BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 042491
         (266 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
           Acid 35-O-Methyltransferase In Complex With 5-
           Hydroxyconiferaldehyde
 pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
           Acid 35-O-Methyltransferase In Complex With 5-
           Hydroxyconiferaldehyde
 pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
           Acid 35-O-Methyltransferase In Complex With 5-
           Hydroxyconiferaldehyde
 pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
           Acid 35-O-Methyltransferase Ferulic Acid Complex
 pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
           Acid 35-O-Methyltransferase Ferulic Acid Complex
 pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
           Acid 35-O-Methyltransferase Ferulic Acid Complex
          Length = 365

 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/249 (38%), Positives = 143/249 (57%), Gaps = 14/249 (5%)

Query: 19  QLMFAFADSMALKSAVELRLADIMHCHG-----SPITLPQLASGINSSCPDVHIIPSLTR 73
           QL  A    M LKSA+EL L +I+   G     SPI   ++AS + ++ PD  ++  L R
Sbjct: 25  QLASASVLPMILKSALELDLLEIIAKAGPGAQISPI---EIASQLPTTNPDAPVM--LDR 79

Query: 74  IMRMLVRKGVF--AAHRSSDGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAP 130
           ++R+L    +   +     DG  + +YGL  ++K+L+++ + +S++ + L    ++L   
Sbjct: 80  MLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMES 139

Query: 131 CHHLSQCVEEGGHAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGF 190
            +HL   V +GG  F KA+G   +++            K M+  + I M  +L  Y  GF
Sbjct: 140 WYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYT-GF 198

Query: 191 DGIRSLVDVGGGTGEELAEIVEFYPHIKGVNFDLPHVVATAPVYEGVSHVGGDMLNAVPN 250
           +G++SLVDVGGGTG  +  IV  YP IKG+NFDLPHV+  AP Y GV HVGGDM  ++P 
Sbjct: 199 EGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPK 258

Query: 251 ADAVFMKVI 259
           ADAVFMK I
Sbjct: 259 ADAVFMKWI 267


>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
 pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
 pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
 pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
 pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
 pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
 pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
 pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
          Length = 368

 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 139/247 (56%), Gaps = 9/247 (3%)

Query: 19  QLMFAFADSMALKSAVELRLADIMHCHGSP---ITLPQLASGINSSCPDVHIIPSLTRIM 75
           QL  A    MALK+A+EL + +IM     P   I+  ++A+ + ++ P+  ++  L R++
Sbjct: 27  QLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVM--LDRVL 84

Query: 76  RMLVRKGV--FAAHRSSDGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPCH 132
           R+L    V  +       G  E +YGL  + K+L ++ + +SLAP +L    ++L  P  
Sbjct: 85  RLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWF 144

Query: 133 HLSQCVEEGGHAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDG 192
           +L   + EGG  F KA+G  ++D+            K M+  + I M  +L  Y +GF+G
Sbjct: 145 YLKDAILEGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMY-NGFEG 203

Query: 193 IRSLVDVGGGTGEELAEIVEFYPHIKGVNFDLPHVVATAPVYEGVSHVGGDMLNAVPNAD 252
           + ++VDVGGGTG   + IV  YP I  +NFDLPHV+  AP + GV H+GGDM + VP  D
Sbjct: 204 LTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGD 263

Query: 253 AVFMKVI 259
           A+F+K I
Sbjct: 264 AIFIKWI 270


>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
           O-Methyltransferase
          Length = 352

 Score =  143 bits (361), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 130/253 (51%), Gaps = 9/253 (3%)

Query: 9   DVLRGQAQVWQLMFAFADSMALKSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHII 68
           ++ + QA +++ ++AF DSM+LK AVE+ + +I+  HG PI+L  L S +         I
Sbjct: 12  EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSK---I 68

Query: 69  PSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQ 128
            ++ R+MR L   G F         EE  Y LT  S+ L+R S++ LAPM+       L 
Sbjct: 69  GNVRRLMRYLAHNGFFEIITK----EEESYALTVASELLVRGSDLCLAPMVECVLDPTLS 124

Query: 129 APCHHLSQCV-EEGGHAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYK 187
              H L + + EE    F    G   WDF             AMA  +K++ +  L    
Sbjct: 125 GSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLI-NLALRDCD 183

Query: 188 DGFDGIRSLVDVGGGTGEELAEIVEFYPHIKGVNFDLPHVVATAPVYEGVSHVGGDMLNA 247
             FDG+ S+VDVGGGTG     I E +P +K + FD P VV        +++VGGDM  +
Sbjct: 184 FVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTS 243

Query: 248 VPNADAVFMKVIV 260
           +PNADAV +K I+
Sbjct: 244 IPNADAVLLKYIL 256


>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
           Homolog In Complex With Biochanin A And Sah
 pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
           Homolog In Complex With Biochanin A And Sah
          Length = 357

 Score =  142 bits (358), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 135/254 (53%), Gaps = 6/254 (2%)

Query: 9   DVLRGQAQVWQLMFAFADSMALKSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHII 68
           ++ + QA +++ M+AF DSM+LK ++E+ + +I+H HG PITL  L S +      V   
Sbjct: 12  EIFKAQALLYKNMYAFVDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIPSTKVD-- 69

Query: 69  PSLTRIMRMLVRKGVFAAHRSSD-GSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLL 127
            ++ R+MR L   G F    + +  +EE  Y LT  S+ L++ +E+ LAPM+       L
Sbjct: 70  -NVQRLMRYLAHNGFFEIITNQELENEEEAYALTVASELLVKGTELCLAPMVECVLDPTL 128

Query: 128 QAPCHHLSQCV-EEGGHAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHY 186
               H+L + V EE    F    GC++W+F             A+A  +K++ +  +   
Sbjct: 129 STSFHNLKKWVYEEDLTLFAVNLGCDLWEFLNKNPEYNTLYNDALASDSKMI-NLAMKDC 187

Query: 187 KDGFDGIRSLVDVGGGTGEELAEIVEFYPHIKGVNFDLPHVVATAPVYEGVSHVGGDMLN 246
              F+G+ S+VDVGGG G     I E +P +  V FD P VV        +++VGGDM  
Sbjct: 188 NLVFEGLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFI 247

Query: 247 AVPNADAVFMKVIV 260
           +VP ADAV +K ++
Sbjct: 248 SVPKADAVLLKAVL 261


>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
           Sah
 pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
           With S- Adenosyl-L-Homocysteine And Sinapaldehyde
 pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
           With S- Adenosyl-L-Homocysteine And Sinapaldehyde
 pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
           With S- Adenosyl-L-Homocysteine And Sinapaldehyde
 pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
           With S- Adenosyl-L-Homocysteine And Sinapaldehyde
 pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
           With S- Adenosyl-L-Homocysteine And Coniferaldehyde
 pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
           With S- Adenosyl-L-Homocysteine And Coniferaldehyde
 pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
           With S- Adenosyl-L-Homocysteine And Coniferaldehyde
 pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
           With S- Adenosyl-L-Homocysteine And Coniferaldehyde
          Length = 364

 Score =  139 bits (350), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 124/241 (51%), Gaps = 14/241 (5%)

Query: 28  MALKSAVELRLADIMHCHGSPITLP-----QLASGINSSCPDVHIIPSLTRIMRMLVRKG 82
           M LK+A+EL L +I+   G     P     +L S  N   PD+     + RI+R+L    
Sbjct: 35  MTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDM-----VDRILRLLASYN 89

Query: 83  VFA--AHRSSDGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPCHHLSQCVE 139
           V         DG     YG   + K+L  + + +S+A + L    ++L    ++L   V 
Sbjct: 90  VVTCLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVL 149

Query: 140 EGGHAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDV 199
           +GG  F KA+G   +++            + M   + I+   LL  Y  GF+G+ +LVDV
Sbjct: 150 DGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYH-GFEGLGTLVDV 208

Query: 200 GGGTGEELAEIVEFYPHIKGVNFDLPHVVATAPVYEGVSHVGGDMLNAVPNADAVFMKVI 259
           GGG G  +A I   YP IKGVNFDLPHV++ AP + GV+HVGGDM   VP+ D + MK I
Sbjct: 209 GGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWI 268

Query: 260 V 260
           +
Sbjct: 269 L 269


>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
           Isoflavone O-Methyltransferase
          Length = 352

 Score =  130 bits (326), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 124/253 (49%), Gaps = 9/253 (3%)

Query: 9   DVLRGQAQVWQLMFAFADSMALKSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHII 68
           ++ + QA +++ ++AF DS +LK AVE  + +I+  HG PI+L  L S +         I
Sbjct: 12  EIFKAQALLYKHIYAFIDSXSLKWAVEXNIPNIIQNHGKPISLSNLVSILQVPSSK---I 68

Query: 69  PSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQ 128
            ++ R+ R L   G F         EE  Y LT  S+ L+R S++ LAP +       L 
Sbjct: 69  GNVRRLXRYLAHNGFFEIITK----EEESYALTVASELLVRGSDLCLAPXVECVLDPTLS 124

Query: 129 APCHHLSQCV-EEGGHAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYK 187
              H L + + EE    F    G   WDF             A A  +K++ +  L    
Sbjct: 125 GSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAXASDSKLI-NLALRDCD 183

Query: 188 DGFDGIRSLVDVGGGTGEELAEIVEFYPHIKGVNFDLPHVVATAPVYEGVSHVGGDMLNA 247
             FDG+ S+VDVGGGTG     I E +P +K + FD P VV        +++VGGD   +
Sbjct: 184 FVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDXFTS 243

Query: 248 VPNADAVFMKVIV 260
           +PNADAV +K I+
Sbjct: 244 IPNADAVLLKYIL 256


>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
          Length = 372

 Score =  127 bits (320), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 120/237 (50%), Gaps = 8/237 (3%)

Query: 30  LKSAVELRLADIMHCHGSP---ITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAA 86
           L +A++L L +I+     P   ++  ++AS + +S     +   L R++R+L    V  +
Sbjct: 41  LNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTS 100

Query: 87  HRSS--DGSEETMYGLTQISKWLLRD-SEMSLAPMILFQ-NSQLLQAPCHHLSQCVEEGG 142
              +  DG  E +YGL+ + K+L+ D S   LA    F     LLQ   +     V+E  
Sbjct: 101 TTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDI 160

Query: 143 HAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGG 202
             FK  HG   ++F            K+M       M  +L  Y  GF+GI +LVDVGGG
Sbjct: 161 DLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYT-GFEGISTLVDVGGG 219

Query: 203 TGEELAEIVEFYPHIKGVNFDLPHVVATAPVYEGVSHVGGDMLNAVPNADAVFMKVI 259
           +G  L  I+  YP IKG+NFDLP V+  AP   G+ HVGGDM  +VP  DA+ +K +
Sbjct: 220 SGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAV 276


>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
           Chalcone O- Methyltransferase
          Length = 372

 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 85/171 (49%), Gaps = 3/171 (1%)

Query: 91  DGSEETMYGLTQISKWLLRD-SEMSLAPMILFQ-NSQLLQAPCHHLSQCVEEGGHAFKKA 148
           DG  E +YGL+ + K+L+ D S   LA    F     LLQ   +     V+E    FK  
Sbjct: 107 DGGAERVYGLSXVGKYLVPDESRGYLASFTTFLCYPALLQVWXNFKEAVVDEDIDLFKNV 166

Query: 149 HGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELA 208
           HG   ++F            K+            L  Y  GF+GI +LVDVGGG+G  L 
Sbjct: 167 HGVTKYEFXGKDKKXNQIFNKSXVDVCATEXKRXLEIYT-GFEGISTLVDVGGGSGRNLE 225

Query: 209 EIVEFYPHIKGVNFDLPHVVATAPVYEGVSHVGGDMLNAVPNADAVFMKVI 259
            I+  YP IKG+NFDLP V+  AP   G+ HVGGD   +VP  DA  +K +
Sbjct: 226 LIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDXFASVPQGDAXILKAV 276


>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
           Complexed With (+)-6a-hydroxymaackiain
 pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
           Isoflavanone 4'-O- Methyltransferase
          Length = 357

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 16/262 (6%)

Query: 9   DVLRGQAQVWQLMFAFADSMALKSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHII 68
           ++   Q  +++ ++ F  SMALKSA+EL +AD +H HG P+TL +LAS +      V+I 
Sbjct: 5   ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI- 63

Query: 69  PSLTRIMRMLVRKGVFAA----HRSSDGSEETMYGLTQISKWLLRDSEMSLAPMI---LF 121
             L R +R+L   G FA      +  D  EE  Y LT  SK L+      L+ ++   L 
Sbjct: 64  --LHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALH 121

Query: 122 QNS-QLLQAPCHHLSQCVEEGGHAFKKAHGCEMWDF--AXXXXXXXXXXXKAMACTAKIV 178
            +S  +  +     ++  E+    F+ A G   WDF               AMA  +++ 
Sbjct: 122 PSSLDMWSSSKKWFNEDKEQT--LFECATGESFWDFLNKDSESSTLSMFQDAMASDSRM- 178

Query: 179 MSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFYPHIKGVNFDLPHVVATAPVYEGVS 238
              +L   K  F+G+ SLVDVGGGTG     I E +PH+K   FD P VV      E ++
Sbjct: 179 FKLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLN 238

Query: 239 HVGGDMLNAVPNADAVFMKVIV 260
            VGGDM  ++P+ADAV +K ++
Sbjct: 239 FVGGDMFKSIPSADAVLLKWVL 260


>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
           4'-O-Methyltransferase Complexed With Sah And
           2,7,4'-Trihydroxyisoflavanone
          Length = 358

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 16/262 (6%)

Query: 9   DVLRGQAQVWQLMFAFADSMALKSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHII 68
           ++   Q  +++ ++ F  SMALKSA+EL +AD +H HG P+TL +LAS +      V+I 
Sbjct: 6   ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI- 64

Query: 69  PSLTRIMRMLVRKGVFAA----HRSSDGSEETMYGLTQISKWLLRDSEMSLAPMI---LF 121
             L R +R+L   G FA      +  D  EE  Y LT  SK L+      L+ ++   L 
Sbjct: 65  --LHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALH 122

Query: 122 QNS-QLLQAPCHHLSQCVEEGGHAFKKAHGCEMWDF--AXXXXXXXXXXXKAMACTAKIV 178
            +S  +  +     ++  E+    F+ A G   WDF               AMA  +++ 
Sbjct: 123 PSSLDMWSSSKKWFNEDKEQT--LFECATGESFWDFLNKDSESSTLSMFQDAMASDSRM- 179

Query: 179 MSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFYPHIKGVNFDLPHVVATAPVYEGVS 238
              +L   K  F+G+ SLVDVGGGTG     I E +PH+K   FD P VV      E ++
Sbjct: 180 FKLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLN 239

Query: 239 HVGGDMLNAVPNADAVFMKVIV 260
            VGGDM  ++P+ADAV +K ++
Sbjct: 240 FVGGDMFKSIPSADAVLLKWVL 261


>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
           Complexed With (+)-Pisatin
          Length = 354

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 128/260 (49%), Gaps = 12/260 (4%)

Query: 9   DVLRGQAQVWQLMFAFADSMALKSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHII 68
           ++   Q  +++ ++ F  SMALKSA+EL +AD +H HG P+TL +LAS +      V+I 
Sbjct: 2   ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI- 60

Query: 69  PSLTRIMRMLVRKGVFAA----HRSSDGSEETMYGLTQISKWLLRDSEMSLAPMI--LFQ 122
             L R +R+L   G FA      +  D  EE  Y LT  SK L+      L+ ++     
Sbjct: 61  --LHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALH 118

Query: 123 NSQLLQAPCHHLSQCVEEGGHAFKKAHGCEMWDF--AXXXXXXXXXXXKAMACTAKIVMS 180
            S L            ++    F+ A G   WDF               AMA  +++   
Sbjct: 119 PSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRM-FK 177

Query: 181 TLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFYPHIKGVNFDLPHVVATAPVYEGVSHV 240
            +L   K  F+G+ SLVDVGGGTG     I E +PH+K   FD P VV      E ++ V
Sbjct: 178 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFV 237

Query: 241 GGDMLNAVPNADAVFMKVIV 260
           GGDM  ++P+ADAV +K ++
Sbjct: 238 GGDMFKSIPSADAVLLKWVL 257


>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
 pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
          Length = 334

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 98/239 (41%), Gaps = 34/239 (14%)

Query: 33  AVELRLADIMHCHGSPITLPQ-LASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSD 91
           A  L LAD++    S I   + LA+ + S    +H      R+MR+LV   +F       
Sbjct: 28  ATRLGLADLIE---SGIDSDETLAAAVGSDAERIH------RLMRLLVAFEIF------Q 72

Query: 92  GSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPCHHLSQCVEEGGHAFKKAHGC 151
           G     Y  T  S  LLRD E S   M+LF   +   A      + +  G   F+ A G 
Sbjct: 73  GDTRDGYANTPTSH-LLRDVEGSFRDMVLFYGEEF-HAAWTPACEALLSGTPGFELAFGE 130

Query: 152 EMWDFAXXXXXXXXXXXKAMACT--AKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAE 209
           + + +             AM  +  A   +  LL      F G RS VDVGGG+GE    
Sbjct: 131 DFYSYLKRCPDAGRRFLLAMKASNLAFHEIPRLLD-----FRG-RSFVDVGGGSGELTKA 184

Query: 210 IVEFYPHIKGVNFDLPHVVATAP-------VYEGVSHVGGDMLNAVP-NADAVFMKVIV 260
           I++  P  +GV  D    +  A          E VS VGGDML  VP N D   +  I+
Sbjct: 185 ILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRII 243


>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
 pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
 pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
 pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
 pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
           Bound Mitomycin A
 pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
           Bound Mitomycin A
 pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
           Bound Mitomycin A
 pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
           Bound Mitomycin A
          Length = 369

 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 14/182 (7%)

Query: 82  GVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPCHHLSQCVEEG 141
           GVF      D   + ++    +S  LL D    +A    FQ +         L+  V  G
Sbjct: 99  GVF-----DDLGHDDLFAQNALSAVLLPDPASPVATDARFQAAPWHWRAWEQLTHSVRTG 153

Query: 142 GHAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGG 201
             +F  A+G   W              +A    +      + + Y   F G  + VD+GG
Sbjct: 154 EASFDVANGTSFWQLTHEDPKARELFNRAXGSVSLTEAGQVAAAYD--FSGAATAVDIGG 211

Query: 202 GTGEELAEIVEFYPHIKGVNFDLPHVVATAP---VYEGVSH----VGGDMLNAVPNADAV 254
           G G   A +++ +P ++G   + P V   A       G++     + GD    +P+   V
Sbjct: 212 GRGSLXAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADV 271

Query: 255 FM 256
           ++
Sbjct: 272 YL 273


>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
           In Complex With S-Adensyl-L-Methionine (Sam)
 pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
           In Complex With S-Adensyl-L-Homocystein (Sah)
          Length = 374

 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 90/250 (36%), Gaps = 37/250 (14%)

Query: 28  MALKSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVF-AA 86
           MAL+ A  LRL D  H      TL  LA        D H   +L+R++R L   GV    
Sbjct: 31  MALRVAATLRLVD--HLLAGADTLAGLADRT-----DTHP-QALSRLVRHLTVVGVLEGG 82

Query: 87  HRSSDGSEETMYGL-------TQISKWLLRDSEMSLAPMILFQNSQLLQAPCHHLSQCVE 139
            +       T  G+        Q   WL  +  +S A +               L   V 
Sbjct: 83  EKQGRPLRPTRLGMLLADGHPAQQRAWLDLNGAVSHADLAF-----------TGLLDVVR 131

Query: 140 EGGHAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDV 199
            G  A+   +G   W+               M+C   +        Y   +  +R ++DV
Sbjct: 132 TGRPAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD--WSAVRHVLDV 189

Query: 200 GGGTGEELAEIVEFYPHIKGVNFDLP-------HVVATAPVYEGVSHVGGDMLNAVP-NA 251
           GGG G  LA I    PH++G   +L           A A + + V+   GD    +P  A
Sbjct: 190 GGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTA 249

Query: 252 DAVFMKVIVL 261
           D V +  ++L
Sbjct: 250 DVVLLSFVLL 259


>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
           C Biosynthesis
 pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
           S-Adenosyl-L-Methionine
 pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
           S-Adenosyl-L-Homocysteine
 pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
           S-Adenosyl-L-Homocysteine And Zn2+
 pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
           S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
          Length = 359

 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 49/272 (18%)

Query: 1   MESADVREDVLRGQAQVWQLMFAFADSMALKSAVELRLADIMHCHGSPITLPQLASGINS 60
           M + D+     R    V++ +  F+    +K+A+EL L    H    P  L  LA+   S
Sbjct: 22  MSNNDLLNYYHRANELVFKGLIEFS---CMKAAIELDL--FSHMAEGPKDLATLAADTGS 76

Query: 61  SCPDVHIIPSLTRIMRML-VRKGV-----FAAHRSSDGSEETMYGLTQISK---WLLRDS 111
             P + ++    R MR++ +  G      FA +  S   +E     T ++K   +L  D 
Sbjct: 77  VPPRLEMLLETLRQMRVINLEDGKWSLTEFADYMFSPTPKEPNLHQTPVAKAMAFLADDF 136

Query: 112 EMSLAPMILFQNSQLLQAPCHHLSQCVEEGGHAFKKAHGCEMWDFAXXXXXXXXXXXKAM 171
            M L+  +  Q +   Q P   +++   E    F++ H                      
Sbjct: 137 YMGLSQAVRGQKNFKGQVPYPPVTR---EDNLYFEEIH---------------------- 171

Query: 172 ACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFYPHIKGVNFDLPHVV--- 228
              AK  +  LL   K   DG++ ++DVGGG G+  A +++ +P +     +LP  +   
Sbjct: 172 RSNAKFAIQLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLV 229

Query: 229 ----ATAPVYEGVSHVGGDMLN-AVPNADAVF 255
               A   V + +  +  D+   + P ADAV 
Sbjct: 230 NENAAEKGVADRMRGIAVDIYKESYPEADAVL 261


>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
           Calicheamicin Biosynthesis, Sah Bound Form
 pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
           Calicheamicin Biosynthesis, Sah Bound Form
          Length = 348

 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 71  LTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAP 130
           L R++R+L  + V    R SDG     + LT     L  DS +     IL          
Sbjct: 72  LRRVLRLLAVRDVV---RESDG----RFALTDKGAALRSDSPVPARAGILXFTDTXFWTX 124

Query: 131 CHHLSQCVEEGGHAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGF 190
            H ++  +     AF    G  +  +            +    T       +L+   D F
Sbjct: 125 SHRVASALGPERPAFADIFGSSLDAYFDGDAEVEALYYEGXE-TVSAAEHLILARAGD-F 182

Query: 191 DGIRSLVDVGGGTGEELAEIVEFYPHIKGVNFDLPHVVAT----APVYEGV-SHVGGDML 245
               ++ DVGGG G  L  ++  +P ++GV  D   VVA     AP   G    V GD L
Sbjct: 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFL 242

Query: 246 NAVPNADAVFMKVIV 260
             VP+AD   +K I+
Sbjct: 243 REVPHADVHVLKRIL 257


>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
           Methyltransferase (Asmt) In Complex With Sam
 pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
           Methyltransferase (Asmt) In Complex With Sam And
           N-Acetylserotonin
          Length = 353

 Score = 35.4 bits (80), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 196 LVDVGGGTGEELAEIVEFYPHIKGVNFDLPHVVATAPVY------EGVSHVGGDML-NAV 248
           + D+GGG G    E +  YP  K   FD+P VV TA  +      E +    GD   + +
Sbjct: 183 MCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL 242

Query: 249 PNADAVFMKVIV 260
           P AD   +  ++
Sbjct: 243 PEADLYILARVL 254


>pdb|3MCZ|A Chain A, The Structure Of An O-Methyltransferase Family Protein
           From Burkholderia Thailandensis.
 pdb|3MCZ|B Chain B, The Structure Of An O-Methyltransferase Family Protein
           From Burkholderia Thailandensis
          Length = 352

 Score = 32.7 bits (73), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 23/36 (63%)

Query: 190 FDGIRSLVDVGGGTGEELAEIVEFYPHIKGVNFDLP 225
           F   R+++D+ GG G  LA+++  +P + G  +DLP
Sbjct: 177 FARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLP 212


>pdb|1LML|A Chain A, Leishmanolysin
          Length = 478

 Score = 30.4 bits (67), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 206 ELAEIVEFYPHIKGVNFDLPHVVATAPVYEGVSHVGGDML 245
           E A IV   P+++G NFD+P + ++  V +     G D L
Sbjct: 179 EDARIVANVPNVRGKNFDVPVINSSTAVAKAREQYGCDTL 218


>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
           Neocarzinostatin Biosynthesis In Complex With
           S-Adenosyl-L- Homocysteine (Sah)
 pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
           Neocarzinostatin Biosynthesis In Complex With
           S-Adenosyl-L- Homocysteine (Sah)
 pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
           Neocarzinostatin Biosynthesis In Complex With
           S-Adenosyl-L- Homocysteine (Sah) And
           2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
 pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
           Neocarzinostatin Biosynthesis In Complex With
           S-Adenosyl-L- Homocysteine (Sah) And
           2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
 pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
           Neocarzinostatin Biosynthesis In Complex With
           S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
           Naphthoic Acid (Mna)
 pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
           Neocarzinostatin Biosynthesis In Complex With
           S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
           Naphthoic Acid (Mna)
 pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
           Neocarzinostatin Biosynthesis In Complex With
           S-Adenosyl-L- Homocysteine (Sah) And
           1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
 pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
           Neocarzinostatin Biosynthesis In Complex With
           S-Adenosyl-L- Homocysteine (Sah) And
           1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
          Length = 332

 Score = 29.6 bits (65), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 17/134 (12%)

Query: 24  FADSMALKSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGV 83
            A  MA++ A  LR+AD  H      T  ++AS   +         SL R++R LV  G+
Sbjct: 16  LATPMAVRVAATLRVAD--HIAAGHRTAAEIASAAGAHA------DSLDRLLRHLVAVGL 67

Query: 84  FAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPCH--HLSQCVEEG 141
           F    + DG  + +YGLT+  +  LRD   +     L  NS + +       L+  +  G
Sbjct: 68  F----TRDG--QGVYGLTEFGEQ-LRDDHAAGKRKWLDMNSAVGRGDLGFVELAHSIRTG 120

Query: 142 GHAFKKAHGCEMWD 155
             A+   +G   W+
Sbjct: 121 QPAYPVRYGTSFWE 134


>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
           (Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
           And 4-Methoxy-E-Rhodomycin T (M-Et)
 pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
           (Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
           And 4-Methoxy-E-Rhodomycin T (M-Et)
 pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
           (dnrk) In Complex With S-adenosyl-l-homocystein (sah)
           And 4-methoxy-e-rhodomycin T (m-et)
 pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
           (dnrk) In Complex With S-adenosyl-l-homocystein (sah)
           And 4-methoxy-e-rhodomycin T (m-et)
          Length = 360

 Score = 28.9 bits (63), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 96/243 (39%), Gaps = 25/243 (10%)

Query: 28  MALKSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAH 87
           M +++A  LRL D  H      T+  LA+  ++  P+     +L R++R LV  G+    
Sbjct: 34  MVVRTAATLRLVD--HILAGARTVKALAARTDTR-PE-----ALLRLIRHLVAIGLL--- 82

Query: 88  RSSDGSEETMYGLTQISKWLLRDSEMS-LAPMILFQNSQLLQAPCHHLSQCVEEGGHAFK 146
              D   E  +  T++ + L  D   +  A   L Q           L   +  G   ++
Sbjct: 83  -EEDAPGE--FVPTEVGELLADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGRPTYE 139

Query: 147 KAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEE 206
             +G   ++               +AC   +      + Y   +  +R ++DVGGG G  
Sbjct: 140 SIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD--WTNVRHVLDVGGGKGGF 197

Query: 207 LAEIVEFYPHIKGVNFDLPHVVATAPVY---EGVSH----VGGDMLNAVP-NADAVFMKV 258
            A I    PH+     ++   V TA  Y   EG+S     V GD    +P  ADA+ +  
Sbjct: 198 AAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSF 257

Query: 259 IVL 261
           ++L
Sbjct: 258 VLL 260


>pdb|3GM8|A Chain A, Crystal Structure Of A Beta-glycosidase From Bacteroides
           Vulgatus
          Length = 801

 Score = 28.1 bits (61), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 202 GTGEELAEIVEF---YPHIKGVNFDLPHVVATAPVY 234
           G GEE+ E+  F   YP +  +  ++PH   T  VY
Sbjct: 450 GNGEEIGELEHFHKNYPTLCAIATEVPHTYQTRGVY 485


>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
           In Complex With S-Adenosyl-L-Methionine (Sam) And
           11-Deoxy- Beta-Rhodomycin (Dbra)
 pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
           In Complex With S-Adenosyl-L-Methionine (Sam) And
           11-Deoxy- Beta-Rhodomycin (Dbra)
 pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
           In Complex With Sinefungin (Sfg)
          Length = 374

 Score = 27.7 bits (60), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 10/136 (7%)

Query: 134 LSQCVEEGGHAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGI 193
           L   V  G  A+   +G   W+                +C   +        Y   +  +
Sbjct: 126 LLDVVRTGRPAYAGRYGRPFWEDLSADVALADSFDALXSCDEDLAYEAPADAYD--WSAV 183

Query: 194 RSLVDVGGGTGEELAEIVEFYPHIKGVNFDLP-------HVVATAPVYEGVSHVGGDMLN 246
           R ++DVGGG G  LA I    PH++G   +L           A A + + V+   GD   
Sbjct: 184 RHVLDVGGGNGGXLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFK 243

Query: 247 AVP-NADAVFMKVIVL 261
            +P  AD V +  ++L
Sbjct: 244 PLPVTADVVLLSFVLL 259


>pdb|3BBN|B Chain B, Homology Model For The Spinach Chloroplast 30s Subunit
          Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
          Length = 231

 Score = 27.3 bits (59), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 45 HGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSDGSEETMYG 99
          HG+    P+++  I++ C  +HII +LTR  R L          SS G +  + G
Sbjct: 18 HGTRKWNPRMSPYISAKCKGIHII-NLTRTARFLSEACDLVFDASSRGKQFLIVG 71


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.323    0.135    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,399,276
Number of Sequences: 62578
Number of extensions: 278391
Number of successful extensions: 655
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 612
Number of HSP's gapped (non-prelim): 24
length of query: 266
length of database: 14,973,337
effective HSP length: 97
effective length of query: 169
effective length of database: 8,903,271
effective search space: 1504652799
effective search space used: 1504652799
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)