042486 487 LARPAE 492 (635)
Q Consensus 487 ~a~~~~ 492 (635)
++....
T Consensus 163 ~a~~~~ 168 (190)
T cd05147 163 QSVEHD 168 (190)
T ss_pred ccccCC
Confidence 997543
No 421
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.68 E-value=1.3e-17 Score=174.20 Aligned_cols=175 Identities=25% Similarity=0.424 Sum_probs=129.4
Q ss_pred eeEEEeecccCCCcchhhc-ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCc
Q 042486 410 NWYLVYENAVNGSLSVWIN-DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALA 488 (635)
Q Consensus 410 ~~~lV~E~~~~gsL~~~l~-~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 488 (635)
..|+.|+++...+|.+|+. +......++.....++.|++.|++| . +.+|+|+||.||++..+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 4789999999999999995 3344557888999999999999999 2 3999999999999999999999999998
Q ss_pred ccccccCC---ceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCcchhhHHHHhhhccccc
Q 042486 489 RPAERQEG---EFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLS-GKEAPALYSEENMLLVDVLNPVLHK 564 (635)
Q Consensus 489 ~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 564 (635)
........ .........||..||+||.+.+..|+.|+||||||++|+||+. -..++. ....+
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----r~~t~---------- 469 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----RIATL---------- 469 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----HHHhh----------
Confidence 86654431 1122344689999999999999999999999999999999998 222211 00000
Q ss_pred CCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHH
Q 042486 565 EDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKI 612 (635)
Q Consensus 565 ~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 612 (635)
.+.-...++|....++|.+ ..|+.+++...|.+||++.+.
T Consensus 470 ---~d~r~g~ip~~~~~d~p~e-----~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 470 ---TDIRDGIIPPEFLQDYPEE-----YTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred ---hhhhcCCCChHHhhcCcHH-----HHHHHHhcCCCcccCchHHHH
Confidence 0111112222222334433 578999999999999954443
No 422
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.67 E-value=5.4e-17 Score=158.08 Aligned_cols=148 Identities=11% Similarity=0.087 Sum_probs=114.5
Q ss_pred ceEEEeeeCCcEEEEEEeccC----------------hHHHHHHHhhhccCCcccEEEEEecC--------CeeEEEeec
Q 042486 362 GSVYRGKIGGDFVAIKKVYGD----------------ASDQIKLLNKINHSSLIRLLGICFNG--------GNWYLVYEN 417 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~~----------------~~~E~~~l~~l~h~nIv~l~~~~~~~--------~~~~lV~E~ 417 (635)
|.||....+++.+|||.+++. +.+|++.+.+++|++|..+.+++... +..+|+|||
T Consensus 45 ~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEy 124 (232)
T PRK10359 45 TKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEY 124 (232)
T ss_pred eEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEE
Confidence 899987777888999998642 35788899999999999999886633 357999999
Q ss_pred ccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc
Q 042486 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE 497 (635)
Q Consensus 418 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 497 (635)
++|.+|.++.. ++. ....+++.+|..+|+.+ ++|||+||+||+++.++ ++|+|||...........
T Consensus 125 i~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~ 190 (232)
T PRK10359 125 IEGVELNDMPE------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK 190 (232)
T ss_pred ECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-EEEEECCCcccccchhhH
Confidence 99999988742 232 24568999999999855 99999999999999988 999999988654322110
Q ss_pred eeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHH
Q 042486 498 FALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEML 538 (635)
Q Consensus 498 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ell 538 (635)
..++....+..++|+|+||+.+..+.
T Consensus 191 ---------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 191 ---------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ---------------HHHHHHhHhcccccccceeEeehHHH
Confidence 01223334557899999999987654
No 423
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.67 E-value=3.8e-16 Score=150.42 Aligned_cols=122 Identities=19% Similarity=0.186 Sum_probs=98.0
Q ss_pred ceEEEeee-CCcEEEEEEeccC---------------------------------hHHHHHHHhhhccCCcccEEEEEec
Q 042486 362 GSVYRGKI-GGDFVAIKKVYGD---------------------------------ASDQIKLLNKINHSSLIRLLGICFN 407 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~~---------------------------------~~~E~~~l~~l~h~nIv~l~~~~~~ 407 (635)
|.||+|+. +|+.||||.++.. ...|.+.+.++.|+++.....+...
T Consensus 11 ~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~ 90 (190)
T cd05145 11 ANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEPILLK 90 (190)
T ss_pred cEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEec
Confidence 89999987 6999999987643 1357888999999987554444333
Q ss_pred CCeeEEEeecccCCCcchh-hcccCCCCCCHHHHHHHHHHHHhhhccccc-CCCCCeEeecccCCCEEECCCCcEEEeee
Q 042486 408 GGNWYLVYENAVNGSLSVW-INDKGGKFLDWAQRIQIALDVATGLNYLHS-FTNPPHVHKDIKCSNVLLDTDFRAKIANF 485 (635)
Q Consensus 408 ~~~~~lV~E~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Df 485 (635)
..+|||||++++++... +.. ..++......++.+++.++.+||+ .+ |+||||||+||+++ ++.++|+||
T Consensus 91 --~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~~~~~liDF 161 (190)
T cd05145 91 --KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-DGKPYIIDV 161 (190)
T ss_pred --CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-CCCEEEEEc
Confidence 24899999998865443 332 237888999999999999999998 55 99999999999998 889999999
Q ss_pred cCccccc
Q 042486 486 ALARPAE 492 (635)
Q Consensus 486 g~a~~~~ 492 (635)
|++....
T Consensus 162 G~a~~~~ 168 (190)
T cd05145 162 SQAVELD 168 (190)
T ss_pred ccceecC
Confidence 9997554
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.65 E-value=3.6e-16 Score=177.52 Aligned_cols=231 Identities=18% Similarity=0.179 Sum_probs=168.6
Q ss_pred ceEEEeee-CCcEEEEEEeccChH----HHHHHHhhhc---cCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYGDAS----DQIKLLNKIN---HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGK 433 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~~~~----~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~ 433 (635)
|+||+|.. +|+.||+|.-+.-.. =-.+++.||+ -+.|..+...+.-.+..+||+||.+-|+|.+++. ..+
T Consensus 712 ~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N--~~~ 789 (974)
T KOG1166|consen 712 GSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLIN--TNK 789 (974)
T ss_pred eEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhc--cCC
Confidence 89999987 789999999877433 3345555555 2345555555556677899999999999999997 345
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEEC-------CCCcEEEeeecCcccccccCCceeeeccccc
Q 042486 434 FLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLD-------TDFRAKIANFALARPAERQEGEFALTSHIVG 506 (635)
Q Consensus 434 ~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g 506 (635)
.++|...+.++.|++..+++||.++ |||+||||+|+||. ++.-++|+|||.+..+...... .......+
T Consensus 790 ~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~-~~F~~~~~ 865 (974)
T KOG1166|consen 790 VMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDG-TKFKAVWH 865 (974)
T ss_pred CCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCC-cEEeeeec
Confidence 5999999999999999999999966 99999999999993 2356999999999876654433 23345678
Q ss_pred CCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChH
Q 042486 507 TKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPV 586 (635)
Q Consensus 507 t~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~ 586 (635)
|-.+-.+|.+.+..++...|.|.|..+++-|+.|+..- ..+.... .....+++..+
T Consensus 866 td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q------------~~~g~~~--~~~~~~~Ry~~---------- 921 (974)
T KOG1166|consen 866 TDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME------------VKNGSSW--MVKTNFPRYWK---------- 921 (974)
T ss_pred cccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH------------hcCCcce--eccccchhhhh----------
Confidence 89999999999999999999999999999999998320 0000000 00000111111
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhhc
Q 042486 587 TAILVIRLIESCLKKDPSGRPAMDKIAQSISRFLNAS 623 (635)
Q Consensus 587 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~s 623 (635)
.....++...+|..|-..=|...++...|+.++...
T Consensus 922 -~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~ 957 (974)
T KOG1166|consen 922 -RDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEH 957 (974)
T ss_pred -HHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHH
Confidence 111345666777755555688888888888887543
No 425
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.64 E-value=6.4e-16 Score=147.41 Aligned_cols=168 Identities=15% Similarity=0.089 Sum_probs=125.3
Q ss_pred ceEEEeeeCCcEEEEEEeccC-----------hHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcchhhcc
Q 042486 362 GSVYRGKIGGDFVAIKKVYGD-----------ASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND 429 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~~-----------~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 429 (635)
|+||.....+..++.+.+... +.+|+++|+++. |+++++++++ +..+++|||+.|.+|.+.+..
T Consensus 16 ~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~ 91 (218)
T PRK12274 16 GRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR 91 (218)
T ss_pred ceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh
Confidence 889977778888887776532 568999999995 5789999886 346999999999888654321
Q ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecc-cCCCEEECCCCcEEEeeecCcccccccCCce---e------
Q 042486 430 KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDI-KCSNVLLDTDFRAKIANFALARPAERQEGEF---A------ 499 (635)
Q Consensus 430 ~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Di-kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~---~------ 499 (635)
....++.+++.+|.++|+.+ |+|||| ||+|||++.++.++|+|||++.......... .
T Consensus 92 ---------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~ 159 (218)
T PRK12274 92 ---------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRH 159 (218)
T ss_pred ---------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHH
Confidence 11357789999999999955 999999 7999999999999999999998544322100 0
Q ss_pred -eecccccCCCccCccccccC-CCC-cccchhhHHHHHHHHHhCCCCCC
Q 042486 500 -LTSHIVGTKGYMAPEYLENG-LVS-TKLDVYAFGVLMLEMLSGKEAPA 545 (635)
Q Consensus 500 -~~~~~~gt~~y~aPE~~~~~-~~s-~ksDV~SlGvvl~elltG~~p~~ 545 (635)
.......++.|++|+...-- ..+ ...+.++-|.-+|.++|++.+..
T Consensus 160 llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 160 LLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 01112357778888754321 223 56788999999999999997753
No 426
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.64 E-value=4e-16 Score=156.53 Aligned_cols=162 Identities=22% Similarity=0.261 Sum_probs=108.0
Q ss_pred eEEEeecccCCCcchhhc---cc--CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeee
Q 042486 411 WYLVYENAVNGSLSVWIN---DK--GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485 (635)
Q Consensus 411 ~~lV~E~~~~gsL~~~l~---~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 485 (635)
.+++|+-+ .++|.+.+. .. ....+....++.+..|+++.+++||+.+ ++|+||+|+|++++.+|.++|+||
T Consensus 114 ~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgdi~~~nfll~~~G~v~Lg~F 189 (288)
T PF14531_consen 114 RFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGDIKPENFLLDQDGGVFLGDF 189 (288)
T ss_dssp EEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEE-TTS-EEE--G
T ss_pred hhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEecccceeeEEEcCCCCEEEcCh
Confidence 36788876 558877753 11 1223556677888899999999999966 999999999999999999999999
Q ss_pred cCcccccccCCceeeecccccCCCccCcccccc--------CCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHh
Q 042486 486 ALARPAERQEGEFALTSHIVGTKGYMAPEYLEN--------GLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDV 557 (635)
Q Consensus 486 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~ 557 (635)
+.....+... .. ...+..|.+||.... -.++.+.|.|+||+++|.|++++.|+.....+.....
T Consensus 190 ~~~~r~g~~~-----~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-- 261 (288)
T PF14531_consen 190 SSLVRAGTRY-----RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-- 261 (288)
T ss_dssp GGEEETTEEE-----EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG--
T ss_pred HHHeecCcee-----ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc--
Confidence 8876443321 11 344577999997643 2478899999999999999999999875433211000
Q ss_pred hhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCC
Q 042486 558 LNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGR 606 (635)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 606 (635)
.-..+. ..++.+..||..+|+.||.+|
T Consensus 262 ---------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 262 ---------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp ---------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ---------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 112344 677789999999999999988
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.57 E-value=7e-15 Score=143.99 Aligned_cols=119 Identities=18% Similarity=0.259 Sum_probs=103.1
Q ss_pred ceEEEeeeCCcEEEEEEecc---------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIGGDFVAIKKVYG---------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~---------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|...+..|++|+... .+.+|++++.+++|+++.....++.+.+..+++|||++|++|.++
T Consensus 10 ~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~ 89 (211)
T PRK14879 10 AEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDL 89 (211)
T ss_pred EEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHH
Confidence 89999999999999997542 244688999999999998877777777888999999999999999
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 490 (635)
+... .+ .+..++.+++.+|.+||+.+ ++|+|++|+||+++ ++.++|+|||.+..
T Consensus 90 ~~~~-----~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 90 INSN-----GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred HHhc-----cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 8542 22 78889999999999999855 99999999999999 78999999999864
No 428
>PRK10345 hypothetical protein; Provisional
Probab=99.56 E-value=1.5e-14 Score=140.44 Aligned_cols=118 Identities=14% Similarity=0.168 Sum_probs=91.2
Q ss_pred ceEEEeeeCCcEEEEEEecc-------ChHHHHHHHhhh-----ccCCcccEEEEEecCC---e-eEEEeec--ccCCCc
Q 042486 362 GSVYRGKIGGDFVAIKKVYG-------DASDQIKLLNKI-----NHSSLIRLLGICFNGG---N-WYLVYEN--AVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~-------~~~~E~~~l~~l-----~h~nIv~l~~~~~~~~---~-~~lV~E~--~~~gsL 423 (635)
|.||....++.. +||++.. ++.+|+.+++++ +||||++++|++.++. . +.+|+|| +.+|+|
T Consensus 16 ~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL 94 (210)
T PRK10345 16 RKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITL 94 (210)
T ss_pred eEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhH
Confidence 789974445444 6898753 367899999999 5799999999998763 4 3478999 557999
Q ss_pred chhhcccCCCCCCHHHHHHHHHHHHhhh-cccccCCCCCeEeecccCCCEEECC----CCcEEEeeecCc
Q 042486 424 SVWINDKGGKFLDWAQRIQIALDVATGL-NYLHSFTNPPHVHKDIKCSNVLLDT----DFRAKIANFALA 488 (635)
Q Consensus 424 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL-~~LH~~~~~~ivH~Dikp~NIll~~----~~~~kl~Dfg~a 488 (635)
.+++.+.. +++. ..++.+++.++ +|||+.+ |+||||||+|||++. +..++|+||+.+
T Consensus 95 ~~~l~~~~---~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 95 TEFAEQCR---YEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHHHccc---ccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99996532 5555 35677888787 9999955 999999999999963 348999995443
No 429
>PRK10783 mltD membrane-bound lytic murein transglycosylase D; Provisional
Probab=99.54 E-value=1.8e-14 Score=154.85 Aligned_cols=105 Identities=16% Similarity=0.242 Sum_probs=91.2
Q ss_pred eeeeecCCCCCCHHHHHHHhCCChHhHhhhcCCCCCcccCCCcEEEEeeccccCC-CCceeeeEEEEecCCchhhhhhhh
Q 042486 59 FLIFRSKPPFNTVASISTLLASKPSQLSKINSVSETATFETNQMVIVPVNCSCSG-KHYQANTTYFVQNGDTYFLIANNT 137 (635)
Q Consensus 59 ~~~y~~~~~g~tl~~Ia~~~~~~~~~i~~~N~~~~~~~~~~gq~l~ip~~~~c~~-~~~~~~~~y~V~~gdtl~~Ia~~~ 137 (635)
...|+|++ ||||++||++||+++++|+++|++.. +.+.+||.|.||.++.|.. ........|+|++||||++|| ++
T Consensus 343 ~~~y~Vk~-GDTL~sIA~r~gvs~~~L~~~N~l~~-~~L~~Gq~L~Ip~~~~~~~~~~~~~~~~Y~Vr~GDTL~sIA-~k 419 (456)
T PRK10783 343 SRSYKVRS-GDTLSGIASRLNVSTKDLQQWNNLRG-SKLKVGQTLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIA-KR 419 (456)
T ss_pred ceEEEECC-CCcHHHHHHHHCcCHHHHHHHcCCCc-ccCCCCCEEEecCCcccccccccccceeEEeCCCCCHHHHH-HH
Confidence 45799999 99999999999999999999999865 7899999999998877642 122334689999999999999 89
Q ss_pred cCCCccHHHHHhhc-CCCCCCCCCcEEEEeee
Q 042486 138 FQGLSTCQALQDQH-GNVSNFGVGTRLLAPLR 168 (635)
Q Consensus 138 ~~~l~~~~~l~~~N-~~~~~l~~G~~l~ip~~ 168 (635)
|+ +++++|+++| ...+.|++||+|.|++.
T Consensus 420 yg--Vtv~~L~~~N~l~~~~L~pGq~L~l~v~ 449 (456)
T PRK10783 420 HG--VNIKDVMRWNSDTAKNLQPGDKLTLFVK 449 (456)
T ss_pred hC--CCHHHHHHhcCCCCCcCCCCCEEEEecC
Confidence 99 9999999999 54449999999999864
No 430
>smart00090 RIO RIO-like kinase.
Probab=99.53 E-value=4.1e-14 Score=140.65 Aligned_cols=120 Identities=17% Similarity=0.127 Sum_probs=94.7
Q ss_pred ceEEEee---eCCcEEEEEEeccC-------------------------------hHHHHHHHhhhccCC--cccEEEEE
Q 042486 362 GSVYRGK---IGGDFVAIKKVYGD-------------------------------ASDQIKLLNKINHSS--LIRLLGIC 405 (635)
Q Consensus 362 g~Vy~g~---~~~~~vavK~~~~~-------------------------------~~~E~~~l~~l~h~n--Iv~l~~~~ 405 (635)
|.||+|. .+|+.||||.++.. +..|++.++++.+.. +.+++++
T Consensus 42 g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~~~- 120 (237)
T smart00090 42 ANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPIAW- 120 (237)
T ss_pred eeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeEe-
Confidence 8999998 27899999987532 246889999997633 3444443
Q ss_pred ecCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCC-eEeecccCCCEEECCCCcEEEee
Q 042486 406 FNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPP-HVHKDIKCSNVLLDTDFRAKIAN 484 (635)
Q Consensus 406 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~-ivH~Dikp~NIll~~~~~~kl~D 484 (635)
...++||||+++++|..+..... .+.......++.|++.+|.+||+ .+ ++||||||+||+++ ++.++|+|
T Consensus 121 ---~~~~lV~E~~~g~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~NIli~-~~~i~LiD 191 (237)
T smart00090 121 ---RRNVLVMEFIGGDGLPAPRLKDV--EPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEYNILVH-DGKVVIID 191 (237)
T ss_pred ---cCceEEEEEecCCcccccccccC--CcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChhhEEEE-CCCEEEEE
Confidence 23589999999988877653322 25666678899999999999998 56 99999999999999 88999999
Q ss_pred ecCcccc
Q 042486 485 FALARPA 491 (635)
Q Consensus 485 fg~a~~~ 491 (635)
||.+...
T Consensus 192 Fg~a~~~ 198 (237)
T smart00090 192 VSQSVEL 198 (237)
T ss_pred Chhhhcc
Confidence 9998744
No 431
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.53 E-value=2.7e-14 Score=138.50 Aligned_cols=116 Identities=19% Similarity=0.237 Sum_probs=97.1
Q ss_pred ceEEEeeeCCcEEEEEEecc---------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIGGDFVAIKKVYG---------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~---------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|.+++..|++|.... .+.+|++++.+++|+++.....++...+..++||||++|++|.++
T Consensus 8 ~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~ 87 (199)
T TIGR03724 8 AIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDV 87 (199)
T ss_pred EEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHH
Confidence 89999999999999998542 133689999999988766655566667778999999999999988
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 490 (635)
+.... . .++.+++.+|.+||+.+ ++|+|++|+||+++ ++.++++|||++..
T Consensus 88 ~~~~~---~------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 88 IEEGN---D------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred HhhcH---H------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 75421 1 78999999999999855 99999999999999 88999999998864
No 432
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.49 E-value=5.2e-14 Score=157.20 Aligned_cols=115 Identities=18% Similarity=0.193 Sum_probs=97.7
Q ss_pred ceEEEeeeCCcEEEEEEecc---------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIGGDFVAIKKVYG---------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~---------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
|.||+|.+.+..+++|+... .+.+|++++++++|++++....++.+....++||||+++++|.++
T Consensus 347 g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~ 426 (535)
T PRK09605 347 ADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDV 426 (535)
T ss_pred EEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHH
Confidence 89999999776666654311 245799999999999999888888777788999999999999988
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 490 (635)
+. ....++.+++.+|.+||+.+ ++||||||+||++ +++.++|+|||+++.
T Consensus 427 l~----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 427 LE----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred HH----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 74 34678999999999999855 9999999999999 678999999999874
No 433
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.49 E-value=1.8e-14 Score=141.72 Aligned_cols=207 Identities=22% Similarity=0.287 Sum_probs=143.1
Q ss_pred HHHHhhhccCCcccEEEEEecCC-----eeEEEeecccCCCcchhhccc--CCCCCCHHHHHHHHHHHHhhhcccccCCC
Q 042486 387 IKLLNKINHSSLIRLLGICFNGG-----NWYLVYENAVNGSLSVWINDK--GGKFLDWAQRIQIALDVATGLNYLHSFTN 459 (635)
Q Consensus 387 ~~~l~~l~h~nIv~l~~~~~~~~-----~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~ 459 (635)
++-|-++.|.|||+++.|+.+.. ...++.|||..|+|..+|++. ..+.+......+|+-||+.||.|||+..
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~- 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD- 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-
Confidence 44566778999999999987543 368999999999999999652 3355888899999999999999999976
Q ss_pred CCeEeecccCCCEEECCCCcEEEeeecCccccccc-CCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHH
Q 042486 460 PPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ-EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEML 538 (635)
Q Consensus 460 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~ell 538 (635)
++|+|+++..+-|++..++-+|+.--.-....... ......+....+-++|.+||+-.....+..+|||+||+..+||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 99999999999999999998887532111100000 00001112234678999999887777788999999999999998
Q ss_pred hCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 042486 539 SGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSI 616 (635)
Q Consensus 539 tG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 616 (635)
.+.--....... +. .++.+...+-.. .-+ .-++++..|++..|..||+|++++.|.
T Consensus 277 ilEiq~tnseS~----------~~----~ee~ia~~i~~l---en~-----lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 277 ILEIQSTNSESK----------VE----VEENIANVIIGL---ENG-----LQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HheeccCCCcce----------ee----hhhhhhhheeec---cCc-----cccCcCcccccCCCCCCcchhhhhcCc
Confidence 876332110000 00 011111111000 000 014678899999999999999988764
No 434
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.49 E-value=1.8e-13 Score=132.72 Aligned_cols=116 Identities=16% Similarity=0.105 Sum_probs=92.3
Q ss_pred ceEEEeee-CCcEEEEEEeccC-----------------------------hHHHHHHHhhhccC--CcccEEEEEecCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYGD-----------------------------ASDQIKLLNKINHS--SLIRLLGICFNGG 409 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~~-----------------------------~~~E~~~l~~l~h~--nIv~l~~~~~~~~ 409 (635)
|.||++.. +|+.||||.++.. ...|+.++.++.|+ .+.+.++ .+
T Consensus 29 g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~----~~ 104 (198)
T cd05144 29 SDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPID----WN 104 (198)
T ss_pred eEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceee----cC
Confidence 78999988 7899999975421 34678888889887 4445544 23
Q ss_pred eeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 410 NWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 410 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
..++||||+++++|.+.... .....++.+++.++.++|+.+ ++||||||+||++++++.++|+|||++.
T Consensus 105 ~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~~~~~~~liDfg~~~ 173 (198)
T cd05144 105 RHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNILVDDDEKIYIIDWPQMV 173 (198)
T ss_pred CceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEEcCCCcEEEEECCccc
Confidence 45899999999998776431 234568889999999999854 9999999999999999999999999986
Q ss_pred ccc
Q 042486 490 PAE 492 (635)
Q Consensus 490 ~~~ 492 (635)
...
T Consensus 174 ~~~ 176 (198)
T cd05144 174 STD 176 (198)
T ss_pred cCC
Confidence 544
No 435
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=99.47 E-value=6.5e-13 Score=139.86 Aligned_cols=170 Identities=16% Similarity=0.197 Sum_probs=99.6
Q ss_pred eeeecCCCCCCHHHHHHHhCCChHhHhhhcCCCCCcccCCCcEEEEeeccccCC---------------CCceeeeEEEE
Q 042486 60 LIFRSKPPFNTVASISTLLASKPSQLSKINSVSETATFETNQMVIVPVNCSCSG---------------KHYQANTTYFV 124 (635)
Q Consensus 60 ~~y~~~~~g~tl~~Ia~~~~~~~~~i~~~N~~~~~~~~~~gq~l~ip~~~~c~~---------------~~~~~~~~y~V 124 (635)
-.|.|++ |||||.||++||+++++|+++|++. .+.|.+||.|.||-...-.. .-.++...-.+
T Consensus 28 ~tytVq~-GDTLw~IA~~ygvtv~~I~~~N~l~-~~~I~~Gq~L~Ip~~~~~~~~~~~Vta~~LNVRsgps~s~~IIgsl 105 (481)
T PRK13914 28 STVVVEA-GDTLWGIAQSKGTTVDAIKKANNLT-TDKIVPGQKLQVNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSI 105 (481)
T ss_pred ceEEECC-CCCHHHHHHHHCCCHHHHHHHhCCC-cccccCCCEEEeCCCCcccccceeEecceEEEecCCCCCcceeeee
Confidence 3489998 9999999999999999999999984 56899999999996532100 01112223334
Q ss_pred ecCCchhhhhh---hh----cC-C---CccHHHHHhhcCCCCCCCCCcEEEE--------ee----------ecc-CCCC
Q 042486 125 QNGDTYFLIAN---NT----FQ-G---LSTCQALQDQHGNVSNFGVGTRLLA--------PL----------RCA-CPTK 174 (635)
Q Consensus 125 ~~gdtl~~Ia~---~~----~~-~---l~~~~~l~~~N~~~~~l~~G~~l~i--------p~----------~~~-c~~~ 174 (635)
.+|+.+..+.. .. |. | -+.-+-|...= ....+..-|++.= |. +.+ .|..
T Consensus 106 ~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (481)
T PRK13914 106 KGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTDKV-TSTPVAPTQEVKKETTTQQAAPAAETKTEVKQTTQATTPAP 184 (481)
T ss_pred cCCCEEEEeecccCCeEEEEcCCCCEEEEecccccCCC-ccCccccchhhhhccccccccchhcccchhccCCcccCCcc
Confidence 55555544320 00 10 0 00000000000 0000000011100 00 000 0000
Q ss_pred C-----CCCCCeeeEEEEEeecCChHHhHHHHhCCChhHHHHhcCCCCCCCCcccceecccCCCC
Q 042486 175 N-----QTDSGVHYLLSYLVKGGNTVYGISKRFGVDTDRTLEANGLSEGAPNIYPFTTLLVPLEN 234 (635)
Q Consensus 175 ~-----~~~~~~~~~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~~~~~~~l~iP~~~ 234 (635)
. ....-.....+|+|++|||||.||++||+++++|++||++... .|++||.|.||...
T Consensus 185 ~~~~~~~~~~~~~~a~tytVq~GDTL~sIAkrYgVtv~eI~~~N~l~s~--~L~pGQ~L~Ip~sa 247 (481)
T PRK13914 185 KVAETKETPVVDQNATTHAVKSGDTIWALSVKYGVSVQDIMSWNNLSSS--SIYVGQKLAIKQTA 247 (481)
T ss_pred cccccccCccccCCCeEEEECCCCCHHHHHHHHCCCHHHHHHhcCCCcc--ccCCCCEEEecCCC
Confidence 0 0000111235899999999999999999999999999999753 59999999999754
No 436
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.45 E-value=6.1e-13 Score=121.96 Aligned_cols=120 Identities=19% Similarity=0.159 Sum_probs=104.4
Q ss_pred ceEEEeeeCCcEEEEEEeccC-----hHHHHHHHhhhcc--CCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKIGGDFVAIKKVYGD-----ASDQIKLLNKINH--SSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~~-----~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
+.||+++.++..+++|..... +.+|+..+.+++| .++++++++....+..+++|||++++.+..+
T Consensus 12 ~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-------- 83 (155)
T cd05120 12 NRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV-------- 83 (155)
T ss_pred cceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC--------
Confidence 789999998889999988653 6789999999987 4899999988877889999999998877654
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARP 490 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 490 (635)
+......++.+++.+|.+||.....+++|+|++|+||++++.+.++++|||.+..
T Consensus 84 -~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 84 -SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred -CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 4566778899999999999986556799999999999999989999999998864
No 437
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.45 E-value=6.8e-14 Score=156.17 Aligned_cols=160 Identities=22% Similarity=0.309 Sum_probs=112.7
Q ss_pred HhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCC------------ceeeecccccCCCccCccc
Q 042486 448 ATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEG------------EFALTSHIVGTKGYMAPEY 515 (635)
Q Consensus 448 a~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~gt~~y~aPE~ 515 (635)
+.+++|||+.+ |+|||+||+|.+|+.-|.+|+.|||+.+....... ........+||+.|+|||+
T Consensus 153 vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV 229 (1205)
T KOG0606|consen 153 VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV 229 (1205)
T ss_pred hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence 78999999955 99999999999999999999999999874322110 0112244689999999999
Q ss_pred cccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHH
Q 042486 516 LENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLI 595 (635)
Q Consensus 516 ~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li 595 (635)
+....|....|.|++|+++||.+-|..||+....++. +-.++..... +.+ -......+.++++
T Consensus 230 ilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel-fg~visd~i~----------wpE------~dea~p~Ea~dli 292 (1205)
T KOG0606|consen 230 ILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL-FGQVISDDIE----------WPE------EDEALPPEAQDLI 292 (1205)
T ss_pred hhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH-Hhhhhhhhcc----------ccc------cCcCCCHHHHHHH
Confidence 9988899999999999999999999999875433321 1111111000 000 0112233478999
Q ss_pred HHhhhcCCCCCCCHHHHHHHHHHHHhhccccc
Q 042486 596 ESCLKKDPSGRPAMDKIAQSISRFLNASLAWE 627 (635)
Q Consensus 596 ~~cl~~dP~~RPs~~evl~~L~~~~~~s~~w~ 627 (635)
.++|+.+|..|--....++.-+.=+-..+||.
T Consensus 293 ~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 293 EQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred HHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 99999999999654444444444444557775
No 438
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.42 E-value=8.1e-13 Score=131.62 Aligned_cols=120 Identities=16% Similarity=0.160 Sum_probs=95.3
Q ss_pred ceEEEeeeCCcEEEEEEecc--------------------ChHHHHHHHhhhccCCc--ccEEEEEecCCe----eEEEe
Q 042486 362 GSVYRGKIGGDFVAIKKVYG--------------------DASDQIKLLNKINHSSL--IRLLGICFNGGN----WYLVY 415 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~--------------------~~~~E~~~l~~l~h~nI--v~l~~~~~~~~~----~~lV~ 415 (635)
|+||+...++..++||+... .+.+|++++.+++|++| ++.+++...+.. .++||
T Consensus 46 gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~ 125 (239)
T PRK01723 46 GTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILI 125 (239)
T ss_pred ccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEE
Confidence 79999999899999987732 13469999999998885 677776543322 25999
Q ss_pred ecccC-CCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccc
Q 042486 416 ENAVN-GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA 491 (635)
Q Consensus 416 E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 491 (635)
|++++ .+|.+++... .++.. .+.+++.+|.+||+.+ |+||||||.|||++.++.++|+|||.+...
T Consensus 126 e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 126 ERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred EecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 99997 6898888542 24543 3568899999999855 999999999999999899999999988743
No 439
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=8.4e-14 Score=155.30 Aligned_cols=212 Identities=23% Similarity=0.281 Sum_probs=158.5
Q ss_pred HHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccc-cCCCCCe
Q 042486 385 DQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLH-SFTNPPH 462 (635)
Q Consensus 385 ~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH-~~~~~~i 462 (635)
.|..+-+++. |+|++++++...+.+..+++.||..++++.+-+........+....-.++.|+..++.|+| . .++
T Consensus 69 ~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~ 145 (601)
T KOG0590|consen 69 TETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPE---NGV 145 (601)
T ss_pred ccccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcc---ccc
Confidence 3555555555 9999999999999999999999999999999883222213556667778999999999999 6 459
Q ss_pred EeecccCCCEEECCCC-cEEEeeecCcccccccCCceeeeccccc-CCCccCcccccc-CCCCcccchhhHHHHHHHHHh
Q 042486 463 VHKDIKCSNVLLDTDF-RAKIANFALARPAERQEGEFALTSHIVG-TKGYMAPEYLEN-GLVSTKLDVYAFGVLMLEMLS 539 (635)
Q Consensus 463 vH~Dikp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~-~~~s~ksDV~SlGvvl~ellt 539 (635)
.|+||||+|.+++..+ ..++.|||+|.......+........+| ++.|+|||...+ ....+..|+||.|+++.-+++
T Consensus 146 ~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~ 225 (601)
T KOG0590|consen 146 THRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLT 225 (601)
T ss_pred ccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccccccccc
Confidence 9999999999999999 9999999999877663333344455678 999999999887 456788999999999999999
Q ss_pred CCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 042486 540 GKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQ 614 (635)
Q Consensus 540 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 614 (635)
|..||............|.... . ...............+++.+++..+|..|.+.+++..
T Consensus 226 g~~p~~~~~~~~~~~~~~~~~~-------~--------~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 226 GELPWDFPSRKDGRYSSWKSNK-------G--------RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred CCCCccccccccccceeecccc-------c--------ccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 9999876544332222221110 0 0001111222334678888999999999999988754
No 440
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.29 E-value=1.2e-11 Score=118.56 Aligned_cols=119 Identities=18% Similarity=0.192 Sum_probs=86.5
Q ss_pred ceEEEeee-CCcEEEEEEeccCh-------------------------------HHHHHHHhhhccCC--cccEEEEEec
Q 042486 362 GSVYRGKI-GGDFVAIKKVYGDA-------------------------------SDQIKLLNKINHSS--LIRLLGICFN 407 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~~~-------------------------------~~E~~~l~~l~h~n--Iv~l~~~~~~ 407 (635)
|+||++.. +++.||||.++... ..|.+.+.++.+.. +.+.++.
T Consensus 11 g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~--- 87 (187)
T cd05119 11 ADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKPIDL--- 87 (187)
T ss_pred eeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCceEec---
Confidence 89999988 58999999876421 23455555554443 4444443
Q ss_pred CCeeEEEeecccCCCcchh-hcccCCCCCCHHHHHHHHHHHHhhhccccc-CCCCCeEeecccCCCEEECCCCcEEEeee
Q 042486 408 GGNWYLVYENAVNGSLSVW-INDKGGKFLDWAQRIQIALDVATGLNYLHS-FTNPPHVHKDIKCSNVLLDTDFRAKIANF 485 (635)
Q Consensus 408 ~~~~~lV~E~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Df 485 (635)
...++||||++++.+... +.... .. .....++.+++.++.++|. .+ ++|+||||+||+++ ++.++|+||
T Consensus 88 -~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~~~~~liDf 158 (187)
T cd05119 88 -NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-DGKVYIIDV 158 (187)
T ss_pred -CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-CCcEEEEEC
Confidence 245899999999654322 21111 11 5677899999999999998 54 99999999999999 899999999
Q ss_pred cCccccc
Q 042486 486 ALARPAE 492 (635)
Q Consensus 486 g~a~~~~ 492 (635)
|.+....
T Consensus 159 g~a~~~~ 165 (187)
T cd05119 159 PQAVEID 165 (187)
T ss_pred ccccccc
Confidence 9987543
No 441
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.25 E-value=4e-11 Score=129.82 Aligned_cols=77 Identities=19% Similarity=0.116 Sum_probs=59.6
Q ss_pred CeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHh-hhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecC
Q 042486 409 GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVAT-GLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFAL 487 (635)
Q Consensus 409 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~-aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 487 (635)
...+|||||++|++|.++....... . .+..++..++. .+..+|..+ ++|+|+||.||+++++++++++|||+
T Consensus 231 ~~~vLvmE~i~G~~L~~~~~~~~~~-~---~~~~ia~~~~~~~l~ql~~~g---~~H~D~hPgNilv~~~g~i~liDfG~ 303 (437)
T TIGR01982 231 SERVLTMEWIDGIPLSDIAALDEAG-L---DRKALAENLARSFLNQVLRDG---FFHADLHPGNIFVLKDGKIIALDFGI 303 (437)
T ss_pred CCceEEEEeECCcccccHHHHHhcC-C---CHHHHHHHHHHHHHHHHHhCC---ceeCCCCcccEEECCCCcEEEEeCCC
Confidence 4568999999999999887432111 2 23456666665 467788744 99999999999999999999999999
Q ss_pred ccccc
Q 042486 488 ARPAE 492 (635)
Q Consensus 488 a~~~~ 492 (635)
+....
T Consensus 304 ~~~l~ 308 (437)
T TIGR01982 304 VGRLS 308 (437)
T ss_pred eeECC
Confidence 87654
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.14 E-value=2.5e-10 Score=107.46 Aligned_cols=115 Identities=17% Similarity=0.105 Sum_probs=88.1
Q ss_pred ceEEEeeeCCcEEEEEEeccC------hHHHHHHHhhhccCCcc-cEEEEEecCCeeEEEeecccCCCcchhhcccCCCC
Q 042486 362 GSVYRGKIGGDFVAIKKVYGD------ASDQIKLLNKINHSSLI-RLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKF 434 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~~------~~~E~~~l~~l~h~nIv-~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~ 434 (635)
+.||+.+..+..+++|..... ...|..+++.+.+.+++ +++.+. ....++||||++|.++.+..
T Consensus 12 ~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~~~------- 82 (170)
T cd05151 12 NKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLTED------- 82 (170)
T ss_pred CceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccccc-------
Confidence 789999998999999987543 46899999999766554 455443 33458999999998886541
Q ss_pred CCHHHHHHHHHHHHhhhcccccCC--CCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 435 LDWAQRIQIALDVATGLNYLHSFT--NPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 435 l~~~~~~~i~~~ia~aL~~LH~~~--~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
.. ...++.+++++|..||+.+ ...++|+|++|.||+++ ++.++++|||.+.
T Consensus 83 ~~---~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 83 FS---DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cc---CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 11 1235678999999999865 23369999999999999 6789999999875
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=5e-11 Score=127.50 Aligned_cols=229 Identities=22% Similarity=0.256 Sum_probs=164.1
Q ss_pred ceEEEeee----CCcEEEEEEeccCh---------HHHHHHHhhh-ccCCcccEEEEEecCCeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKI----GGDFVAIKKVYGDA---------SDQIKLLNKI-NHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~----~~~~vavK~~~~~~---------~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l 427 (635)
|.||+++. ++..+|+|+-+.-+ .+|+...+++ .|+|.++.+..+...+..|+-.|++. .+|..+.
T Consensus 130 ~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~ 208 (524)
T KOG0601|consen 130 GSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQSYC 208 (524)
T ss_pred ceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeecccc-chhHHhh
Confidence 88998876 56789999854332 3566666666 49999999999999999999999884 6888877
Q ss_pred cccCCCCCCHHHHHHHHHHHHh----hhcccccCCCCCeEeecccCCCEEECCC-CcEEEeeecCcccccccCCc--eee
Q 042486 428 NDKGGKFLDWAQRIQIALDVAT----GLNYLHSFTNPPHVHKDIKCSNVLLDTD-FRAKIANFALARPAERQEGE--FAL 500 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~----aL~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~--~~~ 500 (635)
.... ..++....+.+..+... ||.++|. ..++|-|+||.||++..+ ...+++|||+...+...... ...
T Consensus 209 ~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~ 284 (524)
T KOG0601|consen 209 HTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKV 284 (524)
T ss_pred hccc-ccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcceeEEccCCccccceee
Confidence 5433 23666777777777777 9999998 459999999999999999 88999999999877655422 122
Q ss_pred ecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCC
Q 042486 501 TSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQ 580 (635)
Q Consensus 501 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~ 580 (635)
.....|...|++||..+ +.++...|+|++|.+..+..++...+...-. .....++... +.
T Consensus 285 ~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~----------------~~W~~~r~~~---ip 344 (524)
T KOG0601|consen 285 SKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN----------------SSWSQLRQGY---IP 344 (524)
T ss_pred eecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC----------------CCcccccccc---Cc
Confidence 23336778899999876 4578899999999999999998766432100 0011111111 11
Q ss_pred CCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042486 581 GNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQS 615 (635)
Q Consensus 581 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 615 (635)
.++-..-...+...+..|++.+|..|++.+.+..+
T Consensus 345 ~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 345 LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 11111122335568899999999999998877653
No 444
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.12 E-value=6.3e-10 Score=120.19 Aligned_cols=158 Identities=18% Similarity=0.289 Sum_probs=119.8
Q ss_pred CCcEEEEEEeccC-------hHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHH
Q 042486 370 GGDFVAIKKVYGD-------ASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQ 442 (635)
Q Consensus 370 ~~~~vavK~~~~~-------~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ 442 (635)
++.+|.|...+.. ..+-++.|+.++||||+++++.+..++..|+|+|.+. .|..++.+ +.......
T Consensus 36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-----l~~~~v~~ 108 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-----LGKEEVCL 108 (690)
T ss_pred cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-----hHHHHHHH
Confidence 6777777766432 3456788999999999999999999999999999873 57777755 33455666
Q ss_pred HHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCccccccCCCC
Q 042486 443 IALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVS 522 (635)
Q Consensus 443 i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 522 (635)
.+.||+.||.|||+ +.+++|++|.-+.|++++.|+.||++|.++........ ......--..|..|+.+....
T Consensus 109 Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~---~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 109 GLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA---PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc---ccccchhhhcccChhhcCccc--
Confidence 78999999999997 35699999999999999999999999998865443221 011112223466676544322
Q ss_pred cccchhhHHHHHHHHHhCC
Q 042486 523 TKLDVYAFGVLMLEMLSGK 541 (635)
Q Consensus 523 ~ksDV~SlGvvl~elltG~ 541 (635)
...|.|-||++++|++.|.
T Consensus 182 ~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cchhhhhHHHHHHHHhCcc
Confidence 3469999999999999994
No 445
>PF01476 LysM: LysM domain; InterPro: IPR018392 This domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation []. This domain may have a general peptidoglycan binding function.; GO: 0016998 cell wall macromolecule catabolic process; PDB: 2DJP_A 3ZQD_A 1Y7M_B 4A52_A 2L9Y_A 1E0G_A.
Probab=99.09 E-value=5.9e-11 Score=84.87 Aligned_cols=43 Identities=33% Similarity=0.690 Sum_probs=35.9
Q ss_pred EEeecCChHHhHHHHhCCChhHHHHhc-CCCCCCCCcccceecccC
Q 042486 187 YLVKGGNTVYGISKRFGVDTDRTLEAN-GLSEGAPNIYPFTTLLVP 231 (635)
Q Consensus 187 y~v~~gdtl~~Ia~~~~~~~~~l~~~N-~~~~~~~~~~~~~~l~iP 231 (635)
|+|++|||+|+||++||++.++|+++| ++.... |++||.|.||
T Consensus 1 y~V~~gDtl~~IA~~~~~~~~~l~~~N~~~~~~~--l~~G~~l~iP 44 (44)
T PF01476_consen 1 YTVQPGDTLWSIAKRYGISVDELMELNPNIDSDN--LQPGQKLCIP 44 (44)
T ss_dssp EEE-TT--HHHHHHHTTS-HHHHHHHCCTTHGGC--GGTTEEEEEC
T ss_pred CEECcCCcHHHHHhhhhhhHhHHHHhcCCCCccc--CCCCCEEEeC
Confidence 899999999999999999999999999 775444 9999999998
No 446
>COG1388 LytE FOG: LysM repeat [Cell envelope biogenesis, outer membrane]
Probab=99.06 E-value=2.3e-10 Score=101.97 Aligned_cols=111 Identities=23% Similarity=0.346 Sum_probs=90.6
Q ss_pred HHHHhCCChHhHhhhcCCCC-CcccCCCcEEEEeeccccCCCCceeeeEEEEecCCchhhhhhhhcCCCccHHHHHhhcC
Q 042486 74 ISTLLASKPSQLSKINSVSE-TATFETNQMVIVPVNCSCSGKHYQANTTYFVQNGDTYFLIANNTFQGLSTCQALQDQHG 152 (635)
Q Consensus 74 Ia~~~~~~~~~i~~~N~~~~-~~~~~~gq~l~ip~~~~c~~~~~~~~~~y~V~~gdtl~~Ia~~~~~~l~~~~~l~~~N~ 152 (635)
||..|+++++++.++|.+.. .+.+.+||.+.+|.. ..+.+..|++.+..+...+.. ..
T Consensus 1 ia~~~~~~v~~l~~~n~~~~~s~~i~~gq~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~~--~~-------- 59 (124)
T COG1388 1 IASKYGVSVKALKKANALTGKSDAIKPGQVLKIPGD-----------ISSTVNAGQTLSSLSNKVSDS--SS-------- 59 (124)
T ss_pred CcccccccHHHHHHHhcccCCCCccccCceEEccCC-----------cccccccccccccccceeecc--cc--------
Confidence 57899999999999998863 889999999999965 358889999999999433331 10
Q ss_pred CCCCCCCCcEEEEeeeccCCCCCCCCCCeeeEEEEEeecCChHHhHHHHhCCChhHHHHhcCCCCCCCCcccceecccCC
Q 042486 153 NVSNFGVGTRLLAPLRCACPTKNQTDSGVHYLLSYLVKGGNTVYGISKRFGVDTDRTLEANGLSEGAPNIYPFTTLLVPL 232 (635)
Q Consensus 153 ~~~~l~~G~~l~ip~~~~c~~~~~~~~~~~~~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~~~~~~~l~iP~ 232 (635)
.....+..+|+|+.||+|+.||++||+++.+|+++|++..+ .+++||.|.+|.
T Consensus 60 -------------------------~~~~~~~~~~~V~~gdtL~~Ia~~~~~tv~~l~~~n~l~~~--~i~~gq~l~~~~ 112 (124)
T COG1388 60 -------------------------ASKAPPVVTYTVKKGDTLSKIARKYGVTVAELKQLNNLSSD--KIKVGQKLKLPV 112 (124)
T ss_pred -------------------------ccccCCCceEEEecCCCHHHHHHHhCCCHHHHHHHhccCCC--ceecCcEEEEec
Confidence 00112234899999999999999999999999999999754 699999999986
No 447
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.01 E-value=4.7e-10 Score=123.00 Aligned_cols=75 Identities=17% Similarity=0.141 Sum_probs=52.6
Q ss_pred CeeEEEeecccCCCcchhh--cccCC--CCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC----cE
Q 042486 409 GNWYLVYENAVNGSLSVWI--NDKGG--KFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF----RA 480 (635)
Q Consensus 409 ~~~~lV~E~~~~gsL~~~l--~~~~~--~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~----~~ 480 (635)
...+|||||++|+.+.++- ...+. +.+.......++.|+. . .+++|+|+||.||+++.++ ++
T Consensus 234 t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~---~GffHaDpHPGNIlv~~~g~~~~~i 303 (537)
T PRK04750 234 SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------R---DGFFHADMHPGNIFVSYDPPENPRY 303 (537)
T ss_pred CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------h---CCeeeCCCChHHeEEecCCCCCCeE
Confidence 4567999999999998753 22110 1133333334444443 3 3499999999999999888 99
Q ss_pred EEeeecCcccccc
Q 042486 481 KIANFALARPAER 493 (635)
Q Consensus 481 kl~Dfg~a~~~~~ 493 (635)
+++|||++.....
T Consensus 304 ~llDFGivg~l~~ 316 (537)
T PRK04750 304 IALDFGIVGSLNK 316 (537)
T ss_pred EEEecceEEECCH
Confidence 9999999876644
No 448
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=6e-09 Score=96.31 Aligned_cols=117 Identities=18% Similarity=0.183 Sum_probs=89.4
Q ss_pred ceEEEeeeCCcEEEEEEecc---------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccCCCcchh
Q 042486 362 GSVYRGKIGGDFVAIKKVYG---------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVNGSLSVW 426 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~---------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~ 426 (635)
..+|.+.+-|..+++|.-.+ ...+|..++.+++--.|.--.=+..+.+...|+|||.+|..|.+.
T Consensus 10 a~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~ 89 (204)
T COG3642 10 AIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDA 89 (204)
T ss_pred eeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHH
Confidence 56788877776777775422 234689999998766665555555677788899999999999988
Q ss_pred hcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccc
Q 042486 427 INDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPA 491 (635)
Q Consensus 427 l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 491 (635)
+... ...++..+-.-+.-||..+ |+|+||.++||++..+. +.++|||++...
T Consensus 90 l~~~---------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 90 LEEA---------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred HHhc---------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 8654 2456667777777899855 99999999999997664 999999998744
No 449
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.89 E-value=1.3e-08 Score=97.38 Aligned_cols=97 Identities=13% Similarity=0.133 Sum_probs=72.4
Q ss_pred HHHHHHhhhcc--CCcccEEEEEecCCeeEEEeecccCCCcch-hhcccCCCCCCHHHHHHHHHHHHhhhccc-ccCCCC
Q 042486 385 DQIKLLNKINH--SSLIRLLGICFNGGNWYLVYENAVNGSLSV-WINDKGGKFLDWAQRIQIALDVATGLNYL-HSFTNP 460 (635)
Q Consensus 385 ~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~aL~~L-H~~~~~ 460 (635)
+|...|+++.. -++.+.+++ ...+|||||+.++.+.. .+.+. .++..+...+..+++.+|..| |+.+
T Consensus 75 kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H~~g-- 145 (197)
T cd05146 75 KEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYKECN-- 145 (197)
T ss_pred HHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 68889999864 356666654 45689999997654422 22221 245556677889999999999 7744
Q ss_pred CeEeecccCCCEEECCCCcEEEeeecCccccc
Q 042486 461 PHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492 (635)
Q Consensus 461 ~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 492 (635)
++|+||++.||+++ ++.+.|+|||.+....
T Consensus 146 -lVHGDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 146 -LVHADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred -eecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999999999997 4689999999886554
No 450
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.88 E-value=1.1e-08 Score=93.99 Aligned_cols=127 Identities=19% Similarity=0.201 Sum_probs=94.7
Q ss_pred ceEEEeeeCCcEEEEEEecc---------------ChHHHHHHHhhhccCCcccEEEEEecCCeeEEEeecccC-CCcch
Q 042486 362 GSVYRGKIGGDFVAIKKVYG---------------DASDQIKLLNKINHSSLIRLLGICFNGGNWYLVYENAVN-GSLSV 425 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~---------------~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~-gsL~~ 425 (635)
+.|+++.+.|+...||.-.. ...+|.+.|.++.--.|.--.=++.+...-.|+|||.++ .++.+
T Consensus 21 Arv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~ 100 (229)
T KOG3087|consen 21 ARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKD 100 (229)
T ss_pred eeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHH
Confidence 68999999999999985432 234799999998766665555556666667899999976 47788
Q ss_pred hhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCC---cEEEeeecCcccc
Q 042486 426 WINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDF---RAKIANFALARPA 491 (635)
Q Consensus 426 ~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~---~~kl~Dfg~a~~~ 491 (635)
++...-...........++.++-..+.-||..+ ++|+||..+||++..++ .+.++|||++...
T Consensus 101 ~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 101 FILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred HHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 875432222333334678888999999999855 99999999999995543 4589999998643
No 451
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.87 E-value=2.3e-08 Score=105.04 Aligned_cols=158 Identities=17% Similarity=0.257 Sum_probs=122.8
Q ss_pred ceEEEeee--CCcEEEEEEeccC-------hHHHHHHHhhhccCCcccEEEEEe----cCCeeEEEeecccC-CCcchhh
Q 042486 362 GSVYRGKI--GGDFVAIKKVYGD-------ASDQIKLLNKINHSSLIRLLGICF----NGGNWYLVYENAVN-GSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~--~~~~vavK~~~~~-------~~~E~~~l~~l~h~nIv~l~~~~~----~~~~~~lV~E~~~~-gsL~~~l 427 (635)
.+.||+.. +|..+++|++..+ ...-++.++++.|.|+|++..++. ++...++||+|+++ ++|.++-
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 67888875 8999999999432 235688999999999999999887 34568999999987 5676654
Q ss_pred ccc-------------CCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccccc
Q 042486 428 NDK-------------GGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQ 494 (635)
Q Consensus 428 ~~~-------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 494 (635)
... .+...++..+|.++.|+..||.++|+.| +.-+-|.+.+|+++.+.+++|+..|........
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 211 1234778999999999999999999966 888999999999999999999988876544332
Q ss_pred CCceeeecccccCCCccCccccccCCCCcccchhhHHHHHHHHHhCCC
Q 042486 495 EGEFALTSHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLMLEMLSGKE 542 (635)
Q Consensus 495 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~ 542 (635)
.. |-+.. ..+-|.=.||.+++.|.||..
T Consensus 447 ~~-----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 447 PT-----------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CC-----------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 20 11111 235789999999999999974
No 452
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.87 E-value=1.5e-08 Score=102.17 Aligned_cols=125 Identities=16% Similarity=0.176 Sum_probs=96.0
Q ss_pred ceEEEeeeCCcEEEEEEecc------------------ChHHHHHHHhhhccCCc--ccEEEEEec-----CCeeEEEee
Q 042486 362 GSVYRGKIGGDFVAIKKVYG------------------DASDQIKLLNKINHSSL--IRLLGICFN-----GGNWYLVYE 416 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~------------------~~~~E~~~l~~l~h~nI--v~l~~~~~~-----~~~~~lV~E 416 (635)
..|++..++|+.+.||+... .+.+|...+.++...+| .+.+++... ....+||+|
T Consensus 36 rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 36 RRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred ceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 46778888999999996632 15688898888865444 445556543 234689999
Q ss_pred cccCC-CcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC-------CCcEEEeeecCc
Q 042486 417 NAVNG-SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT-------DFRAKIANFALA 488 (635)
Q Consensus 417 ~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~-------~~~~kl~Dfg~a 488 (635)
++++. +|.+++........+...+..++.+++..+.-||..+ |+|+|++++|||++. +..+.|+||+.+
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~ 192 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA 192 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence 99886 8988885322223566777889999999999999955 999999999999975 578999999987
Q ss_pred c
Q 042486 489 R 489 (635)
Q Consensus 489 ~ 489 (635)
.
T Consensus 193 ~ 193 (268)
T PRK15123 193 Q 193 (268)
T ss_pred c
Confidence 5
No 453
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.83 E-value=1.9e-09 Score=115.58 Aligned_cols=238 Identities=21% Similarity=0.243 Sum_probs=161.6
Q ss_pred HHhhcCCCCCCccc----ceEEEeee---CCcEEEEEEeccCh---------HHHHHHHhhh-ccCCcccEEEEEecCCe
Q 042486 348 QAATDDFNPSCWIK----GSVYRGKI---GGDFVAIKKVYGDA---------SDQIKLLNKI-NHSSLIRLLGICFNGGN 410 (635)
Q Consensus 348 ~~at~~f~~~~~ig----g~Vy~g~~---~~~~vavK~~~~~~---------~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 410 (635)
..-+.+|.....|+ +.|++... ++..+++|.+.+.. ..|+.+...+ .|.++++....+....+
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 33445565555554 45555443 56678888765431 2455555555 58889998888887788
Q ss_pred eEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCC-CcEEEeeecCcc
Q 042486 411 WYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTD-FRAKIANFALAR 489 (635)
Q Consensus 411 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~a~ 489 (635)
.|+--||++++++...+.-. ..+++..++++..|++.++.++|+ +.++|+|+||+||++..+ +.-++.|||.+.
T Consensus 341 ~~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred ccCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhcccccccc
Confidence 88999999999887766221 237778889999999999999998 449999999999999776 888999999986
Q ss_pred cccccCCceeeecccccCCCc-cCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCch
Q 042486 490 PAERQEGEFALTSHIVGTKGY-MAPEYLENGLVSTKLDVYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGE 568 (635)
Q Consensus 490 ~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~s~ksDV~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 568 (635)
........ ....+..| .+++......+..+.|+||||.-+.|.+++........ .
T Consensus 416 ~~~~~~~~-----~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~----~--------------- 471 (524)
T KOG0601|consen 416 RLAFSSGV-----FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV----Q--------------- 471 (524)
T ss_pred ccceeccc-----ccccccccccchhhccccccccccccccccccccccccCcccCcccc----c---------------
Confidence 43221111 11222334 35666667788899999999999999999975321100 0
Q ss_pred hhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 042486 569 ESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIAQSISR 618 (635)
Q Consensus 569 ~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 618 (635)
...+.... ....+... ..+..+.+.+...++..||.+.++..+...
T Consensus 472 --~~~i~~~~-~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 472 --SLTIRSGD-TPNLPGLK-LQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred --ceeeeccc-ccCCCchH-HhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 00000000 01112222 557888899999999999999988776553
No 454
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.82 E-value=1.8e-09 Score=121.45 Aligned_cols=211 Identities=20% Similarity=0.250 Sum_probs=144.3
Q ss_pred cCCcccEEEEEecCCeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEE
Q 042486 395 HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLL 474 (635)
Q Consensus 395 h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll 474 (635)
||-+++...-+.-....+|+++|+.+++|...++.... .+..-.......+..++++||.. .+.|+|++|.|++.
T Consensus 863 ~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~--~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~ 937 (1205)
T KOG0606|consen 863 SPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGC--LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLI 937 (1205)
T ss_pred CCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCC--cccccccchhHHHHhhhhccccc---hhhcccccccchhh
Confidence 45555444444456778999999999999998876542 44444445566788899999984 38999999999999
Q ss_pred CCCCcEEEeeecCccccccc---------------------C-------CceeeecccccCCCccCccccccCCCCcccc
Q 042486 475 DTDFRAKIANFALARPAERQ---------------------E-------GEFALTSHIVGTKGYMAPEYLENGLVSTKLD 526 (635)
Q Consensus 475 ~~~~~~kl~Dfg~a~~~~~~---------------------~-------~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksD 526 (635)
..++..++.|||........ . ..........+|+.|.+||.+.+......+|
T Consensus 938 ~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad 1017 (1205)
T KOG0606|consen 938 AYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAAD 1017 (1205)
T ss_pred cccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcch
Confidence 99999999999843321100 0 0001122357899999999999999999999
Q ss_pred hhhHHHHHHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCC-CCChHHHHHHHHHHHHhhhcCCCC
Q 042486 527 VYAFGVLMLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQG-NYPPVTAILVIRLIESCLKKDPSG 605 (635)
Q Consensus 527 V~SlGvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~-~~~~~~~~~l~~li~~cl~~dP~~ 605 (635)
.|++|++++|.++|..||.....+ ..++.+....+.. .-+...+....+++...+..+|.+
T Consensus 1018 ~~~~g~~l~e~l~g~pp~na~tpq------------------~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~q 1079 (1205)
T KOG0606|consen 1018 WWSSGVCLFEVLTGIPPFNAETPQ------------------QIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQ 1079 (1205)
T ss_pred hhhhhhhhhhhhcCCCCCCCcchh------------------hhhhccccCCCCCCCCccccChhhhhhhhhhhccCchh
Confidence 999999999999999987542221 1112222211111 123334555788999999999999
Q ss_pred CCCHHHHHHHHHHHHhhcccccc
Q 042486 606 RPAMDKIAQSISRFLNASLAWEL 628 (635)
Q Consensus 606 RPs~~evl~~L~~~~~~s~~w~~ 628 (635)
|-.+.--.+.=..-+....+|+.
T Consensus 1080 r~~a~~~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1080 RLGAKGAAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred ccCcccccccccCCccCCCCccc
Confidence 98877433333334555566655
No 455
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.78 E-value=5.6e-08 Score=95.48 Aligned_cols=126 Identities=22% Similarity=0.303 Sum_probs=98.5
Q ss_pred ceEEEeeeCC-cEEEEEEecc--------ChHHHHHHHhhhccC--CcccEEEEEecC---CeeEEEeecccCCCcchhh
Q 042486 362 GSVYRGKIGG-DFVAIKKVYG--------DASDQIKLLNKINHS--SLIRLLGICFNG---GNWYLVYENAVNGSLSVWI 427 (635)
Q Consensus 362 g~Vy~g~~~~-~~vavK~~~~--------~~~~E~~~l~~l~h~--nIv~l~~~~~~~---~~~~lV~E~~~~gsL~~~l 427 (635)
+.+|+....+ ..+++|.... ++..|.++++.+++. ++.+++.+.... +..++||||++|.++.+.+
T Consensus 12 n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~ 91 (223)
T cd05154 12 NLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRL 91 (223)
T ss_pred ceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCC
Confidence 6899998854 8899997653 356899999999764 467788877654 2568999999999888766
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhhcccccCC-------------------------------------------------
Q 042486 428 NDKGGKFLDWAQRIQIALDVATGLNYLHSFT------------------------------------------------- 458 (635)
Q Consensus 428 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~------------------------------------------------- 458 (635)
.. ..++..++..++.+++++|..||+..
T Consensus 92 ~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (223)
T cd05154 92 LR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHL 168 (223)
T ss_pred CC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhC
Confidence 42 23677788888888888888888531
Q ss_pred ----CCCeEeecccCCCEEECC--CCcEEEeeecCccc
Q 042486 459 ----NPPHVHKDIKCSNVLLDT--DFRAKIANFALARP 490 (635)
Q Consensus 459 ----~~~ivH~Dikp~NIll~~--~~~~kl~Dfg~a~~ 490 (635)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 169 ~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 169 PADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred CCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999988 66789999998763
No 456
>PF01476 LysM: LysM domain; InterPro: IPR018392 This domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation []. This domain may have a general peptidoglycan binding function.; GO: 0016998 cell wall macromolecule catabolic process; PDB: 2DJP_A 3ZQD_A 1Y7M_B 4A52_A 2L9Y_A 1E0G_A.
Probab=98.77 E-value=5.6e-09 Score=74.57 Aligned_cols=43 Identities=19% Similarity=0.364 Sum_probs=35.8
Q ss_pred eecCCCCCCHHHHHHHhCCChHhHhhhc-CCCCCcccCCCcEEEEe
Q 042486 62 FRSKPPFNTVASISTLLASKPSQLSKIN-SVSETATFETNQMVIVP 106 (635)
Q Consensus 62 y~~~~~g~tl~~Ia~~~~~~~~~i~~~N-~~~~~~~~~~gq~l~ip 106 (635)
|+|++ |||+++||++||++.++|.++| ++.... |.+||.|.||
T Consensus 1 y~V~~-gDtl~~IA~~~~~~~~~l~~~N~~~~~~~-l~~G~~l~iP 44 (44)
T PF01476_consen 1 YTVQP-GDTLWSIAKRYGISVDELMELNPNIDSDN-LQPGQKLCIP 44 (44)
T ss_dssp EEE-T-T--HHHHHHHTTS-HHHHHHHCCTTHGGC-GGTTEEEEEC
T ss_pred CEECc-CCcHHHHHhhhhhhHhHHHHhcCCCCccc-CCCCCEEEeC
Confidence 78998 9999999999999999999999 775545 9999999998
No 457
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.74 E-value=3.4e-09 Score=115.04 Aligned_cols=153 Identities=22% Similarity=0.276 Sum_probs=104.6
Q ss_pred HHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCc------eeeecccccCCCccCccccc
Q 042486 444 ALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGE------FALTSHIVGTKGYMAPEYLE 517 (635)
Q Consensus 444 ~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~ 517 (635)
+.++++|+.|+|. ..++||++|.|++|.++.++..||+.|+++......... .....-......|.|||++.
T Consensus 105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3455699999998 578999999999999999999999999988655442111 11111223456899999999
Q ss_pred cCCCCcccchhhHHHHHHHHHhCCCC-CCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHH
Q 042486 518 NGLVSTKLDVYAFGVLMLEMLSGKEA-PALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIE 596 (635)
Q Consensus 518 ~~~~s~ksDV~SlGvvl~elltG~~p-~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~ 596 (635)
+...++++|+||+|+++|.+..|+.+ +...... .........+..-...++...+.++.+=+.
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~----------------~~~~~~~~~~~~~~~~~s~~~p~el~~~l~ 246 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGL----------------LSYSFSRNLLNAGAFGYSNNLPSELRESLK 246 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCc----------------chhhhhhcccccccccccccCcHHHHHHHH
Confidence 98889999999999999999955433 2211110 001111111111112233445566888889
Q ss_pred HhhhcCCCCCCCHHHHHH
Q 042486 597 SCLKKDPSGRPAMDKIAQ 614 (635)
Q Consensus 597 ~cl~~dP~~RPs~~evl~ 614 (635)
+++..++.-||++.++..
T Consensus 247 k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 247 KLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred HHhcCCcccCcchhhhhc
Confidence 999999999998877653
No 458
>PRK14125 cell division suppressor protein YneA; Provisional
Probab=98.73 E-value=1.2e-08 Score=86.24 Aligned_cols=50 Identities=18% Similarity=0.411 Sum_probs=42.5
Q ss_pred EEEEEeecCChHHhHHHHhCCC--------hhHHHHhcCCCCCCCCcccceecccCCCCC
Q 042486 184 LLSYLVKGGNTVYGISKRFGVD--------TDRTLEANGLSEGAPNIYPFTTLLVPLENP 235 (635)
Q Consensus 184 ~~~y~v~~gdtl~~Ia~~~~~~--------~~~l~~~N~~~~~~~~~~~~~~l~iP~~~~ 235 (635)
..+|+|++|||||+||++|+.+ ++.|++.|++.++ .|+|||+|.||....
T Consensus 36 ~~~~tV~~GDTLW~IA~~y~~~~~l~~~~~v~~I~~~N~l~~~--~I~~Gq~L~IP~~~~ 93 (103)
T PRK14125 36 YVEITVQEGDTLWALADQYAGKHHMAKNEFIEWVEDVNNLPSG--HIKAGDKLVIPVLKS 93 (103)
T ss_pred cEEEEECCCCCHHHHHHHhCCCcCCCHHHHHHHHHHhcCCCCC--cCCCCCEEEEecCCC
Confidence 3589999999999999999876 4678888999754 599999999997653
No 459
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.72 E-value=5.5e-08 Score=92.59 Aligned_cols=118 Identities=19% Similarity=0.198 Sum_probs=77.4
Q ss_pred eEEEeee-CCcEEEEEEecc---------------------------------ChHHHHHHHhhhccC--CcccEEEEEe
Q 042486 363 SVYRGKI-GGDFVAIKKVYG---------------------------------DASDQIKLLNKINHS--SLIRLLGICF 406 (635)
Q Consensus 363 ~Vy~g~~-~~~~vavK~~~~---------------------------------~~~~E~~~l~~l~h~--nIv~l~~~~~ 406 (635)
.||.|.. +|..+|||..+. ...+|.+.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 3899987 788999997632 023689999999766 466666542
Q ss_pred cCCeeEEEeeccc--CCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcc-cccCCCCCeEeecccCCCEEECCCCcEEEe
Q 042486 407 NGGNWYLVYENAV--NGSLSVWINDKGGKFLDWAQRIQIALDVATGLNY-LHSFTNPPHVHKDIKCSNVLLDTDFRAKIA 483 (635)
Q Consensus 407 ~~~~~~lV~E~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~-LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 483 (635)
..+|||||++ |..+..+.... ++......++.+++..+.. +|..+ ++|+|+.+.||+++++ .+.++
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEE
Confidence 3479999998 54554433221 1233455667777775555 46744 9999999999999887 99999
Q ss_pred eecCccccc
Q 042486 484 NFALARPAE 492 (635)
Q Consensus 484 Dfg~a~~~~ 492 (635)
|||.+....
T Consensus 149 Df~qav~~~ 157 (188)
T PF01163_consen 149 DFGQAVDSS 157 (188)
T ss_dssp -GTTEEETT
T ss_pred ecCcceecC
Confidence 999876443
No 460
>TIGR02899 spore_safA spore coat assembly protein SafA. in which one of which is found in most examples of endospore-forming bacteria. Lysin motifs are repeated in many proteins.
Probab=98.64 E-value=2.5e-08 Score=71.06 Aligned_cols=42 Identities=40% Similarity=0.704 Sum_probs=37.2
Q ss_pred eecCChHHhHHHHhCCChhHHHHhcC-CCCCCCCcccceecccC
Q 042486 189 VKGGNTVYGISKRFGVDTDRTLEANG-LSEGAPNIYPFTTLLVP 231 (635)
Q Consensus 189 v~~gdtl~~Ia~~~~~~~~~l~~~N~-~~~~~~~~~~~~~l~iP 231 (635)
|++|||+|+||++||++.++|.++|+ +.... .+++||+|.||
T Consensus 1 v~~gdtl~~IA~~~~~~~~~l~~~N~~~~~~~-~~~~g~~l~ip 43 (44)
T TIGR02899 1 VQKGDTLWKIAKKYGVDFDELIQANPQLSNPN-LIYPGMKIKIP 43 (44)
T ss_pred CCCCCCHHHHHHHHCcCHHHHHHHhhcCCCCC-CcCCCCEEecC
Confidence 68999999999999999999999997 43334 79999999998
No 461
>PRK14125 cell division suppressor protein YneA; Provisional
Probab=98.64 E-value=1.1e-07 Score=80.39 Aligned_cols=53 Identities=13% Similarity=0.203 Sum_probs=45.8
Q ss_pred cceeeeeecCCCCCCHHHHHHHhCCC--------hHhHhhhcCCCCCcccCCCcEEEEeeccc
Q 042486 56 CLAFLIFRSKPPFNTVASISTLLASK--------PSQLSKINSVSETATFETNQMVIVPVNCS 110 (635)
Q Consensus 56 c~~~~~y~~~~~g~tl~~Ia~~~~~~--------~~~i~~~N~~~~~~~~~~gq~l~ip~~~~ 110 (635)
+..|..|+|++ |||||+||++|+.+ ++.|.+.|++.+ +.|.+||.|.||+.-+
T Consensus 33 ~~~~~~~tV~~-GDTLW~IA~~y~~~~~l~~~~~v~~I~~~N~l~~-~~I~~Gq~L~IP~~~~ 93 (103)
T PRK14125 33 KNQYVEITVQE-GDTLWALADQYAGKHHMAKNEFIEWVEDVNNLPS-GHIKAGDKLVIPVLKS 93 (103)
T ss_pred CCCcEEEEECC-CCCHHHHHHHhCCCcCCCHHHHHHHHHHhcCCCC-CcCCCCCEEEEecCCC
Confidence 56888999999 99999999999865 578888999964 4799999999998655
No 462
>cd00118 LysM Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function.
Probab=98.53 E-value=1.2e-07 Score=67.58 Aligned_cols=45 Identities=36% Similarity=0.634 Sum_probs=40.9
Q ss_pred EEEeecCChHHhHHHHhCCChhHHHHhcCCCCCCCCcccceecccC
Q 042486 186 SYLVKGGNTVYGISKRFGVDTDRTLEANGLSEGAPNIYPFTTLLVP 231 (635)
Q Consensus 186 ~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~~~~~~~l~iP 231 (635)
+|+|++|||+++||++||++.++|.++|+..... .+.+|+.+.||
T Consensus 2 ~~~v~~gdt~~~ia~~~~~~~~~~~~~N~~~~~~-~~~~g~~l~ip 46 (46)
T cd00118 2 TYTVKKGDTLSSIAQRYGISVEELLKLNGLSDPD-NLQVGQKLKIP 46 (46)
T ss_pred EEEECCCCCHHHHHHHHCcCHHHHHHHcCCCCcc-ccCCCCEEecC
Confidence 6999999999999999999999999999984444 79999999887
No 463
>COG3858 Predicted glycosyl hydrolase [General function prediction only]
Probab=98.52 E-value=1.6e-07 Score=96.47 Aligned_cols=92 Identities=21% Similarity=0.170 Sum_probs=82.6
Q ss_pred eeeecCCCCCCHHHHHHHhCCChHhHhhhcCCCCCcccCCCcEEEEeeccccCCCCceeeeEEEEecCCchhhhhhhhcC
Q 042486 60 LIFRSKPPFNTVASISTLLASKPSQLSKINSVSETATFETNQMVIVPVNCSCSGKHYQANTTYFVQNGDTYFLIANNTFQ 139 (635)
Q Consensus 60 ~~y~~~~~g~tl~~Ia~~~~~~~~~i~~~N~~~~~~~~~~gq~l~ip~~~~c~~~~~~~~~~y~V~~gdtl~~Ia~~~~~ 139 (635)
.+|.|+| ||++..|+++|+.+..+|...|.+.+ +.+.+||++.||..-. .|.|++|||+++|| .++.
T Consensus 2 ~i~~~~p-g~~~~~i~~~~~~~~~~i~~~~~~~~-d~~~~~q~~~v~~~~~----------~y~~~~~d~~~Sia-~~~~ 68 (423)
T COG3858 2 SIHLVGP-GDSRLIIAVYFPYTNNRIVNGNDYTN-DDLVDGQTFVVPPSGH----------FYDVGPGDTLTSIA-RTVG 68 (423)
T ss_pred EEEEccC-Cceeeeehhhcccccccccccccccc-ccccCceeEEECCcce----------EEEecCCcchhhhh-hhhc
Confidence 4677787 99999999999999999977778777 8999999999997543 79999999999999 7888
Q ss_pred CCccHHHHHhhc--CCCCCCCCCcEEEEe
Q 042486 140 GLSTCQALQDQH--GNVSNFGVGTRLLAP 166 (635)
Q Consensus 140 ~l~~~~~l~~~N--~~~~~l~~G~~l~ip 166 (635)
||.+.+...| ..+..+.+|-.+.+|
T Consensus 69 --vt~~~~~~m~~~~~~~~l~~~~~l~~P 95 (423)
T COG3858 69 --VTQDSAAIMNFVICPGYLQYGLNLYIP 95 (423)
T ss_pred --CCHHHHHhhcccccccceeeeeEEecc
Confidence 9999999999 567799999999999
No 464
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.49 E-value=2.1e-06 Score=88.42 Aligned_cols=201 Identities=15% Similarity=0.206 Sum_probs=128.0
Q ss_pred eEEEeecccCC-Ccchhhc----ccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeee
Q 042486 411 WYLVYENAVNG-SLSVWIN----DKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANF 485 (635)
Q Consensus 411 ~~lV~E~~~~g-sL~~~l~----~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 485 (635)
.-++|..+.+. .+..++. +..-....|...++.+..++.+..-||.+| .+-+|++++|+|+.+++.+.|.|=
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcc
Confidence 56777776654 2222321 122335789999999999999999999976 999999999999999999999985
Q ss_pred cCcccccccCCceeeecccccCCCccCccccc-----cCCCCcccchhhHHHHHHHHHhC-CCCCCCCcch---hhHHH-
Q 042486 486 ALARPAERQEGEFALTSHIVGTKGYMAPEYLE-----NGLVSTKLDVYAFGVLMLEMLSG-KEAPALYSEE---NMLLV- 555 (635)
Q Consensus 486 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SlGvvl~elltG-~~p~~~~~~~---~~~l~- 555 (635)
..-..... .......+|...|.+||.-. +..-+...|-|.||+++++++.| +.|+...... ..-+.
T Consensus 162 Dsfqi~~n----g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~ 237 (637)
T COG4248 162 DSFQINAN----GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET 237 (637)
T ss_pred cceeeccC----CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh
Confidence 43322211 12233467899999999754 34457789999999999999887 7887642110 00000
Q ss_pred HhhhcccccCCchhhhhhhcCCcCCCCCC-hHHHHHHHHHHHHhhhc--CCCCCCCHHHHHHHHHHHHhh
Q 042486 556 DVLNPVLHKEDGEESLRHLMDPSMQGNYP-PVTAILVIRLIESCLKK--DPSGRPAMDKIAQSISRFLNA 622 (635)
Q Consensus 556 ~~~~~~~~~~~~~~~l~~~~d~~~~~~~~-~~~~~~l~~li~~cl~~--dP~~RPs~~evl~~L~~~~~~ 622 (635)
+.....+.... ..-... .+. ....| ...+..+..|..+|+.. .+.-|||++..+..|..+.++
T Consensus 238 ~Ia~g~f~ya~--~~~~g~-~p~-P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 238 DIAHGRFAYAS--DQRRGL-KPP-PRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred hhhcceeeech--hccCCC-CCC-CCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 11111111000 000000 010 11112 23455678888999975 366899999988888776544
No 465
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.46 E-value=1.4e-06 Score=95.35 Aligned_cols=167 Identities=15% Similarity=0.167 Sum_probs=101.3
Q ss_pred cchhhhhhhhhhhhhhcccccccHHHHHHhh------------cCCCCCCccc---ceEEEeee-CCcEEEEEEeccChH
Q 042486 321 LDEESRDFLESISDIAQSLKVYTFEELQAAT------------DDFNPSCWIK---GSVYRGKI-GGDFVAIKKVYGDAS 384 (635)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~at------------~~f~~~~~ig---g~Vy~g~~-~~~~vavK~~~~~~~ 384 (635)
.+.-+.++...+....+....++++++.+.. .+|+..-.-. |.||+|++ +|+.||||+.++.+.
T Consensus 83 ~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~ 162 (517)
T COG0661 83 PDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIR 162 (517)
T ss_pred ccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChH
Confidence 3344455566666667777777776654333 3455322211 89999999 699999998865321
Q ss_pred -----------------------------------------------HHHHHHhhhc----cCCcccEEEEEe-cCCeeE
Q 042486 385 -----------------------------------------------DQIKLLNKIN----HSSLIRLLGICF-NGGNWY 412 (635)
Q Consensus 385 -----------------------------------------------~E~~~l~~l~----h~nIv~l~~~~~-~~~~~~ 412 (635)
+|..-+.+++ +..-+++=.++. -.+...
T Consensus 163 ~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~V 242 (517)
T COG0661 163 ERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRV 242 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcE
Confidence 2333333331 122222222332 245668
Q ss_pred EEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCccccc
Q 042486 413 LVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAE 492 (635)
Q Consensus 413 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 492 (635)
|+|||++|-.+.+...-.. ...+.+.+.....++.--.-+-| +++|.|.+|.||+++.++++.+.|||+.....
T Consensus 243 LtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~~q~~~d-----gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 243 LTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAFLRQLLRD-----GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred EEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHHHHHHHhc-----CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 9999999999988852222 12453333332222222112223 39999999999999999999999999987655
Q ss_pred c
Q 042486 493 R 493 (635)
Q Consensus 493 ~ 493 (635)
.
T Consensus 317 ~ 317 (517)
T COG0661 317 P 317 (517)
T ss_pred H
Confidence 4
No 466
>TIGR02907 spore_VI_D stage VI sporulation protein D. SpoVID, the stage VI sporulation protein D, is restricted to endospore-forming members of the bacteria, all of which are found among the Firmicutes. It is widely distributed but not quite universal in this group. Between well-conserved N-terminal and C-terminal domains is a poorly conserved, low-complexity region of variable length, rich enough in glutamic acid to cause spurious BLAST search results unless a filter is used. The seed alignment for this model was trimmed, in effect, by choosing member sequences in which these regions are relatively short. SpoVID is involved in spore coat assembly by the mother cell compartment late in the process of sporulation.
Probab=98.43 E-value=2.1e-07 Score=93.18 Aligned_cols=48 Identities=21% Similarity=0.368 Sum_probs=43.6
Q ss_pred eeEEEEEeecCChHHhHHHHhCCChhHHHHhcCCCCCCCCcccceecccC
Q 042486 182 HYLLSYLVKGGNTVYGISKRFGVDTDRTLEANGLSEGAPNIYPFTTLLVP 231 (635)
Q Consensus 182 ~~~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~~~~~~~l~iP 231 (635)
.-+.+|+|++|||||.||+|||+++++|+++|++. ++ .|++||+|+||
T Consensus 291 ~~~~~YiVq~GDTL~sIAkRYGVSV~~L~r~N~L~-~~-~L~~GQ~L~IP 338 (338)
T TIGR02907 291 TKLRMCIVQEGDTIETIAERYEISVSQLIRHNQLE-DF-EVNEGQILYIP 338 (338)
T ss_pred cccEEEEECCCCCHHHHHHHHCcCHHHHHHHhCCC-cc-ccCCCCEEEeC
Confidence 34458999999999999999999999999999997 44 79999999998
No 467
>PRK10871 nlpD lipoprotein NlpD; Provisional
Probab=98.39 E-value=3e-07 Score=93.23 Aligned_cols=48 Identities=25% Similarity=0.230 Sum_probs=44.7
Q ss_pred EEEeecCChHHhHHHHhCCChhHHHHhcCCCCCCCCcccceecccCCCC
Q 042486 186 SYLVKGGNTVYGISKRFGVDTDRTLEANGLSEGAPNIYPFTTLLVPLEN 234 (635)
Q Consensus 186 ~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~~~~~~~l~iP~~~ 234 (635)
+|+|++|||||.||.+||+++.+|.+||+|.++. .|++||+|.||...
T Consensus 62 ~y~Vk~GDTL~~IA~~~g~~~~~La~~N~l~~p~-~I~~GQ~L~i~~~~ 109 (319)
T PRK10871 62 TYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPY-SLNVGQTLQVGNAS 109 (319)
T ss_pred ceEECCCCHHHHHHHHHCcCHHHHHHhcCCCCCc-cccCCCEEEeCCCC
Confidence 7999999999999999999999999999998777 89999999998643
No 468
>COG3858 Predicted glycosyl hydrolase [General function prediction only]
Probab=98.38 E-value=4.2e-07 Score=93.44 Aligned_cols=96 Identities=21% Similarity=0.217 Sum_probs=80.4
Q ss_pred EEEEecCCchhhhhhhhcCCCccHHHHHhhc-CCCCCCCCCcEEEEeeeccCCCCCCCCCCeeeEEEEEeecCChHHhHH
Q 042486 121 TYFVQNGDTYFLIANNTFQGLSTCQALQDQH-GNVSNFGVGTRLLAPLRCACPTKNQTDSGVHYLLSYLVKGGNTVYGIS 199 (635)
Q Consensus 121 ~y~V~~gdtl~~Ia~~~~~~l~~~~~l~~~N-~~~~~l~~G~~l~ip~~~~c~~~~~~~~~~~~~~~y~v~~gdtl~~Ia 199 (635)
.|.|++||+++.|| .+|. .+...|...| ...+.|.+||.+.||.. . ..|.|++|||+++||
T Consensus 3 i~~~~pg~~~~~i~-~~~~--~~~~~i~~~~~~~~d~~~~~q~~~v~~~-------------~--~~y~~~~~d~~~Sia 64 (423)
T COG3858 3 IHLVGPGDSRLIIA-VYFP--YTNNRIVNGNDYTNDDLVDGQTFVVPPS-------------G--HFYDVGPGDTLTSIA 64 (423)
T ss_pred EEEccCCceeeeeh-hhcc--ccccccccccccccccccCceeEEECCc-------------c--eEEEecCCcchhhhh
Confidence 58999999999999 7888 6667776666 33389999999999931 1 279999999999999
Q ss_pred HHhCCChhHHHHhcCCCCCCCCcccceecccCCCCC
Q 042486 200 KRFGVDTDRTLEANGLSEGAPNIYPFTTLLVPLENP 235 (635)
Q Consensus 200 ~~~~~~~~~l~~~N~~~~~~~~~~~~~~l~iP~~~~ 235 (635)
++|||+.+.+..+|....+. .+.+|-.+.+|....
T Consensus 65 ~~~~vt~~~~~~m~~~~~~~-~l~~~~~l~~P~~~~ 99 (423)
T COG3858 65 RTVGVTQDSAAIMNFVICPG-YLQYGLNLYIPSARK 99 (423)
T ss_pred hhhcCCHHHHHhhccccccc-ceeeeeEEeccCCCC
Confidence 99999999999999876555 788998999987653
No 469
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.35 E-value=2.5e-06 Score=83.18 Aligned_cols=104 Identities=21% Similarity=0.198 Sum_probs=82.0
Q ss_pred hHHHHHHHhhhccCC--cccEEEEEecCC----eeEEEeecccCC-CcchhhcccCCCCCCHHHHHHHHHHHHhhhcccc
Q 042486 383 ASDQIKLLNKINHSS--LIRLLGICFNGG----NWYLVYENAVNG-SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLH 455 (635)
Q Consensus 383 ~~~E~~~l~~l~h~n--Iv~l~~~~~~~~----~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH 455 (635)
..+|...+.++.... ..+.+++..... ..++|+|++++. +|.+++..... ++......++.+++..+.-||
T Consensus 58 a~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 58 AKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHHHHH
Confidence 457888888885443 456677765422 348999999884 79999865332 566778889999999999999
Q ss_pred cCCCCCeEeecccCCCEEECCCC---cEEEeeecCcccc
Q 042486 456 SFTNPPHVHKDIKCSNVLLDTDF---RAKIANFALARPA 491 (635)
Q Consensus 456 ~~~~~~ivH~Dikp~NIll~~~~---~~kl~Dfg~a~~~ 491 (635)
+.+ |+|+|+++.|||++.+. .+.++||+.++..
T Consensus 136 ~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 136 DAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 955 99999999999998887 8999999987643
No 470
>TIGR02899 spore_safA spore coat assembly protein SafA. in which one of which is found in most examples of endospore-forming bacteria. Lysin motifs are repeated in many proteins.
Probab=98.34 E-value=7e-07 Score=63.43 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=37.7
Q ss_pred cCCCCCCHHHHHHHhCCChHhHhhhcC-CCCCcccCCCcEEEEee
Q 042486 64 SKPPFNTVASISTLLASKPSQLSKINS-VSETATFETNQMVIVPV 107 (635)
Q Consensus 64 ~~~~g~tl~~Ia~~~~~~~~~i~~~N~-~~~~~~~~~gq~l~ip~ 107 (635)
|++ |||||+||++|++++++|.++|+ +.+...+.+||.|.||.
T Consensus 1 v~~-gdtl~~IA~~~~~~~~~l~~~N~~~~~~~~~~~g~~l~ip~ 44 (44)
T TIGR02899 1 VQK-GDTLWKIAKKYGVDFDELIQANPQLSNPNLIYPGMKIKIPS 44 (44)
T ss_pred CCC-CCCHHHHHHHHCcCHHHHHHHhhcCCCCCCcCCCCEEecCC
Confidence 355 99999999999999999999996 55567799999999983
No 471
>PRK09902 hypothetical protein; Provisional
Probab=98.30 E-value=7.1e-06 Score=78.77 Aligned_cols=125 Identities=14% Similarity=0.184 Sum_probs=95.8
Q ss_pred ceEEEeeeCCcEEEEEEecc-------------ChHHHHHHHhhhccCC--cccEEEEEe---cCC--eeEEEeecccC-
Q 042486 362 GSVYRGKIGGDFVAIKKVYG-------------DASDQIKLLNKINHSS--LIRLLGICF---NGG--NWYLVYENAVN- 420 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~-------------~~~~E~~~l~~l~h~n--Iv~l~~~~~---~~~--~~~lV~E~~~~- 420 (635)
+.|++-.++|..+-+|+-.. .+.+|+..|.++...+ +.+.. ++. ... .-+||+|-+++
T Consensus 32 SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVTe~L~g~ 110 (216)
T PRK09902 32 SGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVTEDMAGF 110 (216)
T ss_pred ceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEEEeCCCC
Confidence 57888888888899997642 3678999999986433 44444 332 122 35899997764
Q ss_pred CCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCc--EEEeeecCccc
Q 042486 421 GSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFR--AKIANFALARP 490 (635)
Q Consensus 421 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~--~kl~Dfg~a~~ 490 (635)
-+|.+++........+...+..++.+++..+.-||+.+ +.|+|+.+.||+++.++. ++++||.-++.
T Consensus 111 ~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 111 ISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred ccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 58999986544344678888999999999999999965 999999999999986666 99999987763
No 472
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.19 E-value=1.4e-05 Score=87.18 Aligned_cols=162 Identities=12% Similarity=0.121 Sum_probs=99.1
Q ss_pred hhhhhhhhhhhhhcccccccHHHHHHhhc------------CCCCCCcc---cceEEEeee-CCcEEEEEEeccChH---
Q 042486 324 ESRDFLESISDIAQSLKVYTFEELQAATD------------DFNPSCWI---KGSVYRGKI-GGDFVAIKKVYGDAS--- 384 (635)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~el~~at~------------~f~~~~~i---gg~Vy~g~~-~~~~vavK~~~~~~~--- 384 (635)
-+.++...++.+.+....++++|+.+... .|++.-.- .|.||++++ +|..||||+-++.+.
T Consensus 122 lP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~ 201 (538)
T KOG1235|consen 122 LPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLI 201 (538)
T ss_pred CcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHH
Confidence 34455566666677777777777654432 34432211 189999999 889999998765311
Q ss_pred -----------------------------------HHHHHHh----------hhccCC------cccEEEEEecCCeeEE
Q 042486 385 -----------------------------------DQIKLLN----------KINHSS------LIRLLGICFNGGNWYL 413 (635)
Q Consensus 385 -----------------------------------~E~~~l~----------~l~h~n------Iv~l~~~~~~~~~~~l 413 (635)
.|++.+. .+.|-+ |.+++-.+ .....|
T Consensus 202 ~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVL 279 (538)
T KOG1235|consen 202 MLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVL 279 (538)
T ss_pred HHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhc--CcceEE
Confidence 1222222 223444 33333222 345789
Q ss_pred EeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECC----CCcEEEeeecCcc
Q 042486 414 VYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDT----DFRAKIANFALAR 489 (635)
Q Consensus 414 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~----~~~~kl~Dfg~a~ 489 (635)
+|||++|..+.|.-.-... .++...+..-+.+...-+-+- .|++|+|-+|.||+++. ++++.+.|||+..
T Consensus 280 tME~~~G~~i~Dl~~i~~~-gi~~~~i~~~l~~~~~~qIf~-----~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~ 353 (538)
T KOG1235|consen 280 TMEYVDGIKINDLDAIDKR-GISPHDILNKLVEAYLEQIFK-----TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYA 353 (538)
T ss_pred EEEecCCccCCCHHHHHHc-CCCHHHHHHHHHHHHHHHHHh-----cCCccCCCCCCcEEEecCCCCCccEEEEcccccc
Confidence 9999999988776522111 155554444333332222222 34999999999999983 6789999999987
Q ss_pred cccc
Q 042486 490 PAER 493 (635)
Q Consensus 490 ~~~~ 493 (635)
....
T Consensus 354 ~is~ 357 (538)
T KOG1235|consen 354 VISH 357 (538)
T ss_pred cccH
Confidence 6543
No 473
>cd00118 LysM Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function.
Probab=98.19 E-value=2.7e-06 Score=60.29 Aligned_cols=45 Identities=22% Similarity=0.351 Sum_probs=41.3
Q ss_pred eeecCCCCCCHHHHHHHhCCChHhHhhhcCCCCCcccCCCcEEEEe
Q 042486 61 IFRSKPPFNTVASISTLLASKPSQLSKINSVSETATFETNQMVIVP 106 (635)
Q Consensus 61 ~y~~~~~g~tl~~Ia~~~~~~~~~i~~~N~~~~~~~~~~gq~l~ip 106 (635)
.|++++ |||+++||..|+++..+|+++|+......+.+|+.|.||
T Consensus 2 ~~~v~~-gdt~~~ia~~~~~~~~~~~~~N~~~~~~~~~~g~~l~ip 46 (46)
T cd00118 2 TYTVKK-GDTLSSIAQRYGISVEELLKLNGLSDPDNLQVGQKLKIP 46 (46)
T ss_pred EEEECC-CCCHHHHHHHHCcCHHHHHHHcCCCCccccCCCCEEecC
Confidence 478888 999999999999999999999998667789999999987
No 474
>smart00257 LysM Lysin motif.
Probab=98.18 E-value=2e-06 Score=60.30 Aligned_cols=44 Identities=30% Similarity=0.508 Sum_probs=37.9
Q ss_pred EEEeecCChHHhHHHHhCCChhHHHHhcCCCCCCCCcccceeccc
Q 042486 186 SYLVKGGNTVYGISKRFGVDTDRTLEANGLSEGAPNIYPFTTLLV 230 (635)
Q Consensus 186 ~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~~~~~~~l~i 230 (635)
+|+|++|||+++||++||++..++.++|+..... .+.+|+.+.|
T Consensus 1 ~~~v~~gdt~~~ia~~~~~~~~~~~~~N~~~~~~-~~~~g~~l~i 44 (44)
T smart00257 1 TYTVKKGDTLSSIARRYGISVSDLLELNNILDPD-NLQVGQKLKI 44 (44)
T ss_pred CeEeCCCCCHHHHHHHhCCCHHHHHHHcCCCCcc-ccCCCCEEeC
Confidence 4899999999999999999999999999954444 6899987754
No 475
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.14 E-value=1.2e-05 Score=79.18 Aligned_cols=116 Identities=18% Similarity=0.110 Sum_probs=80.5
Q ss_pred ceEEEeee-CCcEEEEEEecc-----------------------------ChHHHHHHHhhhccC--CcccEEEEEecCC
Q 042486 362 GSVYRGKI-GGDFVAIKKVYG-----------------------------DASDQIKLLNKINHS--SLIRLLGICFNGG 409 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~-----------------------------~~~~E~~~l~~l~h~--nIv~l~~~~~~~~ 409 (635)
+.||.|.. .|.++|||.-+. ...+|.+.|.++... .+.+.+++ +
T Consensus 105 sdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~P~~~----n 180 (304)
T COG0478 105 SDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPKPIAW----N 180 (304)
T ss_pred ceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCCcccc----c
Confidence 78999998 699999995321 134789999998655 66666653 4
Q ss_pred eeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 410 NWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 410 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
...+||||.+|--|...-- +....-.|+..|+.-+.-+-.. ++||+|+.+-||+++++|.+.++||--+.
T Consensus 181 RHaVvMe~ieG~eL~~~r~-------~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 181 RHAVVMEYIEGVELYRLRL-------DVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred cceeeeehcccceeecccC-------cccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecCCCEEEEeCcccc
Confidence 4579999998866654331 1222223333444433333343 49999999999999999999999997655
Q ss_pred cc
Q 042486 490 PA 491 (635)
Q Consensus 490 ~~ 491 (635)
..
T Consensus 251 ~~ 252 (304)
T COG0478 251 PI 252 (304)
T ss_pred cC
Confidence 43
No 476
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=98.12 E-value=2.1e-06 Score=91.15 Aligned_cols=46 Identities=30% Similarity=0.447 Sum_probs=42.4
Q ss_pred EEEeecCChHHhHHHHhCCChhHHHHhcCCCCCCCCcccceecccCCC
Q 042486 186 SYLVKGGNTVYGISKRFGVDTDRTLEANGLSEGAPNIYPFTTLLVPLE 233 (635)
Q Consensus 186 ~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~~~~~~~l~iP~~ 233 (635)
+|+|++|||||.||++||+++++|+++|++.. + .|++||.|.||..
T Consensus 29 tytVq~GDTLw~IA~~ygvtv~~I~~~N~l~~-~-~I~~Gq~L~Ip~~ 74 (481)
T PRK13914 29 TVVVEAGDTLWGIAQSKGTTVDAIKKANNLTT-D-KIVPGQKLQVNEV 74 (481)
T ss_pred eEEECCCCCHHHHHHHHCCCHHHHHHHhCCCc-c-cccCCCEEEeCCC
Confidence 79999999999999999999999999999964 3 6999999999954
No 477
>PRK10871 nlpD lipoprotein NlpD; Provisional
Probab=98.08 E-value=7.4e-06 Score=83.27 Aligned_cols=48 Identities=15% Similarity=0.134 Sum_probs=45.1
Q ss_pred eeeecCCCCCCHHHHHHHhCCChHhHhhhcCCCCCcccCCCcEEEEeec
Q 042486 60 LIFRSKPPFNTVASISTLLASKPSQLSKINSVSETATFETNQMVIVPVN 108 (635)
Q Consensus 60 ~~y~~~~~g~tl~~Ia~~~~~~~~~i~~~N~~~~~~~~~~gq~l~ip~~ 108 (635)
-.|+|++ ||||+.||.+||+++.+|+++|++.++..|.+||.|.||.+
T Consensus 61 ~~y~Vk~-GDTL~~IA~~~g~~~~~La~~N~l~~p~~I~~GQ~L~i~~~ 108 (319)
T PRK10871 61 STYTVKK-GDTLFYIAWITGNDFRDLAQRNNIQAPYSLNVGQTLQVGNA 108 (319)
T ss_pred CceEECC-CCHHHHHHHHHCcCHHHHHHhcCCCCCccccCCCEEEeCCC
Confidence 3699999 99999999999999999999999998999999999999854
No 478
>TIGR02907 spore_VI_D stage VI sporulation protein D. SpoVID, the stage VI sporulation protein D, is restricted to endospore-forming members of the bacteria, all of which are found among the Firmicutes. It is widely distributed but not quite universal in this group. Between well-conserved N-terminal and C-terminal domains is a poorly conserved, low-complexity region of variable length, rich enough in glutamic acid to cause spurious BLAST search results unless a filter is used. The seed alignment for this model was trimmed, in effect, by choosing member sequences in which these regions are relatively short. SpoVID is involved in spore coat assembly by the mother cell compartment late in the process of sporulation.
Probab=98.04 E-value=5.2e-06 Score=83.28 Aligned_cols=47 Identities=17% Similarity=0.226 Sum_probs=43.8
Q ss_pred eeeeeecCCCCCCHHHHHHHhCCChHhHhhhcCCCCCcccCCCcEEEEe
Q 042486 58 AFLIFRSKPPFNTVASISTLLASKPSQLSKINSVSETATFETNQMVIVP 106 (635)
Q Consensus 58 ~~~~y~~~~~g~tl~~Ia~~~~~~~~~i~~~N~~~~~~~~~~gq~l~ip 106 (635)
.+..|+|++ ||||++||++||++++.|+++|++. ++.+.+||.|+||
T Consensus 292 ~~~~YiVq~-GDTL~sIAkRYGVSV~~L~r~N~L~-~~~L~~GQ~L~IP 338 (338)
T TIGR02907 292 KLRMCIVQE-GDTIETIAERYEISVSQLIRHNQLE-DFEVNEGQILYIP 338 (338)
T ss_pred ccEEEEECC-CCCHHHHHHHHCcCHHHHHHHhCCC-ccccCCCCEEEeC
Confidence 567799998 9999999999999999999999996 7899999999998
No 479
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.01 E-value=1.8e-05 Score=75.58 Aligned_cols=104 Identities=23% Similarity=0.184 Sum_probs=81.2
Q ss_pred HHHHHHhhhcc-CCcccEEEEEecCCeeEEEeecccCCCcchhhcc-cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCe
Q 042486 385 DQIKLLNKINH-SSLIRLLGICFNGGNWYLVYENAVNGSLSVWIND-KGGKFLDWAQRIQIALDVATGLNYLHSFTNPPH 462 (635)
Q Consensus 385 ~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~i 462 (635)
+|.-+|+.+++ +++.+++|+|- .++|.||...+++...-.. ......+|..|.+|+.++++.+++|++.....+
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~ 83 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF 83 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 58888888876 69999999992 2679999987765421100 000126999999999999999999998544448
Q ss_pred EeecccCCCEEECCCCcEEEeeecCccccc
Q 042486 463 VHKDIKCSNVLLDTDFRAKIANFALARPAE 492 (635)
Q Consensus 463 vH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 492 (635)
...|++++|+-+++++++|++|...+....
T Consensus 84 ~lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 84 YLCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred EEeecchHHeEEeCCCcEEEEechhcchhH
Confidence 889999999999999999999998876543
No 480
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.00 E-value=5.5e-05 Score=75.70 Aligned_cols=128 Identities=12% Similarity=0.072 Sum_probs=81.5
Q ss_pred ceEEEeeeCCcEEEEEEecc----ChHHHHHHHhhhc-cCCcccEEEEEecCCeeEEEeecccCCCcchhh---------
Q 042486 362 GSVYRGKIGGDFVAIKKVYG----DASDQIKLLNKIN-HSSLIRLLGICFNGGNWYLVYENAVNGSLSVWI--------- 427 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~----~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l--------- 427 (635)
..||+...++..+.||.... +..+|+++++.+. +--+.+++++...++..++|||+++|.+|.+..
T Consensus 13 ~~v~~~~~~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~ 92 (244)
T cd05150 13 ATVYRLDGKNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLV 92 (244)
T ss_pred CeEEEEcCCCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCHHHHH
Confidence 67999987777888888765 4788999999884 444667888777666789999999998776432
Q ss_pred ----------cccC--CCCCCH--HHHHHH-----------------------HHHHHhhhcccc-cCCCCCeEeecccC
Q 042486 428 ----------NDKG--GKFLDW--AQRIQI-----------------------ALDVATGLNYLH-SFTNPPHVHKDIKC 469 (635)
Q Consensus 428 ----------~~~~--~~~l~~--~~~~~i-----------------------~~~ia~aL~~LH-~~~~~~ivH~Dikp 469 (635)
+... ...... ..+... ..++...|.... ....+.++|+|+.|
T Consensus 93 ~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~ 172 (244)
T cd05150 93 DALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVVTHGDACL 172 (244)
T ss_pred HHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEEECCCCCC
Confidence 1100 001110 011100 011111111100 01125589999999
Q ss_pred CCEEECCCCcEEEeeecCcc
Q 042486 470 SNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 470 ~NIll~~~~~~kl~Dfg~a~ 489 (635)
.||+++++....|+||+.+.
T Consensus 173 ~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 173 PNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred ccEEEeCCcEEEEEEccccc
Confidence 99999998778899999775
No 481
>PRK11198 LysM domain/BON superfamily protein; Provisional
Probab=97.94 E-value=7.6e-06 Score=74.72 Aligned_cols=45 Identities=36% Similarity=0.517 Sum_probs=39.2
Q ss_pred EEEeecCChHHhHHHHhCC---ChhHHHHhcC--CCCCCCCcccceecccC
Q 042486 186 SYLVKGGNTVYGISKRFGV---DTDRTLEANG--LSEGAPNIYPFTTLLVP 231 (635)
Q Consensus 186 ~y~v~~gdtl~~Ia~~~~~---~~~~l~~~N~--~~~~~~~~~~~~~l~iP 231 (635)
+|+|++|||||+||++|+. ....|+++|+ +.... .|+|||+|.||
T Consensus 97 ~y~Vk~GDTL~~IA~~~~g~~~~~~~I~~~N~~~l~~~~-~I~pGq~L~IP 146 (147)
T PRK11198 97 FYTVKSGDTLSAIAKKVYGNANKYNKIFEANKPMLKSPD-KIYPGQVLRIP 146 (147)
T ss_pred EEEECCCCCHHHHHHHHcCChhhHHHHHHhhhhcCCCcC-CcCcCCEEecC
Confidence 7999999999999999853 4678999998 66555 79999999998
No 482
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.93 E-value=4.4e-05 Score=73.70 Aligned_cols=114 Identities=18% Similarity=0.146 Sum_probs=75.7
Q ss_pred ceEEEeeeCCcEEEEEEeccCh----------------HHHHHHHhhhccCC---cccEEEEEe-----cCCeeEEEeec
Q 042486 362 GSVYRGKIGGDFVAIKKVYGDA----------------SDQIKLLNKINHSS---LIRLLGICF-----NGGNWYLVYEN 417 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~~~----------------~~E~~~l~~l~h~n---Iv~l~~~~~-----~~~~~~lV~E~ 417 (635)
..|.+-..++...++|..+.+. .+++..+.+++... ...++.... -....+|+|||
T Consensus 45 ~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EY 124 (229)
T PF06176_consen 45 NYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEY 124 (229)
T ss_pred cEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEE
Confidence 3466666688889999775532 23344444443322 223222222 12345799999
Q ss_pred ccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 418 AVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 418 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
++|..|.+... +++ .+...+.+++.-||+.| +.|+|.+|.|++++++ .++++||+..+
T Consensus 125 IeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~-~i~iID~~~k~ 182 (229)
T PF06176_consen 125 IEGVELNDIED------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNN-GIRIIDTQGKR 182 (229)
T ss_pred ecCeecccchh------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECC-cEEEEECcccc
Confidence 99988877642 222 24456777899999966 9999999999999855 59999998765
No 483
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.85 E-value=0.00014 Score=71.76 Aligned_cols=125 Identities=13% Similarity=0.104 Sum_probs=74.5
Q ss_pred ceEEEeeeCCcEEEEEEecc-----ChHHHHHHHhhhccCC--cccEEEEEecCCeeEEEeecccCCC-cchhh------
Q 042486 362 GSVYRGKIGGDFVAIKKVYG-----DASDQIKLLNKINHSS--LIRLLGICFNGGNWYLVYENAVNGS-LSVWI------ 427 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~-----~~~~E~~~l~~l~h~n--Iv~l~~~~~~~~~~~lV~E~~~~gs-L~~~l------ 427 (635)
+.||+. .++.+++|.... +..+|.++++.+..-. +.+.+++....+...+|||+++|.. +...+
T Consensus 15 ~~~y~~--~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~~~~~~~~~ 92 (226)
T TIGR02172 15 GESYTH--KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSRIISDNPSR 92 (226)
T ss_pred cceeEe--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchhhhhcCCHHH
Confidence 578873 244567887654 3568999999987544 4678888877778899999998863 21111
Q ss_pred ---------------cccCCCCCCHHHHHH-HHHHH----------Hh-hhccccc-CCCCCeEeecccCCCEEECCCCc
Q 042486 428 ---------------NDKGGKFLDWAQRIQ-IALDV----------AT-GLNYLHS-FTNPPHVHKDIKCSNVLLDTDFR 479 (635)
Q Consensus 428 ---------------~~~~~~~l~~~~~~~-i~~~i----------a~-aL~~LH~-~~~~~ivH~Dikp~NIll~~~~~ 479 (635)
+.-............ +..++ .. ...+|.. .....++|+|+.|.||++++++
T Consensus 93 ~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~Nii~~~~~- 171 (226)
T TIGR02172 93 LEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGNLITSGKG- 171 (226)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCcEEEcCCC-
Confidence 110000011111000 00000 00 0111111 1124578999999999999888
Q ss_pred EEEeeecCcc
Q 042486 480 AKIANFALAR 489 (635)
Q Consensus 480 ~kl~Dfg~a~ 489 (635)
+.++||+.+.
T Consensus 172 ~~iIDwe~a~ 181 (226)
T TIGR02172 172 TYWIDLGDFG 181 (226)
T ss_pred cEEEechhcC
Confidence 9999999875
No 484
>PRK11198 LysM domain/BON superfamily protein; Provisional
Probab=97.73 E-value=6.3e-05 Score=68.68 Aligned_cols=47 Identities=21% Similarity=0.287 Sum_probs=39.5
Q ss_pred eEEEEecCCchhhhhhhhcCCCccHHHHHhhc--C--CCCCCCCCcEEEEe
Q 042486 120 TTYFVQNGDTYFLIANNTFQGLSTCQALQDQH--G--NVSNFGVGTRLLAP 166 (635)
Q Consensus 120 ~~y~V~~gdtl~~Ia~~~~~~l~~~~~l~~~N--~--~~~~l~~G~~l~ip 166 (635)
..|+|++|||||.||.++|..-..++.|.++| . +++.|++||+|.||
T Consensus 96 ~~y~Vk~GDTL~~IA~~~~g~~~~~~~I~~~N~~~l~~~~~I~pGq~L~IP 146 (147)
T PRK11198 96 QFYTVKSGDTLSAIAKKVYGNANKYNKIFEANKPMLKSPDKIYPGQVLRIP 146 (147)
T ss_pred eEEEECCCCCHHHHHHHHcCChhhHHHHHHhhhhcCCCcCCcCcCCEEecC
Confidence 46999999999999966666556788999999 2 46789999999998
No 485
>smart00257 LysM Lysin motif.
Probab=97.69 E-value=6.6e-05 Score=52.31 Aligned_cols=43 Identities=19% Similarity=0.286 Sum_probs=37.8
Q ss_pred eecCCCCCCHHHHHHHhCCChHhHhhhcCCCCCcccCCCcEEEE
Q 042486 62 FRSKPPFNTVASISTLLASKPSQLSKINSVSETATFETNQMVIV 105 (635)
Q Consensus 62 y~~~~~g~tl~~Ia~~~~~~~~~i~~~N~~~~~~~~~~gq~l~i 105 (635)
|++++ |||+++||+.|+++..+|.++|+......+.+|+.+.|
T Consensus 2 ~~v~~-gdt~~~ia~~~~~~~~~~~~~N~~~~~~~~~~g~~l~i 44 (44)
T smart00257 2 YTVKK-GDTLSSIARRYGISVSDLLELNNILDPDNLQVGQKLKI 44 (44)
T ss_pred eEeCC-CCCHHHHHHHhCCCHHHHHHHcCCCCccccCCCCEEeC
Confidence 77888 99999999999999999999998656677889988764
No 486
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.66 E-value=0.00051 Score=67.17 Aligned_cols=121 Identities=21% Similarity=0.216 Sum_probs=81.6
Q ss_pred ceEEEeee-CCcEEEEEEeccC-------------------------------hHHHHHHHhhhcc--CCcccEEEEEec
Q 042486 362 GSVYRGKI-GGDFVAIKKVYGD-------------------------------ASDQIKLLNKINH--SSLIRLLGICFN 407 (635)
Q Consensus 362 g~Vy~g~~-~~~~vavK~~~~~-------------------------------~~~E~~~l~~l~h--~nIv~l~~~~~~ 407 (635)
..||+|.. ++..+|||+.+.. ..+|+.-|+++.. =.+.+-+++.
T Consensus 62 A~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~-- 139 (268)
T COG1718 62 ANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPEPIAFR-- 139 (268)
T ss_pred eEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCceeec--
Confidence 58999886 6899999987532 1246667777643 3344445443
Q ss_pred CCeeEEEeecccCC-CcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeec
Q 042486 408 GGNWYLVYENAVNG-SLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFA 486 (635)
Q Consensus 408 ~~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 486 (635)
+-.|||||+... .-.-.|.+-. +...+...+..++++.+.-|-. ..++||+||..-|||+. ++.+.++|||
T Consensus 140 --~nVLvMEfIg~~g~pAP~LkDv~---~e~~e~~~~~~~~v~~~~~l~~--~a~LVHgDLSEyNiL~~-~~~p~iID~~ 211 (268)
T COG1718 140 --NNVLVMEFIGDDGLPAPRLKDVP---LELEEAEGLYEDVVEYMRRLYK--EAGLVHGDLSEYNILVH-DGEPYIIDVS 211 (268)
T ss_pred --CCeEEEEeccCCCCCCCCcccCC---cCchhHHHHHHHHHHHHHHHHH--hcCcccccchhhheEEE-CCeEEEEECc
Confidence 236999998654 1111222211 3333566667777777777766 23499999999999999 8899999999
Q ss_pred Cccccc
Q 042486 487 LARPAE 492 (635)
Q Consensus 487 ~a~~~~ 492 (635)
-+....
T Consensus 212 QaV~~~ 217 (268)
T COG1718 212 QAVTID 217 (268)
T ss_pred cccccC
Confidence 887554
No 487
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.60 E-value=3.4e-05 Score=83.68 Aligned_cols=170 Identities=20% Similarity=0.188 Sum_probs=121.4
Q ss_pred ceEEEeeeC-CcEEEEEEeccC--hHHHHHHHhhhccCC-cccEEEEEecCCeeEEEeecccCC-CcchhhcccCCCCCC
Q 042486 362 GSVYRGKIG-GDFVAIKKVYGD--ASDQIKLLNKINHSS-LIRLLGICFNGGNWYLVYENAVNG-SLSVWINDKGGKFLD 436 (635)
Q Consensus 362 g~Vy~g~~~-~~~vavK~~~~~--~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~l~ 436 (635)
+++||.+-. .+....+.+... ..-++++|.+++||| .++.++-+..+...+++++++.++ +-..-.... ...+.
T Consensus 256 tknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~s-e~~~~ 334 (829)
T KOG0576|consen 256 TKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVS-EIALE 334 (829)
T ss_pred cCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccccCChh-hHhhh
Confidence 677777763 233335555443 345899999999999 777777776777789999999877 222222111 11144
Q ss_pred HHHHHHHHHHHHhhhcccccCCCCCeEeecccCCCEEECCCCcEEEeeecCcccccccCCceeeecccccCCCccCcccc
Q 042486 437 WAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCSNVLLDTDFRAKIANFALARPAERQEGEFALTSHIVGTKGYMAPEYL 516 (635)
Q Consensus 437 ~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 516 (635)
..+...+...-.+++++||+.. -+|+| ||+..+ +..+..||+......... ..+...+++.++|||+.
T Consensus 335 ~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~----~~~t~~~~~~~~~pev~ 402 (829)
T KOG0576|consen 335 QYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM----KPRTAIGTPEPLAPEVI 402 (829)
T ss_pred hhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc----ccccCCCCCCCCCchhh
Confidence 4555667777889999999843 48888 777654 688999999887655432 34456799999999999
Q ss_pred ccCCCCcccchhhHHHHHHHHHhCCCCC
Q 042486 517 ENGLVSTKLDVYAFGVLMLEMLSGKEAP 544 (635)
Q Consensus 517 ~~~~~s~ksDV~SlGvvl~elltG~~p~ 544 (635)
..+.+..+-|+|++|+--.++--|-+|.
T Consensus 403 ~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 403 QENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred cccccccCCCccCCCcchhhcCCCCCCC
Confidence 9999999999999998777777776653
No 488
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.47 E-value=0.00063 Score=67.01 Aligned_cols=128 Identities=20% Similarity=0.149 Sum_probs=73.8
Q ss_pred ceEEEeeeCCcEEEEEEeccC-----hHHHHHHHhhhccCC--cccEEEEEec---CCeeEEEeecccCCCcch------
Q 042486 362 GSVYRGKIGGDFVAIKKVYGD-----ASDQIKLLNKINHSS--LIRLLGICFN---GGNWYLVYENAVNGSLSV------ 425 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~~-----~~~E~~~l~~l~h~n--Iv~l~~~~~~---~~~~~lV~E~~~~gsL~~------ 425 (635)
+.||+...+++.+++|..... +.+|..+++.+.... +.+++..... ....+++|+++++..+..
T Consensus 11 n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 90 (239)
T PF01636_consen 11 NRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDDELSPEQ 90 (239)
T ss_dssp SEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHHTSTHHH
T ss_pred eeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccccccccc
Confidence 689999997789999998654 557888888886443 5677765543 234689999999987777
Q ss_pred ----------hh---ccc--CCCCCCHHH---------HHHH------------HHHHHh-hhccccc----CCCCCeEe
Q 042486 426 ----------WI---NDK--GGKFLDWAQ---------RIQI------------ALDVAT-GLNYLHS----FTNPPHVH 464 (635)
Q Consensus 426 ----------~l---~~~--~~~~l~~~~---------~~~i------------~~~ia~-aL~~LH~----~~~~~ivH 464 (635)
.+ +.. ......+.. .... ...+.. .+..+++ .....++|
T Consensus 91 ~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 170 (239)
T PF01636_consen 91 RPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLPKPLPPVLIH 170 (239)
T ss_dssp HHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCSCEEEE-
T ss_pred cccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhccCCCcEEEE
Confidence 11 111 101111100 0000 011111 2223322 12355999
Q ss_pred ecccCCCEEEC-CCCcEEEeeecCcc
Q 042486 465 KDIKCSNVLLD-TDFRAKIANFALAR 489 (635)
Q Consensus 465 ~Dikp~NIll~-~~~~~kl~Dfg~a~ 489 (635)
+|+.+.||+++ +++.+-|+||+.+.
T Consensus 171 gD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 171 GDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred eccccccceeeeccceeEEEecccce
Confidence 99999999999 66777899998764
No 489
>COG1388 LytE FOG: LysM repeat [Cell envelope biogenesis, outer membrane]
Probab=97.41 E-value=0.00018 Score=63.88 Aligned_cols=49 Identities=18% Similarity=0.333 Sum_probs=44.7
Q ss_pred eeeeeecCCCCCCHHHHHHHhCCChHhHhhhcCCCCCcccCCCcEEEEeec
Q 042486 58 AFLIFRSKPPFNTVASISTLLASKPSQLSKINSVSETATFETNQMVIVPVN 108 (635)
Q Consensus 58 ~~~~y~~~~~g~tl~~Ia~~~~~~~~~i~~~N~~~~~~~~~~gq~l~ip~~ 108 (635)
.+.+|+|++ ||||+.||+.|++++.+|+++|.+.+. .+.+||.|.+|..
T Consensus 65 ~~~~~~V~~-gdtL~~Ia~~~~~tv~~l~~~n~l~~~-~i~~gq~l~~~~~ 113 (124)
T COG1388 65 PVVTYTVKK-GDTLSKIARKYGVTVAELKQLNNLSSD-KIKVGQKLKLPVS 113 (124)
T ss_pred CCceEEEec-CCCHHHHHHHhCCCHHHHHHHhccCCC-ceecCcEEEEecc
Confidence 457899999 999999999999999999999999655 9999999999973
No 490
>PLN02876 acyl-CoA dehydrogenase
Probab=97.25 E-value=0.0026 Score=75.02 Aligned_cols=62 Identities=11% Similarity=0.298 Sum_probs=44.0
Q ss_pred ceEEEeeeCC----cEEEEEEec--------cChHHHHHHHhhhc-cCCc--ccEEEEEecC---CeeEEEeecccCCCc
Q 042486 362 GSVYRGKIGG----DFVAIKKVY--------GDASDQIKLLNKIN-HSSL--IRLLGICFNG---GNWYLVYENAVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~~~----~~vavK~~~--------~~~~~E~~~l~~l~-h~nI--v~l~~~~~~~---~~~~lV~E~~~~gsL 423 (635)
+.+|+-...+ ..+++|+.. ..+.+|.++|+.+. |.++ .+++.+|.+. +..|+||||++|..+
T Consensus 52 n~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~ 131 (822)
T PLN02876 52 NPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIF 131 (822)
T ss_pred CceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCccc
Confidence 4677666533 356677652 24678999999995 6665 7888888764 457899999988654
No 491
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.23 E-value=0.00055 Score=79.34 Aligned_cols=195 Identities=18% Similarity=0.208 Sum_probs=131.6
Q ss_pred HHHHHHhhhccCCcccEEEEEecCCee----EEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCC
Q 042486 385 DQIKLLNKINHSSLIRLLGICFNGGNW----YLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNP 460 (635)
Q Consensus 385 ~E~~~l~~l~h~nIv~l~~~~~~~~~~----~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~ 460 (635)
-|+..+.++.|+|++.++.|....... .+..|++...++...+..... .+....+.+..++.+||.|+|+..
T Consensus 231 ~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~--i~~~~~r~~~~~~~~GL~~~h~~~-- 306 (1351)
T KOG1035|consen 231 IELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGS--IPLETLRILHQKLLEGLAYLHSLS-- 306 (1351)
T ss_pred HHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccc--cCHHHHHHHHHHHhhhHHHHHHhc--
Confidence 467778889999999999988754332 344567777777777755433 677888888999999999999853
Q ss_pred CeEeecccCC---CEEECCCCcEEEe--eecCcccccccCCceeeecccccCCCccCccccccCCCCc--ccchhhHHHH
Q 042486 461 PHVHKDIKCS---NVLLDTDFRAKIA--NFALARPAERQEGEFALTSHIVGTKGYMAPEYLENGLVST--KLDVYAFGVL 533 (635)
Q Consensus 461 ~ivH~Dikp~---NIll~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~--ksDV~SlGvv 533 (635)
..|.-+..+ +--.+.++...++ ||+........... ........+.++|......... ..|+|.+|..
T Consensus 307 -l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~----~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll 381 (1351)
T KOG1035|consen 307 -LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS----FSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLL 381 (1351)
T ss_pred -cceeEEecccccccccCccceeecchhhhcccccCCCcccc----hhhcCccccccccccccccchhhhhhHHHHHHHH
Confidence 555544444 3444566667766 88887765543322 1123445677888776655444 4799999999
Q ss_pred HHHHHhCCCCCCCCcchhhHHHHhhhcccccCCchhhhhhhcCCcCCCCCChHHHHHHHHHHHHhhhcCCCCCCCHHHHH
Q 042486 534 MLEMLSGKEAPALYSEENMLLVDVLNPVLHKEDGEESLRHLMDPSMQGNYPPVTAILVIRLIESCLKKDPSGRPAMDKIA 613 (635)
Q Consensus 534 l~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 613 (635)
...+..|..+.... .....+++.. .. ..+.+....|+..++++|+++.+++
T Consensus 382 ~~~~~~~~~i~~~~---------------------~~~~~~l~~~----~~----~~~~d~~~~~~~~~~~~Rl~~~~ll 432 (1351)
T KOG1035|consen 382 LLQLSQGEDISEKS---------------------AVPVSLLDVL----ST----SELLDALPKCLDEDSEERLSALELL 432 (1351)
T ss_pred HhhhhhcCcccccc---------------------cchhhhhccc----cc----hhhhhhhhhhcchhhhhccchhhhh
Confidence 99999987553210 1111111111 00 1367788899999999999999999
Q ss_pred HHHH
Q 042486 614 QSIS 617 (635)
Q Consensus 614 ~~L~ 617 (635)
.+..
T Consensus 433 ~~~f 436 (1351)
T KOG1035|consen 433 THPF 436 (1351)
T ss_pred hchh
Confidence 8754
No 492
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.11 E-value=0.004 Score=62.74 Aligned_cols=123 Identities=13% Similarity=0.125 Sum_probs=72.4
Q ss_pred ceEEEeeeCCcEEEEEEecc-------ChHHHHHHHhhhccCCc-ccEEEEEecCCeeEEEeecccCCCcchh-------
Q 042486 362 GSVYRGKIGGDFVAIKKVYG-------DASDQIKLLNKINHSSL-IRLLGICFNGGNWYLVYENAVNGSLSVW------- 426 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~-------~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lV~E~~~~gsL~~~------- 426 (635)
+.+|+...++..+++|.... +..+|.++++.+....+ .++++... -++||||++|..+...
T Consensus 10 n~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~~~~~~~~~ 85 (256)
T TIGR02721 10 NRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITLDQFVALDL 85 (256)
T ss_pred CCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccccccccCchh
Confidence 67888887777888886432 34679999999965444 44554432 3689999998766432
Q ss_pred ----------hcccC--CCCCCHHHH-HHHHH------------HHHhhhcccc--cCCCCCeEeecccCCCEEECCCCc
Q 042486 427 ----------INDKG--GKFLDWAQR-IQIAL------------DVATGLNYLH--SFTNPPHVHKDIKCSNVLLDTDFR 479 (635)
Q Consensus 427 ----------l~~~~--~~~l~~~~~-~~i~~------------~ia~aL~~LH--~~~~~~ivH~Dikp~NIll~~~~~ 479 (635)
++... ...++...+ ..... ++...+.... ......++|+|+.|.||++++++
T Consensus 86 ~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~~- 164 (256)
T TIGR02721 86 LLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQG- 164 (256)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCCC-
Confidence 11111 111222211 11111 1111111110 00124589999999999999876
Q ss_pred EEEeeecCcc
Q 042486 480 AKIANFALAR 489 (635)
Q Consensus 480 ~kl~Dfg~a~ 489 (635)
+.|+||+.+.
T Consensus 165 ~~lIDwE~a~ 174 (256)
T TIGR02721 165 LKLIDWEYAS 174 (256)
T ss_pred CEEEeccccC
Confidence 7899999875
No 493
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.11 E-value=0.0066 Score=60.21 Aligned_cols=59 Identities=15% Similarity=0.171 Sum_probs=39.7
Q ss_pred ceEEEeeeC---CcEEEEEEecc------ChHHHHHHHhhhccCCc-ccEEEEEecCCeeEEEeecccCCCcc
Q 042486 362 GSVYRGKIG---GDFVAIKKVYG------DASDQIKLLNKINHSSL-IRLLGICFNGGNWYLVYENAVNGSLS 424 (635)
Q Consensus 362 g~Vy~g~~~---~~~vavK~~~~------~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lV~E~~~~gsL~ 424 (635)
..+|+.... +..+++|.... +..+|+.+++.+....+ .++++.+. ..++|||++|.++.
T Consensus 12 N~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~l~ 80 (235)
T cd05157 12 NKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRTLE 80 (235)
T ss_pred ceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCcCC
Confidence 578888764 46788886643 23479999999854444 44544332 24899999987764
No 494
>PRK10593 hypothetical protein; Provisional
Probab=97.05 E-value=0.0068 Score=62.55 Aligned_cols=62 Identities=11% Similarity=0.004 Sum_probs=45.8
Q ss_pred ceEEEeeeCCcEEEEEEecc-----ChHHHHHHHhhhcc---CCcccEEEEEecC---CeeEEEeecccCCCc
Q 042486 362 GSVYRGKIGGDFVAIKKVYG-----DASDQIKLLNKINH---SSLIRLLGICFNG---GNWYLVYENAVNGSL 423 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~-----~~~~E~~~l~~l~h---~nIv~l~~~~~~~---~~~~lV~E~~~~gsL 423 (635)
+.||+-...+..+.+|..+. .+..|.+.|+.+.. -.+.+++++|..+ +..+||||+++++++
T Consensus 28 ~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 28 AALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred eeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 67888876544566666543 35789999998853 3688899888643 668999999998765
No 495
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.02 E-value=0.0028 Score=63.04 Aligned_cols=30 Identities=20% Similarity=0.339 Sum_probs=25.9
Q ss_pred CCeEeecccCCCEEECCCCcEEEeeecCcc
Q 042486 460 PPHVHKDIKCSNVLLDTDFRAKIANFALAR 489 (635)
Q Consensus 460 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 489 (635)
..++|+|+.+.||+++++...-|+||+.+.
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 458999999999999877666799999875
No 496
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=96.85 E-value=0.0061 Score=56.60 Aligned_cols=113 Identities=19% Similarity=0.097 Sum_probs=76.9
Q ss_pred ceEEEeeeCCcEEEEEEeccC-----hHHHHHHHhhhccCCccc-EEEEEecCCeeEEEeecccCCCcchhhcccCCCCC
Q 042486 362 GSVYRGKIGGDFVAIKKVYGD-----ASDQIKLLNKINHSSLIR-LLGICFNGGNWYLVYENAVNGSLSVWINDKGGKFL 435 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~~-----~~~E~~~l~~l~h~nIv~-l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l 435 (635)
|.||.|.+.|..+|+|+-+.+ +..|.++|..++-.++-+ ++.|-. -++.|||..|-.|.++-...
T Consensus 36 s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~L~~~~~~~----- 106 (201)
T COG2112 36 SVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRPLGKLEIGG----- 106 (201)
T ss_pred cEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcchhhhhhcc-----
Confidence 789999999999999988765 567999999998776654 444432 24559999998887776431
Q ss_pred CHHHHHHHHHHHHhhhcccccCCCCCeEeeccc-CCCEEECCCCcEEEeeecCccc
Q 042486 436 DWAQRIQIALDVATGLNYLHSFTNPPHVHKDIK-CSNVLLDTDFRAKIANFALARP 490 (635)
Q Consensus 436 ~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dik-p~NIll~~~~~~kl~Dfg~a~~ 490 (635)
+.+... .+++.---|.. .+|-|+.|. |..++|-.+..+.|+||..|+.
T Consensus 107 ~rk~l~----~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 107 DRKHLL----RVLEKAYKLDR---LGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred cHHHHH----HHHHHHHHHHH---hccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 223333 33333222333 348888876 4444554555999999998874
No 497
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=96.68 E-value=0.016 Score=55.71 Aligned_cols=94 Identities=18% Similarity=0.262 Sum_probs=64.7
Q ss_pred HHHHHHHhhhc------cCCcccEEEEEecCCeeEEEeecccC--C----CcchhhcccCCCCCCHHHHHHHHHHHHhhh
Q 042486 384 SDQIKLLNKIN------HSSLIRLLGICFNGGNWYLVYENAVN--G----SLSVWINDKGGKFLDWAQRIQIALDVATGL 451 (635)
Q Consensus 384 ~~E~~~l~~l~------h~nIv~l~~~~~~~~~~~lV~E~~~~--g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL 451 (635)
.+|+.-..++. +.+|.+++|+...+.-..+|+|...+ | +|.+++.... ++. ...+.+.++.+
T Consensus 59 ~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~---~~~-~~~~~L~~f~~-- 132 (199)
T PF10707_consen 59 RRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG---LTE-ELRQALDEFKR-- 132 (199)
T ss_pred HHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC---ccH-HHHHHHHHHHH--
Confidence 45766666655 78999999999988888999998754 2 5777774432 555 44444555544
Q ss_pred cccccCCCCCeEeecccCCCEEECCC---C-cEEEee-ecC
Q 042486 452 NYLHSFTNPPHVHKDIKCSNVLLDTD---F-RAKIAN-FAL 487 (635)
Q Consensus 452 ~~LH~~~~~~ivH~Dikp~NIll~~~---~-~~kl~D-fg~ 487 (635)
||-+.+ |+.+|++|.||++..+ . .+.|+| ||.
T Consensus 133 -~l~~~~---Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~ 169 (199)
T PF10707_consen 133 -YLLDHH---IVIRDLNPHNIVVQRRDSGEFRLVLIDGLGE 169 (199)
T ss_pred -HHHHcC---CeecCCCcccEEEEecCCCceEEEEEeCCCC
Confidence 444433 9999999999999432 2 577877 443
No 498
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.66 E-value=0.021 Score=58.80 Aligned_cols=128 Identities=16% Similarity=0.112 Sum_probs=75.8
Q ss_pred ceEEEeeeCCcEEEEEEecc----ChHHHHHHHhhhccCC--cccEEEE------EecCCeeEEEeecccCCCcchh---
Q 042486 362 GSVYRGKIGGDFVAIKKVYG----DASDQIKLLNKINHSS--LIRLLGI------CFNGGNWYLVYENAVNGSLSVW--- 426 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~----~~~~E~~~l~~l~h~n--Iv~l~~~------~~~~~~~~lV~E~~~~gsL~~~--- 426 (635)
..+|+...++..+++|.... +...|++++..+.+.. +.+++.. ...++..++|++|++|..+...
T Consensus 28 n~~y~v~~~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~~ 107 (296)
T cd05153 28 NTNYFVTTDSGRYVLTLFEKVSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFLAGEHLTRPTAA 107 (296)
T ss_pred cceEEEEeCCCcEEEEEcCCCChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeCCCCCCCCCCHH
Confidence 46898877777888898753 2446888888885443 4444432 1234456899999998776430
Q ss_pred --------h---ccc----CC-----CCCCHHHHHH----------HHHHHHhhhccccc----CCCCCeEeecccCCCE
Q 042486 427 --------I---NDK----GG-----KFLDWAQRIQ----------IALDVATGLNYLHS----FTNPPHVHKDIKCSNV 472 (635)
Q Consensus 427 --------l---~~~----~~-----~~l~~~~~~~----------i~~~ia~aL~~LH~----~~~~~ivH~Dikp~NI 472 (635)
+ +.. .. ....|..... ....+..++.++.+ .....++|+|+.|.||
T Consensus 108 ~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Ni 187 (296)
T cd05153 108 HCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRGVIHADLFRDNV 187 (296)
T ss_pred HHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCcCCccCcCcccE
Confidence 0 100 00 0112221110 01112223333332 1124699999999999
Q ss_pred EECCCCcEEEeeecCcc
Q 042486 473 LLDTDFRAKIANFALAR 489 (635)
Q Consensus 473 ll~~~~~~kl~Dfg~a~ 489 (635)
+++++....|+||+.+.
T Consensus 188 l~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 188 LFDGDELSGVIDFYFAC 204 (296)
T ss_pred EEeCCceEEEeehhhhc
Confidence 99988778899999875
No 499
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.43 E-value=0.027 Score=58.18 Aligned_cols=60 Identities=18% Similarity=0.239 Sum_probs=40.2
Q ss_pred ceEEEeeeC--------CcEEEEEEecc------ChHHHHHHHhhhccCCc-ccEEEEEecCCeeEEEeecccCCCcch
Q 042486 362 GSVYRGKIG--------GDFVAIKKVYG------DASDQIKLLNKINHSSL-IRLLGICFNGGNWYLVYENAVNGSLSV 425 (635)
Q Consensus 362 g~Vy~g~~~--------~~~vavK~~~~------~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lV~E~~~~gsL~~ 425 (635)
..+|+.... ++.+++|.... +..+|.++++.+....+ .++++++.+ .+|+||++|..+..
T Consensus 12 N~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i~G~~l~~ 86 (302)
T cd05156 12 NAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFIPSRTLTT 86 (302)
T ss_pred ceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC----CchhheeCCCcCCH
Confidence 467777663 46788887654 34678889998864444 456665532 36899999877653
No 500
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=96.34 E-value=0.023 Score=54.38 Aligned_cols=104 Identities=18% Similarity=0.238 Sum_probs=71.7
Q ss_pred ceEEEeeeCCcEEEEEEecc----------------------------ChHHHHHHHhhh---ccCCc--ccEEEEEecC
Q 042486 362 GSVYRGKIGGDFVAIKKVYG----------------------------DASDQIKLLNKI---NHSSL--IRLLGICFNG 408 (635)
Q Consensus 362 g~Vy~g~~~~~~vavK~~~~----------------------------~~~~E~~~l~~l---~h~nI--v~l~~~~~~~ 408 (635)
|.|||.+++|+.+|+|.++. .|..|.+...+| .+.++ ++++||..-.
T Consensus 52 ~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~ 131 (207)
T PF13095_consen 52 GYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGREGLWAVKCHGYLLLT 131 (207)
T ss_pred eEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccccCceEEEeeEEEEEc
Confidence 78999999999999998321 133566665555 45566 9999998522
Q ss_pred ------------------CeeEEEeecccCCCcchhhcccCCCCCCHHHHHHHHHHHHhhhcccccCCCCCeEeecccCC
Q 042486 409 ------------------GNWYLVYENAVNGSLSVWINDKGGKFLDWAQRIQIALDVATGLNYLHSFTNPPHVHKDIKCS 470 (635)
Q Consensus 409 ------------------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~ 470 (635)
-.+.||.||.+... .+.... +.+|.+-|..+|..+ |+-+|+++.
T Consensus 132 ~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~~~----~~~~~~dl~~~~k~g---I~~~Dv~~~ 193 (207)
T PF13095_consen 132 EDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQIRD----IPQMLRDLKILHKLG---IVPRDVKPR 193 (207)
T ss_pred hHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccchhH----HHHHHHHHHHHHHCC---eeeccCccc
Confidence 01356777665432 133333 345556667799866 999999999
Q ss_pred CEEECCCCcEEEeeecCc
Q 042486 471 NVLLDTDFRAKIANFALA 488 (635)
Q Consensus 471 NIll~~~~~~kl~Dfg~a 488 (635)
|.. .-||+|||.+
T Consensus 194 ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 194 NYR-----GGKLVDFSSS 206 (207)
T ss_pred ccc-----CCEEEecccC
Confidence 986 5689999864
Done!